-
1
-
-
0036845709
-
Glycolysis in wonderland: the importance of energy dissipation in metabolic pathways
-
Aledo JC, del Valle AE (2002) Glycolysis in wonderland: the importance of energy dissipation in metabolic pathways. J Chem Educ 79: 1336.
-
(2002)
J Chem Educ
, vol.79
, pp. 1336
-
-
Aledo, J.C.1
del Valle, A.E.2
-
2
-
-
35248836864
-
Switching between cooperation and competition in the use of extracellular glucose
-
Aledo JC, Pérez-Claros JA, del Valle AE (2007) Switching between cooperation and competition in the use of extracellular glucose. J Mol Evol 65: 328-339.
-
(2007)
J Mol Evol
, vol.65
, pp. 328-339
-
-
Aledo, J.C.1
Pérez-Claros, J.A.2
del Valle, A.E.3
-
3
-
-
82755166890
-
Inhibition of pyruvate kinase M2 by reactive oxygen species contributes to cellular antioxidant responses
-
Anastasiou D, Poulogiannis G, Asara JM et al (2011) Inhibition of pyruvate kinase M2 by reactive oxygen species contributes to cellular antioxidant responses. Science 334: 1278-1283.
-
(2011)
Science
, vol.334
, pp. 1278-1283
-
-
Anastasiou, D.1
Poulogiannis, G.2
Asara, J.M.3
-
6
-
-
34547887655
-
Intracellular crowding defines the mode and sequence of substrate uptake by Escherichia coli and constrains its metabolic activity
-
Beg QK, Vazquez A, Ernst J et al (2007) Intracellular crowding defines the mode and sequence of substrate uptake by Escherichia coli and constrains its metabolic activity. Proc Natl Acad Sci USA 104: 12663-12668.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 12663-12668
-
-
Beg, Q.K.1
Vazquez, A.2
Ernst, J.3
-
7
-
-
33748101074
-
Systematic screening of all signal peptides from Bacillus subtilis: a powerful strategy in optimizing heterologous protein secretion in Gram-positive bacteria
-
Brockmeier U, Caspers M, Freudl R et al (2006) Systematic screening of all signal peptides from Bacillus subtilis: a powerful strategy in optimizing heterologous protein secretion in Gram-positive bacteria. J Mol Biol 362: 393-402.
-
(2006)
J Mol Biol
, vol.362
, pp. 393-402
-
-
Brockmeier, U.1
Caspers, M.2
Freudl, R.3
-
8
-
-
34347387832
-
Restriction of DNA replication to the reductive phase of the metabolic cycle protects genome integrity
-
Chen Z, Odstrcil EA, Tu BP, McKnight SL (2007) Restriction of DNA replication to the reductive phase of the metabolic cycle protects genome integrity. Science 316: 1916-1919.
-
(2007)
Science
, vol.316
, pp. 1916-1919
-
-
Chen, Z.1
Odstrcil, E.A.2
Tu, B.P.3
McKnight, S.L.4
-
9
-
-
0022066386
-
Feast/famine growth environments and activated sludge population selection
-
Chiesa SC, Irvine RL, Manning JF Jr (1985) Feast/famine growth environments and activated sludge population selection. Biotechnol Bioeng 27: 562-568.
-
(1985)
Biotechnol Bioeng
, vol.27
, pp. 562-568
-
-
Chiesa, S.C.1
Irvine, R.L.2
Manning Jr., J.F.3
-
11
-
-
35648972123
-
The fluxes through glycolytic enzymes in Saccharomyces cerevisiae are predominantly regulated at posttranscriptional levels
-
Daran-Lapujade P, Rossell S, van Gulik WM et al (2007) The fluxes through glycolytic enzymes in Saccharomyces cerevisiae are predominantly regulated at posttranscriptional levels. Proc Natl Acad Sci USA 104: 15753-15758.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 15753-15758
-
-
Daran-Lapujade, P.1
Rossell, S.2
van Gulik, W.M.3
-
12
-
-
23144432213
-
Optimality and evolutionary tuning of the expression level of a protein
-
Dekel E, Alon U (2005) Optimality and evolutionary tuning of the expression level of a protein. Nature 436: 588-592.
-
(2005)
Nature
, vol.436
, pp. 588-592
-
-
Dekel, E.1
Alon, U.2
-
13
-
-
79953684503
-
The Warburg and Crabtree effects: on the origin of cancer cell energy metabolism and of yeast glucose repression
-
Diaz-Ruiz R, Rigoulet M, Devin A (2011) The Warburg and Crabtree effects: on the origin of cancer cell energy metabolism and of yeast glucose repression. Biochim Biophys Acta 1807: 568-576.
-
(2011)
Biochim Biophys Acta
, vol.1807
, pp. 568-576
-
-
Diaz-Ruiz, R.1
Rigoulet, M.2
Devin, A.3
-
14
-
-
49549120655
-
Improvement of Saccharomyces yeast strains used in brewing, wine making and baking
-
Donalies UEB, Nguyen HTT, Stahl U, Nevoigt E (2008) Improvement of Saccharomyces yeast strains used in brewing, wine making and baking. Adv Biochem Eng Biotechnol 111: 67-98.
-
(2008)
Adv Biochem Eng Biotechnol
, vol.111
, pp. 67-98
-
-
Donalies, U.E.B.1
Nguyen, H.T.T.2
Stahl, U.3
Nevoigt, E.4
-
15
-
-
84868359261
-
Regulation, transport aspects and degeneration of penicillin biosynthesis in Penicillium chrysogenum
-
Douma RD (2010) Regulation, transport aspects and degeneration of penicillin biosynthesis in Penicillium chrysogenum. Delft University of Technology.
-
(2010)
Delft University of Technology
-
-
Douma, R.D.1
-
16
-
-
0035125986
-
In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data
-
Edwards JS, Ibarra RU, Palsson BO (2001) In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data. Nat Biotechnol 19: 125-130.
-
(2001)
Nat Biotechnol
, vol.19
, pp. 125-130
-
-
Edwards, J.S.1
Ibarra, R.U.2
Palsson, B.O.3
-
17
-
-
65249173472
-
Carbon catabolite control of the metabolic network in Bacillus subtilis
-
Fujita Y (2009) Carbon catabolite control of the metabolic network in Bacillus subtilis. Biosci Biotechnol Biochem 73: 245-259.
-
(2009)
Biosci Biotechnol Biochem
, vol.73
, pp. 245-259
-
-
Fujita, Y.1
-
18
-
-
8144228566
-
Why do cancers have high aerobic glycolysis?
-
Gatenby RA, Gillies RJ (2004) Why do cancers have high aerobic glycolysis? Nat Rev Cancer 4: 891-899.
-
(2004)
Nat Rev Cancer
, vol.4
, pp. 891-899
-
-
Gatenby, R.A.1
Gillies, R.J.2
-
20
-
-
35448940364
-
Adaptive landscapes and emergent phenotypes: why do cancers have high glycolysis?
-
Gillies RJ, Gatenby RA (2007) Adaptive landscapes and emergent phenotypes: why do cancers have high glycolysis? J Bioenergy Biomembr 39: 251-257.
-
(2007)
J Bioenergy Biomembr
, vol.39
, pp. 251-257
-
-
Gillies, R.J.1
Gatenby, R.A.2
-
21
-
-
46749121459
-
Causes and consequences of increased glucose metabolism of cancers
-
Gillies RJ, Robey I, Gatenby RA (2008) Causes and consequences of increased glucose metabolism of cancers. J Nucl Med 49(Suppl 2): 24S-42S.
-
(2008)
J Nucl Med
, vol.49
, Issue.SUPPL. 2
-
-
Gillies, R.J.1
Robey, I.2
Gatenby, R.A.3
-
22
-
-
66149108283
-
Snowdrift game dynamics and facultative cheating in yeast
-
Gore J, Youk H, van Oudenaarden A (2009) Snowdrift game dynamics and facultative cheating in yeast. Nature 459: 253-256.
-
(2009)
Nature
, vol.459
, pp. 253-256
-
-
Gore, J.1
Youk, H.2
van Oudenaarden, A.3
-
23
-
-
79952284127
-
Hallmarks of cancer: the next generation
-
Hanahan D, Weinberg RA (2011) Hallmarks of cancer: the next generation. Cell 144: 646-674.
-
(2011)
Cell
, vol.144
, pp. 646-674
-
-
Hanahan, D.1
Weinberg, R.A.2
-
24
-
-
0025923478
-
Mathematical analysis of enzymic reaction systems using optimization principles
-
Heinrich R, Schuster S, Holzhütter HG (1991) Mathematical analysis of enzymic reaction systems using optimization principles. Eur J Biochem 201: 1-21.
-
(1991)
Eur J Biochem
, vol.201
, pp. 1-21
-
-
Heinrich, R.1
Schuster, S.2
Holzhütter, H.G.3
-
25
-
-
33947694781
-
Natural products of filamentous fungi: enzymes, genes, and their regulation
-
Hoffmeister D, Keller NP (2007) Natural products of filamentous fungi: enzymes, genes, and their regulation. Nat Prod Rep 24: 393-416.
-
(2007)
Nat Prod Rep
, vol.24
, pp. 393-416
-
-
Hoffmeister, D.1
Keller, N.P.2
-
26
-
-
0017208520
-
Effect of specific growth rate and glucose concentration on growth and glucose metabolism of Escherichia coli K-12
-
Hollywood N, Doelle HW (1976) Effect of specific growth rate and glucose concentration on growth and glucose metabolism of Escherichia coli K-12. Microbios 17: 23-33.
-
(1976)
Microbios
, vol.17
, pp. 23-33
-
-
Hollywood, N.1
Doelle, H.W.2
-
27
-
-
0032879297
-
Acetate utilization in Lactococcus lactis deficient in lactate dehydrogenase: a rescue pathway for maintaining redox balance
-
Hols P, Ramos A, Hugenholtz J et al (1999) Acetate utilization in Lactococcus lactis deficient in lactate dehydrogenase: a rescue pathway for maintaining redox balance. J Bacteriol 181: 5521-5526.
-
(1999)
J Bacteriol
, vol.181
, pp. 5521-5526
-
-
Hols, P.1
Ramos, A.2
Hugenholtz, J.3
-
28
-
-
84857051751
-
A flux-sensing mechanism could regulate the switch between respiration and fermentation
-
Huberts DHEW, Niebel B, Heinemann M (2012) A flux-sensing mechanism could regulate the switch between respiration and fermentation. FEMS Yeast Res 12: 118-128.
-
(2012)
FEMS Yeast Res
, vol.12
, pp. 118-128
-
-
Huberts, D.H.E.W.1
Niebel, B.2
Heinemann, M.3
-
29
-
-
0037079023
-
Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
-
Ibarra RU, Edwards JS, Palsson BO (2002) Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth. Nature 420: 186-189.
-
(2002)
Nature
, vol.420
, pp. 186-189
-
-
Ibarra, R.U.1
Edwards, J.S.2
Palsson, B.O.3
-
30
-
-
31144476958
-
Towards bacterial strains overproducing l-tryptophan and other aromatics by metabolic engineering
-
Ikeda M (2006) Towards bacterial strains overproducing l-tryptophan and other aromatics by metabolic engineering. Appl Microbiol Biotechnol 69: 615-626.
-
(2006)
Appl Microbiol Biotechnol
, vol.69
, pp. 615-626
-
-
Ikeda, M.1
-
31
-
-
0035380714
-
Metabolic behavior of Lactococcus lactis MG1363 in microaerobic continuous cultivation at a low dilution rate
-
Jensen NB, Melchiorsen CR, Jokumsen KV, Villadsen J (2001) Metabolic behavior of Lactococcus lactis MG1363 in microaerobic continuous cultivation at a low dilution rate. Appl Environ Microbiol 67: 2677-2682.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 2677-2682
-
-
Jensen, N.B.1
Melchiorsen, C.R.2
Jokumsen, K.V.3
Villadsen, J.4
-
32
-
-
77951107086
-
Synthetic biology: applications come of age
-
Khalil AS, Collins JJ (2010) Synthetic biology: applications come of age. Nat Rev Genet 11: 367-379.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 367-379
-
-
Khalil, A.S.1
Collins, J.J.2
-
33
-
-
0001123775
-
Utilization of the salts of organic acids by the colon-aerogenes group
-
Koser SA (1923) Utilization of the salts of organic acids by the colon-aerogenes group. J Bacteriol 8: 493-520.
-
(1923)
J Bacteriol
, vol.8
, pp. 493-520
-
-
Koser, S.A.1
-
34
-
-
77949385752
-
Bacterial adaptation through distributed sensing of metabolic fluxes
-
Kotte O, Zaugg JB, Heinemann M (2010) Bacterial adaptation through distributed sensing of metabolic fluxes. Mol Syst Biol 6: 355.
-
(2010)
Mol Syst Biol
, vol.6
, pp. 355
-
-
Kotte, O.1
Zaugg, J.B.2
Heinemann, M.3
-
35
-
-
34247334638
-
Regulation of sugar catabolism in Lactococcus lactis
-
Kowalczyk M, Bardowski J (2007) Regulation of sugar catabolism in Lactococcus lactis. Crit Rev Microbiol 33: 1-13.
-
(2007)
Crit Rev Microbiol
, vol.33
, pp. 1-13
-
-
Kowalczyk, M.1
Bardowski, J.2
-
37
-
-
4444233112
-
Biofilms promote altruism
-
Kreft J-U (2004) Biofilms promote altruism. Microbiology 150: 2751-2760.
-
(2004)
Microbiology
, vol.150
, pp. 2751-2760
-
-
Kreft, J.-U.1
-
38
-
-
79960414910
-
Systems metabolic engineering for chemicals and materials
-
Lee JW, Kim TY, Jang Y-S et al (2011) Systems metabolic engineering for chemicals and materials. Trends Biotechnol 29: 370-378.
-
(2011)
Trends Biotechnol
, vol.29
, pp. 370-378
-
-
Lee, J.W.1
Kim, T.Y.2
Jang, Y.-S.3
-
39
-
-
28344455644
-
Biotechnological production of amino acids and derivatives: current status and prospects
-
Leuchtenberger W, Huthmacher K, Drauz K (2005) Biotechnological production of amino acids and derivatives: current status and prospects. Appl Microbiol Biotechnol 69: 1-8.
-
(2005)
Appl Microbiol Biotechnol
, vol.69
, pp. 1-8
-
-
Leuchtenberger, W.1
Huthmacher, K.2
Drauz, K.3
-
40
-
-
84859103859
-
Role of phosphate in the central metabolism of two lactic acid bacteria-a comparative systems biology approach
-
Levering J, Musters MWJM, Bekker M et al (2012) Role of phosphate in the central metabolism of two lactic acid bacteria-a comparative systems biology approach. FEBS J 279: 1274-1290.
-
(2012)
FEBS J
, vol.279
, pp. 1274-1290
-
-
Levering, J.1
Musters, M.W.J.M.2
Bekker, M.3
-
41
-
-
77954683888
-
Engineering mammalian cells in bioprocessing-current achievements and future perspectives
-
Lim Y, Wong NSC, Lee YY et al (2010) Engineering mammalian cells in bioprocessing-current achievements and future perspectives. Biotechnol Appl Biochem 55: 175-189.
-
(2010)
Biotechnol Appl Biochem
, vol.55
, pp. 175-189
-
-
Lim, Y.1
Wong, N.S.C.2
Lee, Y.Y.3
-
42
-
-
0022993292
-
Role of Streptococcus mutans in human dental decay
-
Loesche WJ (1986) Role of Streptococcus mutans in human dental decay. Microbiol Rev 50: 353-380.
-
(1986)
Microbiol Rev
, vol.50
, pp. 353-380
-
-
Loesche, W.J.1
-
43
-
-
47149099785
-
The tragedy of the commons in microbial populations: insights from theoretical, comparative and experimental studies
-
MacLean RC (2008) The tragedy of the commons in microbial populations: insights from theoretical, comparative and experimental studies. Heredity 100: 471-477.
-
(2008)
Heredity
, vol.100
, pp. 471-477
-
-
MacLean, R.C.1
-
44
-
-
33745310267
-
Resource competition and social conflict in experimental populations of yeast
-
MacLean RC, Gudelj I (2006) Resource competition and social conflict in experimental populations of yeast. Nature 441: 498-501.
-
(2006)
Nature
, vol.441
, pp. 498-501
-
-
MacLean, R.C.1
Gudelj, I.2
-
45
-
-
79951771512
-
Aspergillus as a multi-purpose cell factory: current status and perspectives
-
Meyer V, Wu B, Ram AFJ (2011) Aspergillus as a multi-purpose cell factory: current status and perspectives. Biotechnol Lett 33: 469-476.
-
(2011)
Biotechnol Lett
, vol.33
, pp. 469-476
-
-
Meyer, V.1
Wu, B.2
Ram, A.F.J.3
-
46
-
-
75549087930
-
BioNumbers-the database of key numbers in molecular and cell biology
-
Milo R, Jorgensen P, Moran U et al (2010) BioNumbers-the database of key numbers in molecular and cell biology. Nucleic Acids Res 38: D750-D753.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Milo, R.1
Jorgensen, P.2
Moran, U.3
-
48
-
-
23944486891
-
Overview on sugar metabolism and its control in Lactococcus lactis-the input from in vivo NMR
-
Neves AR, Pool WA, Kok J et al (2005) Overview on sugar metabolism and its control in Lactococcus lactis-the input from in vivo NMR. FEMS Microbiol Rev 29: 531-554.
-
(2005)
FEMS Microbiol Rev
, vol.29
, pp. 531-554
-
-
Neves, A.R.1
Pool, W.A.2
Kok, J.3
-
49
-
-
51949107835
-
Progress in metabolic engineering of Saccharomyces cerevisiae
-
Nevoigt E (2008) Progress in metabolic engineering of Saccharomyces cerevisiae. Microbiol Mol Biol Rev 72: 379-412.
-
(2008)
Microbiol Mol Biol Rev
, vol.72
, pp. 379-412
-
-
Nevoigt, E.1
-
51
-
-
77953140616
-
Metabolic pathways and fermentative production of l-aspartate family amino acids
-
Park JH, Lee SY (2010) Metabolic pathways and fermentative production of l-aspartate family amino acids. Biotechnol J 5: 560-577.
-
(2010)
Biotechnol J
, vol.5
, pp. 560-577
-
-
Park, J.H.1
Lee, S.Y.2
-
52
-
-
0035917865
-
Cooperation and competition in the evolution of ATP-producing pathways
-
Pfeiffer T, Schuster S, Bonhoeffer S (2001) Cooperation and competition in the evolution of ATP-producing pathways. Science 292: 504-507.
-
(2001)
Science
, vol.292
, pp. 504-507
-
-
Pfeiffer, T.1
Schuster, S.2
Bonhoeffer, S.3
-
53
-
-
33645862582
-
How did Saccharomyces evolve to become a good brewer?
-
Piskur J, Rozpedowska E, Polakova S et al (2006) How did Saccharomyces evolve to become a good brewer? Trends Genet 22: 183-186.
-
(2006)
Trends Genet
, vol.22
, pp. 183-186
-
-
Piskur, J.1
Rozpedowska, E.2
Polakova, S.3
-
54
-
-
77956107104
-
Heterologous protein secretion by Bacillus species from the cradle to the grave
-
Pohl S, Harwood CR (2010) Heterologous protein secretion by Bacillus species from the cradle to the grave. Adv Appl Microbiol 73: 1-25.
-
(2010)
Adv Appl Microbiol
, vol.73
, pp. 1-25
-
-
Pohl, S.1
Harwood, C.R.2
-
55
-
-
0024615221
-
Enzymic analysis of the crabtree effect in glucose-limited chemostat cultures of Saccharomyces cerevisiae
-
Postma E, Verduyn C, Scheffers WA, van Dijken JP (1989) Enzymic analysis of the crabtree effect in glucose-limited chemostat cultures of Saccharomyces cerevisiae. Appl Environ Microbiol 55: 468-477.
-
(1989)
Appl Environ Microbiol
, vol.55
, pp. 468-477
-
-
Postma, E.1
Verduyn, C.2
Scheffers, W.A.3
van Dijken, J.P.4
-
56
-
-
0030448870
-
Pyruvate metabolism in Saccharomyces cerevisiae
-
Pronk JT, Yde Steensma H, van Dijken JP (1996) Pyruvate metabolism in Saccharomyces cerevisiae. Yeast 12: 1607-1633.
-
(1996)
Yeast
, vol.12
, pp. 1607-1633
-
-
Pronk, J.T.1
de Steensma, H.Y.2
van Dijken, J.P.3
-
57
-
-
0028267405
-
Large-scale mammalian cell culture
-
Reiter M, Blüml G (1994) Large-scale mammalian cell culture. Curr Opin Biotechnol 5: 175-179.
-
(1994)
Curr Opin Biotechnol
, vol.5
, pp. 175-179
-
-
Reiter, M.1
Blüml, G.2
-
58
-
-
80053085147
-
A practical guide to genome-scale metabolic models and their analysis
-
Santos F, Boele J, Teusink B (2011) A practical guide to genome-scale metabolic models and their analysis. Methods Enzymol 500: 509-532.
-
(2011)
Methods Enzymol
, vol.500
, pp. 509-532
-
-
Santos, F.1
Boele, J.2
Teusink, B.3
-
59
-
-
17644375240
-
The PEP-pyruvate-oxaloacetate node as the switch point for carbon flux distribution in bacteria
-
Sauer U, Eikmanns BJ (2005) The PEP-pyruvate-oxaloacetate node as the switch point for carbon flux distribution in bacteria. FEMS Microbiol Rev 29: 765-794.
-
(2005)
FEMS Microbiol Rev
, vol.29
, pp. 765-794
-
-
Sauer, U.1
Eikmanns, B.J.2
-
60
-
-
84860487758
-
Multidimensional optimality of microbial metabolism
-
Schuetz R, Zamboni N, Zampieri M et al (2012) Multidimensional optimality of microbial metabolism. Science 336: 601-604.
-
(2012)
Science
, vol.336
, pp. 601-604
-
-
Schuetz, R.1
Zamboni, N.2
Zampieri, M.3
-
61
-
-
43449132092
-
Is maximization of molar yield in metabolic networks favoured by evolution?
-
Schuster S, Pfeiffer T, Fell DA (2008) Is maximization of molar yield in metabolic networks favoured by evolution? J Theor Biol 252: 497-504.
-
(2008)
J Theor Biol
, vol.252
, pp. 497-504
-
-
Schuster, S.1
Pfeiffer, T.2
Fell, D.A.3
-
62
-
-
77954693417
-
Cooperation and cheating in microbial exoenzyme production-theoretical analysis for biotechnological applications
-
Schuster S, Kreft J-U, Brenner N et al (2010) Cooperation and cheating in microbial exoenzyme production-theoretical analysis for biotechnological applications. Biotechnol J 5: 751-758.
-
(2010)
Biotechnol J
, vol.5
, pp. 751-758
-
-
Schuster, S.1
Kreft, J.-U.2
Brenner, N.3
-
63
-
-
77953115788
-
Cost of unneeded proteins in E. coli is reduced after several generations in exponential growth
-
Shachrai I, Zaslaver A, Alon U, Dekel E (2010) Cost of unneeded proteins in E. coli is reduced after several generations in exponential growth. Mol Cell 38: 758-767.
-
(2010)
Mol Cell
, vol.38
, pp. 758-767
-
-
Shachrai, I.1
Zaslaver, A.2
Alon, U.3
Dekel, E.4
-
64
-
-
84900876257
-
Glucose and acetate metabolism in E. coli-system level analysis and biotechnological applications in protein production processes
-
S. Y. Lee (Ed.), Dordrecht: Springer Netherlands
-
Shiloach J, Rinas U (2009) Glucose and acetate metabolism in E. coli-system level analysis and biotechnological applications in protein production processes. In: Lee SY (ed) Systems biology and biotechnology of Escherichia coli. Springer Netherlands, Dordrecht, pp 377-400.
-
(2009)
Systems Biology and Biotechnology of Escherichia Coli
, pp. 377-400
-
-
Shiloach, J.1
Rinas, U.2
-
65
-
-
84959229752
-
Vitamins and related compounds: microbial production
-
2nd edn., H.-J. Rehm and G. Reed (Eds.), Weinheim: Wiley-VCH Verlag GmbH
-
Shimizu S (2008) Vitamins and related compounds: microbial production. In: Rehm H-J, Reed G (eds) Biotechnology: special processes, 2nd edn. Wiley-VCH Verlag GmbH, Weinheim, pp 318-340.
-
(2008)
Biotechnology: Special Processes
, pp. 318-340
-
-
Shimizu, S.1
-
66
-
-
79953661070
-
Genome-scale metabolic modeling elucidates the role of proliferative adaptation in causing the Warburg effect
-
Shlomi T, Benyamini T, Gottlieb E et al (2011) Genome-scale metabolic modeling elucidates the role of proliferative adaptation in causing the Warburg effect. PLoS Comput Biol 7: e1002018.
-
(2011)
PLoS Comput Biol
, vol.7
-
-
Shlomi, T.1
Benyamini, T.2
Gottlieb, E.3
-
68
-
-
20444437118
-
Metabolic models for rational improvement of lactic acid bacteria as cell factories
-
Smid EJ, van Enckevort FJH, Wegkamp A et al (2005) Metabolic models for rational improvement of lactic acid bacteria as cell factories. J Appl Microbiol 98: 1326-1331.
-
(2005)
J Appl Microbiol
, vol.98
, pp. 1326-1331
-
-
Smid, E.J.1
van Enckevort, F.J.H.2
Wegkamp, A.3
-
69
-
-
0002931173
-
Effects of growth conditions on carbon utilization and organic by-product formation in B. subtilis
-
Snay J, Jeong JW, Ataai MM (1989) Effects of growth conditions on carbon utilization and organic by-product formation in B. subtilis. Biotechnol Progr 5: 63-69.
-
(1989)
Biotechnol Progr
, vol.5
, pp. 63-69
-
-
Snay, J.1
Jeong, J.W.2
Ataai, M.M.3
-
70
-
-
36248971737
-
Control of key metabolic intersections in Bacillus subtilis
-
Sonenshein AL (2007) Control of key metabolic intersections in Bacillus subtilis. Nat Rev Microbiol 5: 917-927.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 917-927
-
-
Sonenshein, A.L.1
-
71
-
-
0015813653
-
Control of metabolite secretion in Bacillus subtilis
-
Speck EL, Freese E (1973) Control of metabolite secretion in Bacillus subtilis. J Gen Microbiol 78: 261-275.
-
(1973)
J Gen Microbiol
, vol.78
, pp. 261-275
-
-
Speck, E.L.1
Freese, E.2
-
72
-
-
45149128433
-
The cost of expression of Escherichia coli lac operon proteins is in the process, not in the products
-
Stoebel DM, Dean AM, Dykhuizen DE (2008) The cost of expression of Escherichia coli lac operon proteins is in the process, not in the products. Genetics 178: 1653-1660.
-
(2008)
Genetics
, vol.178
, pp. 1653-1660
-
-
Stoebel, D.M.1
Dean, A.M.2
Dykhuizen, D.E.3
-
73
-
-
33947276100
-
Metabolic modeling of a mutualistic microbial community
-
Stolyar S, van Dien S, Hillesland KL et al (2007) Metabolic modeling of a mutualistic microbial community. Mol Syst Biol 3: 92.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 92
-
-
Stolyar, S.1
van Dien, S.2
Hillesland, K.L.3
-
74
-
-
0033759266
-
Regulation of carbon catabolism in Bacillus species
-
Stülke J, Hillen W (2000) Regulation of carbon catabolism in Bacillus species. Annu Rev Microbiol 54: 849-880.
-
(2000)
Annu Rev Microbiol
, vol.54
, pp. 849-880
-
-
Stülke, J.1
Hillen, W.2
-
75
-
-
33644990621
-
Sources, properties and suitability of new thermostable enzymes in food processing
-
Synowiecki J, Grzybowska B, Zdziebło A (2006) Sources, properties and suitability of new thermostable enzymes in food processing. Crit Rev Food Sci Nutr 46: 197-205.
-
(2006)
Crit Rev Food Sci Nutr
, vol.46
, pp. 197-205
-
-
Synowiecki, J.1
Grzybowska, B.2
Zdziebło, A.3
-
76
-
-
31344432121
-
Modelling strategies for the industrial exploitation of lactic acid bacteria
-
Teusink B, Smid EJ (2006) Modelling strategies for the industrial exploitation of lactic acid bacteria. Nat Rev Microbiol 4: 46-56.
-
(2006)
Nat Rev Microbiol
, vol.4
, pp. 46-56
-
-
Teusink, B.1
Smid, E.J.2
-
77
-
-
33846015888
-
Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model
-
Teusink B, Wiersma A, Molenaar D et al (2006) Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model. J Biol Chem 281: 40041-40048.
-
(2006)
J Biol Chem
, vol.281
, pp. 40041-40048
-
-
Teusink, B.1
Wiersma, A.2
Molenaar, D.3
-
78
-
-
67650904950
-
Understanding the adaptive growth strategy of Lactobacillus plantarum by in silico optimisation
-
Teusink B, Wiersma A, Jacobs L et al (2009) Understanding the adaptive growth strategy of Lactobacillus plantarum by in silico optimisation. PLoS Comput Biol 5: e1000410.
-
(2009)
PLoS Comput Biol
, vol.5
-
-
Teusink, B.1
Wiersma, A.2
Jacobs, L.3
-
79
-
-
0018357964
-
Change from homo- to heterolactic fermentation by Streptococcus lactis resulting from glucose limitation in anaerobic chemostat cultures
-
Thomas TD, Ellwood DC, Longyear VM (1979) Change from homo- to heterolactic fermentation by Streptococcus lactis resulting from glucose limitation in anaerobic chemostat cultures. J Bacteriol 138: 109-117.
-
(1979)
J Bacteriol
, vol.138
, pp. 109-117
-
-
Thomas, T.D.1
Ellwood, D.C.2
Longyear, V.M.3
-
80
-
-
80054115962
-
A computational exploration of bacterial metabolic diversity identifying metabolic interactions and growth-efficient strain communities
-
Tzamali E, Poirazi P, Tollis IG, Reczko M (2011) A computational exploration of bacterial metabolic diversity identifying metabolic interactions and growth-efficient strain communities. BMC Syst Biol 5: 167.
-
(2011)
BMC Syst Biol
, vol.5
, pp. 167
-
-
Tzamali, E.1
Poirazi, P.2
Tollis, I.G.3
Reczko, M.4
-
82
-
-
0031015810
-
Importance of bacterial storage polymers in bioprocesses
-
van Loosdrecht M, Pot M, Heijnen J (1997) Importance of bacterial storage polymers in bioprocesses. Water Sci Technol 35: 41-47.
-
(1997)
Water Sci Technol
, vol.35
, pp. 41-47
-
-
van Loosdrecht, M.1
Pot, M.2
Heijnen, J.3
-
83
-
-
0027223982
-
Stoichiometric interpretation of Escherichia coli glucose catabolism under various oxygenation rates
-
Varma A, Boesch BW, Palsson BO (1993) Stoichiometric interpretation of Escherichia coli glucose catabolism under various oxygenation rates. Appl Environ Microbiol 59: 2465-2473.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 2465-2473
-
-
Varma, A.1
Boesch, B.W.2
Palsson, B.O.3
-
84
-
-
77951803596
-
Catabolic efficiency of aerobic glycolysis: the Warburg effect revisited
-
Vazquez A, Liu J, Zhou Y, Oltvai ZN (2010) Catabolic efficiency of aerobic glycolysis: the Warburg effect revisited. BMC Syst Biol 4: 58.
-
(2010)
BMC Syst Biol
, vol.4
, pp. 58
-
-
Vazquez, A.1
Liu, J.2
Zhou, Y.3
Oltvai, Z.N.4
-
85
-
-
33646578756
-
Overflow metabolism in Escherichia coli during steady-state growth: transcriptional regulation and effect of the redox ratio
-
Vemuri GN, Altman E, Sangurdekar DP et al (2006) Overflow metabolism in Escherichia coli during steady-state growth: transcriptional regulation and effect of the redox ratio. Appl Environ Microbiol 72: 3653-3661.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 3653-3661
-
-
Vemuri, G.N.1
Altman, E.2
Sangurdekar, D.P.3
-
86
-
-
33847785682
-
Increasing NADH oxidation reduces overflow metabolism in Saccharomyces cerevisiae
-
Vemuri GN, Eiteman MA, McEwen JE et al (2007) Increasing NADH oxidation reduces overflow metabolism in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 104: 2402-2407.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 2402-2407
-
-
Vemuri, G.N.1
Eiteman, M.A.2
McEwen, J.E.3
-
87
-
-
0037929694
-
Metabolic engineering of apoptosis in cultured animal cells: implications for the biotechnology industry
-
Vives J, Juanola S, Cairó JJ, Gòdia F (2003) Metabolic engineering of apoptosis in cultured animal cells: implications for the biotechnology industry. Metab Eng 5: 124-132.
-
(2003)
Metab Eng
, vol.5
, pp. 124-132
-
-
Vives, J.1
Juanola, S.2
Cairó, J.J.3
Gòdia, F.4
-
88
-
-
0031441724
-
Optimization of glycolysis: a new look at the efficiency of energy coupling
-
Waddell TG, Repovic P, Melendez-Hevia E et al (1997) Optimization of glycolysis: a new look at the efficiency of energy coupling. Biochem Educ 25: 204-205.
-
(1997)
Biochem Educ
, vol.25
, pp. 204-205
-
-
Waddell, T.G.1
Repovic, P.2
Melendez-Hevia, E.3
-
89
-
-
20644462160
-
Bioprocessing strategies to improve heterologous protein production in filamentous fungal fermentations
-
Wang L, Ridgway D, Gu T, Moo-Young M (2005) Bioprocessing strategies to improve heterologous protein production in filamentous fungal fermentations. Biotechnol Adv 23: 115-129.
-
(2005)
Biotechnol Adv
, vol.23
, pp. 115-129
-
-
Wang, L.1
Ridgway, D.2
Gu, T.3
Moo-Young, M.4
-
90
-
-
12444279265
-
On the origin of cancer cells
-
Warburg O (1956) On the origin of cancer cells. Science 123: 309-314.
-
(1956)
Science
, vol.123
, pp. 309-314
-
-
Warburg, O.1
-
91
-
-
79960610255
-
Optimal regulatory strategies for metabolic pathways in Escherichia coli depending on protein costs
-
Wessely F, Bartl M, Guthke R et al (2011) Optimal regulatory strategies for metabolic pathways in Escherichia coli depending on protein costs. Mol Syst Biol 7: 515.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 515
-
-
Wessely, F.1
Bartl, M.2
Guthke, R.3
-
93
-
-
78751584992
-
Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments
-
Zhuang K, Izallalen M, Mouser P et al (2011a) Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments. ISME J 5: 305-316.
-
(2011)
ISME J
, vol.5
, pp. 305-316
-
-
Zhuang, K.1
Izallalen, M.2
Mouser, P.3
-
94
-
-
79959610766
-
Economics of membrane occupancy and respiro-fermentation
-
Zhuang K, Vemuri GN, Mahadevan R (2011b) Economics of membrane occupancy and respiro-fermentation. Mol Syst Biol 7: 500.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 500
-
-
Zhuang, K.1
Vemuri, G.N.2
Mahadevan, R.3
-
95
-
-
84861180223
-
OptCom: a multi-Level optimization framework for the metabolic modeling and analysis of microbial communities
-
Zomorrodi AR, Maranas CD (2012) OptCom: a multi-Level optimization framework for the metabolic modeling and analysis of microbial communities. PLoS Comput Biol 8: e1002363.
-
(2012)
PLoS Comput Biol
, vol.8
-
-
Zomorrodi, A.R.1
Maranas, C.D.2
|