-
1
-
-
79960148707
-
Timing is everything: The when and how of environmentally induced changes in the epigenome of animals
-
Faulk, C. and Dolinoy, D.C. Timing is everything: the when and how of environmentally induced changes in the epigenome of animals. Epigenetics, 6, 791-797.
-
Epigenetics
, vol.6
, pp. 791-797
-
-
Faulk, C.1
Dolinoy, D.C.2
-
2
-
-
69249235740
-
Calorie restriction and the exercise of chromatin
-
Vaquero, A. and Reinberg, D. (2009) Calorie restriction and the exercise of chromatin. Genes Dev., 23, 1849-1869.
-
(2009)
Genes Dev.
, vol.23
, pp. 1849-1869
-
-
Vaquero, A.1
Reinberg, D.2
-
4
-
-
0025776523
-
Targets for cell cycle arrest by the immunosuppressant rapamycin in yeast
-
Heitman, J., Movva, N.R. and Hall, M.N. (1991) Targets for cell cycle arrest by the immunosuppressant rapamycin in yeast. Science, 253, 905-909. (Pubitemid 21917235)
-
(1991)
Science
, vol.253
, Issue.5022
, pp. 905-909
-
-
Hietman, J.1
Movva, N.R.2
Hall, M.N.3
-
5
-
-
0028360374
-
A mammalian protein targeted by G1-arresting rapamycin-receptor complex
-
Brown, E.J., Albers, M.W., Shin, T.B., Ichikawa, K., Keith, C.T., Lane, W.S. and Schreiber, S.L. (1994) A mammalian protein targeted by G1-arresting rapamycin-receptor complex. Nature, 369, 756-758.
-
(1994)
Nature
, vol.369
, pp. 756-758
-
-
Brown, E.J.1
Albers, M.W.2
Shin, T.B.3
Ichikawa, K.4
Keith, C.T.5
Lane, W.S.6
Schreiber, S.L.7
-
6
-
-
0028239893
-
RAFT1: A mammalian protein that binds to FKBP12 in a rapamycin-dependent fashion and is homologous to yeast TORs
-
DOI 10.1016/0092-8674(94)90570-3
-
Sabatini, D.M., Erdjument-Bromage, H., Lui, M., Tempst, P. and Snyder, S.H. (1994) RAFT1: a mammalian protein that binds to FKBP12 in a rapamycin-dependent fashion and is homologous to yeast TORs. Cell, 78, 35-43. (Pubitemid 24228298)
-
(1994)
Cell
, vol.78
, Issue.1
, pp. 35-43
-
-
Sabatini, D.M.1
Erdjument-Bromage, H.2
Lui, M.3
Tempst, P.4
Snyder, S.H.5
-
7
-
-
32044465506
-
TOR signaling in growth and metabolism
-
DOI 10.1016/j.cell.2006.01.016, PII S0092867406001085
-
Wullschleger, S., Loewith, R. and Hall, M.N. (2006) TOR signaling in growth and metabolism. Cell, 124, 471-484. (Pubitemid 43199434)
-
(2006)
Cell
, vol.124
, Issue.3
, pp. 471-484
-
-
Wullschleger, S.1
Loewith, R.2
Hall, M.N.3
-
8
-
-
69749113579
-
The Vam6 GEF controls TORC1 by activating the EGO complex
-
Binda, M., Peli-Gulli, M.P., Bonfils, G., Panchaud, N., Urban, J., Sturgill, T.W., Loewith, R. and De Virgilio, C. (2009) The Vam6 GEF controls TORC1 by activating the EGO complex. Mol. Cell, 35, 563-573.
-
(2009)
Mol. Cell
, vol.35
, pp. 563-573
-
-
Binda, M.1
Peli-Gulli, M.P.2
Bonfils, G.3
Panchaud, N.4
Urban, J.5
Sturgill, T.W.6
Loewith, R.7
De Virgilio, C.8
-
9
-
-
34249813098
-
Sch9 Is a Major Target of TORC1 in Saccharomyces cerevisiae
-
DOI 10.1016/j.molcel.2007.04.020, PII S1097276507002560
-
Urban, J., Soulard, A., Huber, A., Lippman, S., Mukhopadhyay, D., Deloche, O., Wanke, V., Anrather, D., Ammerer, G., Riezman, H. et al. (2007) Sch9 is a major target of TORC1 in Saccharomyces cerevisiae. Mol. Cell, 26, 663-674. (Pubitemid 46856238)
-
(2007)
Molecular Cell
, vol.26
, Issue.5
, pp. 663-674
-
-
Urban, J.1
Soulard, A.2
Huber, A.3
Lippman, S.4
Mukhopadhyay, D.5
Deloche, O.6
Wanke, V.7
Anrather, D.8
Ammerer, G.9
Riezman, H.10
Broach, J.R.11
De Virgilio, C.12
Hall, M.N.13
Loewith, R.14
-
10
-
-
69249240179
-
Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis
-
Huber, A., Bodenmiller, B., Uotila, A., Stahl, M., Wanka, S., Gerrits, B., Aebersold, R. and Loewith, R. (2009) Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis. Genes Dev., 23, 1929-1943.
-
(2009)
Genes Dev.
, vol.23
, pp. 1929-1943
-
-
Huber, A.1
Bodenmiller, B.2
Uotila, A.3
Stahl, M.4
Wanka, S.5
Gerrits, B.6
Aebersold, R.7
Loewith, R.8
-
11
-
-
33748298941
-
Nutrient regulates Tor1 nuclear localization and association with rDNA promoter
-
DOI 10.1038/nature05020, PII NATURE05020
-
Li, H., Tsang, C.K., Watkins, M., Bertram, P.G. and Zheng, X.F. (2006) Nutrient regulates Tor1 nuclear localization and association with rDNA promoter. Nature, 442, 1058-1061. (Pubitemid 44330265)
-
(2006)
Nature
, vol.442
, Issue.7106
, pp. 1058-1061
-
-
Li, H.1
Tsang, C.K.2
Watkins, M.3
Bertram, P.G.4
Zheng, X.F.S.5
-
12
-
-
36749081539
-
MTOR controls mitochondrial oxidative function through a YY1-PGC-1α transcriptional complex
-
DOI 10.1038/nature06322, PII NATURE06322
-
Cunningham, J.T., Rodgers, J.T., Arlow, D.H., Vazquez, F., Mootha, V.K. and Puigserver, P. (2007) mTOR controls mitochondrial oxidative function through a YY1-PGC-1alpha transcriptional complex. Nature, 450, 736-740. (Pubitemid 350207689)
-
(2007)
Nature
, vol.450
, Issue.7170
, pp. 736-740
-
-
Cunningham, J.T.1
Rodgers, J.T.2
Arlow, D.H.3
Vazquez, F.4
Mootha, V.K.5
Puigserver, P.6
-
13
-
-
77953512889
-
MTOR binds to the promoters of RNA polymerase I-and III-transcribed genes
-
Tsang, C.K., Liu, H. and Zheng, X.F. (2010) mTOR binds to the promoters of RNA polymerase I-and III-transcribed genes. Cell Cycle, 9, 953-957.
-
(2010)
Cell Cycle
, vol.9
, pp. 953-957
-
-
Tsang, C.K.1
Liu, H.2
Zheng, X.F.3
-
14
-
-
77955287244
-
MTOR associates with TFIIIC, is found at tRNA and 5S rRNA genes, and targets their repressor Maf1
-
Kantidakis, T., Ramsbottom, B.A., Birch, J.L., Dowding, S.N. and White, R.J. (2010) mTOR associates with TFIIIC, is found at tRNA and 5S rRNA genes, and targets their repressor Maf1. Proc. Natl Acad. Sci. USA, 107, 11823-11828.
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 11823-11828
-
-
Kantidakis, T.1
Ramsbottom, B.A.2
Birch, J.L.3
Dowding, S.N.4
White, R.J.5
-
15
-
-
18344373276
-
The genome-wide localization of Rsc9, a component of the RSC chromatin-remodeling complex, changes in response to stress
-
DOI 10.1016/S1097-2765(02)00475-6
-
Damelin, M., Simon, I., Moy, T.I., Wilson, B., Komili, S., Tempst, P., Roth, F.P., Young, R.A., Cairns, B.R. and Silver, P.A. (2002) The genome-wide localization of Rsc9, a component of the RSC chromatin-remodeling complex, changes in response to stress. Mol. Cell, 9, 563-573. (Pubitemid 34273787)
-
(2002)
Molecular Cell
, vol.9
, Issue.3
, pp. 563-573
-
-
Damelin, M.1
Simon, I.2
Moy, T.I.3
Wilson, B.4
Komili, S.5
Tempst, P.6
Roth, F.P.7
Young, R.A.8
Cairns, B.R.9
Silver, P.A.10
-
16
-
-
0345305803
-
Chromatin-mediated regulation of nucleolar structure and RNA Pol I localization by TOR
-
DOI 10.1093/emboj/cdg578
-
Tsang, C.K., Bertram, P.G., Ai, W., Drenan, R. and Zheng, X.F. (2003) Chromatin-mediated regulation of nucleolar structure and RNA Pol I localization by TOR. EMBO J., 22, 6045-6056. (Pubitemid 37463248)
-
(2003)
EMBO Journal
, vol.22
, Issue.22
, pp. 6045-6056
-
-
Tsang, C.K.1
Bertram, P.G.2
Ai, W.3
Drenan, R.4
Zheng, X.F.S.5
-
17
-
-
6444241134
-
Rpd3p relocation mediates a transcriptional response to rapamycin in yeast
-
DOI 10.1016/j.chembiol.2004.03.001, PII S1074552104000638
-
Humphrey, E.L., Shamji, A.F., Bernstein, B.E. and Schreiber, S.L. (2004) Rpd3p relocation mediates a transcriptional response to rapamycin in yeast. Chem. Biol., 11, 295-299. (Pubitemid 39403868)
-
(2004)
Chemistry and Biology
, vol.11
, Issue.3
, pp. 295-299
-
-
Humphrey, E.L.1
Shamji, A.F.2
Bernstein, B.E.3
Schreiber, S.L.4
-
18
-
-
0037223438
-
The Tor pathway regulates gene expression by linking nutrient sensing to histone acetylation
-
DOI 10.1128/MCB.23.2.629-635.2003
-
Rohde, J.R. and Cardenas, M.E. (2003) The tor pathway regulates gene expression by linking nutrient sensing to histone acetylation. Mol. Cell Biol., 23, 629-635. (Pubitemid 36050555)
-
(2003)
Molecular and Cellular Biology
, vol.23
, Issue.2
, pp. 629-635
-
-
Rohde, J.R.1
Cardenas, M.E.2
-
20
-
-
48249148195
-
Acetylation in the globular core of histone H3 on lysine-56 promotes chromatin disassembly during transcriptional activation
-
Williams, S.K., Truong, D. and Tyler, J.K. (2008) Acetylation in the globular core of histone H3 on lysine-56 promotes chromatin disassembly during transcriptional activation. Proc. Natl Acad. Sci. USA, 105, 9000-9005.
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 9000-9005
-
-
Williams, S.K.1
Truong, D.2
Tyler, J.K.3
-
21
-
-
34047262671
-
Transcriptional regulation by chromatin disassembly and reassembly
-
DOI 10.1016/j.gde.2007.02.001, PII S0959437X07000275, Chromosomes and Expression Mechanisms
-
Williams, S.K. and Tyler, J.K. (2007) Transcriptional regulation by chromatin disassembly and reassembly. Curr. Opin. Genet. Dev., 17, 88-93. (Pubitemid 46551714)
-
(2007)
Current Opinion in Genetics and Development
, vol.17
, Issue.2
, pp. 88-93
-
-
Williams, S.K.1
Tyler, J.K.2
-
22
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
DOI 10.1038/38444
-
Luger, K., Mader, A.W., Richmond, R.K., Sargent, D.F. and Richmond, T.J. (1997) Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature, 389, 251-260. (Pubitemid 27406632)
-
(1997)
Nature
, vol.389
, Issue.6648
, pp. 251-260
-
-
Luger, K.1
Mader, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
23
-
-
70349765673
-
A method for genetically installing site-specific acetylation in recombinant histones defines the effects of H3K56 acetylation
-
Neumann, H., Hancock, S.M., Buning, R., Routh, A., Chapman, L., Somers, J., Owen-Hughes, T., van Noort, J., Rhodes, D. and Chin, J.W. (2009) A method for genetically installing site-specific acetylation in recombinant histones defines the effects of H3K56 acetylation. Mol. Cell, 36, 153-163.
-
(2009)
Mol. Cell
, vol.36
, pp. 153-163
-
-
Neumann, H.1
Hancock, S.M.2
Buning, R.3
Routh, A.4
Chapman, L.5
Somers, J.6
Owen-Hughes, T.7
Van Noort, J.8
Rhodes, D.9
Chin, J.W.10
-
24
-
-
33646472914
-
Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis
-
Recht, J., Tsubota, T., Tanny, J.C., Diaz, R.L., Berger, J.M., Zhang, X., Garcia, B.A., Shabanowitz, J., Burlingame, A.L., Hunt, D.F. et al. (2006) Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis. Proc. Natl Acad. Sci. USA, 103, 6988-6993.
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 6988-6993
-
-
Recht, J.1
Tsubota, T.2
Tanny, J.C.3
Diaz, R.L.4
Berger, J.M.5
Zhang, X.6
Garcia, B.A.7
Shabanowitz, J.8
Burlingame, A.L.9
Hunt, D.F.10
-
25
-
-
33846023720
-
Rtt109 is required for proper H3K56 acetylation: A chromatin mark associated with the elongating RNA polymerase II
-
DOI 10.1074/jbc.C600265200
-
Schneider, J., Bajwa, P., Johnson, F.C., Bhaumik, S.R. and Shilatifard, A. (2006) Rtt109 is required for proper H3K56 acetylation: a chromatin mark associated with the elongating RNA polymerase II. J. Biol. Chem., 281, 37270-37274. (Pubitemid 46042030)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.49
, pp. 37270-37274
-
-
Schneider, J.1
Bajwa, P.2
Johnson, F.C.3
Bhaumik, S.R.4
Shilatifard, A.5
-
26
-
-
33846818840
-
Yeast Rtt109 promotes genome stability by acetylating histone H3 on lysine 56
-
DOI 10.1126/science.1135862
-
Driscoll, R., Hudson, A. and Jackson, S.P. (2007) Yeast Rtt109 promotes genome stability by acetylating histone H3 on lysine 56. Science, 315, 649-652. (Pubitemid 46214709)
-
(2007)
Science
, vol.315
, Issue.5812
, pp. 649-652
-
-
Driscoll, R.1
Hudson, A.2
Jackson, S.P.3
-
27
-
-
33846796258
-
Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication
-
DOI 10.1126/science.1133234
-
Han, J., Zhou, H., Horazdovsky, B., Zhang, K., Xu, R.M. and Zhang, Z. (2007) Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication. Science, 315, 653-655. (Pubitemid 46214710)
-
(2007)
Science
, vol.315
, Issue.5812
, pp. 653-655
-
-
Han, J.1
Zhou, H.2
Horazdovsky, B.3
Zhang, K.4
Xu, R.-M.5
Zhang, Z.6
-
28
-
-
74549138158
-
Chaperoning histones during DNA replication and repair
-
Ransom, M., Dennehey, B.K. and Tyler, J.K. (2010) Chaperoning histones during DNA replication and repair. Cell, 140, 183-195.
-
(2010)
Cell
, vol.140
, pp. 183-195
-
-
Ransom, M.1
Dennehey, B.K.2
Tyler, J.K.3
-
29
-
-
22444448143
-
A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response
-
DOI 10.1038/nature03714
-
Masumoto, H., Hawke, D., Kobayashi, R. and Verreault, A. (2005) A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response. Nature, 436, 294-298. (Pubitemid 41021284)
-
(2005)
Nature
, vol.436
, Issue.7048
, pp. 294-298
-
-
Masumoto, H.1
Hawke, D.2
Kobayashi, R.3
Verreault, A.4
-
30
-
-
33751241119
-
Histone H3 lysine 56 acetylation: A new twist in the chromosome cycle
-
Ozdemir, A., Masumoto, H., Fitzjohn, P., Verreault, A. and Logie, C. (2006) Histone H3 lysine 56 acetylation: a new twist in the chromosome cycle. Cell Cycle, 5, 2602-2608. (Pubitemid 44785804)
-
(2006)
Cell Cycle
, vol.5
, Issue.22
, pp. 2602-2608
-
-
Ozdemir, A.1
Masumoto, H.2
Fitzjohn, P.3
Verreault, A.4
Logie, C.5
-
31
-
-
22544441929
-
Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae
-
DOI 10.1074/jbc.C500181200
-
Ozdemir, A., Spicuglia, S., Lasonder, E., Vermeulen, M., Campsteijn, C., Stunnenberg, H.G. and Logie, C. (2005) Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae. J. Biol. Chem., 280, 25949-25952. (Pubitemid 41022184)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.28
, pp. 25949-25952
-
-
Ozdemir, A.1
Spicuglia, S.2
Lasonder, E.3
Vermeulen, M.4
Campsteijn, C.5
Stunnenberg, H.G.6
Logie, C.7
-
32
-
-
51549087123
-
Probing nucleosome function: A highly versatile library of synthetic histone H3 and H4 mutants
-
Dai, J., Hyland, E.M., Yuan, D.S., Huang, H., Bader, J.S. and Boeke, J.D. (2008) Probing nucleosome function: a highly versatile library of synthetic histone H3 and H4 mutants. Cell, 134, 1066-1078.
-
(2008)
Cell
, vol.134
, pp. 1066-1078
-
-
Dai, J.1
Hyland, E.M.2
Yuan, D.S.3
Huang, H.4
Bader, J.S.5
Boeke, J.D.6
-
33
-
-
57049152851
-
Catalysis and substrate selection by histone/protein lysine acetyltransferases
-
Berndsen, C.E. and Denu, J.M. (2008) Catalysis and substrate selection by histone/protein lysine acetyltransferases. Curr. Opin. Struct. Biol., 18, 682-689.
-
(2008)
Curr. Opin. Struct. Biol.
, vol.18
, pp. 682-689
-
-
Berndsen, C.E.1
Denu, J.M.2
-
34
-
-
4444271170
-
A versatile toolbox for PCR-based tagging of yeast genes: New fluorescent proteins, more markers and promoter substitution cassettes
-
DOI 10.1002/yea.1142
-
Janke, C., Magiera, M.M., Rathfelder, N., Taxis, C., Reber, S., Maekawa, H., Moreno-Borchart, A., Doenges, G., Schwob, E., Schiebel, E. et al. (2004) A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes. Yeast, 21, 947-962. (Pubitemid 39206863)
-
(2004)
Yeast
, vol.21
, Issue.11
, pp. 947-962
-
-
Janke, C.1
Magiera, M.M.2
Rathfelder, N.3
Taxis, C.4
Reber, S.5
Maekawa, H.6
Moreno-Borchart, A.7
Doenges, G.8
Schwob, E.9
Schiebel, E.10
Knop, M.11
-
35
-
-
34347254646
-
CCR4/NOT complex associates with the proteasome and regulates histone methylation
-
DOI 10.1073/pnas.0607996104
-
Laribee, R.N., Shibata, Y., Mersman, D.P., Collins, S.R., Kemmeren, P., Roguev, A., Weissman, J.S., Briggs, S.D., Krogan, N.J. and Strahl, B.D. (2007) CCR4/NOT complex associates with the proteasome and regulates histone methylation. Proc. Natl Acad. Sci. USA, 104, 5836-5841. (Pubitemid 47175620)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.14
, pp. 5836-5841
-
-
Laribee, R.N.1
Shibata, Y.2
Mersman, D.P.3
Collins, S.R.4
Kemmeren, P.5
Roguev, A.6
Weissman, J.S.7
Briggs, S.D.8
Krogan, N.J.9
Strahl, B.D.10
-
36
-
-
53749089421
-
THO/Sub2p functions to coordinate 3'-end processing with gene-nuclear pore association
-
Rougemaille, M., Dieppois, G., Kisseleva-Romanova, E., Gudipati, R.K., Lemoine, S., Blugeon, C., Boulay, J., Jensen, T.H., Stutz, F., Devaux, F. et al. (2008) THO/Sub2p functions to coordinate 3'-end processing with gene-nuclear pore association. Cell, 135, 308-321.
-
(2008)
Cell
, vol.135
, pp. 308-321
-
-
Rougemaille, M.1
Dieppois, G.2
Kisseleva-Romanova, E.3
Gudipati, R.K.4
Lemoine, S.5
Blugeon, C.6
Boulay, J.7
Jensen, T.H.8
Stutz, F.9
Devaux, F.10
-
37
-
-
85078505418
-
Improved flow cytometric analysis of the budding yeast cell cycle
-
Haase, S.B. and Reed, S.I. (2002) Improved flow cytometric analysis of the budding yeast cell cycle. Cell Cycle, 1, 132-136.
-
(2002)
Cell Cycle
, vol.1
, pp. 132-136
-
-
Haase, S.B.1
Reed, S.I.2
-
38
-
-
77956275748
-
Histone H3 serine 57 and lysine 56 interplay in transcription elongation and recovery from S-phase stress
-
Aslam, A. and Logie, C. (2010) Histone H3 serine 57 and lysine 56 interplay in transcription elongation and recovery from S-phase stress. PLoS One, 5, e10851.
-
(2010)
PLoS One
, vol.5
-
-
Aslam, A.1
Logie, C.2
-
39
-
-
34147217542
-
Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map
-
DOI 10.1038/nature05649, PII NATURE05649
-
Collins, S.R., Miller, K.M., Maas, N.L., Roguev, A., Fillingham, J., Chu, C.S., Schuldiner, M., Gebbia, M., Recht, J., Shales, M. et al. (2007) Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Nature, 446, 806-810. (Pubitemid 46582025)
-
(2007)
Nature
, vol.446
, Issue.7137
, pp. 806-810
-
-
Collins, S.R.1
Miller, K.M.2
Maas, N.L.3
Roguev, A.4
Fillingham, J.5
Chu, C.S.6
Schuldiner, M.7
Gebbia, M.8
Recht, J.9
Shales, M.10
Ding, H.11
Xu, H.12
Han, J.13
Ingvarsdottir, K.14
Cheng, B.15
Andrews, B.16
Boone, C.17
Berger, S.L.18
Hieter, P.19
Zhang, Z.20
Brown, G.W.21
Ingles, C.J.22
Emili, A.23
Allis, C.D.24
Toczyski, D.P.25
Weissman, J.S.26
Greenblatt, J.F.27
Krogan, N.J.28
more..
-
40
-
-
61349119934
-
Functional organization of the S. cerevisiae phosphorylation network
-
Fiedler, D., Braberg, H., Mehta, M., Chechik, G., Cagney, G., Mukherjee, P., Silva, A.C., Shales, M., Collins, S.R., van Wageningen, S. et al. (2009) Functional organization of the S. cerevisiae phosphorylation network. Cell, 136, 952-963.
-
(2009)
Cell
, vol.136
, pp. 952-963
-
-
Fiedler, D.1
Braberg, H.2
Mehta, M.3
Chechik, G.4
Cagney, G.5
Mukherjee, P.6
Silva, A.C.7
Shales, M.8
Collins, S.R.9
Van Wageningen, S.10
-
41
-
-
0031882240
-
TOR2 is part of two related signaling pathways coordinating cell growth in Saccharomyces cerevisiae
-
Helliwell, S.B., Howald, I., Barbet, N. and Hall, M.N. (1998) TOR2 is part of two related signaling pathways coordinating cell growth in Saccharomyces cerevisiae. Genetics, 148, 99-112. (Pubitemid 28063479)
-
(1998)
Genetics
, vol.148
, Issue.1
, pp. 99-112
-
-
Helliwell, S.B.1
Howald, I.2
Barbet, N.3
Hall, M.N.4
-
42
-
-
0030021524
-
TOR controls translation initiation and early G1 progression in yeast
-
Barbet, N.C., Schneider, U., Helliwell, S.B., Stansfield, I., Tuite, M.F. and Hall, M.N. (1996) TOR controls translation initiation and early G1 progression in yeast. Mol. Biol. Cell., 7, 25-42. (Pubitemid 26033647)
-
(1996)
Molecular Biology of the Cell
, vol.7
, Issue.1
, pp. 25-42
-
-
Barbet, N.C.1
Schneider, U.2
Helliwell, S.B.3
Stansfield, I.4
Tuite, M.F.5
Hall, M.N.6
-
43
-
-
79959585036
-
SWI/SNF and Asf1 independently promote derepression of the DNA damage response genes under conditions of replication stress
-
Minard, L.V., Lin, L.J. and Schultz, M.C. (2011) SWI/SNF and Asf1 independently promote derepression of the DNA damage response genes under conditions of replication stress. PLoS One, 6, e21633.
-
(2011)
PLoS One
, vol.6
-
-
Minard, L.V.1
Lin, L.J.2
Schultz, M.C.3
-
44
-
-
33846024055
-
Caffeine targets TOR complex I and provides evidence for a regulatory link between the FRB and kinase domains of Tor1p
-
DOI 10.1074/jbc.M603107200
-
Reinke, A., Chen, J.C., Aronova, S. and Powers, T. (2006) Caffeine targets TOR complex I and provides evidence for a regulatory link between the FRB and kinase domains of Tor1p. J. Biol. Chem., 281, 31616-31626. (Pubitemid 46043262)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.42
, pp. 31616-31626
-
-
Reinke, A.1
Chen, J.C.-Y.2
Aronova, S.3
Powers, T.4
-
45
-
-
33745520486
-
The Sirtuins Hst3 and Hst4p Preserve Genome Integrity by Controlling Histone H3 Lysine 56 Deacetylation
-
DOI 10.1016/j.cub.2006.06.023, PII S0960982206017490
-
Celic, I., Masumoto, H., Griffith, W.P., Meluh, P., Cotter, R.J., Boeke, J.D. and Verreault, A. (2006) The sirtuins hst3 and Hst4p preserve genome integrity by controlling histone h3 lysine 56 deacetylation. Curr. Biol., 16, 1280-1289. (Pubitemid 43977885)
-
(2006)
Current Biology
, vol.16
, Issue.13
, pp. 1280-1289
-
-
Celic, I.1
Masumoto, H.2
Griffith, W.P.3
Meluh, P.4
Cotter, R.J.5
Boeke, J.D.6
Verreault, A.7
-
46
-
-
0038506040
-
Life on a planet of its own: Regulation of RNA polymerase I transcription in the nucleolus
-
DOI 10.1101/gad.1098503R
-
Grummt, I. (2003) Life on a planet of its own: regulation of RNA polymerase I transcription in the nucleolus. Genes Dev., 17, 1691-1702. (Pubitemid 36870332)
-
(2003)
Genes and Development
, vol.17
, Issue.14
, pp. 1691-1702
-
-
Grummt, I.1
-
47
-
-
0033229970
-
The economics of ribosome biosynthesis in yeast
-
DOI 10.1016/S0968-0004(99)01460-7, PII S0968000499014607
-
Warner, J.R. (1999) The economics of ribosome biosynthesis in yeast. Trends Biochem. Sci., 24, 437-440. (Pubitemid 29528205)
-
(1999)
Trends in Biochemical Sciences
, vol.24
, Issue.11
, pp. 437-440
-
-
Warner, J.R.1
-
48
-
-
62249110156
-
Cdc14 inhibits transcription by RNA polymerase i during anaphase
-
Clemente-Blanco, A., Mayan-Santos, M., Schneider, D.A., Machin, F., Jarmuz, A., Tschochner, H. and Aragon, L. (2009) Cdc14 inhibits transcription by RNA polymerase I during anaphase. Nature, 458, 219-222.
-
(2009)
Nature
, vol.458
, pp. 219-222
-
-
Clemente-Blanco, A.1
Mayan-Santos, M.2
Schneider, D.A.3
MacHin, F.4
Jarmuz, A.5
Tschochner, H.6
Aragon, L.7
-
49
-
-
0033367325
-
Ribosome synthesis in Saccharomyces cerevisiae
-
DOI 10.1146/annurev.genet.33.1.261
-
Venema, J. and Tollervey, D. (1999) Ribosome synthesis in Saccharomyces cerevisiae. Annu. Rev. Genet., 33, 261-311. (Pubitemid 30083125)
-
(1999)
Annual Review of Genetics
, vol.33
, pp. 261-311
-
-
Venema, J.1
Tollervey, D.2
-
50
-
-
33646242795
-
An HMG protein, Hmo1, associates with promoters of many ribosomal protein genes and throughout the rRNA gene locus in Saccharomyces cerevisiae
-
Hall, D.B., Wade, J.T. and Struhl, K. (2006) An HMG protein, Hmo1, associates with promoters of many ribosomal protein genes and throughout the rRNA gene locus in Saccharomyces cerevisiae. Mol. Cell Biol, 26, 3672-3679.
-
(2006)
Mol. Cell Biol
, vol.26
, pp. 3672-3679
-
-
Hall, D.B.1
Wade, J.T.2
Struhl, K.3
-
51
-
-
0037107455
-
Hmo1, an HMG-box protein, belongs to the yeast ribosomal DNA transcription system
-
DOI 10.1093/emboj/cdf539
-
Gadal, O., Labarre, S., Boschiero, C. and Thuriaux, P. (2002) Hmo1, an HMG-box protein, belongs to the yeast ribosomal DNA transcription system. EMBO J., 21, 5498-5507. (Pubitemid 35231029)
-
(2002)
EMBO Journal
, vol.21
, Issue.20
, pp. 5498-5507
-
-
Gadal, O.1
Labarre, S.2
Boschiero, C.3
Thuriaux, P.4
-
52
-
-
55449124522
-
Transcription of multiple yeast ribosomal DNA genes requires targeting of UAF to the promoter by Uaf30
-
Hontz, R.D., French, S.L., Oakes, M.L., Tongaonkar, P., Nomura, M., Beyer, A.L. and Smith, J.S. (2008) Transcription of multiple yeast ribosomal DNA genes requires targeting of UAF to the promoter by Uaf30. Mol. Cell Biol., 28, 6709-6719.
-
(2008)
Mol. Cell Biol.
, vol.28
, pp. 6709-6719
-
-
Hontz, R.D.1
French, S.L.2
Oakes, M.L.3
Tongaonkar, P.4
Nomura, M.5
Beyer, A.L.6
Smith, J.S.7
-
53
-
-
43249097755
-
Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules
-
DOI 10.1101/gad.466908
-
Merz, K., Hondele, M., Goetze, H., Gmelch, K., Stoeckl, U. and Griesenbeck, J. (2008) Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules. Genes Dev., 22, 1190-1204. (Pubitemid 351656578)
-
(2008)
Genes and Development
, vol.22
, Issue.9
, pp. 1190-1204
-
-
Merz, K.1
Hondele, M.2
Goetze, H.3
Gmelch, K.4
Stoeckl, U.5
Griesenbeck, J.6
-
54
-
-
33846946112
-
RNA polymerase i in yeast transcribes dynamic nucleosomal rDNA
-
Jones, H.S., Kawauchi, J., Braglia, P., Alen, C.M., Kent, N.A. and Proudfoot, N.J. (2007) RNA polymerase I in yeast transcribes dynamic nucleosomal rDNA. Nat. Struct. Mol. Biol., 14, 123-130.
-
(2007)
Nat. Struct. Mol. Biol.
, vol.14
, pp. 123-130
-
-
Jones, H.S.1
Kawauchi, J.2
Braglia, P.3
Alen, C.M.4
Kent, N.A.5
Proudfoot, N.J.6
-
55
-
-
67849106506
-
Genetic identification of factors that modulate ribosomal DNA transcription in Saccharomyces cerevisiae
-
Hontz, R.D., Niederer, R.O., Johnson, J.M. and Smith, J.S. (2009) Genetic identification of factors that modulate ribosomal DNA transcription in Saccharomyces cerevisiae. Genetics, 182, 105-119.
-
(2009)
Genetics
, vol.182
, pp. 105-119
-
-
Hontz, R.D.1
Niederer, R.O.2
Johnson, J.M.3
Smith, J.S.4
-
56
-
-
16544382021
-
RNA polymerase i transcription and pre-rRNA processing are linked by specific SSU processome components
-
Gallagher, J.E., Dunbar, D.A., Granneman, S., Mitchell, B.M., Osheim, Y., Beyer, A.L. and Baserga, S.J. (2004) RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components. Genes Dev., 18, 2506-2517.
-
(2004)
Genes Dev.
, vol.18
, pp. 2506-2517
-
-
Gallagher, J.E.1
Dunbar, D.A.2
Granneman, S.3
Mitchell, B.M.4
Osheim, Y.5
Beyer, A.L.6
Baserga, S.J.7
-
57
-
-
10944222974
-
Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae
-
DOI 10.1016/j.molcel.2004.11.031, PII S1097276504007233
-
Osheim, Y.N., French, S.L., Keck, K.M., Champion, E.A., Spasov, K., Dragon, F., Baserga, S.J. and Beyer, A.L. (2004) Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae. Mol. Cell, 16, 943-954. (Pubitemid 40018404)
-
(2004)
Molecular Cell
, vol.16
, Issue.6
, pp. 943-954
-
-
Osheim, Y.N.1
French, S.L.2
Keck, K.M.3
Champion, E.A.4
Spasov, K.5
Dragon, F.6
Baserga, S.J.7
Beyer, A.L.8
-
58
-
-
77952547233
-
Ten years of NAD-dependent SIR2 family deacetylases: Implications for metabolic diseases
-
Imai, S. and Guarente, L. (2010) Ten years of NAD-dependent SIR2 family deacetylases: implications for metabolic diseases. Trends Pharmacol. Sci., 31, 212-220.
-
(2010)
Trends Pharmacol. Sci.
, vol.31
, pp. 212-220
-
-
Imai, S.1
Guarente, L.2
-
59
-
-
0035838432
-
Identification of human Asf1 chromatin assembly factors as substrates of Tousled-like kinases
-
DOI 10.1016/S0960-9822(01)00298-6
-
Sillje, H.H. and Nigg, E.A. (2001) Identification of human Asf1 chromatin assembly factors as substrates of Tousled-like kinases. Curr. Biol., 11, 1068-1073. (Pubitemid 32632724)
-
(2001)
Current Biology
, vol.11
, Issue.13
, pp. 1068-1073
-
-
Sillje, H.H.W.1
Nigg, E.A.2
-
60
-
-
2442605728
-
TOR Complex 1 Includes a Novel Component, Tco89p (YPL180w), and Cooperates with Ssd1p to Maintain Cellular Integrity in Saccharomyces cerevisiae
-
DOI 10.1074/jbc.M313062200
-
Reinke, A., Anderson, S., McCaffery, J.M., Yates, J. 3rd, Aronova, S., Chu, S., Fairclough, S., Iverson, C., Wedaman, K.P. and Powers, T. (2004) TOR complex 1 includes a novel component, Tco89p (YPL180w), and cooperates with Ssd1p to maintain cellular integrity in Saccharomyces cerevisiae. J. Biol. Chem., 279, 14752-14762. (Pubitemid 38618865)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.15
, pp. 14752-14762
-
-
Reinke, A.1
Anderson, S.2
McCaffery, J.M.3
Yates III, J.4
Aronova, S.5
Chu, S.6
Fairclough, S.7
Iverson, C.8
Wedaman, K.P.9
Powers, T.10
-
61
-
-
33646141366
-
Asf1 mediates histone eviction and deposition during elongation by RNA polymerase II
-
Schwabish, M.A. and Struhl, K. (2006) Asf1 mediates histone eviction and deposition during elongation by RNA polymerase II. Mol. Cell, 22, 415-422.
-
(2006)
Mol. Cell
, vol.22
, pp. 415-422
-
-
Schwabish, M.A.1
Struhl, K.2
-
62
-
-
0037370054
-
In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes
-
DOI 10.1128/MCB.23.5.1558-1568.2003
-
French, S.L., Osheim, Y.N., Cioci, F., Nomura, M. and Beyer, A.L. (2003) In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes. Mol. Cell Biol., 23, 1558-1568. (Pubitemid 36246038)
-
(2003)
Molecular and Cellular Biology
, vol.23
, Issue.5
, pp. 1558-1568
-
-
French, S.L.1
Osheim, Y.N.2
Cioci, F.3
Nomura, M.4
Beyer, A.L.5
-
63
-
-
33746631755
-
The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components
-
DOI 10.1101/gad.386106
-
Laferte, A., Favry, E., Sentenac, A., Riva, M., Carles, C. and Chedin, S. (2006) The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components. Genes Dev., 20, 2030-2040. (Pubitemid 44157455)
-
(2006)
Genes and Development
, vol.20
, Issue.15
, pp. 2030-2040
-
-
Laferte, A.1
Favry, E.2
Sentenac, A.3
Riva, M.4
Carles, C.5
Chedin, S.6
-
64
-
-
33846614928
-
Is ribosome synthesis controlled by Pol I transcription?
-
Chedin, S., Laferte, A., Hoang, T., Lafontaine, D.L. and Riva, M. and Carles, C (2007) Is ribosome synthesis controlled by pol I transcription? Cell Cycle, 6, 11-15. (Pubitemid 46173873)
-
(2007)
Cell Cycle
, vol.6
, Issue.1
, pp. 11-15
-
-
Chedin, S.1
Laferte, A.2
Hoang, T.3
Lafontaine, D.L.J.4
Riva, M.5
Carles, C.6
-
65
-
-
58549084410
-
How Saccharomyces responds to nutrients
-
Zaman, S., Lippman, S.I., Zhao, X. and Broach, J.R. (2008) How Saccharomyces responds to nutrients. Annu. Rev. Genet., 42, 27-81.
-
(2008)
Annu. Rev. Genet.
, vol.42
, pp. 27-81
-
-
Zaman, S.1
Lippman, S.I.2
Zhao, X.3
Broach, J.R.4
|