메뉴 건너뛰기




Volumn 194, Issue 6, 2012, Pages 1331-1341

Evolutionary link between the mycobacterial pLAsmid pal5000 replication protein RepB and the extracytoplasmic function family of σ factors

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; ARGININE; HELICASE; PROTEIN REPB; UNCLASSIFIED DRUG;

EID: 84863288261     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.06218-11     Document Type: Article
Times cited : (3)

References (66)
  • 1
    • 0342549243 scopus 로고    scopus 로고
    • A Brevibacterium linens pRBL1 replicon functional in Corynebacterium glutamicum
    • Ankri S, Bouvier I, Reyes O, Predali F, Leblon G. 1996. A Brevibacterium linens pRBL1 replicon functional in Corynebacterium glutamicum. Plasmid 36:36-41.
    • (1996) Plasmid , vol.36 , pp. 36-41
    • Ankri, S.1    Bouvier, I.2    Reyes, O.3    Predali, F.4    Leblon, G.5
  • 2
  • 3
    • 32144432437 scopus 로고    scopus 로고
    • The SWISS-MODEL workspace: a Web-based environment for protein structure homology modelling
    • Arnold K, Bordoli L, Kopp J, Schwede T. 2006. The SWISS-MODEL workspace: a Web-based environment for protein structure homology modelling. Bioinformatics 22:195-201.
    • (2006) Bioinformatics , vol.22 , pp. 195-201
    • Arnold, K.1    Bordoli, L.2    Kopp, J.3    Schwede, T.4
  • 4
    • 0030965301 scopus 로고    scopus 로고
    • Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10= motif at promoters
    • Barne KA, Bown JA, Busby SJ, Minchin SD. 1997. Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10= motif at promoters. EMBO J. 16:4034- 4040.
    • (1997) EMBO J , vol.16 , pp. 4034-4040
    • Barne, K.A.1    Bown, J.A.2    Busby, S.J.3    Minchin, S.D.4
  • 5
    • 0346024118 scopus 로고    scopus 로고
    • Translational coupling to an upstream gene promotes folding of the mycobacterial plasmid pAL5000 replication protein RepB and thereby its origin binding activity
    • Basu A, Chatterjee S, Das Gupta SK. 2004. Translational coupling to an upstream gene promotes folding of the mycobacterial plasmid pAL5000 replication protein RepB and thereby its origin binding activity. J. Bacteriol. 186:335-342.
    • (2004) J. Bacteriol. , vol.186 , pp. 335-342
    • Basu, A.1    Chatterjee, S.2    Das Gupta, S.K.3
  • 6
    • 79551613290 scopus 로고    scopus 로고
    • Toward the estimation of the absolute quality of individual protein structure models
    • Benkert P, Biasini M, Schwede T. 2011. Toward the estimation of the absolute quality of individual protein structure models. Bioinformatics 27:343-350.
    • (2011) Bioinformatics , vol.27 , pp. 343-350
    • Benkert, P.1    Biasini, M.2    Schwede, T.3
  • 7
    • 0024571640 scopus 로고
    • The helix-turn-helix DNA binding motif
    • Brennan RG, Matthews BW. 1989. The helix-turn-helix DNA binding motif. J. Biol. Chem. 264:1903-1906.
    • (1989) J. Biol. Chem. , vol.264 , pp. 1903-1906
    • Brennan, R.G.1    Matthews, B.W.2
  • 8
    • 0028826669 scopus 로고
    • Trinucleotide models for DNA bending propensity: comparison of models based on DNaseI digestion and nucleosome packaging data
    • Brukner I, Sanchez R, Suck D, Pongor S. 1995. Trinucleotide models for DNA bending propensity: comparison of models based on DNaseI digestion and nucleosome packaging data. J. Biomol. Struct. Dyn. 13:309 -317.
    • (1995) J. Biomol. Struct. Dyn. , vol.13 , pp. 309-317
    • Brukner, I.1    Sanchez, R.2    Suck, D.3    Pongor, S.4
  • 9
    • 0036203066 scopus 로고    scopus 로고
    • Structure of the bacterial RNA polymerase promoter specificity sigma subunit
    • Campbell EA, et al. 2002. Structure of the bacterial RNA polymerase promoter specificity sigma subunit. Mol. Cell 9:527-539.
    • (2002) Mol. Cell , vol.9 , pp. 527-539
    • Campbell, E.A.1
  • 10
    • 0012837562 scopus 로고    scopus 로고
    • Crystal structure of Escherichia coli sigmaE with the cytoplasmic domain of its anti-sigma RseA
    • Campbell EA, et al. 2003. Crystal structure of Escherichia coli sigmaE with the cytoplasmic domain of its anti-sigma RseA. Mol. Cell 11:1067- 1078.
    • (2003) Mol. Cell , vol.11 , pp. 1067-1078
    • Campbell, E.A.1
  • 11
    • 0022653838 scopus 로고
    • Characterization of the ColE9-J plasmid and analysis of its genetic organization
    • Chak KF, James R. 1986. Characterization of the ColE9-J plasmid and analysis of its genetic organization. J. Gen. Microbiol. 132:61-70.
    • (1986) J. Gen. Microbiol. , vol.132 , pp. 61-70
    • Chak, K.F.1    James, R.2
  • 12
    • 36749055666 scopus 로고    scopus 로고
    • DNA bending in the mycobacterial plasmid pAL5000 origin-RepB complex
    • Chatterjee S, Basu A, Basu A, Das Gupta SK. 2007. DNA bending in the mycobacterial plasmid pAL5000 origin-RepB complex. J. Bacteriol. 189: 8584-8592.
    • (2007) J. Bacteriol. , vol.189 , pp. 8584-8592
    • Chatterjee, S.1    Basu, A.2    Basu, A.3    Das Gupta, S.K.4
  • 13
    • 0344699472 scopus 로고    scopus 로고
    • Transposition-induced structural instability of Escherichia coli-mycobacteria shuttle vectors
    • Chawla M, Das Gupta SK. 1999. Transposition-induced structural instability of Escherichia coli-mycobacteria shuttle vectors. Plasmid 41:135- 140.
    • (1999) Plasmid , vol.41 , pp. 135-140
    • Chawla, M.1    Das Gupta, S.K.2
  • 15
  • 16
    • 0030785510 scopus 로고    scopus 로고
    • Structural analysis of the 6 kb cryptic plasmid pFAJ2600 from Rhodococcus erythropolis NI86/21 and construction of Escherichia coli-Rhodococcus shuttle vectors
    • De Mot R, et al. 1997. Structural analysis of the 6 kb cryptic plasmid pFAJ2600 from Rhodococcus erythropolis NI86/21 and construction of Escherichia coli-Rhodococcus shuttle vectors. Microbiology 143(Pt 10): 3137-3147.
    • (1997) Microbiology , vol.143 , Issue.PART 10 , pp. 3137-3147
    • De Mot, R.1
  • 17
    • 84863271073 scopus 로고    scopus 로고
    • Geneious v5. 4. Biomatters Ltd, Auckland, New Zealand
    • Drummond AJ, et al. 2011. Geneious v5. 4. Biomatters Ltd, Auckland, New Zealand.
    • (2011)
    • Drummond, A.J.1
  • 19
    • 0035942258 scopus 로고    scopus 로고
    • Similarities between the DNA replication initiators of Gram-negative bacteria plasmids (RepA) and eukaryotes (Orc4p)/archaea (Cdc6p)
    • Giraldo R, Diaz-Orejas R. 2001. Similarities between the DNA replication initiators of Gram-negative bacteria plasmids (RepA) and eukaryotes (Orc4p)/archaea (Cdc6p). Proc. Natl. Acad. Sci. U. S. A. 98:4938-4943.
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 4938-4943
    • Giraldo, R.1    Diaz-Orejas, R.2
  • 20
    • 0028225644 scopus 로고
    • The crystal structure of C-C-A-T-T-A-A-T-G-G. Implications for bending of B-DNA at T-A steps
    • Goodsell DS, Kaczor-Grzeskowiak M, Dickerson RE. 1994. The crystal structure of C-C-A-T-T-A-A-T-G-G. Implications for bending of B-DNA at T-A steps. J. Mol. Biol. 239:79 -96.
    • (1994) J. Mol. Biol. , vol.239 , pp. 79-96
    • Goodsell, D.S.1    Kaczor-Grzeskowiak, M.2    Dickerson, R.E.3
  • 21
    • 0025310356 scopus 로고
    • DNA recognition by proteins with the helix-turn-helix motif
    • Harrison SC, Aggarwal AK. 1990. DNA recognition by proteins with the helix-turn-helix motif. Annu. Rev. Biochem. 59:933-969.
    • (1990) Annu. Rev. Biochem. , vol.59 , pp. 933-969
    • Harrison, S.C.1    Aggarwal, A.K.2
  • 22
    • 0028114780 scopus 로고
    • Comparative analysis of the replicon regions of eleven ColE2-related plasmids
    • Hiraga S, Sugiyama T, Itoh T. 1994. Comparative analysis of the replicon regions of eleven ColE2-related plasmids. J. Bacteriol. 176:7233-7243.
    • (1994) J. Bacteriol. , vol.176 , pp. 7233-7243
    • Hiraga, S.1    Sugiyama, T.2    Itoh, T.3
  • 23
    • 0035258448 scopus 로고    scopus 로고
    • Improvement of desulfurization activity in Rhodococcus erythropolis KA2-5-1 by genetic engineering
    • Hirasawa K, Ishii Y, Kobayashi M, Koizumi K, Maruhashi K. 2001. Improvement of desulfurization activity in Rhodococcus erythropolis KA2-5-1 by genetic engineering. Biosci. Biotechnol. Biochem. 65:239- 246.
    • (2001) Biosci. Biotechnol. Biochem. , vol.65 , pp. 239-246
    • Hirasawa, K.1    Ishii, Y.2    Kobayashi, M.3    Koizumi, K.4    Maruhashi, K.5
  • 24
    • 22444435033 scopus 로고    scopus 로고
    • Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new members
    • Iyer LM, Koonin EV, Leipe DD, Aravind L. 2005. Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new members. Nucleic Acids Res. 33: 3875-3896.
    • (2005) Nucleic Acids Res , vol.33 , pp. 3875-3896
    • Iyer, L.M.1    Koonin, E.V.2    Leipe, D.D.3    Aravind, L.4
  • 25
    • 0033578684 scopus 로고    scopus 로고
    • Protein secondary structure prediction based on position-specific scoring matrices
    • Jones DT. 1999. Protein secondary structure prediction based on position-specific scoring matrices. J. Mol. Biol. 292:195-202.
    • (1999) J. Mol. Biol. , vol.292 , pp. 195-202
    • Jones, D.T.1
  • 26
    • 0033765883 scopus 로고    scopus 로고
    • Characterization of pRGO1, a plasmid from Propionibacterium acidipropionici, and its use for development of a hostvector system in propionibacteria
    • Kiatpapan P, et al. 2000. Characterization of pRGO1, a plasmid from Propionibacterium acidipropionici, and its use for development of a hostvector system in propionibacteria. Appl. Environ. Microbiol. 66:4688- 4695.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4688-4695
    • Kiatpapan, P.1
  • 27
    • 0024814234 scopus 로고
    • Bending of DNA by generegulatory proteins: construction and use of a DNA bending vector
    • Kim J, Zwieb C, Wu C, Adhya S. 1989. Bending of DNA by generegulatory proteins: construction and use of a DNA bending vector. Gene 85:15-23.
    • (1989) Gene , vol.85 , pp. 15-23
    • Kim, J.1    Zwieb, C.2    Wu, C.3    Adhya, S.4
  • 28
    • 0022477409 scopus 로고
    • DNA bending at adenine · thymine tracts
    • Koo HS, Wu HM, Crothers DM. 1986. DNA bending at adenine · thymine tracts. Nature 320:501-506.
    • (1986) Nature , vol.320 , pp. 501-506
    • Koo, H.S.1    Wu, H.M.2    Crothers, D.M.3
  • 29
    • 0022257459 scopus 로고
    • Cryptic plasmid of Neisseria gonorrhoeae: complete nucleotide sequence and genetic organization
    • Korch C, Hagblom P, Ohman H, Goransson M, Normark S. 1985. Cryptic plasmid of Neisseria gonorrhoeae: complete nucleotide sequence and genetic organization. J. Bacteriol. 163:430-438.
    • (1985) J. Bacteriol. , vol.163 , pp. 430-438
    • Korch, C.1    Hagblom, P.2    Ohman, H.3    Goransson, M.4    Normark, S.5
  • 30
    • 33748625150 scopus 로고    scopus 로고
    • The structural basis for promoter -35 element recognition by the group IV sigma factors
    • Lane WJ, Darst SA. 2006. The structural basis for promoter -35 element recognition by the group IV sigma factors. PLoS Biol. 4:e269.
    • (2006) PLoS Biol , vol.4
    • Lane, W.J.1    Darst, S.A.2
  • 31
    • 2942612200 scopus 로고    scopus 로고
    • pB264, a small, mobilizable, temperature sensitive plasmid from Rhodococcus
    • Lessard PA, O'Brien XM, Currie DH, Sinskey AJ. 2004. pB264, a small, mobilizable, temperature sensitive plasmid from Rhodococcus. BMC Microbiol. 4:15.
    • (2004) BMC Microbiol , vol.4 , pp. 15
    • Lessard, P.A.1    O'Brien, X.M.2    Currie, D.H.3    Sinskey, A.J.4
  • 32
    • 2342447166 scopus 로고    scopus 로고
    • A mutant spacer sequence between-35 and-10 elements makes the Plac promoter hyperactive and cAMP receptor protein-independent
    • Liu M, Tolstorukov M, Zhurkin V, Garges S, Adhya S. 2004. A mutant spacer sequence between-35 and-10 elements makes the Plac promoter hyperactive and cAMP receptor protein-independent. Proc. Natl. Acad. Sci. U. S. A. 101:6911- 6916.
    • (2004) Proc. Natl. Acad. Sci. U. S. A. , vol.101 , pp. 6911-6916
    • Liu, M.1    Tolstorukov, M.2    Zhurkin, V.3    Garges, S.4    Adhya, S.5
  • 33
    • 1142274346 scopus 로고    scopus 로고
    • Sigma factors and global gene regulation in Mycobacterium tuberculosis
    • Manganelli R, et al. 2004. Sigma factors and global gene regulation in Mycobacterium tuberculosis. J. Bacteriol. 186:895-902.
    • (2004) J. Bacteriol. , vol.186 , pp. 895-902
    • Manganelli, R.1
  • 34
    • 33846563851 scopus 로고    scopus 로고
    • Analysis of the 7.6-kb cryptic plasmid pNC500 from Rhodococcus rhodochrous B-276 and construction of Rhodococcus-E. coli shuttle vector
    • Matsui T, Saeki H, Shinzato N, Matsuda H. 2007. Analysis of the 7.6-kb cryptic plasmid pNC500 from Rhodococcus rhodochrous B-276 and construction of Rhodococcus-E. coli shuttle vector. Appl. Microbiol. Biotechnol. 74:169 -175.
    • (2007) Appl. Microbiol. Biotechnol. , vol.74 , pp. 169-175
    • Matsui, T.1    Saeki, H.2    Shinzato, N.3    Matsuda, H.4
  • 35
    • 33744807735 scopus 로고    scopus 로고
    • Characterization of Rhodococcus-E. coli shuttle vector pNC9501 constructed from the cryptic plasmid of a propene-degrading bacterium
    • Matsui T, Saeki H, Shinzato N, Matsuda H. 2006. Characterization of Rhodococcus-E. coli shuttle vector pNC9501 constructed from the cryptic plasmid of a propene-degrading bacterium. Curr. Microbiol. 52:445- 448.
    • (2006) Curr. Microbiol. , vol.52 , pp. 445-448
    • Matsui, T.1    Saeki, H.2    Shinzato, N.3    Matsuda, H.4
  • 36
    • 67649312012 scopus 로고    scopus 로고
    • Isolation and characterization of a theta-type cryptic plasmid from Bifidobacterium longum FI10564
    • Moon GS, Wegmann U, Gunning AP, Gasson MJ, Narbad A. 2009. Isolation and characterization of a theta-type cryptic plasmid from Bifidobacterium longum FI10564. J. Microbiol. Biotechnol. 19:403- 408.
    • (2009) J. Microbiol. Biotechnol. , vol.19 , pp. 403-408
    • Moon, G.S.1    Wegmann, U.2    Gunning, A.P.3    Gasson, M.J.4    Narbad, A.5
  • 37
    • 0037368534 scopus 로고    scopus 로고
    • Complete nucleotide sequence of a native plasmid from Brevibacterium linens
    • Moore M, Svenson C, Bowling D, Glenn D. 2003. Complete nucleotide sequence of a native plasmid from Brevibacterium linens. Plasmid 49: 160-168.
    • (2003) Plasmid , vol.49 , pp. 160-168
    • Moore, M.1    Svenson, C.2    Bowling, D.3    Glenn, D.4
  • 40
    • 0037261948 scopus 로고    scopus 로고
    • The sigma70 family of sigma factors
    • Paget MS, Helmann JD. 2003. The sigma70 family of sigma factors. Genome Biol. 4:203.
    • (2003) Genome Biol , vol.4 , pp. 203
    • Paget, M.S.1    Helmann, J.D.2
  • 41
    • 0028298256 scopus 로고
    • Promoters responsive to DNA bending: a common theme in prokaryotic gene expression
    • Perez-Martin J, Rojo F, de Lorenzo V. 1994. Promoters responsive to DNA bending: a common theme in prokaryotic gene expression. Microbiol. Rev. 58:268 -290.
    • (1994) Microbiol. Rev. , vol.58 , pp. 268-290
    • Perez-Martin, J.1    Rojo, F.2    de Lorenzo, V.3
  • 42
    • 0042233986 scopus 로고    scopus 로고
    • Regulated recruitment and cooperativity in the design of biological regulatory systems
    • Ptashne M. 2003. Regulated recruitment and cooperativity in the design of biological regulatory systems. Philos. Transact. A Math. Phys. Eng. Sci. 361:1223-1234.
    • (2003) Philos. Transact. A Math. Phys. Eng. Sci. , vol.361 , pp. 1223-1234
    • Ptashne, M.1
  • 43
    • 33845382268 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis SigM positively regulates Esx secreted protein and nonribosomal peptide synthetase genes and down regulates virulence-associated surface lipid synthesis
    • Raman S, et al. 2006. Mycobacterium tuberculosis SigM positively regulates Esx secreted protein and nonribosomal peptide synthetase genes and down regulates virulence-associated surface lipid synthesis. J. Bacteriol. 188:8460-8468.
    • (2006) J. Bacteriol. , vol.188 , pp. 8460-8468
    • Raman, S.1
  • 44
    • 0024234580 scopus 로고
    • Complete nucleotide sequence of pAL5000, a plasmid from Mycobacterium fortuitum
    • Rauzier J, Moniz-Pereira J, Gicquel-Sanzey B. 1988. Complete nucleotide sequence of pAL5000, a plasmid from Mycobacterium fortuitum. Gene 71:315-321.
    • (1988) Gene , vol.71 , pp. 315-321
    • Rauzier, J.1    Moniz-Pereira, J.2    Gicquel-Sanzey, B.3
  • 45
    • 1842509904 scopus 로고    scopus 로고
    • DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding
    • Remus D, Beall EL, Botchan MR. 2004. DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding. EMBO J. 23:897-907.
    • (2004) EMBO J , vol.23 , pp. 897-907
    • Remus, D.1    Beall, E.L.2    Botchan, M.R.3
  • 46
    • 0029923078 scopus 로고    scopus 로고
    • Characterization of the plasmid pMB1 from Bifidobacterium longum and its use for shuttle vector construction
    • Rossi M, Brigidi P, Gonzalez Vara y Rodriguez A, Matteuzzi D. 1996. Characterization of the plasmid pMB1 from Bifidobacterium longum and its use for shuttle vector construction. Res. Microbiol. 147:133-143.
    • (1996) Res. Microbiol. , vol.147 , pp. 133-143
    • Rossi, M.1    Brigidi, P.2    Gonzalez Vara y Rodriguez, A.3    Matteuzzi, D.4
  • 47
    • 75149113154 scopus 로고    scopus 로고
    • The sigma factors of Mycobacterium tuberculosis: regulation of the regulators
    • Sachdeva P, Misra R, Tyagi AK, Singh Y. 2010. The sigma factors of Mycobacterium tuberculosis: regulation of the regulators. FEBS J. 277:605-626.
    • (2010) FEBS J , vol.277 , pp. 605-626
    • Sachdeva, P.1    Misra, R.2    Tyagi, A.K.3    Singh, Y.4
  • 48
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 49
    • 33644854755 scopus 로고    scopus 로고
    • Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4
    • Sekine M, et al. 2006. Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4. Environ. Microbiol. 8:334 -346.
    • (2006) Environ. Microbiol. , vol.8 , pp. 334-346
    • Sekine, M.1
  • 50
    • 0036479225 scopus 로고    scopus 로고
    • The helix-turn-helix motif of the coliphage 186 immunity repressor binds to two distinct recognition sequences
    • Shearwin KE, Dodd IB, Egan JB. 2002. The helix-turn-helix motif of the coliphage 186 immunity repressor binds to two distinct recognition sequences. J. Biol. Chem. 277:3186 -3194.
    • (2002) J. Biol. Chem. , vol.277 , pp. 3186-3194
    • Shearwin, K.E.1    Dodd, I.B.2    Egan, J.B.3
  • 51
    • 0141815541 scopus 로고    scopus 로고
    • Analysis of singleton ORFans in fully sequenced microbial genomes
    • Siew N, Fischer D. 2003. Analysis of singleton ORFans in fully sequenced microbial genomes. Proteins 53:241-251.
    • (2003) Proteins , vol.53 , pp. 241-251
    • Siew, N.1    Fischer, D.2
  • 52
    • 0030925920 scopus 로고    scopus 로고
    • Pfam: a comprehensive database of protein domain families based on seed alignments
    • Sonnhammer EL, Eddy SR, Durbin R. 1997. Pfam: a comprehensive database of protein domain families based on seed alignments. Proteins 28:405- 420.
    • (1997) Proteins , vol.28 , pp. 405-420
    • Sonnhammer, E.L.1    Eddy, S.R.2    Durbin, R.3
  • 53
    • 70350432754 scopus 로고    scopus 로고
    • The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family
    • Staron A, et al. 2009. The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) sigma factor protein family. Mol. Microbiol. 74:557-581.
    • (2009) Mol. Microbiol. , vol.74 , pp. 557-581
    • Staron, A.1
  • 54
    • 0030987537 scopus 로고    scopus 로고
    • Mutational analysis of the regulatory region of the Mycobacterium plasmid pAL5000
    • Stolt P, Stoker NG. 1997. Mutational analysis of the regulatory region of the Mycobacterium plasmid pAL5000. Nucleic Acids Res. 25:3840 -3846.
    • (1997) Nucleic Acids Res , vol.25 , pp. 3840-3846
    • Stolt, P.1    Stoker, N.G.2
  • 55
    • 0029811306 scopus 로고    scopus 로고
    • Protein-DNA interactions in the ori region of the Mycobacterium fortuitum plasmid pAL5000
    • Stolt P, Stoker NG. 1996. Protein-DNA interactions in the ori region of the Mycobacterium fortuitum plasmid pAL5000. J. Bacteriol. 178:6693- 6700.
    • (1996) J. Bacteriol. , vol.178 , pp. 6693-6700
    • Stolt, P.1    Stoker, N.G.2
  • 56
    • 0026279733 scopus 로고
    • Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system
    • Studier FW. 1991. Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system. J. Mol. Biol. 219:37- 44.
    • (1991) J. Mol. Biol. , vol.219 , pp. 37-44
    • Studier, F.W.1
  • 57
    • 1942455731 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis ECF sigma factor sigC is required for lethality in mice and for the conditional expression of a defined gene set
    • Sun R, et al. 2004. Mycobacterium tuberculosis ECF sigma factor sigC is required for lethality in mice and for the conditional expression of a defined gene set. Mol. Microbiol. 52:25-38.
    • (2004) Mol. Microbiol. , vol.52 , pp. 25-38
    • Sun, R.1
  • 58
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596 -1599.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 59
    • 33947506850 scopus 로고    scopus 로고
    • Structural and biophysical studies on two promoter recognition domains of the extra-cytoplasmic function sigma factor sigma(C) from Mycobacterium tuberculosis
    • Thakur KG, Joshi AM, Gopal B. 2007. Structural and biophysical studies on two promoter recognition domains of the extra-cytoplasmic function sigma factor sigma(C) from Mycobacterium tuberculosis. J. Biol. Chem. 282:4711- 4718.
    • (2007) J. Biol. Chem. , vol.282 , pp. 4711-4718
    • Thakur, K.G.1    Joshi, A.M.2    Gopal, B.3
  • 60
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673- 4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 61
    • 0031221393 scopus 로고    scopus 로고
    • DNA recognition and nucleosome organization
    • Travers A, Drew H. 1997. DNA recognition and nucleosome organization. Biopolymers 44:423- 433.
    • (1997) Biopolymers , vol.44 , pp. 423-433
    • Travers, A.1    Drew, H.2
  • 63
    • 34548746905 scopus 로고    scopus 로고
    • Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum
    • Ventura M, et al. 2007. Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum. Microbiol. Mol. Biol. Rev. 71:495- 548.
    • (2007) Microbiol. Mol. Biol. Rev. , vol.71 , pp. 495-548
    • Ventura, M.1
  • 64
    • 0042121115 scopus 로고    scopus 로고
    • DNA analysis servers: plot.it, bend.it, model.it and IS
    • Vlahovicek K, Kajan L, Pongor S. 2003. DNA analysis servers: plot.it, bend.it, model.it and IS. Nucleic Acids Res. 31:3686 -3687.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3686-3687
    • Vlahovicek, K.1    Kajan, L.2    Pongor, S.3
  • 66
    • 80052782406 scopus 로고    scopus 로고
    • A new basal promoter element recognized by RNA polymerase core enzyme
    • Yuzenkova Y, Tadigotla VR, Severinov K, Zenkin N. 2011. A new basal promoter element recognized by RNA polymerase core enzyme. EMBO J. 30:3766 -3775.
    • (2011) EMBO J , vol.30 , pp. 3766-3775
    • Yuzenkova, Y.1    Tadigotla, V.R.2    Severinov, K.3    Zenkin, N.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.