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Volumn 11, Issue 8, 2012, Pages 422-434

Quantitative analysis of energy metabolic pathways in MCF-7 breast cancer cells by selected reaction monitoring assay

Author keywords

[No Author keywords available]

Indexed keywords

ESTRADIOL; GLUCOSE; GLUCOSE 6 PHOSPHATE DEHYDROGENASE; ISOCITRATE DEHYDROGENASE 2; PENTOSE PHOSPHATE;

EID: 84863628292     PISSN: 15359476     EISSN: 15359484     Source Type: Journal    
DOI: 10.1074/mcp.M111.015214     Document Type: Article
Times cited : (75)

References (56)
  • 1
    • 8144228566 scopus 로고    scopus 로고
    • Why do cancers have high aerobic glycolysis?
    • Gatenby, R. A., and Gillies, R. J. (2004) Why do cancers have high aerobic glycolysis? Nat. Rev. Cancer 4, 891-899
    • (2004) Nat. Rev. Cancer , vol.4 , pp. 891-899
    • Gatenby, R.A.1    Gillies, R.J.2
  • 2
    • 37449024702 scopus 로고    scopus 로고
    • The biology of cancer: Metabolic reprogramming fuels cell growth and proliferation
    • DeBerardinis, R. J., Lum, J. J., Hatzivassiliou, G., and Thompson, C. B. (2008) The biology of cancer: metabolic reprogramming fuels cell growth and proliferation. Cell Metab. 7, 11-20
    • (2008) Cell Metab. , vol.7 , pp. 11-20
    • DeBerardinis, R.J.1    Lum, J.J.2    Hatzivassiliou, G.3    Thompson, C.B.4
  • 3
    • 0001221508 scopus 로고
    • On respiratory impairment in cancer cells
    • Warburg, O. (1956) On respiratory impairment in cancer cells. Science 124, 269-270
    • (1956) Science , vol.124 , pp. 269-270
    • Warburg, O.1
  • 4
    • 79952284127 scopus 로고    scopus 로고
    • Hallmarks of cancer: The next generation
    • Hanahan, D., and Weinberg, R. A. (2011) Hallmarks of cancer: the next generation. Cell 144, 646-674
    • (2011) Cell , vol.144 , pp. 646-674
    • Hanahan, D.1    Weinberg, R.A.2
  • 8
    • 17844383964 scopus 로고    scopus 로고
    • Perturbational profiling of a cell-line model of tumorigenesis by using metabolic measurements
    • Ramanathan, A., Wang, C., and Schreiber, S. L. (2005) Perturbational profiling of a cell-line model of tumorigenesis by using metabolic measurements. Proc. Natl. Acad. Sci. U.S.A. 102, 5992-5997
    • (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 5992-5997
    • Ramanathan, A.1    Wang, C.2    Schreiber, S.L.3
  • 12
    • 0036717382 scopus 로고    scopus 로고
    • Molecular imaging of cancer with positron emission tomography
    • Gambhir, S. S. (2002) Molecular imaging of cancer with positron emission tomography. Nat. Rev. Cancer 2, 683-693
    • (2002) Nat. Rev. Cancer , vol.2 , pp. 683-693
    • Gambhir, S.S.1
  • 14
    • 77949967131 scopus 로고    scopus 로고
    • Targeting metabolic transformation for cancer therapy
    • Tennant, D. A., Durán, R. V., and Gottlieb, E. (2010) Targeting metabolic transformation for cancer therapy. Nat. Rev. Cancer 10, 267-277
    • (2010) Nat. Rev. Cancer , vol.10 , pp. 267-277
    • Tennant, D.A.1    Durán, R.V.2    Gottlieb, E.3
  • 15
    • 68749094119 scopus 로고    scopus 로고
    • Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics
    • Picotti, P., Bodenmiller, B., Mueller, L. N., Domon, B., and Aebersold, R. (2009) Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics. Cell 138, 795-806
    • (2009) Cell , vol.138 , pp. 795-806
    • Picotti, P.1    Bodenmiller, B.2    Mueller, L.N.3    Domon, B.4    Aebersold, R.5
  • 16
    • 79551600149 scopus 로고    scopus 로고
    • Comprehensive quantitative analysis of central carbon and amino-acid metabolism in Saccharomyces cerevisiae under multiple conditions by targeted proteomics
    • Costenoble, R., Picotti, P., Reiter, L., Stallmach, R., Heinemann, M., Sauer, U., and Aebersold, R. (2011) Comprehensive quantitative analysis of central carbon and amino-acid metabolism in Saccharomyces cerevisiae under multiple conditions by targeted proteomics. Mol. Syst. Biol. 7, 464
    • (2011) Mol. Syst. Biol. , vol.7 , pp. 464
    • Costenoble, R.1    Picotti, P.2    Reiter, L.3    Stallmach, R.4    Heinemann, M.5    Sauer, U.6    Aebersold, R.7
  • 18
    • 77949822351 scopus 로고    scopus 로고
    • Combinatorial peptide libraries facilitate development of multiple reaction monitoring assays for low-abundance proteins
    • Drabovich, A. P., and Diamandis, E. P. (2010) Combinatorial peptide libraries facilitate development of multiple reaction monitoring assays for low-abundance proteins. J. Proteome Res. 9, 1236-1245
    • (2010) J. Proteome Res. , vol.9 , pp. 1236-1245
    • Drabovich, A.P.1    Diamandis, E.P.2
  • 19
    • 80054044048 scopus 로고    scopus 로고
    • Integrated proteomic profiling of cell line conditioned media and pancreatic juice for the identification of pancreatic cancer biomarkers
    • 10.1074/mcp.M111.008599
    • Makawita, S., Smith, C., Batruch, I., Zheng, Y., Ruckert, F., Grutzmann, R., Pilarsky, C., Gallinger, S., and Diamandis, E. P. (2011) Integrated proteomic profiling of cell line conditioned media and pancreatic juice for the identification of pancreatic cancer biomarkers. Mol. Cell. Proteomics 10, 10.1074/mcp.M111.008599
    • (2011) Mol. Cell. Proteomics , vol.10
    • Makawita, S.1    Smith, C.2    Batruch, I.3    Zheng, Y.4    Ruckert, F.5    Grutzmann, R.6    Pilarsky, C.7    Gallinger, S.8    Diamandis, E.P.9
  • 20
    • 83055168541 scopus 로고    scopus 로고
    • Verification of male infertility biomarkers in seminal plasma by multiplex selected reaction monitoring assay
    • 10.1074/mcp.M110.004127
    • Drabovich, A. P., Jarvi, K., and Diamandis, E. P. (2011) Verification of male infertility biomarkers in seminal plasma by multiplex selected reaction monitoring assay. Mol. Cell. Proteomics 10, 10.1074/mcp.M110.004127
    • (2011) Mol. Cell. Proteomics , vol.10
    • Drabovich, A.P.1    Jarvi, K.2    Diamandis, E.P.3
  • 21
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y., and Hochberg, Y. (1995) Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. Roy. Statist. Soc. 57, 289-300
    • (1995) J. Roy. Statist. Soc. , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 22
    • 0242291099 scopus 로고    scopus 로고
    • Enzyme-friendly, mass spectrometry-compatible surfactant for in-solution enzymatic digestion of proteins
    • Yu, Y. Q., Gilar, M., Lee, P. J., Bouvier, E. S., and Gebler, J. C. (2003) Enzyme-friendly, mass spectrometry-compatible surfactant for in-solution enzymatic digestion of proteins. Anal. Chem. 75, 6023-6028
    • (2003) Anal. Chem. , vol.75 , pp. 6023-6028
    • Yu, Y.Q.1    Gilar, M.2    Lee, P.J.3    Bouvier, E.S.4    Gebler, J.C.5
  • 24
    • 67049132416 scopus 로고    scopus 로고
    • Expediting the development of targeted SRM assays: Using data from shotgun proteomics to automate method development
    • Prakash, A., Tomazela, D. M., Frewen, B., Maclean, B., Merrihew, G., Peterman, S., and Maccoss, M. J. (2009) Expediting the development of targeted SRM assays: using data from shotgun proteomics to automate method development. J. Proteome Res. 8, 2733-2739
    • (2009) J. Proteome Res. , vol.8 , pp. 2733-2739
    • Prakash, A.1    Tomazela, D.M.2    Frewen, B.3    Maclean, B.4    Merrihew, G.5    Peterman, S.6    Maccoss, M.J.7
  • 25
    • 23144442824 scopus 로고    scopus 로고
    • Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides
    • Beynon, R. J., Doherty, M. K., Pratt, J. M., and Gaskell, S. J. (2005) Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides. Nat. Methods 2, 587-589
    • (2005) Nat. Methods , vol.2 , pp. 587-589
    • Beynon, R.J.1    Doherty, M.K.2    Pratt, J.M.3    Gaskell, S.J.4
  • 26
    • 65249113798 scopus 로고    scopus 로고
    • Stable isotope dilution multidimensional liquid chromatography-tandem mass spectrometry for pancreatic cancer serum biomarker discovery
    • Yu, K. H., Barry, C. G., Austin, D., Busch, C. M., Sangar, V., Rustgi, A. K., and Blair, I. A. (2009) Stable isotope dilution multidimensional liquid chromatography-tandem mass spectrometry for pancreatic cancer serum biomarker discovery. J. Proteome Res. 8, 1565-1576
    • (2009) J. Proteome Res. , vol.8 , pp. 1565-1576
    • Yu, K.H.1    Barry, C.G.2    Austin, D.3    Busch, C.M.4    Sangar, V.5    Rustgi, A.K.6    Blair, I.A.7
  • 27
    • 77952226764 scopus 로고    scopus 로고
    • Super-SILAC mix for quantitative proteomics of human tumor tissue
    • Geiger, T., Cox, J., Ostasiewicz, P., Wisniewski, J. R., and Mann, M. (2010) Super-SILAC mix for quantitative proteomics of human tumor tissue. Nat. Methods 7, 383-385
    • (2010) Nat. Methods , vol.7 , pp. 383-385
    • Geiger, T.1    Cox, J.2    Ostasiewicz, P.3    Wisniewski, J.R.4    Mann, M.5
  • 29
    • 0030293823 scopus 로고    scopus 로고
    • Triiodothyronine mimics the effects of estrogen in breast cancer cell lines
    • Nogueira, C. R., and Brentani, M. M. (1996) Triiodothyronine mimics the effects of estrogen in breast cancer cell lines. J. Steroid Biochem. Mol. Biol. 59, 271-279
    • (1996) J. Steroid Biochem. Mol. Biol. , vol.59 , pp. 271-279
    • Nogueira, C.R.1    Brentani, M.M.2
  • 30
    • 20544465006 scopus 로고    scopus 로고
    • Electrophoretic prefractionation for comprehensive analysis of proteomes
    • Speicher, D. W., ed. Elsevier Science, New York
    • Zuo, X., Lee, K., and Speicher, DW (2004) Electrophoretic prefractionation for comprehensive analysis of proteomes. In: Speicher, D. W., ed. Proteome Analysis: Interpreting the Genome, pp. 93-115, Elsevier Science, New York.
    • (2004) Proteome Analysis: Interpreting the Genome , pp. 93-115
    • Zuo, X.1    Lee, K.2    Speicher, D.W.3
  • 31
    • 75249085783 scopus 로고    scopus 로고
    • Methods for combining peptide intensities to estimate relative protein abundance
    • Carrillo, B., Yanofsky, C., Laboissiere, S., Nadon, R., and Kearney, R. E. (2010) Methods for combining peptide intensities to estimate relative protein abundance. Bioinformatics 26, 98-103
    • (2010) Bioinformatics , vol.26 , pp. 98-103
    • Carrillo, B.1    Yanofsky, C.2    Laboissiere, S.3    Nadon, R.4    Kearney, R.E.5
  • 32
    • 0024994978 scopus 로고
    • Selection and analysis of galactose metabolic pathway variants of a mouse liver cell line
    • Zaret, K. S., and Stevens, K. A. (1990) Selection and analysis of galactose metabolic pathway variants of a mouse liver cell line. Mol. Cell. Biol. 10, 4582-4589
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 4582-4589
    • Zaret, K.S.1    Stevens, K.A.2
  • 33
    • 33751086440 scopus 로고    scopus 로고
    • Hypoxia results in an HIF-1-dependent induction of brain-specific aldolase C in lung epithelial cells
    • Jean, J. C., Rich, C. B., and Joyce-Brady, M. (2006) Hypoxia results in an HIF-1-dependent induction of brain-specific aldolase C in lung epithelial cells. Am. J. Physiol. Lung Cell Mol. Physiol. 291, L950-956
    • (2006) Am. J. Physiol. Lung Cell Mol. Physiol. , vol.291
    • Jean, J.C.1    Rich, C.B.2    Joyce-Brady, M.3
  • 34
    • 60549083256 scopus 로고    scopus 로고
    • Regulation of cancer cell metabolism by hypoxiainducible factor 1
    • Semenza, G. L. (2009) Regulation of cancer cell metabolism by hypoxiainducible factor 1. Semin. Cancer Biol. 19, 12-16
    • (2009) Semin. Cancer Biol. , vol.19 , pp. 12-16
    • Semenza, G.L.1
  • 35
    • 33646765735 scopus 로고    scopus 로고
    • Gene expression profiling reveals the profound upregulation of hypoxia-responsive genes in primary human astrocytes
    • Mense, S. M., Sengupta, A., Zhou, M., Lan, C., Bentsman, G., Volsky, D. J., and Zhang, L. (2006) Gene expression profiling reveals the profound upregulation of hypoxia-responsive genes in primary human astrocytes. Physiol. Genomics 25, 435-449
    • (2006) Physiol. Genomics , vol.25 , pp. 435-449
    • Mense, S.M.1    Sengupta, A.2    Zhou, M.3    Lan, C.4    Bentsman, G.5    Volsky, D.J.6    Zhang, L.7
  • 36
    • 0037133736 scopus 로고    scopus 로고
    • Identification of an additional hypoxia responsive element in the glyceraldehyde-3-phosphate dehydrogenase gene promoter
    • Lu, S., Gu, X., Hoestje, S., and Epner, D. E. (2002) Identification of an additional hypoxia responsive element in the glyceraldehyde-3-phosphate dehydrogenase gene promoter. Biochim. Biophys. Acta 1574, 152-156
    • (2002) Biochim. Biophys. Acta , vol.1574 , pp. 152-156
    • Lu, S.1    Gu, X.2    Hoestje, S.3    Epner, D.E.4
  • 37
    • 77952300971 scopus 로고    scopus 로고
    • Genome-wide identification of hypoxia-inducible factor binding sites and target genes by a probabilistic model integrating transcription-profiling data and in silico binding site prediction
    • Ortiz-Barahona, A., Villar, D., Pescador, N., Amigo, J., and del Peso, L. (2010) Genome-wide identification of hypoxia-inducible factor binding sites and target genes by a probabilistic model integrating transcription-profiling data and in silico binding site prediction. Nucleic Acids Res. 38, 2332-2345
    • (2010) Nucleic Acids Res. , vol.38 , pp. 2332-2345
    • Ortiz-Barahona, A.1    Villar, D.2    Pescador, N.3    Amigo, J.4    Del Peso, L.5
  • 38
    • 69049111041 scopus 로고    scopus 로고
    • An integrative genomics approach identifies Hypoxia Inducible Factor-1 (HIF-1)-target genes that form the core response to hypoxia
    • Benita, Y., Kikuchi, H., Smith, A. D., Zhang, M. Q., Chung, D. C., and Xavier, R. J. (2009) An integrative genomics approach identifies Hypoxia Inducible Factor-1 (HIF-1)-target genes that form the core response to hypoxia. Nucleic Acids Res. 37, 4587-4602
    • (2009) Nucleic Acids Res. , vol.37 , pp. 4587-4602
    • Benita, Y.1    Kikuchi, H.2    Smith, A.D.3    Zhang, M.Q.4    Chung, D.C.5    Xavier, R.J.6
  • 39
    • 79955033732 scopus 로고    scopus 로고
    • Hypoxia-inducible factor 1 alpha represses the transcription of the estrogen receptor alpha gene in human breast cancer cells
    • Ryu, K., Park, C., and Lee, Y. (2011) Hypoxia-inducible factor 1 alpha represses the transcription of the estrogen receptor alpha gene in human breast cancer cells. Biochem. Biophys. Res. Commun. 407, 831-836
    • (2011) Biochem. Biophys. Res. Commun. , vol.407 , pp. 831-836
    • Ryu, K.1    Park, C.2    Lee, Y.3
  • 43
    • 20444452059 scopus 로고    scopus 로고
    • A novel antiestrogenic mechanism in progesterone receptor-transfected breast cancer cells
    • Zheng, Z. Y., Bay, B. H., Aw, S. E., and Lin, V. C. (2005) A novel antiestrogenic mechanism in progesterone receptor-transfected breast cancer cells. J. Biol. Chem. 280, 17480-17487
    • (2005) J. Biol. Chem. , vol.280 , pp. 17480-17487
    • Zheng, Z.Y.1    Bay, B.H.2    Aw, S.E.3    Lin, V.C.4
  • 48
    • 79952280229 scopus 로고    scopus 로고
    • P53 regulates biosynthesis through direct inactivation of glucose-6-phosphate dehydrogenase
    • Jiang, P., Du, W., Wang, X., Mancuso, A., Gao, X., Wu, M., and Yang, X. (2011) p53 regulates biosynthesis through direct inactivation of glucose-6-phosphate dehydrogenase. Nat. Cell Biol. 13, 310-316
    • (2011) Nat. Cell Biol. , vol.13 , pp. 310-316
    • Jiang, P.1    Du, W.2    Wang, X.3    Mancuso, A.4    Gao, X.5    Wu, M.6    Yang, X.7
  • 50
    • 77954697566 scopus 로고    scopus 로고
    • Isocitrate dehydrogenase 1 and 2 mutations in cancer: Alterations at a crossroads of cellular metabolism
    • Reitman, Z. J., and Yan, H. (2010) Isocitrate dehydrogenase 1 and 2 mutations in cancer: alterations at a crossroads of cellular metabolism. J. Natl. Cancer Inst. 102, 932-941
    • (2010) J. Natl. Cancer Inst. , vol.102 , pp. 932-941
    • Reitman, Z.J.1    Yan, H.2
  • 51
    • 84860508745 scopus 로고    scopus 로고
    • Proteomic portrait of human breast cancer progression identifies novel prognostic markers
    • Geiger, T., Madden, S. F., Gallagher, W. M., Cox, J., and Mann, M. (2012) Proteomic portrait of human breast cancer progression identifies novel prognostic markers. Cancer Res. 72, 2428-2439
    • (2012) Cancer Res. , vol.72 , pp. 2428-2439
    • Geiger, T.1    Madden, S.F.2    Gallagher, W.M.3    Cox, J.4    Mann, M.5
  • 53
    • 77957329708 scopus 로고    scopus 로고
    • Defining central themes in breast cancer biology by differential proteomics: Conserved regulation of cell spreading and focal adhesion kinase
    • Bateman, N. W., Sun, M., Hood, B. L., Flint, M. S., and Conrads, T. P. (2010) Defining central themes in breast cancer biology by differential proteomics: conserved regulation of cell spreading and focal adhesion kinase. J. Proteome Res. 9, 5311-5324
    • (2010) J. Proteome Res. , vol.9 , pp. 5311-5324
    • Bateman, N.W.1    Sun, M.2    Hood, B.L.3    Flint, M.S.4    Conrads, T.P.5
  • 54
  • 55
    • 77955983759 scopus 로고    scopus 로고
    • Activity-based protein profiling for biochemical pathway discovery in cancer
    • Nomura, D. K., Dix, M. M., and Cravatt, B. F. (2010) Activity-based protein profiling for biochemical pathway discovery in cancer. Nat. Rev. Cancer 10, 630-638
    • (2010) Nat. Rev. Cancer , vol.10 , pp. 630-638
    • Nomura, D.K.1    Dix, M.M.2    Cravatt, B.F.3


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