-
1
-
-
0036845709
-
Glycolysis in wonderland. The importance of energy dissipation in metabolic pathways
-
Aledo J.C., and del Valle A.E. Glycolysis in wonderland. The importance of energy dissipation in metabolic pathways. J. Chem. Educ. 79 (2002) 1336-1339
-
(2002)
J. Chem. Educ.
, vol.79
, pp. 1336-1339
-
-
Aledo, J.C.1
del Valle, A.E.2
-
2
-
-
11244291060
-
The ATP paradox is the expression of an economizing fuel mechanism
-
Aledo J.C., and del Valle A.E. The ATP paradox is the expression of an economizing fuel mechanism. J. Biol. Chem. 279 (2004) 55372-55375
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 55372-55375
-
-
Aledo, J.C.1
del Valle, A.E.2
-
3
-
-
1542288938
-
Global organization of metabolic fluxes in the bacterium Escherichia coli
-
Almaas E., Kovács B., Vicsek T., Oltvai Z.N., and Barabási A.L. Global organization of metabolic fluxes in the bacterium Escherichia coli. Nature 427 (2004) 839-843
-
(2004)
Nature
, vol.427
, pp. 839-843
-
-
Almaas, E.1
Kovács, B.2
Vicsek, T.3
Oltvai, Z.N.4
Barabási, A.L.5
-
5
-
-
0019480612
-
The evolution of cooperation
-
Axelrod R., and Hamilton W.D. The evolution of cooperation. Science 211 (1981) 1390-1396
-
(1981)
Science
, vol.211
, pp. 1390-1396
-
-
Axelrod, R.1
Hamilton, W.D.2
-
6
-
-
0030804853
-
Flux analysis of underdetermined metabolic networks: the quest for the missing constraints
-
Bonarius H.P.J., Schmid G., and Tramper J. Flux analysis of underdetermined metabolic networks: the quest for the missing constraints. Trends Biotechnol. 15 (1997) 308-314
-
(1997)
Trends Biotechnol.
, vol.15
, pp. 308-314
-
-
Bonarius, H.P.J.1
Schmid, G.2
Tramper, J.3
-
7
-
-
18244376808
-
Homeostatic adjustment and metabolic remodeling in glucose-limited yeast cultures
-
Brauer M.J., Saldanha A.J., Dolinski K., and Botstein D. Homeostatic adjustment and metabolic remodeling in glucose-limited yeast cultures. Mol. Biol. Cell. 16 (2005) 2503-2517
-
(2005)
Mol. Biol. Cell.
, vol.16
, pp. 2503-2517
-
-
Brauer, M.J.1
Saldanha, A.J.2
Dolinski, K.3
Botstein, D.4
-
8
-
-
34247256814
-
Flux balance analysis of a genome-scale yeast model constrained by exometabolomic data allows metabolic system identification of genetically different strains
-
Cakir T., Efe C., Dikicioglu D., Hortacsu A., Kirdar B., and Oliver S.G. Flux balance analysis of a genome-scale yeast model constrained by exometabolomic data allows metabolic system identification of genetically different strains. Biotechnol. Prog. 23 (2007) 320-326
-
(2007)
Biotechnol. Prog.
, vol.23
, pp. 320-326
-
-
Cakir, T.1
Efe, C.2
Dikicioglu, D.3
Hortacsu, A.4
Kirdar, B.5
Oliver, S.G.6
-
9
-
-
0008338866
-
Complete set of steady states for the general stoichiometric dynamical system
-
Clarke B.L. Complete set of steady states for the general stoichiometric dynamical system. J. Chem. Phys. 75 (1981) 4970-4979
-
(1981)
J. Chem. Phys.
, vol.75
, pp. 4970-4979
-
-
Clarke, B.L.1
-
10
-
-
0028975995
-
Testing models of non-kin cooperation: mutualism and the Prisoner's Dilemma
-
Clements K.C., and Stephens D.W. Testing models of non-kin cooperation: mutualism and the Prisoner's Dilemma. Anim. Behav. 50 (1995) 527-535
-
(1995)
Anim. Behav.
, vol.50
, pp. 527-535
-
-
Clements, K.C.1
Stephens, D.W.2
-
11
-
-
0020648527
-
Metabolic efficiency: is it a useful concept?
-
Cornish-Bowden A. Metabolic efficiency: is it a useful concept?. Biochem. Soc. Trans. 11 (1983) 44-45
-
(1983)
Biochem. Soc. Trans.
, vol.11
, pp. 44-45
-
-
Cornish-Bowden, A.1
-
12
-
-
33646495327
-
Why is metabolic labour divided in nitrification?
-
Costa E., Pérez J., and Kreft J.U. Why is metabolic labour divided in nitrification?. Trends Microbiol. 14 (2006) 213-219
-
(2006)
Trends Microbiol.
, vol.14
, pp. 213-219
-
-
Costa, E.1
Pérez, J.2
Kreft, J.U.3
-
13
-
-
0034973362
-
Evolutionary optimization of metabolic pathways. Theoretical reconstruction of the stoichiometry of ATP and NADH producing systems
-
Ebenhöh O., and Heinrich R. Evolutionary optimization of metabolic pathways. Theoretical reconstruction of the stoichiometry of ATP and NADH producing systems. Bull. Math. Biol. 63 (2001) 21-55
-
(2001)
Bull. Math. Biol.
, vol.63
, pp. 21-55
-
-
Ebenhöh, O.1
Heinrich, R.2
-
14
-
-
0037342134
-
Stoichiometric design of metabolic networks: multifunctionality, clusters, optimization, weak and strong robustness
-
Ebenhöh O., and Heinrich R. Stoichiometric design of metabolic networks: multifunctionality, clusters, optimization, weak and strong robustness. Bull. Math. Biol. 65 (2003) 323-357
-
(2003)
Bull. Math. Biol.
, vol.65
, pp. 323-357
-
-
Ebenhöh, O.1
Heinrich, R.2
-
15
-
-
0033580813
-
Systems properties of the Haemophilus influenzae Rd metabolic genotype
-
Edwards J.S., and Palsson B.O. Systems properties of the Haemophilus influenzae Rd metabolic genotype. J. Biol. Chem. 274 (1999) 17410-17416
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 17410-17416
-
-
Edwards, J.S.1
Palsson, B.O.2
-
16
-
-
0035125986
-
In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data
-
Edwards J.S., Ibarra R.U., and Palsson B.O. In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data. Nat. Biotechnol. 19 (2001) 125-130
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 125-130
-
-
Edwards, J.S.1
Ibarra, R.U.2
Palsson, B.O.3
-
17
-
-
0037021804
-
Characterizing the metabolic phenotype: a phenotype phase plane analysis
-
Edwards J.S., Ramakrishna R., and Palsson B.O. Characterizing the metabolic phenotype: a phenotype phase plane analysis. Biotechnol. Bioeng. 77 1 (2002) 27-36
-
(2002)
Biotechnol. Bioeng.
, vol.77
, Issue.1
, pp. 27-36
-
-
Edwards, J.S.1
Ramakrishna, R.2
Palsson, B.O.3
-
18
-
-
0344824417
-
Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network
-
Famili I., Förster J., Nielsen J., and Palsson B.O. Saccharomyces cerevisiae phenotypes can be predicted by using constraint-based analysis of a genome-scale reconstructed metabolic network. Proc. Natl. Acad. Sci. USA 100 (2003) 13134-13139
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 13134-13139
-
-
Famili, I.1
Förster, J.2
Nielsen, J.3
Palsson, B.O.4
-
19
-
-
0022493181
-
Fat synthesis in adipose tissue. An examination of stoichiometric constraints
-
Fell D.A., and Small J.R. Fat synthesis in adipose tissue. An examination of stoichiometric constraints. Biochem. J. 238 (1986) 781-786
-
(1986)
Biochem. J.
, vol.238
, pp. 781-786
-
-
Fell, D.A.1
Small, J.R.2
-
20
-
-
20044375201
-
Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism
-
Fischer E., and Sauer U. Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism. Nat. Genet 37 (2005) 636-640
-
(2005)
Nat. Genet
, vol.37
, pp. 636-640
-
-
Fischer, E.1
Sauer, U.2
-
21
-
-
6944224154
-
Metabolic gene-deletion strains of Escherichia coli evolve to computationally predicted growth phenotypes
-
Fong S.S., and Palsson B.O. Metabolic gene-deletion strains of Escherichia coli evolve to computationally predicted growth phenotypes. Nat. Genet 36 (2004) 1056-1058
-
(2004)
Nat. Genet
, vol.36
, pp. 1056-1058
-
-
Fong, S.S.1
Palsson, B.O.2
-
22
-
-
0002804348
-
Glycolysis, pentose phosphate pathway, and Entner-Doudoroff pathway
-
Neidhardt F.C. (Ed), American Society for Microbiology, Washington
-
Fraenkel D. Glycolysis, pentose phosphate pathway, and Entner-Doudoroff pathway. In: Neidhardt F.C. (Ed). Escherichia coli and Salmonella typhimurium (1987), American Society for Microbiology, Washington 142-150
-
(1987)
Escherichia coli and Salmonella typhimurium
, pp. 142-150
-
-
Fraenkel, D.1
-
23
-
-
0042244174
-
An example of the prisoner's dilemma in biochemistry
-
Frick T., and Schuster S. An example of the prisoner's dilemma in biochemistry. Naturwissenschaften 90 (2003) 327-331
-
(2003)
Naturwissenschaften
, vol.90
, pp. 327-331
-
-
Frick, T.1
Schuster, S.2
-
24
-
-
0036134944
-
Respiration-dependent utilization of sugars in yeasts: a determinant role for sugar transporters
-
Goffrini P., Ferrero I., and Donnini C. Respiration-dependent utilization of sugars in yeasts: a determinant role for sugar transporters. J. Bacteriol. 184 (2002) 427-432
-
(2002)
J. Bacteriol.
, vol.184
, pp. 427-432
-
-
Goffrini, P.1
Ferrero, I.2
Donnini, C.3
-
25
-
-
26244437466
-
Expanding metabolic networks: scopes of compounds, robustness, and evolution
-
Handorf T., Ebenhöh O., and Heinrich R. Expanding metabolic networks: scopes of compounds, robustness, and evolution. J. Mol. Evol. 61 4 (2005) 498-512
-
(2005)
J. Mol. Evol.
, vol.61
, Issue.4
, pp. 498-512
-
-
Handorf, T.1
Ebenhöh, O.2
Heinrich, R.3
-
26
-
-
0014413249
-
The tragedy of the commons
-
Hardin G. The tragedy of the commons. Science 162 (1968) 1243-1248
-
(1968)
Science
, vol.162
, pp. 1243-1248
-
-
Hardin, G.1
-
27
-
-
0021782084
-
Efficiency and design of simple metabolic systems
-
Heinrich R., and Holzhütter H.-G. Efficiency and design of simple metabolic systems. Biomed. Biochim. Acta 44 (1985) 959-969
-
(1985)
Biomed. Biochim. Acta
, vol.44
, pp. 959-969
-
-
Heinrich, R.1
Holzhütter, H.-G.2
-
29
-
-
0023497923
-
A theoretical approach to the evolution and structural design of enzymatic networks; linear enzymatic chains, branched pathways and glycolysis of erythrocytes
-
Heinrich R., Holzhütter H.G., and Schuster S. A theoretical approach to the evolution and structural design of enzymatic networks; linear enzymatic chains, branched pathways and glycolysis of erythrocytes. Bull. Math. Biol. 49 (1987) 539-595
-
(1987)
Bull. Math. Biol.
, vol.49
, pp. 539-595
-
-
Heinrich, R.1
Holzhütter, H.G.2
Schuster, S.3
-
30
-
-
0031030714
-
Theoretical approaches to the evolutionary optimization of glycolysis: thermodynamic and kinetic constraints
-
Heinrich R., Montero F., Klipp E., Waddell T.G., and Meléndez-Hevia E. Theoretical approaches to the evolutionary optimization of glycolysis: thermodynamic and kinetic constraints. Eur. J. Biochem. 243 (1997) 191-201
-
(1997)
Eur. J. Biochem.
, vol.243
, pp. 191-201
-
-
Heinrich, R.1
Montero, F.2
Klipp, E.3
Waddell, T.G.4
Meléndez-Hevia, E.5
-
31
-
-
34447308322
-
Genome-scale analysis of Saccharomyces cerevisiae metabolism and ethanol production in fed-batch culture
-
Hjersted J.L., Henson M.A., and Mahadevan R. Genome-scale analysis of Saccharomyces cerevisiae metabolism and ethanol production in fed-batch culture. Biotechnol. Bioeng. 97 (2007) 1190-1204
-
(2007)
Biotechnol. Bioeng.
, vol.97
, pp. 1190-1204
-
-
Hjersted, J.L.1
Henson, M.A.2
Mahadevan, R.3
-
33
-
-
3242795003
-
The principle of flux minimization and its application to estimate stationary fluxes in metabolic networks
-
Holzhütter H.G. The principle of flux minimization and its application to estimate stationary fluxes in metabolic networks. Eur. J. Biochem. 271 (2004) 2905-2922
-
(2004)
Eur. J. Biochem.
, vol.271
, pp. 2905-2922
-
-
Holzhütter, H.G.1
-
34
-
-
32044470064
-
The generalized flux-minimization method and its application to metabolic networks affected by enzyme deficiencies
-
Holzhütter H.G. The generalized flux-minimization method and its application to metabolic networks affected by enzyme deficiencies. Biosystems 83 (2006) 98-107
-
(2006)
Biosystems
, vol.83
, pp. 98-107
-
-
Holzhütter, H.G.1
-
35
-
-
0037079023
-
Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
-
Ibarra R.U., Edwards J.S., and Palsson B.O. Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth. Nature 420 (2002) 186-189
-
(2002)
Nature
, vol.420
, pp. 186-189
-
-
Ibarra, R.U.1
Edwards, J.S.2
Palsson, B.O.3
-
36
-
-
0017873553
-
Glucose-metabolism and dimorphism in Mucor
-
Inderlied C.B., and Sypherd P.S. Glucose-metabolism and dimorphism in Mucor. J. Bacteriol. 133 (1978) 1282-1286
-
(1978)
J. Bacteriol.
, vol.133
, pp. 1282-1286
-
-
Inderlied, C.B.1
Sypherd, P.S.2
-
38
-
-
0021277007
-
Evolution of catalytic proteins. On the origin of enzyme species by means of natural selection
-
Kacser H., and Beeby R. Evolution of catalytic proteins. On the origin of enzyme species by means of natural selection. J. Mol. Evol. 20 (1984) 38-51
-
(1984)
J. Mol. Evol.
, vol.20
, pp. 38-51
-
-
Kacser, H.1
Beeby, R.2
-
39
-
-
0030916547
-
Effects of alternative methyl group acceptors on the growth energetics of the O-demethylating anaerobe Holophaga foetida
-
Kappler O., Janssen P.H., Kreft J.U., and Schink B. Effects of alternative methyl group acceptors on the growth energetics of the O-demethylating anaerobe Holophaga foetida. Microbiology 143 (1997) 1105-1114
-
(1997)
Microbiology
, vol.143
, pp. 1105-1114
-
-
Kappler, O.1
Janssen, P.H.2
Kreft, J.U.3
Schink, B.4
-
40
-
-
0037197159
-
Calculability analysis in underdetermined metabolic networks illustrated by a model of the central metabolism in purple nonsulfur bacteria
-
Klamt S., Schuster S., and Gilles E.D. Calculability analysis in underdetermined metabolic networks illustrated by a model of the central metabolism in purple nonsulfur bacteria. Biotechnol. Bioeng. 77 (2002) 734-751
-
(2002)
Biotechnol. Bioeng.
, vol.77
, pp. 734-751
-
-
Klamt, S.1
Schuster, S.2
Gilles, E.D.3
-
41
-
-
84889389880
-
-
Wiley-VCH, Weinheim
-
Klipp E., Herwig R., Kowald A., Wierling C., and Lehrach H. Systems Biology in Practice (2005), Wiley-VCH, Weinheim
-
(2005)
Systems Biology in Practice
-
-
Klipp, E.1
Herwig, R.2
Kowald, A.3
Wierling, C.4
Lehrach, H.5
-
42
-
-
33745691051
-
Conflicts of interest in biofilms
-
Kreft J.U. Conflicts of interest in biofilms. Biofilms 1 (2004) 265-276
-
(2004)
Biofilms
, vol.1
, pp. 265-276
-
-
Kreft, J.U.1
-
43
-
-
0016832427
-
Factors affecting filamentation in Candida albicans: changes in respiratory activity of Candida albicans during filamentation
-
Land G.A., McDonald W.C., Stjernholm R.L., and Friedman L. Factors affecting filamentation in Candida albicans: changes in respiratory activity of Candida albicans during filamentation. Infect. Immun. 12 (1975) 119-127
-
(1975)
Infect. Immun.
, vol.12
, pp. 119-127
-
-
Land, G.A.1
McDonald, W.C.2
Stjernholm, R.L.3
Friedman, L.4
-
45
-
-
33745310267
-
Resource competition and social conflict in experimental populations of yeast
-
MacLean R.C., and Gudelj I. Resource competition and social conflict in experimental populations of yeast. Nature 441 (2006) 498-501
-
(2006)
Nature
, vol.441
, pp. 498-501
-
-
MacLean, R.C.1
Gudelj, I.2
-
46
-
-
17944392527
-
The fractal structure of glycogen: a clever solution to optimize cell metabolism
-
Meléndez R., Meléndez-Hevia E., and Canela E.I. The fractal structure of glycogen: a clever solution to optimize cell metabolism. Biophys. J. 77 (1999) 1327-1332
-
(1999)
Biophys. J.
, vol.77
, pp. 1327-1332
-
-
Meléndez, R.1
Meléndez-Hevia, E.2
Canela, E.I.3
-
47
-
-
0028223931
-
Optimization of metabolism: the evolution of metabolic pathways toward simplicity through the game of the pentose phosphate cycle
-
Meléndez-Hevia E., Waddell T.G., and Montero F. Optimization of metabolism: the evolution of metabolic pathways toward simplicity through the game of the pentose phosphate cycle. J. Theor. Biol. 166 (1994) 201-220
-
(1994)
J. Theor. Biol.
, vol.166
, pp. 201-220
-
-
Meléndez-Hevia, E.1
Waddell, T.G.2
Montero, F.3
-
48
-
-
0031058143
-
Theoretical approaches to the evolutionary optimization of glycolysis. Chemical analysis
-
Meléndez-Hevia E., Waddell T.G., Heinrich R., and Montero F. Theoretical approaches to the evolutionary optimization of glycolysis. Chemical analysis. Eur. J. Biochem. 244 (1997) 527-543
-
(1997)
Eur. J. Biochem.
, vol.244
, pp. 527-543
-
-
Meléndez-Hevia, E.1
Waddell, T.G.2
Heinrich, R.3
Montero, F.4
-
49
-
-
33747363488
-
Experimental tests for an evolutionary trade-off between growth rate and yield in E. coli
-
Novak M., Pfeiffer T., Lenski R.E., Sauer U., and Bonhoeffer S. Experimental tests for an evolutionary trade-off between growth rate and yield in E. coli. Am. Nat. 168 2 (2006) 242-251
-
(2006)
Am. Nat.
, vol.168
, Issue.2
, pp. 242-251
-
-
Novak, M.1
Pfeiffer, T.2
Lenski, R.E.3
Sauer, U.4
Bonhoeffer, S.5
-
51
-
-
0842288340
-
Evolutionary dynamics of biological games
-
Nowak M.A., and Sigmund K. Evolutionary dynamics of biological games. Science 303 (2004) 793-799
-
(2004)
Science
, vol.303
, pp. 793-799
-
-
Nowak, M.A.1
Sigmund, K.2
-
52
-
-
23944440242
-
Modeling Lactococcus lactis using a genome-scale flux model
-
Oliveira A.P., Nielsen J., and Förster J. Modeling Lactococcus lactis using a genome-scale flux model. BMC Microbiol. 5 (2005) 39
-
(2005)
BMC Microbiol.
, vol.5
, pp. 39
-
-
Oliveira, A.P.1
Nielsen, J.2
Förster, J.3
-
53
-
-
0037727678
-
Metabolic pathways in the post-genome era
-
Papin J.A., Price N.D., Wiback S.J., Fell D.A., and Palsson B.O. Metabolic pathways in the post-genome era. Trends Biochem. Sci. 28 (2003) 250-258
-
(2003)
Trends Biochem. Sci.
, vol.28
, pp. 250-258
-
-
Papin, J.A.1
Price, N.D.2
Wiback, S.J.3
Fell, D.A.4
Palsson, B.O.5
-
54
-
-
0021383728
-
Equations and calculations for fermentations of butyric acid bacteria
-
Papoutsakis E.T. Equations and calculations for fermentations of butyric acid bacteria. Biotechnol. Bioeng. 26 (1984) 174-187
-
(1984)
Biotechnol. Bioeng.
, vol.26
, pp. 174-187
-
-
Papoutsakis, E.T.1
-
55
-
-
0036333748
-
Evolutionary consequences of tradeoffs between yield and rate of ATP production
-
Pfeiffer T., and Bonhoeffer S. Evolutionary consequences of tradeoffs between yield and rate of ATP production. Z. Phys. Chem. 216 (2002) 51-63
-
(2002)
Z. Phys. Chem.
, vol.216
, pp. 51-63
-
-
Pfeiffer, T.1
Bonhoeffer, S.2
-
56
-
-
0037417977
-
An evolutionary scenario for the transition to undifferentiated multicellularity
-
Pfeiffer T., and Bonhoeffer S. An evolutionary scenario for the transition to undifferentiated multicellularity. Proc. Natl. Acad. Sci. USA 100 (2003) 1095-1098
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 1095-1098
-
-
Pfeiffer, T.1
Bonhoeffer, S.2
-
57
-
-
11844280852
-
Game-theoretical approaches to studying the evolution of biochemical systems
-
Pfeiffer T., and Schuster S. Game-theoretical approaches to studying the evolution of biochemical systems. Trends Biochem. Sci. 30 (2005) 20-25
-
(2005)
Trends Biochem. Sci.
, vol.30
, pp. 20-25
-
-
Pfeiffer, T.1
Schuster, S.2
-
58
-
-
0035917865
-
Cooperation and competition in the evolution of ATP-producing pathways
-
Pfeiffer T., Schuster S., and Bonhoeffer S. Cooperation and competition in the evolution of ATP-producing pathways. Science 292 (2001) 504-507
-
(2001)
Science
, vol.292
, pp. 504-507
-
-
Pfeiffer, T.1
Schuster, S.2
Bonhoeffer, S.3
-
59
-
-
0024615221
-
Enzymic analysis of the Crabtree effect in glucose-limited chemostat cultures of Saccharomyces cerevisiae
-
Postma E., Verduyn C., Scheffers W.A., and Van Dijken J.P. Enzymic analysis of the Crabtree effect in glucose-limited chemostat cultures of Saccharomyces cerevisiae. Appl. Environ. Microbiol. 55 (1989) 468-477
-
(1989)
Appl. Environ. Microbiol.
, vol.55
, pp. 468-477
-
-
Postma, E.1
Verduyn, C.2
Scheffers, W.A.3
Van Dijken, J.P.4
-
60
-
-
0034447725
-
Combining pathway analysis with flux balance analysis for the comprehensive study of metabolic systems
-
Schilling C.H., Edwards J.S., Letscher D., and Palsson B.O. Combining pathway analysis with flux balance analysis for the comprehensive study of metabolic systems. Biotechnol. Bioeng. 71 (2000) 286-306
-
(2000)
Biotechnol. Bioeng.
, vol.71
, pp. 286-306
-
-
Schilling, C.H.1
Edwards, J.S.2
Letscher, D.3
Palsson, B.O.4
-
61
-
-
33750316500
-
Metabolic pathway analysis in biotechnology
-
Kholodenko B.N., and Westerhoff H.V. (Eds), Horizon Scientific, Wymondham
-
Schuster S. Metabolic pathway analysis in biotechnology. In: Kholodenko B.N., and Westerhoff H.V. (Eds). Metabolic Engineering in the Post Genomic Era (2004), Horizon Scientific, Wymondham 181-208
-
(2004)
Metabolic Engineering in the Post Genomic Era
, pp. 181-208
-
-
Schuster, S.1
-
62
-
-
84889776836
-
Modeling and simulating metabolic networks
-
Lengauer T. (Ed), Wiley-VCH, Weinheim
-
Schuster S., and Fell D.A. Modeling and simulating metabolic networks. In: Lengauer T. (Ed). Bioinformatics: From Genomes to Therapies vol. 2 (2007), Wiley-VCH, Weinheim 755-805
-
(2007)
Bioinformatics: From Genomes to Therapies
, vol.2
, pp. 755-805
-
-
Schuster, S.1
Fell, D.A.2
-
63
-
-
0033080396
-
Detection of elementary flux modes in biochemical networks: a promising tool for pathway analysis and metabolic engineering
-
Schuster S., Dandekar T., and Fell D.A. Detection of elementary flux modes in biochemical networks: a promising tool for pathway analysis and metabolic engineering. Trends Biotechnol. 17 (1999) 53-60
-
(1999)
Trends Biotechnol.
, vol.17
, pp. 53-60
-
-
Schuster, S.1
Dandekar, T.2
Fell, D.A.3
-
64
-
-
0008610359
-
Recent developments in metabolic pathway analysis and their potential implications for biotechnology and medicine
-
Cornish-Bowden A., and Cárdenas M.L. (Eds), Kluwer, Dordrecht
-
Schuster S., Dandekar T., Mauch K., Reuss M., and Fell D. Recent developments in metabolic pathway analysis and their potential implications for biotechnology and medicine. In: Cornish-Bowden A., and Cárdenas M.L. (Eds). Technological and Medical Implications of Metabolic Control Analysis (2000), Kluwer, Dordrecht 57-66
-
(2000)
Technological and Medical Implications of Metabolic Control Analysis
, pp. 57-66
-
-
Schuster, S.1
Dandekar, T.2
Mauch, K.3
Reuss, M.4
Fell, D.5
-
65
-
-
0035725112
-
Use of network analysis of metabolic systems in bioengineering
-
Schuster S., Klamt S., Weckwerth W., Moldenhauer F., and Pfeiffer T. Use of network analysis of metabolic systems in bioengineering. Bioprocess Biosyst. Eng. 24 (2002) 363-372
-
(2002)
Bioprocess Biosyst. Eng.
, vol.24
, pp. 363-372
-
-
Schuster, S.1
Klamt, S.2
Weckwerth, W.3
Moldenhauer, F.4
Pfeiffer, T.5
-
66
-
-
0033532830
-
Optimal stoichiometric designs of ATP-producing systems as determined by an evolutionary algorithm
-
Stephani A., Nuño J.C., and Heinrich R. Optimal stoichiometric designs of ATP-producing systems as determined by an evolutionary algorithm. J. Theor. Biol. 199 (1999) 45-61
-
(1999)
J. Theor. Biol.
, vol.199
, pp. 45-61
-
-
Stephani, A.1
Nuño, J.C.2
Heinrich, R.3
-
67
-
-
33846015888
-
Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model
-
Teusink B., Wiersma A., Molenaar D., Francke C., de Vos W.M., Siezen R.J., and Smid E.J. Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model. J. Biol. Chem. 281 (2006) 40041-40048
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 40041-40048
-
-
Teusink, B.1
Wiersma, A.2
Molenaar, D.3
Francke, C.4
de Vos, W.M.5
Siezen, R.J.6
Smid, E.J.7
-
68
-
-
33749448704
-
Design, construction and performance of the most efficient biomass producing E. coli bacterium
-
Trinh C.T., Carlson R., Wlaschin A., and Srienc F. Design, construction and performance of the most efficient biomass producing E. coli bacterium. Metab. Eng. 8 (2006) 628-638
-
(2006)
Metab. Eng.
, vol.8
, pp. 628-638
-
-
Trinh, C.T.1
Carlson, R.2
Wlaschin, A.3
Srienc, F.4
-
69
-
-
0028764687
-
Linear constraint relations in biochemical reaction systems: I. Classification of the calculability and the balanceability of conversion rates
-
Van der Heijden R.T.J.M., Heijnen J.J., Hellinga C., Romein B., and Luyben K.C.A.M. Linear constraint relations in biochemical reaction systems: I. Classification of the calculability and the balanceability of conversion rates. Biotechnol. Bioeng. 43 (1994) 3-10
-
(1994)
Biotechnol. Bioeng.
, vol.43
, pp. 3-10
-
-
Van der Heijden, R.T.J.M.1
Heijnen, J.J.2
Hellinga, C.3
Romein, B.4
Luyben, K.C.A.M.5
-
70
-
-
0027716622
-
Metabolic capabilities of Escherichia coli. I. Synthesis of biosynthetic precursors and cofactors
-
Varma A., and Palsson B.O. Metabolic capabilities of Escherichia coli. I. Synthesis of biosynthetic precursors and cofactors. J. Theor. Biol. 165 (1993) 477-502
-
(1993)
J. Theor. Biol.
, vol.165
, pp. 477-502
-
-
Varma, A.1
Palsson, B.O.2
-
71
-
-
0027723421
-
Metabolic capabilities of Escherichia coli. II. Optimal growth patterns
-
Varma A., and Palsson B.O. Metabolic capabilities of Escherichia coli. II. Optimal growth patterns. J. Theor. Biol. 165 (1993) 503-522
-
(1993)
J. Theor. Biol.
, vol.165
, pp. 503-522
-
-
Varma, A.1
Palsson, B.O.2
-
72
-
-
0028146781
-
Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110
-
Varma A., and Palsson B.O. Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110. Appl. Environ. Microbiol. 60 (1994) 3724-3731
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 3724-3731
-
-
Varma, A.1
Palsson, B.O.2
-
73
-
-
0034283755
-
Cyanide-resistant respiration is frequent, but confined to yeasts incapable of aerobic fermentation
-
Veiga A., Arrabaça J.D., and Loureiro-Dias M.C. Cyanide-resistant respiration is frequent, but confined to yeasts incapable of aerobic fermentation. FEMS Microbiol. Lett. 190 (2000) 93-97
-
(2000)
FEMS Microbiol. Lett.
, vol.190
, pp. 93-97
-
-
Veiga, A.1
Arrabaça, J.D.2
Loureiro-Dias, M.C.3
-
74
-
-
0034972742
-
Evolutionary cheating in Escherichia coli stationary phase cultures
-
Vulic M., and Kolter R. Evolutionary cheating in Escherichia coli stationary phase cultures. Genetics 158 (2001) 519-526
-
(2001)
Genetics
, vol.158
, pp. 519-526
-
-
Vulic, M.1
Kolter, R.2
-
75
-
-
0031441724
-
Optimization of glycolysis: a new look at the efficiency of energy coupling
-
Waddell T.G., Repovic E., Meléndez-Hevia E., Heinrich R., and Montero F. Optimization of glycolysis: a new look at the efficiency of energy coupling. Biochem. Educ. 25 (1997) 204-205
-
(1997)
Biochem. Educ.
, vol.25
, pp. 204-205
-
-
Waddell, T.G.1
Repovic, E.2
Meléndez-Hevia, E.3
Heinrich, R.4
Montero, F.5
-
76
-
-
0033002653
-
Optimization of glycolysis: new discussions
-
Waddell T.G., Repovic P., Meléndez-Hevia E., Heinrich R., and Montero F. Optimization of glycolysis: new discussions. Biochem. Educ. 27 (1999) 12-13
-
(1999)
Biochem. Educ.
, vol.27
, pp. 12-13
-
-
Waddell, T.G.1
Repovic, P.2
Meléndez-Hevia, E.3
Heinrich, R.4
Montero, F.5
-
77
-
-
0022654123
-
A discrete model of bacterial metabolism
-
Watson M.R. A discrete model of bacterial metabolism. CABIOS 2 (1986) 23-27
-
(1986)
CABIOS
, vol.2
, pp. 23-27
-
-
Watson, M.R.1
|