-
1
-
-
13344295095
-
Initiation of platelet adhesion by arrest onto fibrinogen or translocation on von Willebrand factor
-
Savage B, Saldivar E, Ruggeri ZM, (1996) Initiation of platelet adhesion by arrest onto fibrinogen or translocation on von Willebrand factor. Cell 84: 289-297.
-
(1996)
Cell
, vol.84
, pp. 289-297
-
-
Savage, B.1
Saldivar, E.2
Ruggeri, Z.M.3
-
2
-
-
0036851876
-
Platelets in atherothrombosis
-
Ruggeri ZM, (2002) Platelets in atherothrombosis. Nat Med 8: 1227-1234.
-
(2002)
Nat Med
, vol.8
, pp. 1227-1234
-
-
Ruggeri, Z.M.1
-
3
-
-
0027481159
-
Pseudo-von Willebrand disease: a mutation in the platelet glycoprotein Ib alpha gene associated with a hyperactive surface receptor
-
Russell SD, Roth GJ, (1993) Pseudo-von Willebrand disease: a mutation in the platelet glycoprotein Ib alpha gene associated with a hyperactive surface receptor. Blood 81: 1787-1791.
-
(1993)
Blood
, vol.81
, pp. 1787-1791
-
-
Russell, S.D.1
Roth, G.J.2
-
4
-
-
14544302314
-
New concepts in von Willebrand disease
-
Sadler JE, (2005) New concepts in von Willebrand disease. Annu Rev Med 56: 173-191.
-
(2005)
Annu Rev Med
, vol.56
, pp. 173-191
-
-
Sadler, J.E.1
-
5
-
-
0037119003
-
Structures of glycoprotein Ibalpha and its complex with von Willebrand factor A1 domain
-
Huizinga EG, Tsuji S, Romijn RA, Schiphorst ME, de Groot PG, et al. (2002) Structures of glycoprotein Ibalpha and its complex with von Willebrand factor A1 domain. Science 297: 1176-1179.
-
(2002)
Science
, vol.297
, pp. 1176-1179
-
-
Huizinga, E.G.1
Tsuji, S.2
Romijn, R.A.3
Schiphorst, M.E.4
de Groot, P.G.5
-
6
-
-
0037119606
-
Biomedicine. Contact-how platelets touch von Willebrand factor
-
Sadler JE, (2002) Biomedicine. Contact-how platelets touch von Willebrand factor. Science 297: 1128-1129.
-
(2002)
Science
, vol.297
, pp. 1128-1129
-
-
Sadler, J.E.1
-
7
-
-
2542480051
-
Crystal structure of the wild-type von Willebrand factor A1-glycoprotein Ibalpha complex reveals conformation differences with a complex bearing von Willebrand disease mutations
-
Dumas JJ, Kumar R, McDonagh T, Sullivan F, Stahl ML, et al. (2004) Crystal structure of the wild-type von Willebrand factor A1-glycoprotein Ibalpha complex reveals conformation differences with a complex bearing von Willebrand disease mutations. J Biol Chem 279: 23327-23334.
-
(2004)
J Biol Chem
, vol.279
, pp. 23327-23334
-
-
Dumas, J.J.1
Kumar, R.2
McDonagh, T.3
Sullivan, F.4
Stahl, M.L.5
-
8
-
-
51049096157
-
Flow-induced structural transition in the beta-switch region of glycoprotein Ib
-
Chen Z, Lou J, Zhu C, Schulten K, (2008) Flow-induced structural transition in the beta-switch region of glycoprotein Ib. Biophys J 95: 1303-1313.
-
(2008)
Biophys J
, vol.95
, pp. 1303-1313
-
-
Chen, Z.1
Lou, J.2
Zhu, C.3
Schulten, K.4
-
9
-
-
52949106471
-
Flow induces loop-to-beta-hairpin transition on the beta-switch of platelet glycoprotein Ib alpha
-
Lou J, Zhu C, (2008) Flow induces loop-to-beta-hairpin transition on the beta-switch of platelet glycoprotein Ib alpha. Proc Natl Acad Sci U S A 105: 13847-13852.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 13847-13852
-
-
Lou, J.1
Zhu, C.2
-
10
-
-
51349154185
-
Platelet glycoprotein Ibalpha forms catch bonds with human WT vWF but not with type 2B von Willebrand disease vWF
-
Yago T, Lou J, Wu T, Yang J, Miner JJ, et al. (2008) Platelet glycoprotein Ibalpha forms catch bonds with human WT vWF but not with type 2B von Willebrand disease vWF. J Clin Invest 118: 3195-3207.
-
(2008)
J Clin Invest
, vol.118
, pp. 3195-3207
-
-
Yago, T.1
Lou, J.2
Wu, T.3
Yang, J.4
Miner, J.J.5
-
11
-
-
12944317287
-
Requirement of leucine-rich repeats of glycoprotein (GP) Ibalpha for shear-dependent and static binding of von Willebrand factor to the platelet membrane GP Ib-IX-V complex
-
Shen Y, Romo GM, Dong JF, Schade A, McIntire LV, et al. (2000) Requirement of leucine-rich repeats of glycoprotein (GP) Ibalpha for shear-dependent and static binding of von Willebrand factor to the platelet membrane GP Ib-IX-V complex. Blood 95: 903-910.
-
(2000)
Blood
, vol.95
, pp. 903-910
-
-
Shen, Y.1
Romo, G.M.2
Dong, J.F.3
Schade, A.4
McIntire, L.V.5
-
12
-
-
0035437196
-
Epitope mapping of inhibitory antibodies against platelet glycoprotein Ibalpha reveals interaction between the leucine-rich repeat N-terminal and C-terminal flanking domains of glycoprotein Ibalpha
-
Cauwenberghs N, Vanhoorelbeke K, Vauterin S, Westra DF, Romo G, et al. (2001) Epitope mapping of inhibitory antibodies against platelet glycoprotein Ibalpha reveals interaction between the leucine-rich repeat N-terminal and C-terminal flanking domains of glycoprotein Ibalpha. Blood 98: 652-660.
-
(2001)
Blood
, vol.98
, pp. 652-660
-
-
Cauwenberghs, N.1
Vanhoorelbeke, K.2
Vauterin, S.3
Westra, D.F.4
Romo, G.5
-
13
-
-
34548105614
-
Two novel monoclonal antibodies to VWFA3 inhibit VWF-collagen and VWF-platelet interactions
-
Zhao Y, Dong N, Shen F, Xie L, He Y, et al. (2007) Two novel monoclonal antibodies to VWFA3 inhibit VWF-collagen and VWF-platelet interactions. J Thromb Haemost 5: 1963-1970.
-
(2007)
J Thromb Haemost
, vol.5
, pp. 1963-1970
-
-
Zhao, Y.1
Dong, N.2
Shen, F.3
Xie, L.4
He, Y.5
-
14
-
-
0034101943
-
Antithrombotic effect of platelet glycoprotein Ib-blocking monoclonal antibody Fab fragments in nonhuman primates
-
Cauwenberghs N, Meiring M, Vauterin S, van Wyk V, Lamprecht S, et al. (2000) Antithrombotic effect of platelet glycoprotein Ib-blocking monoclonal antibody Fab fragments in nonhuman primates. Arterioscler Thromb Vasc Biol 20: 1347-1353.
-
(2000)
Arterioscler Thromb Vasc Biol
, vol.20
, pp. 1347-1353
-
-
Cauwenberghs, N.1
Meiring, M.2
Vauterin, S.3
van Wyk, V.4
Lamprecht, S.5
-
15
-
-
0036162199
-
Inhibition of platelet glycoprotein Ib, glycoprotein IIb/IIIa, or both by monoclonal antibodies prevents arterial thrombosis in baboons
-
Wu D, Meiring M, Kotze HF, Deckmyn H, Cauwenberghs N, (2002) Inhibition of platelet glycoprotein Ib, glycoprotein IIb/IIIa, or both by monoclonal antibodies prevents arterial thrombosis in baboons. Arterioscler Thromb Vasc Biol 22: 323-328.
-
(2002)
Arterioscler Thromb Vasc Biol
, vol.22
, pp. 323-328
-
-
Wu, D.1
Meiring, M.2
Kotze, H.F.3
Deckmyn, H.4
Cauwenberghs, N.5
-
16
-
-
34548150202
-
Paratope and epitope mapping of the antithrombotic antibody 6B4 in complex with platelet glycoprotein Ibalpha
-
Fontayne A, De Maeyer B, De Maeyer M, Yamashita M, Matsushita T, et al. (2007) Paratope and epitope mapping of the antithrombotic antibody 6B4 in complex with platelet glycoprotein Ibalpha. J Biol Chem 282: 23517-23524.
-
(2007)
J Biol Chem
, vol.282
, pp. 23517-23524
-
-
Fontayne, A.1
De Maeyer, B.2
De Maeyer, M.3
Yamashita, M.4
Matsushita, T.5
-
17
-
-
33646943202
-
Molecular dynamics: Survey of methods for simulating the activity of proteins
-
Adcock SA, McCammon JA, (2006) Molecular dynamics: Survey of methods for simulating the activity of proteins. Chemical Reviews 106: 1589-1615.
-
(2006)
Chemical Reviews
, vol.106
, pp. 1589-1615
-
-
Adcock, S.A.1
McCammon, J.A.2
-
18
-
-
81855213103
-
Advances in Experiments and Modeling in Micro- and Nano-Biomechanics: A Mini Review
-
Long M, Sato M, Lim CT, Wu JH, Adachi T, et al. (2011) Advances in Experiments and Modeling in Micro- and Nano-Biomechanics: A Mini Review. Cellular and Molecular Bioengineering 4: 327-339.
-
(2011)
Cellular and Molecular Bioengineering
, vol.4
, pp. 327-339
-
-
Long, M.1
Sato, M.2
Lim, C.T.3
Wu, J.H.4
Adachi, T.5
-
19
-
-
4544232865
-
Molecular modeling of the von Willebrand factor A2 domain and the effects of associated type 2A von Willebrand disease mutations
-
Weaver DF, Sutherland JJ, O'Brien LA, Lillicrap D, (2004) Molecular modeling of the von Willebrand factor A2 domain and the effects of associated type 2A von Willebrand disease mutations. Journal of Molecular Modeling 10: 259-270.
-
(2004)
Journal of Molecular Modeling
, vol.10
, pp. 259-270
-
-
Weaver, D.F.1
Sutherland, J.J.2
O'Brien, L.A.3
Lillicrap, D.4
-
20
-
-
81855182080
-
Conformational Transition of Glycoprotein Ib alpha Mutants in Flow Molecular Dynamics Simulation
-
Huang QS, Lou JZ, Wu JH, Zhu C, (2011) Conformational Transition of Glycoprotein Ib alpha Mutants in Flow Molecular Dynamics Simulation. Cellular and Molecular Bioengineering 4: 495-504.
-
(2011)
Cellular and Molecular Bioengineering
, vol.4
, pp. 495-504
-
-
Huang, Q.S.1
Lou, J.Z.2
Wu, J.H.3
Zhu, C.4
-
21
-
-
77955836302
-
The catch bond mechanism between von Willebrand factor and platelet surface receptors investigated by molecular dynamics simulations
-
Interlandi G, Thomas W, (2010) The catch bond mechanism between von Willebrand factor and platelet surface receptors investigated by molecular dynamics simulations. Proteins 78: 2506-2522.
-
(2010)
Proteins
, vol.78
, pp. 2506-2522
-
-
Interlandi, G.1
Thomas, W.2
-
22
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
-
23
-
-
0037212339
-
IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains
-
Lefranc MP, Pommie C, Ruiz M, Giudicelli V, Foulquier E, et al. (2003) IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains. Dev Comp Immunol 27: 55-77.
-
(2003)
Dev Comp Immunol
, vol.27
, pp. 55-77
-
-
Lefranc, M.P.1
Pommie, C.2
Ruiz, M.3
Giudicelli, V.4
Foulquier, E.5
-
24
-
-
0031574072
-
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG, (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
25
-
-
0027136282
-
Comparative protein modelling by satisfaction of spatial restraints
-
Sali A, Blundell TL, (1993) Comparative protein modelling by satisfaction of spatial restraints. J Mol Biol 234: 779-815.
-
(1993)
J Mol Biol
, vol.234
, pp. 779-815
-
-
Sali, A.1
Blundell, T.L.2
-
26
-
-
0037464822
-
Generation and characterization of recombinant single chain Fv antibody that recognizes platelet glycoprotein Ibalpha
-
Dai K, Zhu H, Ruan C, (2003) Generation and characterization of recombinant single chain Fv antibody that recognizes platelet glycoprotein Ibalpha. Thromb Res 109: 137-144.
-
(2003)
Thromb Res
, vol.109
, pp. 137-144
-
-
Dai, K.1
Zhu, H.2
Ruan, C.3
-
27
-
-
51749110001
-
Structure and dynamics of the anti-AMCV scFv(F8): effects of selected mutations on the antigen combining site
-
Arcangeli C, Cantale C, Galeffi P, Rosato V, (2008) Structure and dynamics of the anti-AMCV scFv(F8): effects of selected mutations on the antigen combining site. J Struct Biol 164: 119-133.
-
(2008)
J Struct Biol
, vol.164
, pp. 119-133
-
-
Arcangeli, C.1
Cantale, C.2
Galeffi, P.3
Rosato, V.4
-
28
-
-
70450274968
-
High resolution NMR-based model for the structure of a scFv-IL-1beta complex: potential for NMR as a key tool in therapeutic antibody design and development
-
Wilkinson IC, Hall CJ, Veverka V, Shi JY, Muskett FW, et al. (2009) High resolution NMR-based model for the structure of a scFv-IL-1beta complex: potential for NMR as a key tool in therapeutic antibody design and development. J Biol Chem 284: 31928-31935.
-
(2009)
J Biol Chem
, vol.284
, pp. 31928-31935
-
-
Wilkinson, I.C.1
Hall, C.J.2
Veverka, V.3
Shi, J.Y.4
Muskett, F.W.5
-
29
-
-
35449008122
-
Integrating statistical pair potentials into protein complex prediction
-
Mintseris J, Pierce B, Wiehe K, Anderson R, Chen R, et al. (2007) Integrating statistical pair potentials into protein complex prediction. Proteins 69: 511-520.
-
(2007)
Proteins
, vol.69
, pp. 511-520
-
-
Mintseris, J.1
Pierce, B.2
Wiehe, K.3
Anderson, R.4
Chen, R.5
-
30
-
-
34248513078
-
ZRANK: reranking protein docking predictions with an optimized energy function
-
Pierce B, Weng Z, (2007) ZRANK: reranking protein docking predictions with an optimized energy function. Proteins 67: 1078-1086.
-
(2007)
Proteins
, vol.67
, pp. 1078-1086
-
-
Pierce, B.1
Weng, Z.2
-
31
-
-
44949117092
-
A combination of rescoring and refinement significantly improves protein docking performance
-
Pierce B, Weng Z, (2008) A combination of rescoring and refinement significantly improves protein docking performance. Proteins 72: 270-279.
-
(2008)
Proteins
, vol.72
, pp. 270-279
-
-
Pierce, B.1
Weng, Z.2
-
33
-
-
43249104982
-
PSAIA - protein structure and interaction analyzer
-
Mihel J, Sikic M, Tomic S, Jeren B, Vlahovicek K, (2008) PSAIA- protein structure and interaction analyzer. BMC Struct Biol 8: 21.
-
(2008)
BMC Struct Biol
, vol.8
, pp. 21
-
-
Mihel, J.1
Sikic, M.2
Tomic, S.3
Jeren, B.4
Vlahovicek, K.5
-
34
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
Phillips JC, Braun R, Wang W, Gumbart J, Tajkhorshid E, et al. (2005) Scalable molecular dynamics with NAMD. J Comput Chem 26: 1781-1802.
-
(2005)
J Comput Chem
, vol.26
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
-
35
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of proteins
-
MacKerell AD, Bashford D, Bellott M, Dunbrack RL, Evanseck JD, et al. (1998) All-atom empirical potential for molecular modeling and dynamics studies of proteins. Journal of Physical Chemistry B 102: 3586-3616.
-
(1998)
Journal of Physical Chemistry B
, vol.102
, pp. 3586-3616
-
-
MacKerell, A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack, R.L.4
Evanseck, J.D.5
-
36
-
-
77955095256
-
Mechanism of CDK5 activation revealed by steered molecular dynamics simulations and energy calculations
-
Zhang B, Su ZC, Tay TE, Tan VB, (2010) Mechanism of CDK5 activation revealed by steered molecular dynamics simulations and energy calculations. Journal of Molecular Modeling 16: 1159-1168.
-
(2010)
Journal of Molecular Modeling
, vol.16
, pp. 1159-1168
-
-
Zhang, B.1
Su, Z.C.2
Tay, T.E.3
Tan, V.B.4
-
37
-
-
0035003803
-
Steered molecular dynamics investigations of protein function
-
Isralewitz B, Baudry J, Gullingsrud J, Kosztin D, Schulten K, (2001) Steered molecular dynamics investigations of protein function. J Mol Graph Model 19: 13-25.
-
(2001)
J Mol Graph Model
, vol.19
, pp. 13-25
-
-
Isralewitz, B.1
Baudry, J.2
Gullingsrud, J.3
Kosztin, D.4
Schulten, K.5
-
38
-
-
0037442962
-
HADDOCK: a protein-protein docking approach based on biochemical or biophysical information
-
Dominguez C, Boelens R, Bonvin AM, (2003) HADDOCK: a protein-protein docking approach based on biochemical or biophysical information. J Am Chem Soc 125: 1731-1737.
-
(2003)
J Am Chem Soc
, vol.125
, pp. 1731-1737
-
-
Dominguez, C.1
Boelens, R.2
Bonvin, A.M.3
|