-
1
-
-
0025893357
-
Genetic and immunological analysis of Mycobacterium tuberculosis fibronectin-binding proteins
-
Abou-Zeid, C., T. Garbe, R. Lathigra, H. G. Wiker, M. Harboe, G. A. Rook, and D. B. Young. 1991. Genetic and immunological analysis of Mycobacterium tuberculosis fibronectin-binding proteins. Infect. Immun. 59:2712-2718.
-
(1991)
Infect. Immun
, vol.59
, pp. 2712-2718
-
-
Abou-Zeid, C.1
Garbe, T.2
Lathigra, R.3
Wiker, H.G.4
Harboe, M.5
Rook, G.A.6
Young, D.B.7
-
2
-
-
19344372271
-
Systems biology: Its practice and challenges
-
Aderem, A. 2005. Systems biology: its practice and challenges. Cell 121:511-513.
-
(2005)
Cell
, vol.121
, pp. 511-513
-
-
Aderem, A.1
-
3
-
-
0037340615
-
Sequence analysis corresponding to the PPE and PE proteins in Mycobacterium tuberculosis and other genomes
-
Adindla, S., and L. Guruprasad. 2003. Sequence analysis corresponding to the PPE and PE proteins in Mycobacterium tuberculosis and other genomes. J. Biosci. 28:169-179.
-
(2003)
J. Biosci
, vol.28
, pp. 169-179
-
-
Adindla, S.1
Guruprasad, L.2
-
4
-
-
33846942978
-
Molecular function of WhiB4/Rv3681c of Mycobacterium tuberculosis H37Rv: A [4Fe-4S] cluster co-ordinating protein disulphide reductase
-
Alam, M. S., S. K. Garg, and P. Agrawal. 2007. Molecular function of WhiB4/Rv3681c of Mycobacterium tuberculosis H37Rv: a [4Fe-4S] cluster co-ordinating protein disulphide reductase. Mol. Microbiol. 63:1414-1431.
-
(2007)
Mol. Microbiol
, vol.63
, pp. 1414-1431
-
-
Alam, M.S.1
Garg, S.K.2
Agrawal, P.3
-
5
-
-
33847229761
-
Screening for plasmids among human bifidobacteria species: Sequencing and analysis of pBC1 from Bifidobacterium catenulatum L48
-
Alvarez-Martin, P., A. B. Florez, and B. Mayo. 2006. Screening for plasmids among human bifidobacteria species: sequencing and analysis of pBC1 from Bifidobacterium catenulatum L48. Plasmid 57:165-174.
-
(2006)
Plasmid
, vol.57
, pp. 165-174
-
-
Alvarez-Martin, P.1
Florez, A.B.2
Mayo, B.3
-
6
-
-
4344700243
-
Multilocus short sequence repeat sequencing approach for differentiating among Mycobacterium avium subsp. paratuberculosis strains
-
Amonsin, A., L. L. Li, Q. Zhang, J. P. Bannantine, A. S. Motiwala, S. Sreevatsan, and V. Kapur. 2004. Multilocus short sequence repeat sequencing approach for differentiating among Mycobacterium avium subsp. paratuberculosis strains. J. Clin. Microbiol. 42:1694-1702.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 1694-1702
-
-
Amonsin, A.1
Li, L.L.2
Zhang, Q.3
Bannantine, J.P.4
Motiwala, A.S.5
Sreevatsan, S.6
Kapur, V.7
-
7
-
-
0035029472
-
-
Andersson, J. O., and S. G. Andersson. 2001. Pseudogenes, junk DNA, and the dynamics of Rickettsia genomes. Mol. Biol Evol. 18:829-839.
-
Andersson, J. O., and S. G. Andersson. 2001. Pseudogenes, junk DNA, and the dynamics of Rickettsia genomes. Mol. Biol Evol. 18:829-839.
-
-
-
-
8
-
-
0033771684
-
The genomics gamble
-
Andersson, S. G. 2000. The genomics gamble. Nat. Genet. 26:134-135.
-
(2000)
Nat. Genet
, vol.26
, pp. 134-135
-
-
Andersson, S.G.1
-
9
-
-
0032512051
-
The genome sequence of Rickettsia prowazekii and the origin of mitochondria
-
Andersson, S. G., A. Zomorodipour, J. O. Andersson, T. Sicheritz-Ponten, U. C. Alsmark, R. M. Podowski, A. K. Naslund, A. S. Eriksson, H. H. Winkler, and C. G. Kurland. 1998. The genome sequence of Rickettsia prowazekii and the origin of mitochondria. Nature 396:133-140.
-
(1998)
Nature
, vol.396
, pp. 133-140
-
-
Andersson, S.G.1
Zomorodipour, A.2
Andersson, J.O.3
Sicheritz-Ponten, T.4
Alsmark, U.C.5
Podowski, R.M.6
Naslund, A.K.7
Eriksson, A.S.8
Winkler, H.H.9
Kurland, C.G.10
-
10
-
-
0021150966
-
Morphological and molecular characterization of several actinophages isolated from soil which lyse Streptomyces cattleya or S. venezuelae
-
Anne, J., W. Wohlleben, H. J. Burkardt, R. Springer, and A. Puhler. 1984. Morphological and molecular characterization of several actinophages isolated from soil which lyse Streptomyces cattleya or S. venezuelae. J. Gen. Microbiol. 130:2639-2649.
-
(1984)
J. Gen. Microbiol
, vol.130
, pp. 2639-2649
-
-
Anne, J.1
Wohlleben, W.2
Burkardt, H.J.3
Springer, R.4
Puhler, A.5
-
11
-
-
0031767825
-
CYP51-like gene of Mycobacterium tuberculosis actually encodes a P450 similar to eukaryotic CYP51
-
Aoyama, Y., T. Horiuchi, O. Gotoh, M. Noshiro, and Y. Yoshida. 1998. CYP51-like gene of Mycobacterium tuberculosis actually encodes a P450 similar to eukaryotic CYP51. J. Biochem. (Tokyo) 124:694-696.
-
(1998)
J. Biochem. (Tokyo)
, vol.124
, pp. 694-696
-
-
Aoyama, Y.1
Horiuchi, T.2
Gotoh, O.3
Noshiro, M.4
Yoshida, Y.5
-
12
-
-
0030818333
-
Genetics of eubacterial carotenoid biosynthesis: A colorful tale
-
Armstrong, G. A. 1997. Genetics of eubacterial carotenoid biosynthesis: a colorful tale. Annu. Rev. Microbiol. 51:629-659.
-
(1997)
Annu. Rev. Microbiol
, vol.51
, pp. 629-659
-
-
Armstrong, G.A.1
-
13
-
-
0027424110
-
Cloning of an M. tuberculosis DNA fragment associated with entry and survival inside cells
-
Arruda, S., G. Bomfim, R. Knights, T. Huima-Byron, and L. W. Riley. 1993. Cloning of an M. tuberculosis DNA fragment associated with entry and survival inside cells. Science 261:1454-1457.
-
(1993)
Science
, vol.261
, pp. 1454-1457
-
-
Arruda, S.1
Bomfim, G.2
Knights, R.3
Huima-Byron, T.4
Riley, L.W.5
-
14
-
-
0037458529
-
Eradication of Propionibacterium acnes by its endogenic porphyrins after illumination with high intensity blue light
-
Ashkenazi, H., Z. Malik, Y. Harth, and Y. Nitzan. 2003. Eradication of Propionibacterium acnes by its endogenic porphyrins after illumination with high intensity blue light. FEMS Immunol. Med. Microbiol. 35:17-24.
-
(2003)
FEMS Immunol. Med. Microbiol
, vol.35
, pp. 17-24
-
-
Ashkenazi, H.1
Malik, Z.2
Harth, Y.3
Nitzan, Y.4
-
15
-
-
34548797803
-
-
Atlas, R. 1997. Principles of microbiology. WCB McGrill-Hill, New York, NY.
-
Atlas, R. 1997. Principles of microbiology. WCB McGrill-Hill, New York, NY.
-
-
-
-
16
-
-
15544369658
-
Host-bacterial mutualism in the human intestine
-
Backhed, F., R. E. Ley, J. L. Sonnenburg, D. A. Peterson, and J. I. Gordon. 2005. Host-bacterial mutualism in the human intestine. Science 307:1915-1920.
-
(2005)
Science
, vol.307
, pp. 1915-1920
-
-
Backhed, F.1
Ley, R.E.2
Sonnenburg, J.L.3
Peterson, D.A.4
Gordon, J.I.5
-
17
-
-
0345832053
-
Expression and immunogenicity of proteins encoded by sequences specific to Mycobacterium avium subsp. paratuberculosis
-
Bannantine, J. P., J. K. Hansen, M. L. Paustian, A. Amonsin, L. L. Li, J. R. Stabel, and V. Kapur. 2004. Expression and immunogenicity of proteins encoded by sequences specific to Mycobacterium avium subsp. paratuberculosis. J. Clin. Microbiol. 42:106-114.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 106-114
-
-
Bannantine, J.P.1
Hansen, J.K.2
Paustian, M.L.3
Amonsin, A.4
Li, L.L.5
Stabel, J.R.6
Kapur, V.7
-
18
-
-
0014901426
-
Corynebacterium diphtheriae and its relatives
-
Barksdale, L. 1970. Corynebacterium diphtheriae and its relatives. Bacteriol. Rev. 34:378-422.
-
(1970)
Bacteriol. Rev
, vol.34
, pp. 378-422
-
-
Barksdale, L.1
-
19
-
-
34047118522
-
CRISPR provides acquired resistance against viruses in prokaryotes
-
Barrangou, R., C. Fremaux, H. Deveau, M. Richards, P. Boyaval, S. Moineau, D. A. Romero, and P. Horvath. 2007. CRISPR provides acquired resistance against viruses in prokaryotes. Science 315:1709-1712.
-
(2007)
Science
, vol.315
, pp. 1709-1712
-
-
Barrangou, R.1
Fremaux, C.2
Deveau, H.3
Richards, M.4
Boyaval, P.5
Moineau, S.6
Romero, D.A.7
Horvath, P.8
-
20
-
-
13244282994
-
Heat shock proteome analysis of wild-type Corynebacterium glutamicum ATCC 13032 and a spontaneous mutant lacking GroEL1, a dispensable chaperone
-
Barreiro, C., E. Gonzalez-Lavado, S. Brand, A. Tauch, and J. F. Martin. 2005. Heat shock proteome analysis of wild-type Corynebacterium glutamicum ATCC 13032 and a spontaneous mutant lacking GroEL1, a dispensable chaperone. J. Bacteriol. 187:884-889.
-
(2005)
J. Bacteriol
, vol.187
, pp. 884-889
-
-
Barreiro, C.1
Gonzalez-Lavado, E.2
Brand, S.3
Tauch, A.4
Martin, J.F.5
-
21
-
-
0029328503
-
Plant carotenoids: Pigments for photoprotection, visual attraction, and human health
-
Bartley, G. E., and P. A. Scolnik. 1995. Plant carotenoids: pigments for photoprotection, visual attraction, and human health. Plant Cell 7:1027-1038.
-
(1995)
Plant Cell
, vol.7
, pp. 1027-1038
-
-
Bartley, G.E.1
Scolnik, P.A.2
-
22
-
-
34547726221
-
Contribution of horizontally acquired genomic islands to the evolution of the tubercle bacilli
-
in press
-
Becq, J., M. C. Gutierrez, V. Rosas-Magallanes, J. Rauzier, B. Gicquel, O. Neyrolles, and P. Deschavanne. Contribution of horizontally acquired genomic islands to the evolution of the tubercle bacilli. Mol. Biol. Evol., in press.
-
Mol. Biol. Evol
-
-
Becq, J.1
Gutierrez, M.C.2
Rosas-Magallanes, V.3
Rauzier, J.4
Gicquel, B.5
Neyrolles, O.6
Deschavanne, P.7
-
23
-
-
0029126255
-
Isolation and sequencing of the replication region of Mycobacterium avium plasmid pLR7
-
Beggs, M. L., J. T. Crawford, and K. D. Eisenach. 1995. Isolation and sequencing of the replication region of Mycobacterium avium plasmid pLR7. J. Bacteriol. 177:4836-4840.
-
(1995)
J. Bacteriol
, vol.177
, pp. 4836-4840
-
-
Beggs, M.L.1
Crawford, J.T.2
Eisenach, K.D.3
-
24
-
-
0033612136
-
Comparative genomics of BCG vaccines by whole-genome DNA microarray
-
Behr, M. A., M. A. Wilson, W. P. Gill, H. Salamon, G. K. Schoolnik, S. Rane, and P. M. Small. 1999. Comparative genomics of BCG vaccines by whole-genome DNA microarray. Science 284:1520-1523.
-
(1999)
Science
, vol.284
, pp. 1520-1523
-
-
Behr, M.A.1
Wilson, M.A.2
Gill, W.P.3
Salamon, H.4
Schoolnik, G.K.5
Rane, S.6
Small, P.M.7
-
25
-
-
12144290502
-
SCP1, a 356,023 bp linear plasmid adapted to the ecology and developmental biology of its host, Streptomyces coelicolor A3(2)
-
Bentley, S. D., S. Brown, L. D. Murphy, D. E. Harris, M. A. Quail, J. Parkhill, B. G. Barrell, J. R. McCormick, R. I. Santamaria, R. Losick, M. Yamasaki, H. Kinashi, C. W. Chen, G. Chandra, D. Jakimowicz, H. M. Kieser, T. Kieser, and K. F. Chater. 2004. SCP1, a 356,023 bp linear plasmid adapted to the ecology and developmental biology of its host, Streptomyces coelicolor A3(2). Mol. Microbiol. 51:1615-1628.
-
(2004)
Mol. Microbiol
, vol.51
, pp. 1615-1628
-
-
Bentley, S.D.1
Brown, S.2
Murphy, L.D.3
Harris, D.E.4
Quail, M.A.5
Parkhill, J.6
Barrell, B.G.7
McCormick, J.R.8
Santamaria, R.I.9
Losick, R.10
Yamasaki, M.11
Kinashi, H.12
Chen, C.W.13
Chandra, G.14
Jakimowicz, D.15
Kieser, H.M.16
Kieser, T.17
Chater, K.F.18
-
26
-
-
0037046560
-
-
Bentley, S. D., K. F. Chater, A. M. Cerdeno-Tarraga, G. L. Challis, N. R. Thomson, K. D. James, D. E. Harris, M. A. Quail, H. Kieser, D. Harper, A. Bateman, S. Brown, G. Chandra, C. W. Chen, M. Collins, A. Cronin, A. Fraser, A. Goble, J. Hidalgo, T. Hornsby, S. Howarth, C. H. Huang, T. Kieser, L. Larke, L. Murphy, K. Oliver, S. O'Neil, E. Rabbinowitsch, M. A. Rajandream, K. Rutherford, S. Rutter, K. Seeger, D. Saunders, S. Sharp, R. Squares, S. Squares, K. Taylor, T. Warren, A. Wietzorrek, J. Woodward, B. G. Barrell, J. Parkhill, and D. A. Hopwood. 2002. Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature 417:141-147.
-
Bentley, S. D., K. F. Chater, A. M. Cerdeno-Tarraga, G. L. Challis, N. R. Thomson, K. D. James, D. E. Harris, M. A. Quail, H. Kieser, D. Harper, A. Bateman, S. Brown, G. Chandra, C. W. Chen, M. Collins, A. Cronin, A. Fraser, A. Goble, J. Hidalgo, T. Hornsby, S. Howarth, C. H. Huang, T. Kieser, L. Larke, L. Murphy, K. Oliver, S. O'Neil, E. Rabbinowitsch, M. A. Rajandream, K. Rutherford, S. Rutter, K. Seeger, D. Saunders, S. Sharp, R. Squares, S. Squares, K. Taylor, T. Warren, A. Wietzorrek, J. Woodward, B. G. Barrell, J. Parkhill, and D. A. Hopwood. 2002. Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature 417:141-147.
-
-
-
-
27
-
-
0037460735
-
Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei
-
Bentley, S. D., M. Maiwald, L. D. Murphy, M. J. Pallen, C. A. Yeats, L. G. Dover, H. T. Norbertczak, G. S. Besra, M. A. Quail, D. E. Harris, A. von Herbay, A. Goble, S. Rutter, R. Squares, S. Squares, B. G. Barrell, J. Parkhill, and D. A. Relman. 2003. Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei. Lancet 361:637-644.
-
(2003)
Lancet
, vol.361
, pp. 637-644
-
-
Bentley, S.D.1
Maiwald, M.2
Murphy, L.D.3
Pallen, M.J.4
Yeats, C.A.5
Dover, L.G.6
Norbertczak, H.T.7
Besra, G.S.8
Quail, M.A.9
Harris, D.E.10
von Herbay, A.11
Goble, A.12
Rutter, S.13
Squares, R.14
Squares, S.15
Barrell, B.G.16
Parkhill, J.17
Relman, D.A.18
-
28
-
-
10944235924
-
Comparative genomic structure of prokaryotes
-
Bentley, S. D., and J. Parkhill. 2004. Comparative genomic structure of prokaryotes. Annu. Rev. Genet. 38:771-792.
-
(2004)
Annu. Rev. Genet
, vol.38
, pp. 771-792
-
-
Bentley, S.D.1
Parkhill, J.2
-
29
-
-
14544294545
-
Bioactive microbial metabolites
-
Berdy, J. 2005. Bioactive microbial metabolites. J. Antibiot. (Tokyo) 58:1-26.
-
(2005)
J. Antibiot. (Tokyo)
, vol.58
, pp. 1-26
-
-
Berdy, J.1
-
30
-
-
0029835350
-
The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "house-cleaning" enzymes
-
Bessman, M. J., D. N. Frick, and S. F. O'Handley. 1996. The MutT proteins or "Nudix" hydrolases, a family of versatile, widely distributed, "house-cleaning" enzymes. J. Biol. Chem. 271:25059-25062.
-
(1996)
J. Biol. Chem
, vol.271
, pp. 25059-25062
-
-
Bessman, M.J.1
Frick, D.N.2
O'Handley, S.F.3
-
31
-
-
0027324744
-
Biology of DNA restriction
-
Bickle, T. A., and D. H. Kruger. 1993. Biology of DNA restriction. Microbiol. Rev. 57:434-450.
-
(1993)
Microbiol. Rev
, vol.57
, pp. 434-450
-
-
Bickle, T.A.1
Kruger, D.H.2
-
32
-
-
0033883789
-
Evaluation of recA sequences for identification of Mycobacterium species
-
Blackwood, K. S., C. He, J. Gunton, C. Y. Turenne, J. Wolfe, and A. M. Kabani. 2000. Evaluation of recA sequences for identification of Mycobacterium species. J. Clin. Microbiol. 38:2846-2852.
-
(2000)
J. Clin. Microbiol
, vol.38
, pp. 2846-2852
-
-
Blackwood, K.S.1
He, C.2
Gunton, J.3
Turenne, C.Y.4
Wolfe, J.5
Kabani, A.M.6
-
33
-
-
19944414611
-
Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus
-
Bolotin, A., B. Quinquis, P. Renault, A. Sorokin, S. D. Ehrlich, S. Kulakauskas, A. Lapidus, E. Goltsman, M. Mazur, G. D. Pusch, M. Fonstein, R. Overbeek, N. Kyprides, B. Purnelle, D. Prozzi, K. Ngui, D. Masuy, F. Hancy, S. Burteau, M. Boutry, J. Delcour, A. Goffeau, and P. Hols. 2004. Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus. Nat. Biotechnol. 22:1554-1558.
-
(2004)
Nat. Biotechnol
, vol.22
, pp. 1554-1558
-
-
Bolotin, A.1
Quinquis, B.2
Renault, P.3
Sorokin, A.4
Ehrlich, S.D.5
Kulakauskas, S.6
Lapidus, A.7
Goltsman, E.8
Mazur, M.9
Pusch, G.D.10
Fonstein, M.11
Overbeek, R.12
Kyprides, N.13
Purnelle, B.14
Prozzi, D.15
Ngui, K.16
Masuy, D.17
Hancy, F.18
Burteau, S.19
Boutry, M.20
Delcour, J.21
Goffeau, A.22
Hols, P.23
more..
-
34
-
-
19344362896
-
Towards cellular systems in 4D
-
Bork, P., and L. Serrano. 2005. Towards cellular systems in 4D. Cell 121:507-509.
-
(2005)
Cell
, vol.121
, pp. 507-509
-
-
Bork, P.1
Serrano, L.2
-
35
-
-
0019231684
-
A theory of modular evolution for bacteriophages
-
Botstein, D. 1980. A theory of modular evolution for bacteriophages. Ann. N. Y. Acad. Sci. 354:484-490.
-
(1980)
Ann. N. Y. Acad. Sci
, vol.354
, pp. 484-490
-
-
Botstein, D.1
-
36
-
-
16544392539
-
The capacity of nondigestible carbohydrates to stimulate fecal bifidobacteria in healthy humans: A double-blind, randomized, placebo-controlled, parallel-group, dose-response relation study
-
Bouhnik, Y., L. Raskine, G. Simoneau, E. Vicaut, C. Neut, B. Flourie, F. Brouns, and F. R. Bornet. 2004. The capacity of nondigestible carbohydrates to stimulate fecal bifidobacteria in healthy humans: a double-blind, randomized, placebo-controlled, parallel-group, dose-response relation study. Am. J. Clin. Nutr. 80:1658-1664.
-
(2004)
Am. J. Clin. Nutr
, vol.80
, pp. 1658-1664
-
-
Bouhnik, Y.1
Raskine, L.2
Simoneau, G.3
Vicaut, E.4
Neut, C.5
Flourie, B.6
Brouns, F.7
Bornet, F.R.8
-
37
-
-
15144352558
-
Comparative genetics of the inv-spa invasion gene complex of Salmonella enterica
-
Boyd, E. F., J. Li, H. Ochman, and R. K. Selander. 1997. Comparative genetics of the inv-spa invasion gene complex of Salmonella enterica. J. Bacteriol. 179:1985-1991.
-
(1997)
J. Bacteriol
, vol.179
, pp. 1985-1991
-
-
Boyd, E.F.1
Li, J.2
Ochman, H.3
Selander, R.K.4
-
38
-
-
0035177858
-
-
Brennan, M. J., G. Delogu, Y. Chen, S. Bardarov, J. Kriakov, M. Alavi, and W. R. Jacobs, Jr. 2001. Evidence that mycobacterial PE_PGRS proteins are cell surface constituents that influence interactions with other cells. Infect. Immun. 69:7326-7333.
-
Brennan, M. J., G. Delogu, Y. Chen, S. Bardarov, J. Kriakov, M. Alavi, and W. R. Jacobs, Jr. 2001. Evidence that mycobacterial PE_PGRS proteins are cell surface constituents that influence interactions with other cells. Infect. Immun. 69:7326-7333.
-
-
-
-
39
-
-
0034991227
-
Corynebacterium mooreparkense sp. nov. and Corynebacterium casei sp. nov., isolated from the surface of a smear-ripened cheese
-
Brennan, N. M., R. Brown, M. Goodfellow, A. C. Ward, T. P. Beresford, P. J. Simpson, P. F. Fox, and T. M. Cogan. 2001. Corynebacterium mooreparkense sp. nov. and Corynebacterium casei sp. nov., isolated from the surface of a smear-ripened cheese. Int. J. Syst. Evol. Microbiol. 51:843-852.
-
(2001)
Int. J. Syst. Evol. Microbiol
, vol.51
, pp. 843-852
-
-
Brennan, N.M.1
Brown, R.2
Goodfellow, M.3
Ward, A.C.4
Beresford, T.P.5
Simpson, P.J.6
Fox, P.F.7
Cogan, T.M.8
-
40
-
-
0037224286
-
Evidence that plant-like genes in Chlamydia species reflect an ancestral relationship between Chlamydiaceae, cyanobacteria, and the chloroplast
-
Brinkman, F. S., J. L. Blanchard, A. Cherkasov, Y. Av-Gay, R. C. Brunham, R. C. Fernandez, B. B. Finlay, S. P. Otto, B. F. Ouellette, P. J. Keeling, A. M. Rose, R. E. Hancock, S. J. Jones, and H. Greberg. 2002. Evidence that plant-like genes in Chlamydia species reflect an ancestral relationship between Chlamydiaceae, cyanobacteria, and the chloroplast. Genome Res. 12:1159-1167.
-
(2002)
Genome Res
, vol.12
, pp. 1159-1167
-
-
Brinkman, F.S.1
Blanchard, J.L.2
Cherkasov, A.3
Av-Gay, Y.4
Brunham, R.C.5
Fernandez, R.C.6
Finlay, B.B.7
Otto, S.P.8
Ouellette, B.F.9
Keeling, P.J.10
Rose, A.M.11
Hancock, R.E.12
Jones, S.J.13
Greberg, H.14
-
41
-
-
0037133653
-
A new evolutionary scenario for the Mycobacterium tuberculosis complex
-
Brosch, R., S. V. Gordon, M. Marmiesse, P. Brodin, C. Buchrieser, K. Eiglmeier, T. Garnier, C. Gutierrez, G. Hewinson, K. Kremer, L. M. Parsons, A. S. Pym, S. Samper, D. van Soolingen, and S. T. Cole. 2002. A new evolutionary scenario for the Mycobacterium tuberculosis complex. Proc. Natl. Acad. Sci. USA 99:3684-3689.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 3684-3689
-
-
Brosch, R.1
Gordon, S.V.2
Marmiesse, M.3
Brodin, P.4
Buchrieser, C.5
Eiglmeier, K.6
Garnier, T.7
Gutierrez, C.8
Hewinson, G.9
Kremer, K.10
Parsons, L.M.11
Pym, A.S.12
Samper, S.13
van Soolingen, D.14
Cole, S.T.15
-
42
-
-
0002705558
-
Nocardia, Rhodococcus, Gordona, Actinomadura, Streptomyces, and other actinomycetes of medical importance
-
P. R. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover, and R. H. Yolken ed, 7th ed. American Society for Microbiology, Washington, DC
-
Brown, J. M., M. M. McNeil, and E. P. Desmond. 1999. Nocardia, Rhodococcus, Gordona, Actinomadura, Streptomyces, and other actinomycetes of medical importance, p. 370-398. In P. R. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover, and R. H. Yolken (ed.), Manual of clinical microbiology, 7th ed. American Society for Microbiology, Washington, DC.
-
(1999)
Manual of clinical microbiology
, pp. 370-398
-
-
Brown, J.M.1
McNeil, M.M.2
Desmond, E.P.3
-
43
-
-
0034942865
-
Universal trees based on large combined protein sequence data sets
-
Brown, J. R., C. J. Douady, M. J. Italia, W. E. Marshall, and M. J. Stanhope. 2001. Universal trees based on large combined protein sequence data sets. Nat. Genet. 28:281-285.
-
(2001)
Nat. Genet
, vol.28
, pp. 281-285
-
-
Brown, J.R.1
Douady, C.J.2
Italia, M.J.3
Marshall, W.E.4
Stanhope, M.J.5
-
44
-
-
0030803306
-
Transcriptional silencing by the mycobacteriophage L5 repressor
-
Brown, K. L., G. J. Sarkis, C. Wadsworth, and G. F. Hatfull. 1997. Transcriptional silencing by the mycobacteriophage L5 repressor. EMBO J. 16:5914-5921.
-
(1997)
EMBO J
, vol.16
, pp. 5914-5921
-
-
Brown, K.L.1
Sarkis, G.J.2
Wadsworth, C.3
Hatfull, G.F.4
-
45
-
-
23444436388
-
Insights in the pathogenic potential of Propionibacterium acnes from its complete genome
-
Bruggemann, H. 2005. Insights in the pathogenic potential of Propionibacterium acnes from its complete genome. Semin. Cutan. Med. Surg. 24:67-72.
-
(2005)
Semin. Cutan. Med. Surg
, vol.24
, pp. 67-72
-
-
Bruggemann, H.1
-
46
-
-
3442895921
-
The complete genome sequence of Propionibacterium acnes, a commensal of human skin
-
Bruggemann, H., A. Henne, F. Hoster, H. Liesegang, A. Wiezer, A. Strittmatter, S. Hujer, P. Durre, and G. Gottschalk. 2004. The complete genome sequence of Propionibacterium acnes, a commensal of human skin. Science 305:671-673.
-
(2004)
Science
, vol.305
, pp. 671-673
-
-
Bruggemann, H.1
Henne, A.2
Hoster, F.3
Liesegang, H.4
Wiezer, A.5
Strittmatter, A.6
Hujer, S.7
Durre, P.8
Gottschalk, G.9
-
47
-
-
25444441531
-
The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium eficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences
-
Brune, I., K. Brinkrolf, J. Kalinowski, A. Puhler, and A. Tauch. 2005. The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium eficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences. BMC Genomics 6:86.
-
(2005)
BMC Genomics
, vol.6
, pp. 86
-
-
Brune, I.1
Brinkrolf, K.2
Kalinowski, J.3
Puhler, A.4
Tauch, A.5
-
48
-
-
33644596184
-
The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum
-
Brune, I., H. Werner, A. T. Huser, J. Kalinowski, A. Puhler, and A. Tauch. 2006. The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum. BMC Genomics 7:21.
-
(2006)
BMC Genomics
, vol.7
, pp. 21
-
-
Brune, I.1
Werner, H.2
Huser, A.T.3
Kalinowski, J.4
Puhler, A.5
Tauch, A.6
-
49
-
-
0034879415
-
Identification of 54 mycobacterial species by PCR-restriction fragment length polymorphism analysis of the hsp65 gene
-
Brunello, F., M. Ligozzi, E. Cristelli, S. Bonora, E. Tortoli, and R. Fontana. 2001. Identification of 54 mycobacterial species by PCR-restriction fragment length polymorphism analysis of the hsp65 gene. J. Clin. Microbiol. 39:2799-2806.
-
(2001)
J. Clin. Microbiol
, vol.39
, pp. 2799-2806
-
-
Brunello, F.1
Ligozzi, M.2
Cristelli, E.3
Bonora, S.4
Tortoli, E.5
Fontana, R.6
-
50
-
-
4544321685
-
Phages and the evolution of bacterial pathogens: From genomic rearrangements to lysogenic conversion
-
Brussow, H., C. Canchaya, and W. D. Hardt. 2004. Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiol. Mol. Biol. Rev. 68:560-602.
-
(2004)
Microbiol. Mol. Biol. Rev
, vol.68
, pp. 560-602
-
-
Brussow, H.1
Canchaya, C.2
Hardt, W.D.3
-
51
-
-
0028839801
-
Tissue-specific glycogen branching isoenzymes in a multicellular prokaryote, Streptomyces coelicolor A3(2)
-
Bruton, C. J., K. A. Plaskitt, and K. F. Chater. 1995. Tissue-specific glycogen branching isoenzymes in a multicellular prokaryote, Streptomyces coelicolor A3(2). Mol. Microbiol. 18:89-99.
-
(1995)
Mol. Microbiol
, vol.18
, pp. 89-99
-
-
Bruton, C.J.1
Plaskitt, K.A.2
Chater, K.F.3
-
52
-
-
33646049337
-
Complete nucleotide sequence and genome analysis of bacteriophage BFK20 - a lytic phage of the industrial producer Brevibacterfum flavum
-
Bukovska, G., L. Klucar, C. Vlcek, J. Adamovic, J. Turna, and J. Timko. 2006. Complete nucleotide sequence and genome analysis of bacteriophage BFK20 - a lytic phage of the industrial producer Brevibacterfum flavum. Virology 348:57-71.
-
(2006)
Virology
, vol.348
, pp. 57-71
-
-
Bukovska, G.1
Klucar, L.2
Vlcek, C.3
Adamovic, J.4
Turna, J.5
Timko, J.6
-
53
-
-
0346272791
-
Microbiology's principle of bionlms as a major factor in the pathogenesis of acne vulgaris
-
Burkhart, C. N., and C. G. Burkhart. 2003. Microbiology's principle of bionlms as a major factor in the pathogenesis of acne vulgaris. Int. J. Dermatol. 42:925-927.
-
(2003)
Int. J. Dermatol
, vol.42
, pp. 925-927
-
-
Burkhart, C.N.1
Burkhart, C.G.2
-
54
-
-
0037565104
-
The SmtB/ArsR family of metalloregulatory transcriptional repressors: Structural insights into prokaryotic metal resistance
-
Busenlehner, L. S., M. A. Pennella, and D. P. Giedroc. 2003. The SmtB/ArsR family of metalloregulatory transcriptional repressors: structural insights into prokaryotic metal resistance. FEMS Microbiol. Rev. 27:131-143.
-
(2003)
FEMS Microbiol. Rev
, vol.27
, pp. 131-143
-
-
Busenlehner, L.S.1
Pennella, M.A.2
Giedroc, D.P.3
-
55
-
-
0000812428
-
Identification of a virulence gene cluster of Mycobacterium tuberculosis by signature-tagged transposon mutagenesis
-
Camacho, L. R., D. Ensergueix, E. Perez, B. Gicquel, and C. Guilhot. 1999. Identification of a virulence gene cluster of Mycobacterium tuberculosis by signature-tagged transposon mutagenesis. Mol. Microbiol. 34:257-267.
-
(1999)
Mol. Microbiol
, vol.34
, pp. 257-267
-
-
Camacho, L.R.1
Ensergueix, D.2
Perez, E.3
Gicquel, B.4
Guilhot, C.5
-
56
-
-
0026480991
-
Chromosomal insertion sites for phages and plasmids
-
Campbell, A. M. 1992. Chromosomal insertion sites for phages and plasmids. J. Bacteriol. 174:7495-7499.
-
(1992)
J. Bacteriol
, vol.174
, pp. 7495-7499
-
-
Campbell, A.M.1
-
57
-
-
0038724281
-
Prophage genomics
-
Canchaya, C., C. Proux, G. Fournous, A. Bruttin, and H. Brussow. 2003. Prophage genomics. Microbiol. Mol. Biol. Rev. 67:238-276.
-
(2003)
Microbiol. Mol. Biol. Rev
, vol.67
, pp. 238-276
-
-
Canchaya, C.1
Proux, C.2
Fournous, G.3
Bruttin, A.4
Brussow, H.5
-
58
-
-
1542329628
-
Evaluation of the rrn operon copy number in Bifidobacterium using real-time PCR
-
Candela, M., B. Vitali, D. Matteuzzi, and P. Brigidi. 2004. Evaluation of the rrn operon copy number in Bifidobacterium using real-time PCR. Lett. Appl. Microbiol. 38:229-232.
-
(2004)
Lett. Appl. Microbiol
, vol.38
, pp. 229-232
-
-
Candela, M.1
Vitali, B.2
Matteuzzi, D.3
Brigidi, P.4
-
59
-
-
0037665941
-
Transcription regulation and environmental adaptation in bacteria
-
Cases, I., V. de Lorenzo, and C. A. Ouzounis. 2003. Transcription regulation and environmental adaptation in bacteria. Trends Microbiol. 11:248-253.
-
(2003)
Trends Microbiol
, vol.11
, pp. 248-253
-
-
Cases, I.1
de Lorenzo, V.2
Ouzounis, C.A.3
-
60
-
-
10744229660
-
-
Cerdeno-Tarraga, A. M., A. Efstratiou, L. G. Dover, M. T. Holden, M. Pallen, S. D. Bentley, G. S. Besra, C. Churcher, K. D. James, A. De Zoysa, T. Chillingworth, A. Cronin, L. Dowd, T. Feltwell, N. Hamlin, S. Holroyd, K. Jagels, S. Moule, M. A. Quail, E. Rabbinowitsch, K. M. Rutherford, N. R. Thomson, L. Unwin, S. Whitehead, B. G. Barrell, and J. Parkhill. 2003. The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129. Nucleic Acids Res. 31:6516-6523.
-
Cerdeno-Tarraga, A. M., A. Efstratiou, L. G. Dover, M. T. Holden, M. Pallen, S. D. Bentley, G. S. Besra, C. Churcher, K. D. James, A. De Zoysa, T. Chillingworth, A. Cronin, L. Dowd, T. Feltwell, N. Hamlin, S. Holroyd, K. Jagels, S. Moule, M. A. Quail, E. Rabbinowitsch, K. M. Rutherford, N. R. Thomson, L. Unwin, S. Whitehead, B. G. Barrell, and J. Parkhill. 2003. The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129. Nucleic Acids Res. 31:6516-6523.
-
-
-
-
61
-
-
15244356118
-
Linear chromosomes in Bacteria: No longer going round in circles
-
N. P. Higgins ed, American Society for Microbiology, Washington, DC
-
Chaconas, G., and C. W. Chen. 2005. Linear chromosomes in Bacteria: no longer going round in circles, p. 525-539. In N. P. Higgins (ed.), The bacterial chromosomes. American Society for Microbiology, Washington, DC.
-
(2005)
The bacterial chromosomes
, pp. 525-539
-
-
Chaconas, G.1
Chen, C.W.2
-
62
-
-
0345492332
-
Synergy and contingency as driving forces for the evolution of multiple secondary metabolite production by Streptomyces species
-
Challis, G. L., and D. A. Hopwood. 2003. Synergy and contingency as driving forces for the evolution of multiple secondary metabolite production by Streptomyces species. Proc. Natl. Acad. Sci. USA 100(Suppl. 2): 14555-14561.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, Issue.SUPPL. 2
, pp. 14555-14561
-
-
Challis, G.L.1
Hopwood, D.A.2
-
63
-
-
33746865723
-
Streptomyces inside-out: A new perspective on the bacteria that provide us with antibiotics
-
Chater, K. F. 2006. Streptomyces inside-out: a new perspective on the bacteria that provide us with antibiotics. Philos. Trans. R. Soc. Lond. B 361:761-768.
-
(2006)
Philos. Trans. R. Soc. Lond. B
, vol.361
, pp. 761-768
-
-
Chater, K.F.1
-
64
-
-
0031747318
-
Taking a genetic scalpel to the Streptomyces colony
-
Chater, K. F. 1998. Taking a genetic scalpel to the Streptomyces colony. Microbiology 144:1465-1478.
-
(1998)
Microbiology
, vol.144
, pp. 1465-1478
-
-
Chater, K.F.1
-
65
-
-
33746908131
-
The evolution of development in Streptomyces analysed by genome comparisons
-
Chater, K. F., and G. Chandra. 2006. The evolution of development in Streptomyces analysed by genome comparisons. FEMS Microbiol. Rev. 30: 651-672.
-
(2006)
FEMS Microbiol. Rev
, vol.30
, pp. 651-672
-
-
Chater, K.F.1
Chandra, G.2
-
66
-
-
0037383031
-
Signalling early developmental events in two highly diverged Streptomyces species
-
Chater, K. F., and S. Horinouchi. 2003. Signalling early developmental events in two highly diverged Streptomyces species. Mol. Microbiol. 48:9-15.
-
(2003)
Mol. Microbiol
, vol.48
, pp. 9-15
-
-
Chater, K.F.1
Horinouchi, S.2
-
67
-
-
45449109970
-
Streptomyces linear plasmids: Their discovery, functions, interactions with other replicons, and evolutionary significance
-
F. Meinhardt and F. Klassen ed, Springer, New York, NY
-
Chater, K. F., and H. Kinashi. 2007. Streptomyces linear plasmids: their discovery, functions, interactions with other replicons, and evolutionary significance, p. 237-278. In F. Meinhardt and F. Klassen (ed.), Microbial linear plasmids. Microbiology monographs. Springer, New York, NY.
-
(2007)
Microbial linear plasmids. Microbiology monographs
, pp. 237-278
-
-
Chater, K.F.1
Kinashi, H.2
-
68
-
-
0141677745
-
A supramolecular complex in the environmental stress signalling pathway of Bacillus subtilis
-
Chen, C. C., R. J. Lewis, R. Harris, M. D. Yudkin, and O. Delumeau. 2003. A supramolecular complex in the environmental stress signalling pathway of Bacillus subtilis. Mol. Microbiol. 49:1657-1669.
-
(2003)
Mol. Microbiol
, vol.49
, pp. 1657-1669
-
-
Chen, C.C.1
Lewis, R.J.2
Harris, R.3
Yudkin, M.D.4
Delumeau, O.5
-
69
-
-
0029882801
-
Complications and implications of linear bacterial chromosomes
-
Chen, C. W. 1996. Complications and implications of linear bacterial chromosomes. Trends Genet. 12:192-196.
-
(1996)
Trends Genet
, vol.12
, pp. 192-196
-
-
Chen, C.W.1
-
70
-
-
77149164609
-
Streptomyces linear plasmids: Replication and telomeres
-
F. Meinhardt and F. Klassen ed, Springer, New York, NY
-
Chen, C. W. 2007. Streptomyces linear plasmids: replication and telomeres, p. 145-160. In F. Meinhardt and F. Klassen (ed.), Microbial linear plasmids. Microbiology monographs. Springer, New York, NY.
-
(2007)
Microbial linear plasmids. Microbiology monographs
, pp. 145-160
-
-
Chen, C.W.1
-
71
-
-
2942689719
-
Corynebacterium halotolerans sp. nov., isolated from saline soil in the west of China
-
Chen, H. H., W. J. Li, S. K. Tang, R. M. Kroppenstedt, E. Stackebrandt, L. H. Xu, and C. L. Jiang. 2004. Corynebacterium halotolerans sp. nov., isolated from saline soil in the west of China. Int. J. Syst. Evol. Microbiol. 54:779-782.
-
(2004)
Int. J. Syst. Evol. Microbiol
, vol.54
, pp. 779-782
-
-
Chen, H.H.1
Li, W.J.2
Tang, S.K.3
Kroppenstedt, R.M.4
Stackebrandt, E.5
Xu, L.H.6
Jiang, C.L.7
-
72
-
-
22544481439
-
Phage abortive infection in lactococci: Variations on a theme
-
Chopin, M. C., A. Chopin, and E. Bidnenko. 2005. Phage abortive infection in lactococci: variations on a theme. Curr. Opin. Microbiol. 8:473-479.
-
(2005)
Curr. Opin. Microbiol
, vol.8
, pp. 473-479
-
-
Chopin, M.C.1
Chopin, A.2
Bidnenko, E.3
-
73
-
-
0034973583
-
Tetracycline antibiotics: Mode of action, applications, molecular biology, and epidemiology of bacterial resistance
-
Chopra, I., and M. Roberts. 2001. Tetracycline antibiotics: mode of action, applications, molecular biology, and epidemiology of bacterial resistance. Microbiol. Mol. Biol. Rev. 65:232-260.
-
(2001)
Microbiol. Mol. Biol. Rev
, vol.65
, pp. 232-260
-
-
Chopra, I.1
Roberts, M.2
-
74
-
-
0242286555
-
PPE antigen Rv2430c of Mycobacterium tuberculosis induces a strong B-cell response
-
Choudhary, R. K., S. Mukhopadhyay, P. Chakhaiyar, N. Sharma, K. J. Murthy, V. M. Katoch, and S. E. Hasnain. 2003. PPE antigen Rv2430c of Mycobacterium tuberculosis induces a strong B-cell response. Infect. Immun. 71:6338-6343.
-
(2003)
Infect. Immun
, vol.71
, pp. 6338-6343
-
-
Choudhary, R.K.1
Mukhopadhyay, S.2
Chakhaiyar, P.3
Sharma, N.4
Murthy, K.J.5
Katoch, V.M.6
Hasnain, S.E.7
-
75
-
-
33750964021
-
Evolution of the terminal regions of the Streptomyces linear chromosome
-
Choulet, F., B. Aigle, A. Gallois, S. Mangenot, C. Gerbaud, C. Truong, F. X. Francou, C. Fourrier, M. Guerineau, B. Decaris, V. Barbe, J. L. Peruodet, and P. Leblond. 2006. Evolution of the terminal regions of the Streptomyces linear chromosome. Mol. Biol. Evol. 23:2361-2369.
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 2361-2369
-
-
Choulet, F.1
Aigle, B.2
Gallois, A.3
Mangenot, S.4
Gerbaud, C.5
Truong, C.6
Francou, F.X.7
Fourrier, C.8
Guerineau, M.9
Decaris, B.10
Barbe, V.11
Peruodet, J.L.12
Leblond, P.13
-
76
-
-
33748765802
-
Intraspecific variability of the terminal inverted repeats of the linear chromosome of Streptomyces ambofaciens
-
Choulet, F., A. Gallois, B. Aigle, S. Mangenot, C. Gerbaud, C. Truong, F. X. Francou, F. Borges, C. Fourrier, M. Guerineau, B. Decaris, V. Barbe, J. L. Pernodet, and P. Leblond. 2006. Intraspecific variability of the terminal inverted repeats of the linear chromosome of Streptomyces ambofaciens. J. Bacteriol. 188:6599-6610.
-
(2006)
J. Bacteriol
, vol.188
, pp. 6599-6610
-
-
Choulet, F.1
Gallois, A.2
Aigle, B.3
Mangenot, S.4
Gerbaud, C.5
Truong, C.6
Francou, F.X.7
Borges, F.8
Fourrier, C.9
Guerineau, M.10
Decaris, B.11
Barbe, V.12
Pernodet, J.L.13
Leblond, P.14
-
77
-
-
0032957449
-
DnaA boxes are important elements in setting the initiation mass of Escherichia coli
-
Christensen, B. B., T. Atlung, and F. G. Hansen. 1999. DnaA boxes are important elements in setting the initiation mass of Escherichia coli. J. Bacteriol. 181:2683-2688.
-
(1999)
J. Bacteriol
, vol.181
, pp. 2683-2688
-
-
Christensen, B.B.1
Atlung, T.2
Hansen, F.G.3
-
78
-
-
0035067250
-
DNA shuffling method for generating highly recombined genes and evolved enzymes
-
Coco, W. M., W. E. Levinson, M. J. Crist, H. J. Hektor, A. Darzins, P. T. Pienkos, C. H. Squires, and D. J. Monticello. 2001. DNA shuffling method for generating highly recombined genes and evolved enzymes. Nat. Biotechnol. 19:354-359.
-
(2001)
Nat. Biotechnol
, vol.19
, pp. 354-359
-
-
Coco, W.M.1
Levinson, W.E.2
Crist, M.J.3
Hektor, H.J.4
Darzins, A.5
Pienkos, P.T.6
Squires, C.H.7
Monticello, D.J.8
-
79
-
-
15944379273
-
Towards a prokaryotic genomic taxonomy
-
Coenye, T., D. Gevers, Y. Van de Peer, P. Vandamme, and J. Swings. 2005. Towards a prokaryotic genomic taxonomy. FEMS Microbiol. Rev. 29:147-167.
-
(2005)
FEMS Microbiol. Rev
, vol.29
, pp. 147-167
-
-
Coenye, T.1
Gevers, D.2
Van de Peer, Y.3
Vandamme, P.4
Swings, J.5
-
80
-
-
0035527404
-
Bacterial species and speciation
-
Cohan, F. M. 2001. Bacterial species and speciation. Syst. Biol. 50:513-524.
-
(2001)
Syst. Biol
, vol.50
, pp. 513-524
-
-
Cohan, F.M.1
-
81
-
-
0036407157
-
What are bacterial species?
-
Cohan, F. M. 2002. What are bacterial species? Annu. Rev. Microbiol. 56:457-487.
-
(2002)
Annu. Rev. Microbiol
, vol.56
, pp. 457-487
-
-
Cohan, F.M.1
-
82
-
-
0033039066
-
Learning from the genome sequence of Mycobacterium tuberculosis H37Rv
-
Cole, S. T. 1999. Learning from the genome sequence of Mycobacterium tuberculosis H37Rv. FEBS Lett. 452:7-10.
-
(1999)
FEBS Lett
, vol.452
, pp. 7-10
-
-
Cole, S.T.1
-
83
-
-
0032508046
-
-
Cole, S. T., R. Brosch, J. Parkhill, T. Garnier, C. Churcher, D. Harris, S. V. Gordon, K. Eiglmeier, S. Gas, C. E. Barry III, F. Tekaia, K. Badcock, D. Basham, D. Brown, T. Chillingworth, R. Connor, R. Davies, K. Devlin, T. Feltwell, S. Gentles, N. Hamlin, S. Holroyd, T. Hornsby, K. Jagels, A. Krogh, J. McLean, S. Moule, L. Murphy, K. Oliver, J. Osborne, M. A. Quail, M. A. Rajandream, J. Rogers, S. Rutter, K. Seeger, J. Skelton, R. Squares, S. Squares, J. E. Sulston, K. Taylor, S. Whitehead, and B. G. Barrell. 1998. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393:537-544.
-
Cole, S. T., R. Brosch, J. Parkhill, T. Garnier, C. Churcher, D. Harris, S. V. Gordon, K. Eiglmeier, S. Gas, C. E. Barry III, F. Tekaia, K. Badcock, D. Basham, D. Brown, T. Chillingworth, R. Connor, R. Davies, K. Devlin, T. Feltwell, S. Gentles, N. Hamlin, S. Holroyd, T. Hornsby, K. Jagels, A. Krogh, J. McLean, S. Moule, L. Murphy, K. Oliver, J. Osborne, M. A. Quail, M. A. Rajandream, J. Rogers, S. Rutter, K. Seeger, J. Skelton, R. Squares, S. Squares, J. E. Sulston, K. Taylor, S. Whitehead, and B. G. Barrell. 1998. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393:537-544.
-
-
-
-
84
-
-
0035931926
-
-
Cole, S. T., K. Eiglmeier, J. Parkhill, K. D. James, N. R. Thomson, P. R. Wheeler, N. Honore, T. Garnier, C. Churcher, D. Harris, K. Mungall, D. Basham, D. Brown, T. Chillingworth, R. Connor, R. M. Davies, K. Devlin, S. Duthoy, T. Feltwell, A. Fraser, N. Hamlin, S. Holroyd, T. Hornsby, K. Jagels, C. Lacroix, J. Maclean, S. Moule, L. Murphy, K. Oliver, M. A. Quail, M. A. Rajandream, K. M. Rutherford, S. Rutter, K. Seeger, S. Simon, M. Simmonds, J. Skelton, R. Squares, S. Squares, K. Stevens, K. Taylor, S. Whitehead, J. R. Woodward, and B. G. Barrell. 2001. Massive gene decay in the leprosy bacillus. Nature 409:1007-1011.
-
Cole, S. T., K. Eiglmeier, J. Parkhill, K. D. James, N. R. Thomson, P. R. Wheeler, N. Honore, T. Garnier, C. Churcher, D. Harris, K. Mungall, D. Basham, D. Brown, T. Chillingworth, R. Connor, R. M. Davies, K. Devlin, S. Duthoy, T. Feltwell, A. Fraser, N. Hamlin, S. Holroyd, T. Hornsby, K. Jagels, C. Lacroix, J. Maclean, S. Moule, L. Murphy, K. Oliver, M. A. Quail, M. A. Rajandream, K. M. Rutherford, S. Rutter, K. Seeger, S. Simon, M. Simmonds, J. Skelton, R. Squares, S. Squares, K. Stevens, K. Taylor, S. Whitehead, J. R. Woodward, and B. G. Barrell. 2001. Massive gene decay in the leprosy bacillus. Nature 409:1007-1011.
-
-
-
-
85
-
-
0035704260
-
Repetitive sequences in Mycobacterium leprae and their impact on genome plasticity
-
Cole, S. T., P. Supply, and N. Honore. 2001. Repetitive sequences in Mycobacterium leprae and their impact on genome plasticity. Lepr. Rev. 72:449-461.
-
(2001)
Lepr. Rev
, vol.72
, pp. 449-461
-
-
Cole, S.T.1
Supply, P.2
Honore, N.3
-
86
-
-
0033806669
-
The bovine tubercle bacillus
-
Collins, C. H. 2000. The bovine tubercle bacillus. Br. J. Biomed. Sci. 57: 234-240.
-
(2000)
Br. J. Biomed. Sci
, vol.57
, pp. 234-240
-
-
Collins, C.H.1
-
88
-
-
0029118344
-
-
Collins, D. M., R. P. Kawakami, G. W. de Lisle, L. Pascopella, B. R. Bloom, and W. R. Jacobs, Jr. 1995. Mutation of the principal sigma factor causes loss of virulence in a strain of the Mycobacterium tuberculosis complex. Proc. Natl. Acad. Sci. USA 92:8036-8040.
-
Collins, D. M., R. P. Kawakami, G. W. de Lisle, L. Pascopella, B. R. Bloom, and W. R. Jacobs, Jr. 1995. Mutation of the principal sigma factor causes loss of virulence in a strain of the Mycobacterium tuberculosis complex. Proc. Natl. Acad. Sci. USA 92:8036-8040.
-
-
-
-
90
-
-
2942668170
-
Corynebacterium caspium sp. nov., from a Caspian seal (Phoca caspica)
-
Collins, M. D., L. Hoyles, G. Foster, and E. Falsen. 2004. Corynebacterium caspium sp. nov., from a Caspian seal (Phoca caspica). Int. J. Syst. Evol. Microbiol. 54:925-928.
-
(2004)
Int. J. Syst. Evol. Microbiol
, vol.54
, pp. 925-928
-
-
Collins, M.D.1
Hoyles, L.2
Foster, G.3
Falsen, E.4
-
91
-
-
0000980748
-
The role of pectic enzymes in plant pathogenesis
-
Collmer, A., and N. T. Keen. 1986. The role of pectic enzymes in plant pathogenesis. Annu. Rev. Phytopathol. 24:383-409.
-
(1986)
Annu. Rev. Phytopathol
, vol.24
, pp. 383-409
-
-
Collmer, A.1
Keen, N.T.2
-
92
-
-
2142808787
-
A comparative genome analysis identifies distinct sorting pathways in gram-positive bacteria
-
Comfort, D., and R. T. Clubb. 2004. A comparative genome analysis identifies distinct sorting pathways in gram-positive bacteria. Infect. Immun. 72:2710-2722.
-
(2004)
Infect. Immun
, vol.72
, pp. 2710-2722
-
-
Comfort, D.1
Clubb, R.T.2
-
93
-
-
14544279302
-
A protein secretion pathway critical for Mycobacterium tuberculosis virulence is conserved and functional in Mycobacterium smegmatis
-
Converse, S. E., and J. S. Cox. 2005. A protein secretion pathway critical for Mycobacterium tuberculosis virulence is conserved and functional in Mycobacterium smegmatis. J. Bacteriol. 187:1238- 1245.
-
(2005)
J. Bacteriol
, vol.187
, pp. 1238-1245
-
-
Converse, S.E.1
Cox, J.S.2
-
94
-
-
0026619682
-
Bacterial sialidases - roles in pathogenicity and nutrition
-
Corfield, T. 1992. Bacterial sialidases - roles in pathogenicity and nutrition. Glycobiology 2:509-521.
-
(1992)
Glycobiology
, vol.2
, pp. 509-521
-
-
Corfield, T.1
-
95
-
-
1442274707
-
Molecular characterization of three plasmids from Bifidobacterium longum
-
Corneau, N., E. Emond, and G. LaPointe. 2004. Molecular characterization of three plasmids from Bifidobacterium longum. Plasmid 51:87-100.
-
(2004)
Plasmid
, vol.51
, pp. 87-100
-
-
Corneau, N.1
Emond, E.2
LaPointe, G.3
-
96
-
-
0021045506
-
Effects of oxygen concentration on biomass production, maximum specific growth rate and extracellular enzyme production by three species of cutaneous propionibacteria grown in continuous culture
-
Cove, J. H., K. T. Holland, and W. J. Cunliffe. 1983. Effects of oxygen concentration on biomass production, maximum specific growth rate and extracellular enzyme production by three species of cutaneous propionibacteria grown in continuous culture. J. Gen. Microbiol. 129:3327-3334.
-
(1983)
J. Gen. Microbiol
, vol.129
, pp. 3327-3334
-
-
Cove, J.H.1
Holland, K.T.2
Cunliffe, W.J.3
-
97
-
-
0014151680
-
Altered base ratios in the DNA of an Escherichia coli mutator strain
-
Cox, E. C., and C. Yanofsky. 1967. Altered base ratios in the DNA of an Escherichia coli mutator strain. Proc. Natl. Acad. Sci. USA 58:1895-1902.
-
(1967)
Proc. Natl. Acad. Sci. USA
, vol.58
, pp. 1895-1902
-
-
Cox, E.C.1
Yanofsky, C.2
-
98
-
-
0025105599
-
Coryneform bacteria in infectious diseases: Clinical and laboratory aspects
-
Coyle, M. B., and B. A. Lipsky. 1990. Coryneform bacteria in infectious diseases: clinical and laboratory aspects. Clin. Microbiol. Rev. 3:227-246.
-
(1990)
Clin. Microbiol. Rev
, vol.3
, pp. 227-246
-
-
Coyle, M.B.1
Lipsky, B.A.2
-
99
-
-
0346690100
-
Studies on the cytotoxic effects of Propionibacterium acnes strains isolated from cornea
-
Csukas, Z., B. Banizs, and F. Rozgonyi. 2004. Studies on the cytotoxic effects of Propionibacterium acnes strains isolated from cornea. Microb. Pathog. 36:171-174.
-
(2004)
Microb. Pathog
, vol.36
, pp. 171-174
-
-
Csukas, Z.1
Banizs, B.2
Rozgonyi, F.3
-
100
-
-
0035050284
-
Bap, a Staphylococcus aureus surface protein involved in biofilm formation
-
Cucarella, C., C. Solano, J. Valle, B. Amorena, I. Lasa, and J. R. Penades. 2001. Bap, a Staphylococcus aureus surface protein involved in biofilm formation. J. Bacteriol. 183:2888-2896.
-
(2001)
J. Bacteriol
, vol.183
, pp. 2888-2896
-
-
Cucarella, C.1
Solano, C.2
Valle, J.3
Amorena, B.4
Lasa, I.5
Penades, J.R.6
-
101
-
-
0032452982
-
The envelope layers of mycobacteria with reference to their pathogenicity
-
Daffe, M., and P. Draper. 1998. The envelope layers of mycobacteria with reference to their pathogenicity. Adv. Microb. Physiol. 39:131-203.
-
(1998)
Adv. Microb. Physiol
, vol.39
, pp. 131-203
-
-
Daffe, M.1
Draper, P.2
-
102
-
-
31144443605
-
Iterative in vivo assembly of large and complex transgenes by combining the activities of phiC31 integrase and Cre recombinase
-
Dafhnis-Calas, F., Z. Xu, S. Haines, S. K. Malla, M. C. Smith, and W. R. Brown. 2005. Iterative in vivo assembly of large and complex transgenes by combining the activities of phiC31 integrase and Cre recombinase. Nucleic Acids Res. 33:e189.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Dafhnis-Calas, F.1
Xu, Z.2
Haines, S.3
Malla, S.K.4
Smith, M.C.5
Brown, W.R.6
-
103
-
-
34548801639
-
-
Dalton, K. A., A. Thibessard, K. Findlay, and G. H. Kelemen. SigN, an RNA polymerase sigma factor, controls aerial development and defines a novel compartment, the stem, during morphogenesis of Streptomyces coelicor. Mol. Microbiol., in press.
-
Dalton, K. A., A. Thibessard, K. Findlay, and G. H. Kelemen. SigN, an RNA polymerase sigma factor, controls aerial development and defines a novel compartment, the stem, during morphogenesis of Streptomyces coelicor. Mol. Microbiol., in press.
-
-
-
-
104
-
-
0036061865
-
A phylogenomic approach to bacterial phylogeny: Evidence of a core of genes sharing a common history
-
Daubin, V., M. Gouy, and G. Perriere. 2002. A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history. Genome Res. 12:1080-1090.
-
(2002)
Genome Res
, vol.12
, pp. 1080-1090
-
-
Daubin, V.1
Gouy, M.2
Perriere, G.3
-
105
-
-
0037390641
-
G+C3 structuring along the genome: A common feature in prokaryotes
-
Daubin, V., and G. Perriere. 2003. G+C3 structuring along the genome: a common feature in prokaryotes. Mol. Biol. Evol. 20:471-483.
-
(2003)
Mol. Biol. Evol
, vol.20
, pp. 471-483
-
-
Daubin, V.1
Perriere, G.2
-
106
-
-
0000636684
-
Ratoon stunting disease of sugarcane: Isolation of the casual bacterium
-
Davis, M. J., A. G. Gillaspie, R. W. Harris, and R. H. Lawson. 1980. Ratoon stunting disease of sugarcane: isolation of the casual bacterium. Science 210:1365-1367.
-
(1980)
Science
, vol.210
, pp. 1365-1367
-
-
Davis, M.J.1
Gillaspie, A.G.2
Harris, R.W.3
Lawson, R.H.4
-
107
-
-
33645313846
-
Chromosome evolution in the Thermotogales: Large-scale inversions and strain diversification of CRISPR sequences
-
DeBoy, R. T., E. F. Mongodin, J. B. Emerson, and K. E. Nelson. 2006. Chromosome evolution in the Thermotogales: large-scale inversions and strain diversification of CRISPR sequences. J. Bacteriol. 188:2364-2374.
-
(2006)
J. Bacteriol
, vol.188
, pp. 2364-2374
-
-
DeBoy, R.T.1
Mongodin, E.F.2
Emerson, J.B.3
Nelson, K.E.4
-
108
-
-
0027180075
-
Transport and metabolism of glucose and arabinose in Bifidobacterium breve
-
Degnan, B. A., and G. T. Macfarlane. 1993. Transport and metabolism of glucose and arabinose in Bifidobacterium breve. Arch. Microbiol. 160:144-151.
-
(1993)
Arch. Microbiol
, vol.160
, pp. 144-151
-
-
Degnan, B.A.1
Macfarlane, G.T.2
-
109
-
-
0034872325
-
Comparative immune response to PE and PE_GRS antigens of Mycobacterium tuberculosis
-
Delogu, G., and M. J. Brennan. 2001. Comparative immune response to PE and PE_GRS antigens of Mycobacterium tuberculosis. Infect. Immun. 69: 5606-5611.
-
(2001)
Infect. Immun
, vol.69
, pp. 5606-5611
-
-
Delogu, G.1
Brennan, M.J.2
-
110
-
-
0031811125
-
Replication and control of circular bacterial plasmids
-
del Solar, G., R. Giraldo, M. J. Ruiz-Echevarria, M. Espinosa, and R. Diaz-Orejas. 1998. Replication and control of circular bacterial plasmids. Microbiol. Mol. Biol. Rev. 62:434-464.
-
(1998)
Microbiol. Mol. Biol. Rev
, vol.62
, pp. 434-464
-
-
del Solar, G.1
Giraldo, R.2
Ruiz-Echevarria, M.J.3
Espinosa, M.4
Diaz-Orejas, R.5
-
111
-
-
0030785510
-
Structural analysis of the 6 kb cryptic plasmid pFAJ2600 from Rhodococcus erythropolis NI86/21 and construction of Escherichia coli-Rhodococcus shuttle vectors
-
De Mot, R., I. Nagy, A. De Schrijver, P. Pattanapipitpaisal, G. Schoofs, and J. Vanderleyden. 1997. Structural analysis of the 6 kb cryptic plasmid pFAJ2600 from Rhodococcus erythropolis NI86/21 and construction of Escherichia coli-Rhodococcus shuttle vectors. Microbiology 143:3137-3147.
-
(1997)
Microbiology
, vol.143
, pp. 3137-3147
-
-
De Mot, R.1
Nagy, I.2
De Schrijver, A.3
Pattanapipitpaisal, P.4
Schoofs, G.5
Vanderleyden, J.6
-
112
-
-
13244273719
-
A multigene approach to phylogenetic analysis using the genus Mycobacterium as a model
-
Devulder, G., M. Perouse de Montclos, and J. P. Flandrois. 2005. A multigene approach to phylogenetic analysis using the genus Mycobacterium as a model. Int. J. Syst. Evol. Microbiol. 55:293-302.
-
(2005)
Int. J. Syst. Evol. Microbiol
, vol.55
, pp. 293-302
-
-
Devulder, G.1
Perouse de Montclos, M.2
Flandrois, J.P.3
-
113
-
-
0034799370
-
Whole genome plasticity in pathogenic bacteria
-
Dobrindt, U., and J. Hacker. 2001. Whole genome plasticity in pathogenic bacteria. Curr. Opin. Microbiol. 4:550-557.
-
(2001)
Curr. Opin. Microbiol
, vol.4
, pp. 550-557
-
-
Dobrindt, U.1
Hacker, J.2
-
114
-
-
84968054140
-
Nothing in biology makes sense except in the light of evolution
-
Dobzhansky, T. 1973. Nothing in biology makes sense except in the light of evolution. Am. Biol. Teacher 35:125-129.
-
(1973)
Am. Biol. Teacher
, vol.35
, pp. 125-129
-
-
Dobzhansky, T.1
-
115
-
-
0031104967
-
Characterization of the plasmid encoded virulence region pat-1 of phytopathogenic Clavibacter michiganensis subsp. michiganensis
-
Dreier, J., D. Meletzus, and R. Eichenlaub. 1997. Characterization of the plasmid encoded virulence region pat-1 of phytopathogenic Clavibacter michiganensis subsp. michiganensis. Mol. Plant-Microbe Interact. 10:195-206.
-
(1997)
Mol. Plant-Microbe Interact
, vol.10
, pp. 195-206
-
-
Dreier, J.1
Meletzus, D.2
Eichenlaub, R.3
-
116
-
-
0041671086
-
Identification of the gene for beta-fructofuranosidase of Bifidobacterium lactis DSM10140(T) and characterization of the enzyme expressed in Escherichia coli
-
Ehrmann, M. A., M. Korakli, and R. F. Vogel. 2003. Identification of the gene for beta-fructofuranosidase of Bifidobacterium lactis DSM10140(T) and characterization of the enzyme expressed in Escherichia coli. Curr. Microbiol. 46:391-397.
-
(2003)
Curr. Microbiol
, vol.46
, pp. 391-397
-
-
Ehrmann, M.A.1
Korakli, M.2
Vogel, R.F.3
-
117
-
-
0034568798
-
Evidence for symmetric chromosomal inversions around the replication origin in bacteria
-
RESEARCH0011
-
Eisen, J. A., J. F. Heidelberg, O. White, and S. L. Salzberg. 2000. Evidence for symmetric chromosomal inversions around the replication origin in bacteria. Genome Biol. 1:RESEARCH0011.
-
(2000)
Genome Biol
, vol.1
-
-
Eisen, J.A.1
Heidelberg, J.F.2
White, O.3
Salzberg, S.L.4
-
118
-
-
8844259757
-
Building filaments in the air: Aerial morphogenesis in bacteria and fungi
-
Elliot, M. A., and N. J. Talbot. 2004. Building filaments in the air: aerial morphogenesis in bacteria and fungi. Curr. Opin. Microbiol. 7:594-601.
-
(2004)
Curr. Opin. Microbiol
, vol.7
, pp. 594-601
-
-
Elliot, M.A.1
Talbot, N.J.2
-
119
-
-
0028126653
-
The molecular phylogeny and systematics of the actinomycetes
-
Embley, T. M., and E. Stackebrandt. 1994. The molecular phylogeny and systematics of the actinomycetes. Annu. Rev. Microbiol. 48:257-289.
-
(1994)
Annu. Rev. Microbiol
, vol.48
, pp. 257-289
-
-
Embley, T.M.1
Stackebrandt, E.2
-
120
-
-
0033976024
-
-
Evtushenko, L. I., L. V. Dorofeeva, S. A. Subbotin, J. R. Cole, and J. M. Tiedje. 2000. Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on Poa annua, and reclassification of 'Corynebacterium aquaticum' Leifson 1962 as Leifsonia aquatica (ex Leifson 1962) gen. nov., nom. rev., comb. nov. and Clavibacter xyli Davis et al. 1984 with two subspecies as Leifsonia xyli (Davis et al. 1984) gen. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 50:371-380.
-
Evtushenko, L. I., L. V. Dorofeeva, S. A. Subbotin, J. R. Cole, and J. M. Tiedje. 2000. Leifsonia poae gen. nov., sp. nov., isolated from nematode galls on Poa annua, and reclassification of 'Corynebacterium aquaticum' Leifson 1962 as Leifsonia aquatica (ex Leifson 1962) gen. nov., nom. rev., comb. nov. and Clavibacter xyli Davis et al. 1984 with two subspecies as Leifsonia xyli (Davis et al. 1984) gen. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 50:371-380.
-
-
-
-
121
-
-
0029864194
-
Epidemiology of infection by nontuberculous mycobacteria
-
Falkinham, J. O., III. 1996. Epidemiology of infection by nontuberculous mycobacteria. Clin. Microbiol. Rev. 9:177-215.
-
(1996)
Clin. Microbiol. Rev
, vol.9
, pp. 177-215
-
-
Falkinham III, J.O.1
-
122
-
-
0032918958
-
-
Fang, Z., C. Doig, D. T. Kenna, N. Smittipat, P. Palittapongarnpim, B. Watt, and K. J. Forbes. 1999. IS6110-mediated deletions of wild-type chromosomes of Mycobacterium tuberculosis. J. Bacteriol. 181:1014-1020.
-
Fang, Z., C. Doig, D. T. Kenna, N. Smittipat, P. Palittapongarnpim, B. Watt, and K. J. Forbes. 1999. IS6110-mediated deletions of wild-type chromosomes of Mycobacterium tuberculosis. J. Bacteriol. 181:1014-1020.
-
-
-
-
123
-
-
9744264869
-
Corynebacterium ciconiae sp. nov., isolated from the trachea of black storks (Ciconia nigra)
-
Fernandez-Garayzabal, J. F., A. I. Vela, R. Egido, R. A. Hutson, M. P. Lanzarot, M. Fernandez-Garcia, and M. D. Collins. 2004. Corynebacterium ciconiae sp. nov., isolated from the trachea of black storks (Ciconia nigra). Int. J. Syst. Evol. Microbiol. 54:2191-2195.
-
(2004)
Int. J. Syst. Evol. Microbiol
, vol.54
, pp. 2191-2195
-
-
Fernandez-Garayzabal, J.F.1
Vela, A.I.2
Egido, R.3
Hutson, R.A.4
Lanzarot, M.P.5
Fernandez-Garcia, M.6
Collins, M.D.7
-
124
-
-
30744460678
-
-
Filliol, I., A. S. Motiwala, M. Cavatore, W. Qi, M. H. Hazbon, M. Bobadilla del Valle, J. Fyfe, L. Garcia-Garcia, N. Rastogi, C. Sola, T. Zozio, M. I. Guerrero, C. I. Leon, J. Crabtree, S. Angiuoli, K. D. Eisenach, R. Durmaz, M. L. Joloba, A. Rendon, J. Sifuentes-Osornio, A. Ponce de Leon, M. D. Cave, R. Fleischmann, T. S. Whittam, and D. Alland. 2006. Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP set. J. Bacteriol. 188:759-772.
-
Filliol, I., A. S. Motiwala, M. Cavatore, W. Qi, M. H. Hazbon, M. Bobadilla del Valle, J. Fyfe, L. Garcia-Garcia, N. Rastogi, C. Sola, T. Zozio, M. I. Guerrero, C. I. Leon, J. Crabtree, S. Angiuoli, K. D. Eisenach, R. Durmaz, M. L. Joloba, A. Rendon, J. Sifuentes-Osornio, A. Ponce de Leon, M. D. Cave, R. Fleischmann, T. S. Whittam, and D. Alland. 2006. Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP set. J. Bacteriol. 188:759-772.
-
-
-
-
125
-
-
0033231209
-
Whole genome-based phylogenetic analysis of free-living microorganisms
-
Fitz-Gibbon, S. T., and C. H. House. 1999. Whole genome-based phylogenetic analysis of free-living microorganisms. Nucleic Acids Res. 27:4218-4222.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 4218-4222
-
-
Fitz-Gibbon, S.T.1
House, C.H.2
-
126
-
-
0036777599
-
Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains
-
Fleischmann, R. D., D. Alland, J. A. Eisen, L. Carpenter, O. White, J. Peterson, R. DeBoy, R. Dodson, M. Gwinn, D. Haft, E. Hickey, J. F. Kolonay, W. C. Nelson, L. A. Umayam, M. Ermolaeva, S. L. Salzberg, A. Delcher, T. Utterback, J. Weidman, H. Khouri, J. Gill, A. Mikula, W. Bishai, W. R. Jacobs, Jr., J. C. Venter, and C. M. Fraser. 2002. Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains. J. Bacteriol. 184:5479-5490.
-
(2002)
J. Bacteriol
, vol.184
, pp. 5479-5490
-
-
Fleischmann, R.D.1
Alland, D.2
Eisen, J.A.3
Carpenter, L.4
White, O.5
Peterson, J.6
DeBoy, R.7
Dodson, R.8
Gwinn, M.9
Haft, D.10
Hickey, E.11
Kolonay, J.F.12
Nelson, W.C.13
Umayam, L.A.14
Ermolaeva, M.15
Salzberg, S.L.16
Delcher, A.17
Utterback, T.18
Weidman, J.19
Khouri, H.20
Gill, J.21
Mikula, A.22
Bishai, W.23
Jacobs Jr., W.R.24
Venter, J.C.25
Fraser, C.M.26
more..
-
127
-
-
0037362917
-
Molecular organization of exopolysaccharide (EPS) encoding genes on the lactococcal bacteriophage adsorption blocking plasmid, pCI658
-
Forde, A., and G. F. Fitzgerald. 2003. Molecular organization of exopolysaccharide (EPS) encoding genes on the lactococcal bacteriophage adsorption blocking plasmid, pCI658. Plasmid 49:130-142.
-
(2003)
Plasmid
, vol.49
, pp. 130-142
-
-
Forde, A.1
Fitzgerald, G.F.2
-
128
-
-
0026585263
-
-
Fox, G. E., J. D. Wisotzkey, and P. Jurtshuk, Jr. 1992. How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity. Int. J. Syst. Bacteriol. 42:166-170.
-
Fox, G. E., J. D. Wisotzkey, and P. Jurtshuk, Jr. 1992. How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity. Int. J. Syst. Bacteriol. 42:166-170.
-
-
-
-
129
-
-
0032860238
-
Asymmetric substitution patterns: A review of possible underlying mutational or selective mechanisms
-
Frank, A. C., and J. R. Lobry. 1999. Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms. Gene 238:65-77.
-
(1999)
Gene
, vol.238
, pp. 65-77
-
-
Frank, A.C.1
Lobry, J.R.2
-
130
-
-
0035871749
-
Localization of Tropheryma whippelii rRNA in tissues from patients with Whipple's disease
-
Fredricks, D. N., and D. A. Relman. 2001. Localization of Tropheryma whippelii rRNA in tissues from patients with Whipple's disease. J. Infect. Dis. 183:1229-1237.
-
(2001)
J. Infect. Dis
, vol.183
, pp. 1229-1237
-
-
Fredricks, D.N.1
Relman, D.A.2
-
131
-
-
0031750390
-
Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats
-
Frothingham, R., and W. A. Meeker-O'Connell. 1998. Genetic diversity in the Mycobacterium tuberculosis complex based on variable numbers of tandem DNA repeats. Microbiology 144:1189-1196.
-
(1998)
Microbiology
, vol.144
, pp. 1189-1196
-
-
Frothingham, R.1
Meeker-O'Connell, W.A.2
-
132
-
-
0036022419
-
Corynebacterium efficiens sp. nov., a glutamic-acid-producing species from soil and vegetables
-
Fudou, R., Y. Jojima, A. Seto, K. Yamada, E. Kimura, T. Nakamatsu, A. Hiraishi, and S. Yamanaka. 2002. Corynebacterium efficiens sp. nov., a glutamic-acid-producing species from soil and vegetables. Int. J. Syst. Evol. Microbiol. 52:1127-1131.
-
(2002)
Int. J. Syst. Evol. Microbiol
, vol.52
, pp. 1127-1131
-
-
Fudou, R.1
Jojima, Y.2
Seto, A.3
Yamada, K.4
Kimura, E.5
Nakamatsu, T.6
Hiraishi, A.7
Yamanaka, S.8
-
133
-
-
27144472499
-
Intragenic position of UUA codons in streptomycetes
-
Fuglsang, A. 2005. Intragenic position of UUA codons in streptomycetes. Microbiology 151:3150-3152.
-
(2005)
Microbiology
, vol.151
, pp. 3150-3152
-
-
Fuglsang, A.1
-
134
-
-
0028838550
-
Heterogeneity within human-derived Centers for Disease Control and Prevention (CDC) coryneform group ANF-1-like bacteria and description of Corynebacterium auris sp. nov
-
Funke, G., P. A. Lawson, and M. D. Collins. 1995. Heterogeneity within human-derived Centers for Disease Control and Prevention (CDC) coryneform group ANF-1-like bacteria and description of Corynebacterium auris sp. nov. Int. J. Syst. Bacteriol. 45:735-739.
-
(1995)
Int. J. Syst. Bacteriol
, vol.45
, pp. 735-739
-
-
Funke, G.1
Lawson, P.A.2
Collins, M.D.3
-
135
-
-
0031019565
-
Clinical microbiology of coryneform bacteria
-
Funke, G., A. von Graevenitz, J. E. Clarridge III, and K. A. Bernard. 1997. Clinical microbiology of coryneform bacteria. Clin. Microbiol. Rev. 10:125-159.
-
(1997)
Clin. Microbiol. Rev
, vol.10
, pp. 125-159
-
-
Funke, G.1
von Graevenitz, A.2
Clarridge III, J.E.3
Bernard, K.A.4
-
136
-
-
27844604206
-
Conserved indels in protein sequences that are characteristic of the phylum Actinobacteria
-
Gao, B., and R. S. Gupta. 2005. Conserved indels in protein sequences that are characteristic of the phylum Actinobacteria. Int. J. Syst. Evol. Microbiol. 55:2401-2412.
-
(2005)
Int. J. Syst. Evol. Microbiol
, vol.55
, pp. 2401-2412
-
-
Gao, B.1
Gupta, R.S.2
-
137
-
-
33745963185
-
Signature proteins that are distinctive characteristics of Actinobacteria and their subgroups
-
Gao, B., R. Paramanathan, and R. S. Gupta. 2006. Signature proteins that are distinctive characteristics of Actinobacteria and their subgroups. Antonie Leeuwenhoek 90:69-91.
-
(2006)
Antonie Leeuwenhoek
, vol.90
, pp. 69-91
-
-
Gao, B.1
Paramanathan, R.2
Gupta, R.S.3
-
138
-
-
33751429907
-
Expression and characterization of alpha-(1,4)-glucan branching enzyme Rv1326c of Mycobacterium tuberculosis H37Rv
-
Garg, S. K., M. S. Alam, K. V. Kishan, and P. Agrawal. 2007. Expression and characterization of alpha-(1,4)-glucan branching enzyme Rv1326c of Mycobacterium tuberculosis H37Rv. Protein Expr. Purif. 51:198-208.
-
(2007)
Protein Expr. Purif
, vol.51
, pp. 198-208
-
-
Garg, S.K.1
Alam, M.S.2
Kishan, K.V.3
Agrawal, P.4
-
139
-
-
0037596510
-
The complete genome sequence of Mycobacterium bovis
-
Garnier, T., K. Eiglmeier, J. C. Camus, N. Medina, H. Mansoor, M. Pryor, S. Duthoy, S. Grondin, C. Lacroix, C. Monsempe, S. Simon, B. Harris, R. Atkin, J. Doggett, R. Mayes, L. Keating, P. R. Wheeler, J. Parkhill, B. G. Barrell, S. T. Cole, S. V. Gordon, and R. G. Hewinson. 2003. The complete genome sequence of Mycobacterium bovis. Proc. Natl. Acad. Sci. USA 100:7877-7882.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 7877-7882
-
-
Garnier, T.1
Eiglmeier, K.2
Camus, J.C.3
Medina, N.4
Mansoor, H.5
Pryor, M.6
Duthoy, S.7
Grondin, S.8
Lacroix, C.9
Monsempe, C.10
Simon, S.11
Harris, B.12
Atkin, R.13
Doggett, J.14
Mayes, R.15
Keating, L.16
Wheeler, P.R.17
Parkhill, J.18
Barrell, B.G.19
Cole, S.T.20
Gordon, S.V.21
Hewinson, R.G.22
more..
-
140
-
-
0032774762
-
Identification, cloning, and expression of the CAMP factor gene (cfa) of group A streptococci
-
Gase, K., J. J. Ferretti, C. Primeaux, and W. M. McShan. 1999. Identification, cloning, and expression of the CAMP factor gene (cfa) of group A streptococci. Infect. Immun. 67:4725-4731.
-
(1999)
Infect. Immun
, vol.67
, pp. 4725-4731
-
-
Gase, K.1
Ferretti, J.J.2
Primeaux, C.3
McShan, W.M.4
-
141
-
-
32444439972
-
Assembly of distinct pilus structures on the surface of Corynebacterium diphtheriae
-
Gaspar, A. H., and H. Ton-That. 2006. Assembly of distinct pilus structures on the surface of Corynebacterium diphtheriae. J. Bacteriol. 188:1526-1533.
-
(2006)
J. Bacteriol
, vol.188
, pp. 1526-1533
-
-
Gaspar, A.H.1
Ton-That, H.2
-
142
-
-
0030811355
-
Isolation by genetic labeling of a new mycobacterial plasmid, pJAZ38, from Mycobacterium fortuitum
-
Gavigan, J. A., J. A. Ainsa, E. Perez, I. Otal, and C. Martin. 1997. Isolation by genetic labeling of a new mycobacterial plasmid, pJAZ38, from Mycobacterium fortuitum. J. Bacteriol. 179:4115-4122.
-
(1997)
J. Bacteriol
, vol.179
, pp. 4115-4122
-
-
Gavigan, J.A.1
Ainsa, J.A.2
Perez, E.3
Otal, I.4
Martin, C.5
-
143
-
-
15944405779
-
Amyloids - a functional coat for microorganisms
-
Gebbink, M. F., D. Claessen, B. Bouma, L. Dijkhuizen, and H. A. Wosten. 2005. Amyloids - a functional coat for microorganisms. Nat. Rev. Microbiol. 3:333-341.
-
(2005)
Nat. Rev. Microbiol
, vol.3
, pp. 333-341
-
-
Gebbink, M.F.1
Claessen, D.2
Bouma, B.3
Dijkhuizen, L.4
Wosten, H.A.5
-
144
-
-
0033524996
-
Mycolactone: A polyketide toxin from Mycobacterium ulcerans required for virulence
-
George, K. M., D. Chatterjee, G. Gunawardana, D. Welty, J. Hayman, R. Lee, and P. L. Small. 1999. Mycolactone: a polyketide toxin from Mycobacterium ulcerans required for virulence. Science 283:854-857.
-
(1999)
Science
, vol.283
, pp. 854-857
-
-
George, K.M.1
Chatterjee, D.2
Gunawardana, G.3
Welty, D.4
Hayman, J.5
Lee, R.6
Small, P.L.7
-
145
-
-
8644256668
-
Mycobacterium avium subsp. paratuberculosis strains isolated from Crohn's disease patients and animal species exhibit similar polymorphic locus patterns
-
Ghadiali, A. H., M. Strother, S. A. Naser, E. J. Manning, and S. Sreevatsan. 2004. Mycobacterium avium subsp. paratuberculosis strains isolated from Crohn's disease patients and animal species exhibit similar polymorphic locus patterns. J. Clin. Microbiol. 42:5345-5348.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 5345-5348
-
-
Ghadiali, A.H.1
Strother, M.2
Naser, S.A.3
Manning, E.J.4
Sreevatsan, S.5
-
146
-
-
0029013322
-
Dietary modulation of the human colonic microbiota: Introducing the concept of prebiotics
-
Gibson, G. R., and M. B. Roberfroid. 1995. Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics. J. Nutr. 125:1401-1412.
-
(1995)
J. Nutr
, vol.125
, pp. 1401-1412
-
-
Gibson, G.R.1
Roberfroid, M.B.2
-
147
-
-
4544371669
-
Determination of the core of a minimal bacterial gene set
-
Gil, R., F. J. Silva, J. Pereto, and A. Moya. 2004. Determination of the core of a minimal bacterial gene set. Microbiol. Mol. Biol. Rev. 68:518-537.
-
(2004)
Microbiol. Mol. Biol. Rev
, vol.68
, pp. 518-537
-
-
Gil, R.1
Silva, F.J.2
Pereto, J.3
Moya, A.4
-
148
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
Gill, S. R., M. Pop, R. T. Deboy, P. B. Eckburg, P. J. Tumbaugh, B. S. Samuel, J. I. Gordon, D. A. Relman, C. M. Fraser-Liggett, and K. E. Nelson. 2006. Metagenomic analysis of the human distal gut microbiome. Science 312:1355-1359.
-
(2006)
Science
, vol.312
, pp. 1355-1359
-
-
Gill, S.R.1
Pop, M.2
Deboy, R.T.3
Eckburg, P.B.4
Tumbaugh, P.J.5
Samuel, B.S.6
Gordon, J.I.7
Relman, D.A.8
Fraser-Liggett, C.M.9
Nelson, K.E.10
-
149
-
-
0031803670
-
Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays
-
Gingeras, T. R., G. Ghandour, E. Wang, A. Berno, P. M. Small, F. Drobniewski, D. Alland, E. Desmond, M. Holodniy, and J. Drenkow. 1998. Simultaneous genotyping and species identification using hybridization pattern recognition analysis of generic Mycobacterium DNA arrays. Genome Res. 8:435-448.
-
(1998)
Genome Res
, vol.8
, pp. 435-448
-
-
Gingeras, T.R.1
Ghandour, G.2
Wang, E.3
Berno, A.4
Small, P.M.5
Drobniewski, F.6
Alland, D.7
Desmond, E.8
Holodniy, M.9
Drenkow, J.10
-
150
-
-
0035923621
-
Helicobacter pylori arginase inhibits nitric oxide production by eukaryotic cells: A strategy for bacterial survival
-
Gobert, A. P., D. J. McGee, M. Akhtar, G. L. Mendz, J. C. Newton, Y. Cheng, H. L. Mobley, and K. T. Wilson. 2001. Helicobacter pylori arginase inhibits nitric oxide production by eukaryotic cells: a strategy for bacterial survival. Proc. Natl. Acad. Sci. USA 98:13844-13849.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 13844-13849
-
-
Gobert, A.P.1
McGee, D.J.2
Akhtar, M.3
Mendz, G.L.4
Newton, J.C.5
Cheng, Y.6
Mobley, H.L.7
Wilson, K.T.8
-
153
-
-
0032899321
-
New insertion sequences and a novel repeated sequence in the genome of Mycobacterium tuberculosis H37Rv
-
Gordon, S. V., B. Heym, J. Parkhill, B. Barrell, and S. T. Cole. 1999. New insertion sequences and a novel repeated sequence in the genome of Mycobacterium tuberculosis H37Rv. Microbiology 145:881-892.
-
(1999)
Microbiology
, vol.145
, pp. 881-892
-
-
Gordon, S.V.1
Heym, B.2
Parkhill, J.3
Barrell, B.4
Cole, S.T.5
-
154
-
-
0027956785
-
The 387 kb linear plasmid pPZG101 of Streptomyces rimosus and its interactions with the chromosome
-
Gravius, B., D. Glocker, J. Pigac, K. Pandza, D. Hranueli, and J. Cullum. 1994. The 387 kb linear plasmid pPZG101 of Streptomyces rimosus and its interactions with the chromosome. Microbiology 140:2271-2277.
-
(1994)
Microbiology
, vol.140
, pp. 2271-2277
-
-
Gravius, B.1
Glocker, D.2
Pigac, J.3
Pandza, K.4
Hranueli, D.5
Cullum, J.6
-
155
-
-
0027165744
-
Interaction of Propionibacterium acnes with skin lipids in vitro
-
Gribbon, E. M., W. J. Cunliffe, and K. T. Holland. 1993. Interaction of Propionibacterium acnes with skin lipids in vitro. J. Gen. Microbiol. 139: 1745-1751.
-
(1993)
J. Gen. Microbiol
, vol.139
, pp. 1745-1751
-
-
Gribbon, E.M.1
Cunliffe, W.J.2
Holland, K.T.3
-
156
-
-
0028000094
-
The microaerophily and photosensitivity of Propionibacterium acnes
-
Gribbon, E. M., J. G. Shoesmith, W. J. Cunliffe, and K. T. Holland. 1994. The microaerophily and photosensitivity of Propionibacterium acnes. J. Appl. Bacteriol. 77:583-590.
-
(1994)
J. Appl. Bacteriol
, vol.77
, pp. 583-590
-
-
Gribbon, E.M.1
Shoesmith, J.G.2
Cunliffe, W.J.3
Holland, K.T.4
-
157
-
-
2342604469
-
Distinctive protein signatures provide molecular markers and evidence for the monophyletic nature of the Deinococcus-Thermus phylum
-
Griffiths, E., and R. S. Gupta. 2004. Distinctive protein signatures provide molecular markers and evidence for the monophyletic nature of the Deinococcus-Thermus phylum. J. Bacteriol. 186:3097-3107.
-
(2004)
J. Bacteriol
, vol.186
, pp. 3097-3107
-
-
Griffiths, E.1
Gupta, R.S.2
-
158
-
-
33746433456
-
Lateral transfers of serine hydroxymethyltransferase (glyA) and UDP-N-acetylglucosamine enolpyruvyl transferase (murA) genes from free-living Actinobacteria to the parasitic chlamydiae
-
Griffiths, E., and R. S. Gupta. 2006. Lateral transfers of serine hydroxymethyltransferase (glyA) and UDP-N-acetylglucosamine enolpyruvyl transferase (murA) genes from free-living Actinobacteria to the parasitic chlamydiae. J. Mol. Evol 63:283-296.
-
(2006)
J. Mol. Evol
, vol.63
, pp. 283-296
-
-
Griffiths, E.1
Gupta, R.S.2
-
159
-
-
0032524384
-
Analyzing genomes with cumulative skew diagrams
-
Grigoriev, A. 1998. Analyzing genomes with cumulative skew diagrams. Nucleic Acids Res. 26:2286-2290.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 2286-2290
-
-
Grigoriev, A.1
-
160
-
-
0033858110
-
From complete genomes to measures of substitution rate variability within and between proteins
-
Grishin, N. V., Y. I. Wolf, and E. V. Koonin. 2000. From complete genomes to measures of substitution rate variability within and between proteins. Genome Res. 10:991-1000.
-
(2000)
Genome Res
, vol.10
, pp. 991-1000
-
-
Grishin, N.V.1
Wolf, Y.I.2
Koonin, E.V.3
-
161
-
-
0037425743
-
Gut flora in health and disease
-
Guarner, F., and J. R. Malagelada. 2003. Gut flora in health and disease. Lancet 361:512-519.
-
(2003)
Lancet
, vol.361
, pp. 512-519
-
-
Guarner, F.1
Malagelada, J.R.2
-
162
-
-
33947257567
-
Molecular characterization of Bifidobacterium longum biovar longum NAL8 plasmids and construction of a novel replicon screening system
-
Guglielmetti, S., M. Karp, D. Mora, I. Tamagnini, and C. Parini. 2007. Molecular characterization of Bifidobacterium longum biovar longum NAL8 plasmids and construction of a novel replicon screening system. Appl. Microbiol. Biotechnol. 74:1053-1061.
-
(2007)
Appl. Microbiol. Biotechnol
, vol.74
, pp. 1053-1061
-
-
Guglielmetti, S.1
Karp, M.2
Mora, D.3
Tamagnini, I.4
Parini, C.5
-
163
-
-
2542465712
-
The phylogeny and signature sequences characteristics of Fibrobacteres, Chlorobi, and Bacteroidetes
-
Gupta, R. S. 2004. The phylogeny and signature sequences characteristics of Fibrobacteres, Chlorobi, and Bacteroidetes. Crit. Rev. Microbiol. 30:123-143.
-
(2004)
Crit. Rev. Microbiol
, vol.30
, pp. 123-143
-
-
Gupta, R.S.1
-
164
-
-
0033823160
-
The phylogeny of proteobacteria: Relationships to other eubacterial phyla and eukaryotes
-
Gupta, R. S. 2000. The phylogeny of proteobacteria: relationships to other eubacterial phyla and eukaryotes. FEMS Microbiol. Rev. 24:367-402.
-
(2000)
FEMS Microbiol. Rev
, vol.24
, pp. 367-402
-
-
Gupta, R.S.1
-
165
-
-
0031794743
-
Protein phylogenies and signature sequences: A reappraisal of evolutionary relationships among archaebacteria, eubacteria, and eukaryotes
-
Gupta, R. S. 1998. Protein phylogenies and signature sequences: a reappraisal of evolutionary relationships among archaebacteria, eubacteria, and eukaryotes. Microbiol. Mol. Biol. Rev. 62:1435-1491.
-
(1998)
Microbiol. Mol. Biol. Rev
, vol.62
, pp. 1435-1491
-
-
Gupta, R.S.1
-
166
-
-
0344034192
-
Molecular signatures in protein sequences that are characteristic of cyanobacteria and plastid homologues
-
Gupta, R. S., M. Pereira, C. Chandrasekera, and V. Johari. 2003. Molecular signatures in protein sequences that are characteristic of cyanobacteria and plastid homologues. Int. J. Syst. Evol. Microbiol. 53:1833-1842.
-
(2003)
Int. J. Syst. Evol. Microbiol
, vol.53
, pp. 1833-1842
-
-
Gupta, R.S.1
Pereira, M.2
Chandrasekera, C.3
Johari, V.4
-
167
-
-
77951051763
-
Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis
-
Gutierrez, M. C., S. Brisse, R. Brosch, M. Fabre, B. Omais, M. Marmiesse, P. Supply, and V. Vincent. 2005. Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis. PLoS Pathog. 1:e5.
-
(2005)
PLoS Pathog
, vol.1
-
-
Gutierrez, M.C.1
Brisse, S.2
Brosch, R.3
Fabre, M.4
Omais, B.5
Marmiesse, M.6
Supply, P.7
Vincent, V.8
-
168
-
-
0034051194
-
The pathology of diphtheria
-
Hadfield, T. L., P. McEvoy, Y. Polotsky, V. A. Tzinserling, and A. A. Yakovlev. 2000. The pathology of diphtheria. J. Infect. Dis. 181(Suppl. 1):S116-S120.
-
(2000)
J. Infect. Dis
, vol.181
, Issue.SUPPL. 1
-
-
Hadfield, T.L.1
McEvoy, P.2
Polotsky, Y.3
Tzinserling, V.A.4
Yakovlev, A.A.5
-
169
-
-
0036956104
-
Expression of the mceA, esat-6 and hspX genes in Mycobacterium tuberculosis and their responses to aerobic conditions and to restricted oxygen supply
-
Haile, Y., G. Bjune, and H. G. Wiker. 2002. Expression of the mceA, esat-6 and hspX genes in Mycobacterium tuberculosis and their responses to aerobic conditions and to restricted oxygen supply. Microbiology 148:3881-3886.
-
(2002)
Microbiology
, vol.148
, pp. 3881-3886
-
-
Haile, Y.1
Bjune, G.2
Wiker, H.G.3
-
170
-
-
3843146171
-
Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy
-
Hansmeier, N., F. W. Bartels, R. Ros, D. Anselmetti, A. Tauch, A. Puhler, and J. Kalinowski. 2004. Classification of hyper-variable Corynebacterium glutamicum surface-layer proteins by sequence analyses and atomic force microscopy. J. Biotechnol. 112:177-193.
-
(2004)
J. Biotechnol
, vol.112
, pp. 177-193
-
-
Hansmeier, N.1
Bartels, F.W.2
Ros, R.3
Anselmetti, D.4
Tauch, A.5
Puhler, A.6
Kalinowski, J.7
-
171
-
-
0035542816
-
Crohn's disease and Mycobacterium avium subsp. paratuberculosis: Current issues
-
Harris, J. E., and A. M. Lammerding. 2001. Crohn's disease and Mycobacterium avium subsp. paratuberculosis: current issues. J. Food Prot. 64:2103-2110.
-
(2001)
J. Food Prot
, vol.64
, pp. 2103-2110
-
-
Harris, J.E.1
Lammerding, A.M.2
-
172
-
-
0027456546
-
DNA sequence, structure and gene expression of mycobacteriophage L5: A phage system for mycobacterial genetics
-
Hatfull, G. F., and G. J. Sarkis. 1993. DNA sequence, structure and gene expression of mycobacteriophage L5: a phage system for mycobacterial genetics. Mol. Microbiol. 7:395-405.
-
(1993)
Mol. Microbiol
, vol.7
, pp. 395-405
-
-
Hatfull, G.F.1
Sarkis, G.J.2
-
173
-
-
0345269957
-
Streptomyces coelicolor A3(2) plasmid SCP2*: Deductions from the complete sequence
-
Haug, I., A. Weissenborn, D. Brolle, S. Bentley, T. Kieser, and J. Altenbuchner. 2003. Streptomyces coelicolor A3(2) plasmid SCP2*: deductions from the complete sequence. Microbiology 149:505-513.
-
(2003)
Microbiology
, vol.149
, pp. 505-513
-
-
Haug, I.1
Weissenborn, A.2
Brolle, D.3
Bentley, S.4
Kieser, T.5
Altenbuchner, J.6
-
174
-
-
0026333344
-
Postulated epidemiology of Mycobacterium ulcerans infection
-
Hayman, J. 1991. Postulated epidemiology of Mycobacterium ulcerans infection. Int. J. Epidemiol. 20:1093-1098.
-
(1991)
Int. J. Epidemiol
, vol.20
, pp. 1093-1098
-
-
Hayman, J.1
-
175
-
-
0033514996
-
Evolutionary relationships among diverse bacteriophages and prophages: All the world's a phage
-
Hendrix, R. W., M. C. Smith, R. N. Burns, M. E. Ford, and G. F. Hatfull. 1999. Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage. Proc. Natl. Acad. Sci. USA 96:2192-2197.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 2192-2197
-
-
Hendrix, R.W.1
Smith, M.C.2
Burns, R.N.3
Ford, M.E.4
Hatfull, G.F.5
-
176
-
-
25144473166
-
Bifidobacterium longum endogalactanase liberates galactotriose from type I galactans
-
Hinz, S. W., M. I. Pastink, L. A. van den Broek, J. P. Vincken, and A. G. Voragen. 2005. Bifidobacterium longum endogalactanase liberates galactotriose from type I galactans. Appl. Environ. Microbiol. 71:5501-5510.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 5501-5510
-
-
Hinz, S.W.1
Pastink, M.I.2
van den Broek, L.A.3
Vincken, J.P.4
Voragen, A.G.5
-
177
-
-
0035258448
-
Improvement of desulfurization activity in Rhodococcus erythropolis KA2-5-1 by genetic engineering
-
Hirasawa, K., Y. Ishii, M. Kobayashi, K. Koizumi, and K. Maruhashi. 2001. Improvement of desulfurization activity in Rhodococcus erythropolis KA2-5-1 by genetic engineering. Biosci. Biotechnol. Biochem. 65:239-246.
-
(2001)
Biosci. Biotechnol. Biochem
, vol.65
, pp. 239-246
-
-
Hirasawa, K.1
Ishii, Y.2
Kobayashi, M.3
Koizumi, K.4
Maruhashi, K.5
-
178
-
-
1842788227
-
Stable association between strains of Mycobacterium tuberculosis and their human host populations
-
Hirsh, A. E., A. G. Tsolaki, K. DeRiemer, M. W. Feldman, and P. M. Small. 2004. Stable association between strains of Mycobacterium tuberculosis and their human host populations. Proc. Natl. Acad. Sci. USA 101:4871-4876.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 4871-4876
-
-
Hirsh, A.E.1
Tsolaki, A.G.2
DeRiemer, K.3
Feldman, M.W.4
Small, P.M.5
-
179
-
-
0005188295
-
Comparison of Mycobacterium tuberculosis genomes reveals frequent deletions in a 20 kb variable region in clinical isolates
-
Ho, T. B., B. D. Robertson, G. M. Taylor, R. J. Shaw, and D. B. Young. 2000. Comparison of Mycobacterium tuberculosis genomes reveals frequent deletions in a 20 kb variable region in clinical isolates. Yeast 17:272-282.
-
(2000)
Yeast
, vol.17
, pp. 272-282
-
-
Ho, T.B.1
Robertson, B.D.2
Taylor, G.M.3
Shaw, R.J.4
Young, D.B.5
-
180
-
-
0031950791
-
Propionibacterium acnes and acne
-
Holland, K. T., O. Aldana, R. A. Bojar, W. J. Cunliffe, E. A. Eady, D. B. Holland, E. Ingham, C. McGeown, A. Till, and C. Walters. 1998. Propionibacterium acnes and acne. Dermatology 196:67-68.
-
(1998)
Dermatology
, vol.196
, pp. 67-68
-
-
Holland, K.T.1
Aldana, O.2
Bojar, R.A.3
Cunliffe, W.J.4
Eady, E.A.5
Holland, D.B.6
Ingham, E.7
McGeown, C.8
Till, A.9
Walters, C.10
-
181
-
-
0034107745
-
Biology and molecular epidemiology of diphtheria toxin and the tox gene
-
Holmes, R. K. 2000. Biology and molecular epidemiology of diphtheria toxin and the tox gene. J. Infect. Dis. 181(Suppl. 1):S156-S167.
-
(2000)
J. Infect. Dis
, vol.181
, Issue.SUPPL. 1
-
-
Holmes, R.K.1
-
182
-
-
0141456185
-
Characterization of the Streptomyces coelicolor A3(2) wblE gene, encoding a homologue of the sporulation transcription factor
-
Homerova, D., J. Sevcikova, and J. Kormanec. 2003. Characterization of the Streptomyces coelicolor A3(2) wblE gene, encoding a homologue of the sporulation transcription factor. Folia Microbiol. (Praha) 48:489-495.
-
(2003)
Folia Microbiol. (Praha)
, vol.48
, pp. 489-495
-
-
Homerova, D.1
Sevcikova, J.2
Kormanec, J.3
-
183
-
-
4043070854
-
Phylogenetic analysis based on genome-scale metabolic pathway reaction content
-
Hong, S. H., T. Y. Kim, and S. Y. Lee. 2004. Phylogenetic analysis based on genome-scale metabolic pathway reaction content. Appl. Microbiol. Biotechnol. 65:203-210.
-
(2004)
Appl. Microbiol. Biotechnol
, vol.65
, pp. 203-210
-
-
Hong, S.H.1
Kim, T.Y.2
Lee, S.Y.3
-
184
-
-
7444253428
-
Systems biology and new technologies enable predictive and preventative medicine
-
Hood, L., J. R. Heath, M. E. Phelps, and B. Lin. 2004. Systems biology and new technologies enable predictive and preventative medicine. Science 306:640-643.
-
(2004)
Science
, vol.306
, pp. 640-643
-
-
Hood, L.1
Heath, J.R.2
Phelps, M.E.3
Lin, B.4
-
185
-
-
33845653671
-
Soil to genomics: The Streptomyces chromosome
-
Hopwood, D. A. 2006. Soil to genomics: the Streptomyces chromosome. Annu. Rev. Genet. 40:1-23.
-
(2006)
Annu. Rev. Genet
, vol.40
, pp. 1-23
-
-
Hopwood, D.A.1
-
187
-
-
0021917190
-
Mucin degradation in human colon ecosystems. Isolation and properties of fecal strains that degrade ABH blood group antigens and oligosaccharides from mucin glycoproteins
-
Hoskins, L. C., M. Agustines, W. B. McKee, E. T. Boulding, M. Kriaris, and G. Niedermeyer. 1985. Mucin degradation in human colon ecosystems. Isolation and properties of fecal strains that degrade ABH blood group antigens and oligosaccharides from mucin glycoproteins. J. Clin. Investig. 75:944-953.
-
(1985)
J. Clin. Investig
, vol.75
, pp. 944-953
-
-
Hoskins, L.C.1
Agustines, M.2
McKee, W.B.3
Boulding, E.T.4
Kriaris, M.5
Niedermeyer, G.6
-
188
-
-
33744967088
-
Novel genetic polymorphisms that further delineate the phylogeny of the Mycobacterium tuberculosis complex
-
Huard, R. C., M. Fabre, P. de Haas, L. C. Lazzarini, D. van Soolingen, D. Cousins, and J. L. Ho. 2006. Novel genetic polymorphisms that further delineate the phylogeny of the Mycobacterium tuberculosis complex. J. Bacteriol. 188:4271-4287.
-
(2006)
J. Bacteriol
, vol.188
, pp. 4271-4287
-
-
Huard, R.C.1
Fabre, M.2
de Haas, P.3
Lazzarini, L.C.4
van Soolingen, D.5
Cousins, D.6
Ho, J.L.7
-
189
-
-
0029165823
-
Nocardia species as an etiologic agent in Parkinson's disease: Serological testing in a case-control study
-
Hubble, J. P., T. Cao, J. A. Kjelstrom, W. C. Koller, and B. L. Beaman. 1995. Nocardia species as an etiologic agent in Parkinson's disease: serological testing in a case-control study. J. Clin. Microbiol. 33:2768-2769.
-
(1995)
J. Clin. Microbiol
, vol.33
, pp. 2768-2769
-
-
Hubble, J.P.1
Cao, T.2
Kjelstrom, J.A.3
Koller, W.C.4
Beaman, B.L.5
-
190
-
-
0034020751
-
The sulfur-regulated arylsulfatase gene cluster of Pseudomonas aeruginosa, a new member of the cys regulon
-
Hummerjohann, J., S. Laudenbach, J. Retey, T. Leisinger, and M. A. Kertesz. 2000. The sulfur-regulated arylsulfatase gene cluster of Pseudomonas aeruginosa, a new member of the cys regulon. J. Bacteriol. 182:2055-2058.
-
(2000)
J. Bacteriol
, vol.182
, pp. 2055-2058
-
-
Hummerjohann, J.1
Laudenbach, S.2
Retey, J.3
Leisinger, T.4
Kertesz, M.A.5
-
191
-
-
4544229161
-
Phylogenetic trees based on gene content
-
Huson, D. H., and M. Steel. 2004. Phylogenetic trees based on gene content. Bioinformatics 20:2044-2049.
-
(2004)
Bioinformatics
, vol.20
, pp. 2044-2049
-
-
Huson, D.H.1
Steel, M.2
-
192
-
-
4844230017
-
Sensing and responding to diverse extracellular signals? Analysis of the sensor kinases and response regulators of Streptomyces coelicor A3(2)
-
Hutchings, M., P. A. Hoskisson, G. Chandra, and M. J. Buttner. 2004. Sensing and responding to diverse extracellular signals? Analysis of the sensor kinases and response regulators of Streptomyces coelicor A3(2). Microbiology 150:2795-2806.
-
(2004)
Microbiology
, vol.150
, pp. 2795-2806
-
-
Hutchings, M.1
Hoskisson, P.A.2
Chandra, G.3
Buttner, M.J.4
-
193
-
-
0028842448
-
Propionibacterium acnes endocarditis
-
Huynh, T. T., A. D. Walling, M. A. Miller, T. K. Leung, Y. Leclerc, and L. Dragtakis. 1995. Propionibacterium acnes endocarditis. Can. J. Cardiol. 11:785-787.
-
(1995)
Can. J. Cardiol
, vol.11
, pp. 785-787
-
-
Huynh, T.T.1
Walling, A.D.2
Miller, M.A.3
Leung, T.K.4
Leclerc, Y.5
Dragtakis, L.6
-
194
-
-
0038561132
-
Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis
-
Ikeda, H., J. Ishikawa, A. Hanamoto, M. Shinose, H. Kikuchi, T. Shiba, Y. Sakaki, M. Hattori, and S. Omura. 2003. Complete genome sequence and comparative analysis of the industrial microorganism Streptomyces avermitilis. Nat. Biotechnol. 21:526-531.
-
(2003)
Nat. Biotechnol
, vol.21
, pp. 526-531
-
-
Ikeda, H.1
Ishikawa, J.2
Hanamoto, A.3
Shinose, M.4
Kikuchi, H.5
Shiba, T.6
Sakaki, Y.7
Hattori, M.8
Omura, S.9
-
195
-
-
0042162924
-
The Corynebacterium glutamicum genome: Features and impacts on biotechnological processes
-
Ikeda, M., and S. Nakagawa. 2003. The Corynebacterium glutamicum genome: features and impacts on biotechnological processes. Appl. Microbiol. Biotechnol. 62:99-109.
-
(2003)
Appl. Microbiol. Biotechnol
, vol.62
, pp. 99-109
-
-
Ikeda, M.1
Nakagawa, S.2
-
196
-
-
0027489151
-
Multiple novel promoters from the early region in the Streptomyces temperate phage phi C31 are activated during lytic development
-
Ingham, C. J., H. J. Crombie, C. J. Bruton, K. F. Chater, N. M. Hartley, G. J. Murphy, and M. C. Smith. 1993. Multiple novel promoters from the early region in the Streptomyces temperate phage phi C31 are activated during lytic development. Mol. Microbiol. 9:1267-1274.
-
(1993)
Mol. Microbiol
, vol.9
, pp. 1267-1274
-
-
Ingham, C.J.1
Crombie, H.J.2
Bruton, C.J.3
Chater, K.F.4
Hartley, N.M.5
Murphy, G.J.6
Smith, M.C.7
-
197
-
-
0032866640
-
The immunology of Propionibacterium acnes and acne
-
Ingham, E. 1999. The immunology of Propionibacterium acnes and acne. Curr. Opin. Infect. Dis. 12:191-197.
-
(1999)
Curr. Opin. Infect. Dis
, vol.12
, pp. 191-197
-
-
Ingham, E.1
-
198
-
-
6944252215
-
The complete genomic sequence of Nocardia farcinica IFM 10152
-
Ishikawa, J., A. Yamashita, Y. Mikami, Y. Hoshino, H. Kurita, K. Hotta, T. Shiba, and M. Hattori. 2004. The complete genomic sequence of Nocardia farcinica IFM 10152. Proc. Natl. Acad. Sci. USA 101:14925-14930.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 14925-14930
-
-
Ishikawa, J.1
Yamashita, A.2
Mikami, Y.3
Hoshino, Y.4
Kurita, H.5
Hotta, K.6
Shiba, T.7
Hattori, M.8
-
199
-
-
33745217596
-
A serpin from the gut bacterium Bifidobacterium longum inhibits eukaryotic elastase-like serine proteases
-
Ivanov, D., C. Emonet, F. Foata, M. Affolter, M. Delley, M. Fisseha, S. Blum-Sperisen, S. Kochhar, and F. Arigoni. 2006. A serpin from the gut bacterium Bifidobacterium longum inhibits eukaryotic elastase-like serine proteases. J. Biol. Chem. 281:17246-17252.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 17246-17252
-
-
Ivanov, D.1
Emonet, C.2
Foata, F.3
Affolter, M.4
Delley, M.5
Fisseha, M.6
Blum-Sperisen, S.7
Kochhar, S.8
Arigoni, F.9
-
200
-
-
0023109620
-
Classification of corynebacteria associated with endocarditis (group JK) as Corynebacterium jeikeium sp. nov
-
Jackman, P. J. H., D. G. Pitcher, S. Pelczynska, and P. Borman. 1987. Classification of corynebacteria associated with endocarditis (group JK) as Corynebacterium jeikeium sp. nov. Syst. Appl. Microbiol. 9:83-90.
-
(1987)
Syst. Appl. Microbiol
, vol.9
, pp. 83-90
-
-
Jackman, P.J.H.1
Pitcher, D.G.2
Pelczynska, S.3
Borman, P.4
-
202
-
-
0034045514
-
The endo-beta-1,4-glucanase CelA of Clavibacter michiganensis subsp. michiganensis is a pathogenicity determinant required for induction of bacterial wilt of tomato
-
Jahr, H., J. Dreier, D. Meletzus, R. Bahro, and R. Eichenlaub. 2000. The endo-beta-1,4-glucanase CelA of Clavibacter michiganensis subsp. michiganensis is a pathogenicity determinant required for induction of bacterial wilt of tomato. Mol. Plant-Microbe Interact. 13:703-714.
-
(2000)
Mol. Plant-Microbe Interact
, vol.13
, pp. 703-714
-
-
Jahr, H.1
Dreier, J.2
Meletzus, D.3
Bahro, R.4
Eichenlaub, R.5
-
203
-
-
6744237460
-
Severe infections caused by Propionibacterium acnes: An underestimated pathogen in late postoperative infections
-
Jakab, E., R. Zbinden, J. Gubler, C. Ruef, A. von Graevenitz, and M. Krause. 1996. Severe infections caused by Propionibacterium acnes: an underestimated pathogen in late postoperative infections. Yale J. Biol. Med. 69:477-482.
-
(1996)
Yale J. Biol. Med
, vol.69
, pp. 477-482
-
-
Jakab, E.1
Zbinden, R.2
Gubler, J.3
Ruef, C.4
von Graevenitz, A.5
Krause, M.6
-
204
-
-
14844290234
-
Evidence that the Streptomyces developmental protein WhiD, a member of the WhiB family, binds a [4Fe-4S] cluster
-
Jakimowicz, P., M. R. Cheesman, W. R. Bishai, K. F. Chater, A. J. Thomson, and M. J. Buttner. 2005. Evidence that the Streptomyces developmental protein WhiD, a member of the WhiB family, binds a [4Fe-4S] cluster. J. Biol. Chem. 280:8309-8315.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 8309-8315
-
-
Jakimowicz, P.1
Cheesman, M.R.2
Bishai, W.R.3
Chater, K.F.4
Thomson, A.J.5
Buttner, M.J.6
-
205
-
-
0034916351
-
Out of the iron age: New insights into the critical role of manganese homeostasis in bacteria
-
2001
-
Jakubovics, N. S., and H. F. Jenkinson. 2001. Out of the iron age: new insights into the critical role of manganese homeostasis in bacteria. Microbiology 147:1709-1718.
-
(1709)
Microbiology
, vol.147
-
-
Jakubovics, N.S.1
Jenkinson, H.F.2
-
206
-
-
0029865398
-
Analysis of nucleotide methylation in DNA from Corynebacterium glutamicum and related species
-
Jang, K. H., P. J. Chambers, and M. L. Britz. 1996. Analysis of nucleotide methylation in DNA from Corynebacterium glutamicum and related species. FEMS Microbiol. Lett. 136:309-315.
-
(1996)
FEMS Microbiol. Lett
, vol.136
, pp. 309-315
-
-
Jang, K.H.1
Chambers, P.J.2
Britz, M.L.3
-
207
-
-
0036267740
-
Identification of genes that are associated with DNA repeats in prokaryotes
-
Jansen, R., J. D. Embden, W. Gaastra, and L. M. Schouls. 2002. Identification of genes that are associated with DNA repeats in prokaryotes. Mol. Microbiol. 43:1565-1575.
-
(2002)
Mol. Microbiol
, vol.43
, pp. 1565-1575
-
-
Jansen, R.1
Embden, J.D.2
Gaastra, W.3
Schouls, L.M.4
-
208
-
-
0036250036
-
Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia
-
Janssen, P. H., P. S. Yates, B. E. Grinton, P. M. Taylor, and M. Sait. 2002. Improved culturability of soil bacteria and isolation in pure culture of novel members of the divisions Acidobacteria, Actinobacteria, Proteobacteria, and Verrucomicrobia. Appl. Environ. Microbiol. 68:2391-2396.
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 2391-2396
-
-
Janssen, P.H.1
Yates, P.S.2
Grinton, B.E.3
Taylor, P.M.4
Sait, M.5
-
209
-
-
0036204916
-
Propionibacterium acnes and inflammation in acne; P. acnes has T-cell mitogenic activity
-
Jappe, U., E. Ingham, J. Henwood, and K. T. Holland. 2002. Propionibacterium acnes and inflammation in acne; P. acnes has T-cell mitogenic activity. Br. J. Dermatol. 146:202-209.
-
(2002)
Br. J. Dermatol
, vol.146
, pp. 202-209
-
-
Jappe, U.1
Ingham, E.2
Henwood, J.3
Holland, K.T.4
-
210
-
-
0034807791
-
New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences
-
Jian, W., L. Zhu, and X. Dong. 2001. New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences. Int. J. Syst. Evol. Microbiol. 51:1633-1638.
-
(2001)
Int. J. Syst. Evol. Microbiol
, vol.51
, pp. 1633-1638
-
-
Jian, W.1
Zhu, L.2
Dong, X.3
-
211
-
-
0035143689
-
Efficient transformation system for Propionibacterium freudenreichii based on a novel vector
-
Jore, J. P., N. van Luijk, R. G. Luiten, M. J. van der Werf, and P. H. Pouwels. 2001. Efficient transformation system for Propionibacterium freudenreichii based on a novel vector. Appl. Environ. Microbiol. 67:499-503.
-
(2001)
Appl. Environ. Microbiol
, vol.67
, pp. 499-503
-
-
Jore, J.P.1
van Luijk, N.2
Luiten, R.G.3
van der Werf, M.J.4
Pouwels, P.H.5
-
212
-
-
0242353962
-
Tylosin resistance in Arcanobacterium pyogenes is encoded by an erm X determinant
-
Jost, B. H., A. C. Field, H. T. Trinh, J. G. Songer, and S. J. Billington. 2003. Tylosin resistance in Arcanobacterium pyogenes is encoded by an erm X determinant. Antimicrob. Agents Chemother. 47:3519-3524.
-
(2003)
Antimicrob. Agents Chemother
, vol.47
, pp. 3519-3524
-
-
Jost, B.H.1
Field, A.C.2
Trinh, H.T.3
Songer, J.G.4
Billington, S.J.5
-
214
-
-
12444259324
-
-
Kalinowski, J., B. Bathe, D. Bartels, N. Bischoff, M. Bott, A. Burkovski, N. Dusch, L. Eggeling, B. J. Eikmanns, L. Gaigalat, A. Goesmann, M. Hartmann, K. Huthmacher, R. Kramer, B. Linke, A. C. McHardy, F. Meyer, B. Mockel, W. Pfefferle, A. Puhler, D. A. Rey, C. Ruckert, O. Rupp, H. Sahm, V. F. Wendisch, I. Wiegrabe, and A. Tauch. 2003. The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. J. Biotechnol. 104:5-25.
-
Kalinowski, J., B. Bathe, D. Bartels, N. Bischoff, M. Bott, A. Burkovski, N. Dusch, L. Eggeling, B. J. Eikmanns, L. Gaigalat, A. Goesmann, M. Hartmann, K. Huthmacher, R. Kramer, B. Linke, A. C. McHardy, F. Meyer, B. Mockel, W. Pfefferle, A. Puhler, D. A. Rey, C. Ruckert, O. Rupp, H. Sahm, V. F. Wendisch, I. Wiegrabe, and A. Tauch. 2003. The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins. J. Biotechnol. 104:5-25.
-
-
-
-
215
-
-
0025802142
-
Genetic and biochemical analysis of the aspartokinase from Corynebacterium glutamicum
-
Kalinowski, J., J. Cremer, B. Bachmann, L. Eggeling, H. Sahm, and A. Puhler. 1991. Genetic and biochemical analysis of the aspartokinase from Corynebacterium glutamicum. Mol. Microbiol. 5:1197-1204.
-
(1991)
Mol. Microbiol
, vol.5
, pp. 1197-1204
-
-
Kalinowski, J.1
Cremer, J.2
Bachmann, B.3
Eggeling, L.4
Sahm, H.5
Puhler, A.6
-
216
-
-
0031781086
-
The terminal structures of linear plasmids from Rhodococcus opacus
-
Kalkus, J., R. Menne, M. Reh, and H. G. Schlegel. 1998. The terminal structures of linear plasmids from Rhodococcus opacus. Microbiology 144: 1271-1279.
-
(1998)
Microbiology
, vol.144
, pp. 1271-1279
-
-
Kalkus, J.1
Menne, R.2
Reh, M.3
Schlegel, H.G.4
-
217
-
-
0033986599
-
Differentiation of phylogenetically related slowly growing mycobacteria by their gyrB sequences
-
Kasai, H., T. Ezaki, and S. Harayama. 2000. Differentiation of phylogenetically related slowly growing mycobacteria by their gyrB sequences. J. Clin. Microbiol. 38:301-308.
-
(2000)
J. Clin. Microbiol
, vol.38
, pp. 301-308
-
-
Kasai, H.1
Ezaki, T.2
Harayama, S.3
-
218
-
-
3242780110
-
Molecular cloning and characterization of Bifidobacterium bifidum 1,2-alpha-L-fucosidase (AfcA), a novel inverting glycosidase (glycoside hydrolase family 95)
-
Katayama, T., A. Sakuma, T. Kimura, Y. Makimura, J. Hiratake, K. Sakata, T. Yamanoi, H. Kumagai, and K. Yamamoto. 2004. Molecular cloning and characterization of Bifidobacterium bifidum 1,2-alpha-L-fucosidase (AfcA), a novel inverting glycosidase (glycoside hydrolase family 95). J. Bacteriol. 186:4885-4893.
-
(2004)
J. Bacteriol
, vol.186
, pp. 4885-4893
-
-
Katayama, T.1
Sakuma, A.2
Kimura, T.3
Makimura, Y.4
Hiratake, J.5
Sakata, K.6
Yamanoi, T.7
Kumagai, H.8
Yamamoto, K.9
-
219
-
-
0035089867
-
The nature and consequence of genetic variability within Mycobacterium tuberculosis
-
Kato-Maeda, M., P. J. Bifani, B. N. Kreiswirth, and P. M. Small. 2001. The nature and consequence of genetic variability within Mycobacterium tuberculosis. J. Clin. Investig. 107:533-537.
-
(2001)
J. Clin. Investig
, vol.107
, pp. 533-537
-
-
Kato-Maeda, M.1
Bifani, P.J.2
Kreiswirth, B.N.3
Small, P.M.4
-
220
-
-
0031410278
-
The five "classical" plant hormones
-
Kende, H., and J. Zeevaart. 1997. The five "classical" plant hormones. Plant Cell 9:1197-1210.
-
(1997)
Plant Cell
, vol.9
, pp. 1197-1210
-
-
Kende, H.1
Zeevaart, J.2
-
221
-
-
0021689290
-
Plasmid-associated bacteriocin production in a JK-type coryneform bacterium
-
Kerry-Williams, S. M., and W. C. Noble. 1984. Plasmid-associated bacteriocin production in a JK-type coryneform bacterium. FEMS Microbiol. Lett. 25:179-182.
-
(1984)
FEMS Microbiol. Lett
, vol.25
, pp. 179-182
-
-
Kerry-Williams, S.M.1
Noble, W.C.2
-
222
-
-
0023035966
-
Plasmids in group JK coryneform bacteria isolated in a single hospital
-
Kerry-Williams, S. M., and W. C. Noble. 1986. Plasmids in group JK coryneform bacteria isolated in a single hospital. J. Hyg. (London) 97:255-263.
-
(1986)
J. Hyg. (London)
, vol.97
, pp. 255-263
-
-
Kerry-Williams, S.M.1
Noble, W.C.2
-
223
-
-
0022503930
-
Molecular epidemiology of group JK Corynebacterium on a cancer ward: Lack of evidence for patient-to-patient transmission
-
Khabbaz, R. F., J. B. Kaper, M. R. Moody, S. C. Schimpff, and J. H. Tenney. 1986. Molecular epidemiology of group JK Corynebacterium on a cancer ward: lack of evidence for patient-to-patient transmission. J. Infect. Dis. 154:95-99.
-
(1986)
J. Infect. Dis
, vol.154
, pp. 95-99
-
-
Khabbaz, R.F.1
Kaper, J.B.2
Moody, M.R.3
Schimpff, S.C.4
Tenney, J.H.5
-
224
-
-
0033765883
-
Characterization of pRGO1, a plasmid from Propionibacterium acidipropionici, and its use for development of a host-vector system in propionibacteria
-
Kiatpapan, P., Y. Hashimoto, H. Nakamura, Y. Z. Piao, H. Ono, M. Yamashita, and Y. Murooka. 2000. Characterization of pRGO1, a plasmid from Propionibacterium acidipropionici, and its use for development of a host-vector system in propionibacteria. Appl. Environ. Microbiol. 66:4688-4695.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 4688-4695
-
-
Kiatpapan, P.1
Hashimoto, Y.2
Nakamura, H.3
Piao, Y.Z.4
Ono, H.5
Yamashita, M.6
Murooka, Y.7
-
225
-
-
0003869903
-
-
The John Innes Foundation, Norwich, United Kingdom
-
Kieser, T., M. J. Bibb, M. J. Buttner, K. F. Chater, and D. A. Hopwood. 2000. Practical Streptomyces genetics. The John Innes Foundation, Norwich, United Kingdom.
-
(2000)
Practical Streptomyces genetics
-
-
Kieser, T.1
Bibb, M.J.2
Buttner, M.J.3
Chater, K.F.4
Hopwood, D.A.5
-
226
-
-
0032904917
-
Identification of mycobacterial species by comparative sequence analysis of the RNA polymerase gene (rpoB)
-
Kim, B. J., S. H. Lee, M. A. Lyu, S. J. Kim, G. H. Bai, G. T. Chae, E. C. Kim, C. Y. Cha, and Y. H. Kook. 1999. Identification of mycobacterial species by comparative sequence analysis of the RNA polymerase gene (rpoB). J. Clin. Microbiol. 37:1714-1720.
-
(1999)
J. Clin. Microbiol
, vol.37
, pp. 1714-1720
-
-
Kim, B.J.1
Lee, S.H.2
Lyu, M.A.3
Kim, S.J.4
Bai, G.H.5
Chae, G.T.6
Kim, E.C.7
Cha, C.Y.8
Kook, Y.H.9
-
227
-
-
26844571035
-
The whcE gene of Corynebacterium glutamicum is important for survival following heat and oxidative stress
-
Kim, T. H., J. S. Park, H. J. Kim, Y. Kim, P. Kim, and H. S. Lee. 2005. The whcE gene of Corynebacterium glutamicum is important for survival following heat and oxidative stress. Biochem. Biophys. Res. Commun. 337:757-764.
-
(2005)
Biochem. Biophys. Res. Commun
, vol.337
, pp. 757-764
-
-
Kim, T.H.1
Park, J.S.2
Kim, H.J.3
Kim, Y.4
Kim, P.5
Lee, H.S.6
-
228
-
-
85008095806
-
Production of L-glutamic acid by various microorgonisms
-
Kinoshita, S., S. Udaka, and M. Shimono. 1957. Production of L-glutamic acid by various microorgonisms. J. Gen. Appl. Microbiol. 3:193-205.
-
(1957)
J. Gen. Appl. Microbiol
, vol.3
, pp. 193-205
-
-
Kinoshita, S.1
Udaka, S.2
Shimono, M.3
-
229
-
-
0036194680
-
Cryptic plasmids of Mycobacterium avium: Tn552 to the rescue
-
Kirby, C., A. Waring, T. J. Griffin, J. O. Falkinham III, N. D. Grindley, and K. M. Derbyshire. 2002. Cryptic plasmids of Mycobacterium avium: Tn552 to the rescue. Mol. Microbiol. 43:173-186.
-
(2002)
Mol. Microbiol
, vol.43
, pp. 173-186
-
-
Kirby, C.1
Waring, A.2
Griffin, T.J.3
Falkinham III, J.O.4
Grindley, N.D.5
Derbyshire, K.M.6
-
230
-
-
0034074410
-
rRNA operon copy number reflects ecological strategies of bacteria
-
Klappenbach, J. A., J. M. Dunbar, and T. M. Schmidt. 2000. rRNA operon copy number reflects ecological strategies of bacteria. Appl. Environ Microbiol. 66:1328-1333.
-
(2000)
Appl. Environ Microbiol
, vol.66
, pp. 1328-1333
-
-
Klappenbach, J.A.1
Dunbar, J.M.2
Schmidt, T.M.3
-
231
-
-
0347990454
-
Evolution of minimal-gene-sets in host-dependent bacteria
-
Klasson, L., and S. G. Andersson. 2004. Evolution of minimal-gene-sets in host-dependent bacteria. Trends Microbiol. 12:37-43.
-
(2004)
Trends Microbiol
, vol.12
, pp. 37-43
-
-
Klasson, L.1
Andersson, S.G.2
-
233
-
-
0030993173
-
Dynamic bacterial genome organization
-
Kolsto, A. B. 1997. Dynamic bacterial genome organization. Mol. Microbiol. 24:241-248.
-
(1997)
Mol. Microbiol
, vol.24
, pp. 241-248
-
-
Kolsto, A.B.1
-
234
-
-
0037434959
-
Cloning of the conserved regulatory operon by its aerial mycelium-inducing activity in an amfR mutant of Streptomyces griseus
-
Komatsu, M., Y. Kuwahara, A. Hiroishi, K. Hosono, T. Beppu, and K. Ueda. 2003. Cloning of the conserved regulatory operon by its aerial mycelium-inducing activity in an amfR mutant of Streptomyces griseus. Gene 306:79-89.
-
(2003)
Gene
, vol.306
, pp. 79-89
-
-
Komatsu, M.1
Kuwahara, Y.2
Hiroishi, A.3
Hosono, K.4
Beppu, T.5
Ueda, K.6
-
235
-
-
1542327668
-
Trends between gene content and genome size in prokaryotic species with larger genomes
-
Konstantinidis, K. T., and J. M. Tiedje. 2004. Trends between gene content and genome size in prokaryotic species with larger genomes. Proc. Natl. Acad. Sci. USA 101:3160-3165.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 3160-3165
-
-
Konstantinidis, K.T.1
Tiedje, J.M.2
-
236
-
-
0036499057
-
SHOT: A web server for the construction of genome phylogenies
-
Korbel, J. O., B. Snel, M. A. Huynen, and P. Bork. 2002. SHOT: a web server for the construction of genome phylogenies. Trends Genet. 18:158-162.
-
(2002)
Trends Genet
, vol.18
, pp. 158-162
-
-
Korbel, J.O.1
Snel, B.2
Huynen, M.A.3
Bork, P.4
-
237
-
-
0037278372
-
The role of innate immunity in the pathogenesis of acne
-
Koreck, A., A. Pivarcsi, A. Dobozy, and L. Kemeny. 2003. The role of innate immunity in the pathogenesis of acne. Dermatology 206:96-105.
-
(2003)
Dermatology
, vol.206
, pp. 96-105
-
-
Koreck, A.1
Pivarcsi, A.2
Dobozy, A.3
Kemeny, L.4
-
238
-
-
0038235592
-
A small cryptic plasmid from Rhodococcus erythropolis: Characterization and utility for gene expression
-
Kostichka, K., L. Tao, M. Bramucci, J. F. Tomb, V. Nagarajan, and Q. Cheng. 2003. A small cryptic plasmid from Rhodococcus erythropolis: characterization and utility for gene expression. Appl. Microbiol. Biotechnol. 62:61-68.
-
(2003)
Appl. Microbiol. Biotechnol
, vol.62
, pp. 61-68
-
-
Kostichka, K.1
Tao, L.2
Bramucci, M.3
Tomb, J.F.4
Nagarajan, V.5
Cheng, Q.6
-
239
-
-
0028102267
-
Biochemistry of homologous recombination in Escherichia coli
-
Kowalczykowski, S. C., D. A. Dixon, A. K. Eggleston, S. D. Lauder, and W. M. Rehrauer. 1994. Biochemistry of homologous recombination in Escherichia coli. Microbiol. Rev. 58:401-465.
-
(1994)
Microbiol. Rev
, vol.58
, pp. 401-465
-
-
Kowalczykowski, S.C.1
Dixon, D.A.2
Eggleston, A.K.3
Lauder, S.D.4
Rehrauer, W.M.5
-
240
-
-
0035969489
-
Extensive surface diversity of a commensal microorganism by multiple DNA inversions
-
Krinos, C. M., M. J. Coyne, K. G. Weinacht, A. O. Tzianabos, D. L. Kasper, and L. E. Comstock. 2001. Extensive surface diversity of a commensal microorganism by multiple DNA inversions. Nature 414:555-558.
-
(2001)
Nature
, vol.414
, pp. 555-558
-
-
Krinos, C.M.1
Coyne, M.J.2
Weinacht, K.G.3
Tzianabos, A.O.4
Kasper, D.L.5
Comstock, L.E.6
-
241
-
-
0030610923
-
Cryptic plasmid pKA22 isolated from the naphthalene degrading derivative of Rhodococcus rhodochrous NCIMB13064
-
Kulakov, L. A., M. J. Larkin, and A. N. Kulakova. 1997. Cryptic plasmid pKA22 isolated from the naphthalene degrading derivative of Rhodococcus rhodochrous NCIMB13064. Plasmid 38:61-69.
-
(1997)
Plasmid
, vol.38
, pp. 61-69
-
-
Kulakov, L.A.1
Larkin, M.J.2
Kulakova, A.N.3
-
242
-
-
12844257519
-
Comparison of mammalian cell entry operons of mycobacteria: In silico analysis and expression profiling
-
Kumar, A., A. Chandolia, U. Chaudhry, V. Brahmachari, and M. Bose. 2005. Comparison of mammalian cell entry operons of mycobacteria: in silico analysis and expression profiling. FEMS Immunol. Med. Microbiol. 43:185-195.
-
(2005)
FEMS Immunol. Med. Microbiol
, vol.43
, pp. 185-195
-
-
Kumar, A.1
Chandolia, A.2
Chaudhry, U.3
Brahmachari, V.4
Bose, M.5
-
243
-
-
0038486918
-
The balance of driving forces during genome evolution in prokaryotes
-
Kunin, V., and C. A. Ouzounis. 2003. The balance of driving forces during genome evolution in prokaryotes. Genome Res. 13:1589-1594.
-
(2003)
Genome Res
, vol.13
, pp. 1589-1594
-
-
Kunin, V.1
Ouzounis, C.A.2
-
244
-
-
0029008544
-
Identification and chromosomal distribution of DNA sequence segments conserved since divergence of Escherichia coli and Bacillus subtilis
-
Kunisawa, T. 1995. Identification and chromosomal distribution of DNA sequence segments conserved since divergence of Escherichia coli and Bacillus subtilis. J. Mol. Evol. 40:585-593.
-
(1995)
J. Mol. Evol
, vol.40
, pp. 585-593
-
-
Kunisawa, T.1
-
245
-
-
0344825084
-
Analysis of the Corynebacterium diphtheriae DtxR regulon: Identification of a putative siderophore synthesis and transport system that is similar to the Yersinia high-pathogenicity island-encoded yersiniabactin synthesis and uptake system
-
Kunkle, C. A., and M. P. Schmitt. 2003. Analysis of the Corynebacterium diphtheriae DtxR regulon: identification of a putative siderophore synthesis and transport system that is similar to the Yersinia high-pathogenicity island-encoded yersiniabactin synthesis and uptake system. J. Bacteriol. 185: 6826-6840.
-
(2003)
J. Bacteriol
, vol.185
, pp. 6826-6840
-
-
Kunkle, C.A.1
Schmitt, M.P.2
-
246
-
-
0030731108
-
The complete genome sequence of the gram-positive bacterium Bacillus subtilis
-
Kunst, F., N. Ogasawara, I. Moszer, A. M. Albertini, G. Alloni, V. Azevedo, M. G. Bertero, P. Bessieres, A. Bolotin, S. Borchert, R. Borriss, L. Boursier, A. Brans, M. Braun, S. C. Brignell, S. Bron, S. Brouillet, C. V. Bruschi, B. Caldwell, V. Capuano, N. M. Carter, S. K. Choi, J. J. Codani, I. F. Connerton, A. Danchin, et al. 1997. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Nature 390:249-256.
-
(1997)
Nature
, vol.390
, pp. 249-256
-
-
Kunst, F.1
Ogasawara, N.2
Moszer, I.3
Albertini, A.M.4
Alloni, G.5
Azevedo, V.6
Bertero, M.G.7
Bessieres, P.8
Bolotin, A.9
Borchert, S.10
Borriss, R.11
Boursier, L.12
Brans, A.13
Braun, M.14
Brignell, S.C.15
Bron, S.16
Brouillet, S.17
Bruschi, C.V.18
Caldwell, B.19
Capuano, V.20
Carter, N.M.21
Choi, S.K.22
Codani, J.J.23
Connerton, I.F.24
Danchin, A.25
more..
-
247
-
-
0033826695
-
Oligosaccharides in human milk: Structural, functional, and metabolic aspects
-
Kunz, C., S. Rudloff, W. Baier, N. Klein, and S. Strobel. 2000. Oligosaccharides in human milk: structural, functional, and metabolic aspects. Annu. Rev. Nutr. 20:699-722.
-
(2000)
Annu. Rev. Nutr
, vol.20
, pp. 699-722
-
-
Kunz, C.1
Rudloff, S.2
Baier, W.3
Klein, N.4
Strobel, S.5
-
248
-
-
0031883231
-
Determination of a 15437 bp nucleotide sequence around the inhA gene of Mycobacterium avium and similarity analysis of the products of putative ORFs
-
Labo, M., L. Gusberti, E. D. Rossi, P. Speziale, and G. Riccardi. 1998. Determination of a 15437 bp nucleotide sequence around the inhA gene of Mycobacterium avium and similarity analysis of the products of putative ORFs. Microbiology 144:807-814.
-
(1998)
Microbiology
, vol.144
, pp. 807-814
-
-
Labo, M.1
Gusberti, L.2
Rossi, E.D.3
Speziale, P.4
Riccardi, G.5
-
249
-
-
0042672547
-
Cytochrome p450 complement (CYPome) of the avermectin-producer Streptomyces avermitilis and comparison to that of Streptomyces coelicolor A3(2)
-
Lamb, D. C., H. Ikeda, D. R. Nelson, J. Ishikawa, T. Skaug, C. Jackson, S. Omura, M. R. Waterman, and S. L. Kelly. 2003. Cytochrome p450 complement (CYPome) of the avermectin-producer Streptomyces avermitilis and comparison to that of Streptomyces coelicolor A3(2). Biochem. Biophys. Res. Commun. 307:610-619.
-
(2003)
Biochem. Biophys. Res. Commun
, vol.307
, pp. 610-619
-
-
Lamb, D.C.1
Ikeda, H.2
Nelson, D.R.3
Ishikawa, J.4
Skaug, T.5
Jackson, C.6
Omura, S.7
Waterman, M.R.8
Kelly, S.L.9
-
250
-
-
0037025384
-
The cytochrome P450 complement (CYPome) of Streptomyces coelicolor A3(2)
-
Lamb, D. C., T. Skaug, H. L. Song, C. J. Jackson, L. M. Podust, M. R. Waterman, D. B. Kell, D. E. Kelly, and S. L. Kelly. 2002. The cytochrome P450 complement (CYPome) of Streptomyces coelicolor A3(2). J. Biol. Chem. 277:24000-24005.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 24000-24005
-
-
Lamb, D.C.1
Skaug, T.2
Song, H.L.3
Jackson, C.J.4
Podust, L.M.5
Waterman, M.R.6
Kell, D.B.7
Kelly, D.E.8
Kelly, S.L.9
-
251
-
-
0034283229
-
Intraspecies variation in bacterial genomes: The need for a species genome concept
-
Lan, R., and P. R. Reeves. 2000. Intraspecies variation in bacterial genomes: the need for a species genome concept. Trends Microbiol. 8:396-401.
-
(2000)
Trends Microbiol
, vol.8
, pp. 396-401
-
-
Lan, R.1
Reeves, P.R.2
-
252
-
-
0029007928
-
DNA processing reactions in bacterial conjugation
-
Lanka, E., and B. M. Wilkins. 1995. DNA processing reactions in bacterial conjugation. Annu. Rev. Biochem. 64:141-169.
-
(1995)
Annu. Rev. Biochem
, vol.64
, pp. 141-169
-
-
Lanka, E.1
Wilkins, B.M.2
-
253
-
-
0023503633
-
Pleiotropic morphological and antibiotic deficiencies result from mutations in a gene encoding a tRNA-like product in Streptomyces coelicolor A3(2)
-
Lawlor, E. J., H. A. Baylis, and K. F. Chater. 1987. Pleiotropic morphological and antibiotic deficiencies result from mutations in a gene encoding a tRNA-like product in Streptomyces coelicolor A3(2). Genes Dev. 1:1305-1310.
-
(1987)
Genes Dev
, vol.1
, pp. 1305-1310
-
-
Lawlor, E.J.1
Baylis, H.A.2
Chater, K.F.3
-
254
-
-
20444469199
-
Getting better with bifidobacteria
-
Leahy, S. C., D. G. Higgins, G. F. Fitzgerald, and D. van Sinderen. 2005. Getting better with bifidobacteria. J. Appl. Microbiol. 98:1303-1315.
-
(2005)
J. Appl. Microbiol
, vol.98
, pp. 1303-1315
-
-
Leahy, S.C.1
Higgins, D.G.2
Fitzgerald, G.F.3
van Sinderen, D.4
-
256
-
-
0035368519
-
A transgenic model for listeriosis: Role of internalin in crossing the intestinal barrier
-
Lecuit, M., S. Vandormael-Pournin, J. Lefort, M. Huerre, P. Gounon, C. Dupuy, C. Babinet, and P. Cossart. 2001. A transgenic model for listeriosis: role of internalin in crossing the intestinal barrier. Science 292:1722-1725.
-
(2001)
Science
, vol.292
, pp. 1722-1725
-
-
Lecuit, M.1
Vandormael-Pournin, S.2
Lefort, J.3
Huerre, M.4
Gounon, P.5
Dupuy, C.6
Babinet, C.7
Cossart, P.8
-
257
-
-
0035079440
-
Genomic sequence and transcriptional analysis of a 23-kilobase mycobacterial linear plasmid: Evidence for horizontal transfer and identification of plasmid maintenance systems
-
Le Dantec, C., N. Winter, B. Gicquel, V. Vincent, and M. Picardeau. 2001. Genomic sequence and transcriptional analysis of a 23-kilobase mycobacterial linear plasmid: evidence for horizontal transfer and identification of plasmid maintenance systems. J. Bacteriol. 183:2157-2164.
-
(2001)
J. Bacteriol
, vol.183
, pp. 2157-2164
-
-
Le Dantec, C.1
Winter, N.2
Gicquel, B.3
Vincent, V.4
Picardeau, M.5
-
258
-
-
23844442155
-
A master regulator sigmaB governs osmotic and oxidative response as well as differentiation via a network of sigma factors in Streptomyces coelicolor
-
Lee, E. J., N. Karoonuthaisiri, H. S. Kim, J. H. Park, C. J. Cha, C. M. Kao, and J. H. Roe. 2005. A master regulator sigmaB governs osmotic and oxidative response as well as differentiation via a network of sigma factors in Streptomyces coelicolor. Mol. Microbiol. 57:1252-1264.
-
(2005)
Mol. Microbiol
, vol.57
, pp. 1252-1264
-
-
Lee, E.J.1
Karoonuthaisiri, N.2
Kim, H.S.3
Park, J.H.4
Cha, C.J.5
Kao, C.M.6
Roe, J.H.7
-
259
-
-
0036982053
-
Chitosan oligosaccharides, dp 2-8, have prebiotic effect on the Bifidobacterium bifidium and Lactobacillus sp
-
Lee, H. W., Y. S. Park, J. S. Jung, and W. S. Shin. 2002. Chitosan oligosaccharides, dp 2-8, have prebiotic effect on the Bifidobacterium bifidium and Lactobacillus sp. Anaerobe 8:319-324.
-
(2002)
Anaerobe
, vol.8
, pp. 319-324
-
-
Lee, H.W.1
Park, Y.S.2
Jung, J.S.3
Shin, W.S.4
-
260
-
-
33644863743
-
Sequence analysis of two cryptic plasmids from Bifidobacterium longum DJO10A and construction of a shuttle cloning vector
-
Lee, J. H., and D. J. O'Sullivan. 2006. Sequence analysis of two cryptic plasmids from Bifidobacterium longum DJO10A and construction of a shuttle cloning vector. Appl. Environ. Microbiol. 72:527-535.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 527-535
-
-
Lee, J.H.1
O'Sullivan, D.J.2
-
261
-
-
0026323938
-
Site-specific integration of mycobacteriophage L5: Integration-proficient vectors for Mycobacterium smegmatis, Mycobacterium tuberculosis, and bacille Calmette-Guerin
-
Lee, M. H., L. Pascopella, W. R. Jacobs, Jr., and G. F. Hatfull. 1991. Site-specific integration of mycobacteriophage L5: integration-proficient vectors for Mycobacterium smegmatis, Mycobacterium tuberculosis, and bacille Calmette-Guerin. Proc. Natl. Acad. Sci. USA 88:3111-3115.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 3111-3115
-
-
Lee, M.H.1
Pascopella, L.2
Jacobs Jr., W.R.3
Hatfull, G.F.4
-
262
-
-
0347004721
-
Availability of specific reductases controls the temporal activity of the cytochrome P450 complement of Streptomyces coelicolor A3(2)
-
Lei, L., M. R. Waterman, A. J. Fulco, S. L. Kelly, and D. C. Lamb. 2004. Availability of specific reductases controls the temporal activity of the cytochrome P450 complement of Streptomyces coelicolor A3(2). Proc. Natl. Acad. Sci. USA 101:494-499.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 494-499
-
-
Lei, L.1
Waterman, M.R.2
Fulco, A.J.3
Kelly, S.L.4
Lamb, D.C.5
-
263
-
-
8744222652
-
Psi-Phi: Exploring the outer limits of bacterial pseudogenes
-
Lerat, E., and H. Ochman. 2004. Psi-Phi: exploring the outer limits of bacterial pseudogenes. Genome Res. 14:2273-2278.
-
(2004)
Genome Res
, vol.14
, pp. 2273-2278
-
-
Lerat, E.1
Ochman, H.2
-
264
-
-
0026344181
-
The use of a rare codon specifically during development?
-
Leskiw, B. K., M. J. Bibb, and K. F. Chater. 1991. The use of a rare codon specifically during development? Mol. Microbiol. 5:2861-2867.
-
(1991)
Mol. Microbiol
, vol.5
, pp. 2861-2867
-
-
Leskiw, B.K.1
Bibb, M.J.2
Chater, K.F.3
-
265
-
-
0026029699
-
TTA codons in some genes prevent their expression in a class of developmental, antibiotic-negative, Streptomyces mutants
-
Leskiw, B. K., E. J. Lawlor, J. M. Fernandez-Abalos, and K. F. Chater. 1991. TTA codons in some genes prevent their expression in a class of developmental, antibiotic-negative, Streptomyces mutants. Proc. Natl. Acad. Sci. USA 88:2461-2465.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 2461-2465
-
-
Leskiw, B.K.1
Lawlor, E.J.2
Fernandez-Abalos, J.M.3
Chater, K.F.4
-
266
-
-
0027457408
-
Accumulation of bldA-specified tRNA is temporally regulated in Streptomyces coelicolor A3(2)
-
Leskiw, B. K., R. Mah, E. J. Lawlor, and K. F. Chater. 1993. Accumulation of bldA-specified tRNA is temporally regulated in Streptomyces coelicolor A3(2). J. Bacteriol. 175:1995-2005.
-
(1993)
J. Bacteriol
, vol.175
, pp. 1995-2005
-
-
Leskiw, B.K.1
Mah, R.2
Lawlor, E.J.3
Chater, K.F.4
-
267
-
-
28344455644
-
Biotechnological production of amino acids and derivatives: Current status and prospects
-
Leuchtenberger, W., K. Huthmacher, and K. Drauz. 2005. Biotechnological production of amino acids and derivatives: current status and prospects. Appl. Microbiol. Biotechnol. 69:1-8.
-
(2005)
Appl. Microbiol. Biotechnol
, vol.69
, pp. 1-8
-
-
Leuchtenberger, W.1
Huthmacher, K.2
Drauz, K.3
-
268
-
-
24644441020
-
The complete genome sequence of Mycobacterium avium subspecies paratuberculosis
-
Li, L., J. P. Bannantine, Q. Zhang, A. Amonsin, B. J. May, D. Alt, N. Banerji, S. Kanjilal, and V. Kapur. 2005. The complete genome sequence of Mycobacterium avium subspecies paratuberculosis. Proc. Natl. Acad. Sci. USA 102:12344-12349.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 12344-12349
-
-
Li, L.1
Bannantine, J.P.2
Zhang, Q.3
Amonsin, A.4
May, B.J.5
Alt, D.6
Banerji, N.7
Kanjilal, S.8
Kapur, V.9
-
269
-
-
2942722264
-
Characterization of the replicon of a 51-kb native plasmid from the gram-positive bacterium Leifsonia xyli subsp. cynodontis
-
Li, T. Y., P. Yin, Y. Zhou, Y. Zhang, Y. Y. Zhang, and T. A. Chen. 2004. Characterization of the replicon of a 51-kb native plasmid from the gram-positive bacterium Leifsonia xyli subsp. cynodontis. FEMS Microbiol. Lett. 236:33-39.
-
(2004)
FEMS Microbiol. Lett
, vol.236
, pp. 33-39
-
-
Li, T.Y.1
Yin, P.2
Zhou, Y.3
Zhang, Y.4
Zhang, Y.Y.5
Chen, T.A.6
-
270
-
-
33845545433
-
A genetic and bioinformatic analysis of Streptomyces coelicor genes containing TTA codons, possible targets for regulation by developmentally significant tRNA
-
Li, W., J. Wu, W. Tao, C. Zhao, Y. Wang, X. He, G. Chandra, X. Zhou, Z. Deng, K. F. Chater, and M. Tao. 2007. A genetic and bioinformatic analysis of Streptomyces coelicor genes containing TTA codons, possible targets for regulation by developmentally significant tRNA. FEMS Microbiol. Lett. 266:20-28.
-
(2007)
FEMS Microbiol. Lett
, vol.266
, pp. 20-28
-
-
Li, W.1
Wu, J.2
Tao, W.3
Zhao, C.4
Wang, Y.5
He, X.6
Chandra, G.7
Zhou, X.8
Deng, Z.9
Chater, K.F.10
Tao, M.11
-
271
-
-
15944409915
-
A Mycobacterium avium PPE gene is associated with the ability of the bacterium to grow in macrophages and virulence in mice
-
Li, Y., E. Miltner, M. Wu, M. Petrofsky, and L. E. Bermudez. 2005. A Mycobacterium avium PPE gene is associated with the ability of the bacterium to grow in macrophages and virulence in mice. Cell. Microbiol. 7:539-548.
-
(2005)
Cell. Microbiol
, vol.7
, pp. 539-548
-
-
Li, Y.1
Miltner, E.2
Wu, M.3
Petrofsky, M.4
Bermudez, L.E.5
-
273
-
-
0033762339
-
Bifidobacterium strains from resident infant human gastrointestinal microflora exert antimicrobial activity
-
Lievin, V., I. Peiffer, S. Hudault, F. Rochat, D. Brassart, J. R. Neeser, and A. L. Servin. 2000. Bifidobacterium strains from resident infant human gastrointestinal microflora exert antimicrobial activity. Gut 47:646-652.
-
(2000)
Gut
, vol.47
, pp. 646-652
-
-
Lievin, V.1
Peiffer, I.2
Hudault, S.3
Rochat, F.4
Brassart, D.5
Neeser, J.R.6
Servin, A.L.7
-
274
-
-
0027751336
-
The chromosomal DNA of Streptomyces lividans 66 is linear
-
Lin, Y. S., H. M. Kieser, D. A. Hopwood, and C. W. Chen. 1993. The chromosomal DNA of Streptomyces lividans 66 is linear. Mol. Microbiol. 10:923-933.
-
(1993)
Mol. Microbiol
, vol.10
, pp. 923-933
-
-
Lin, Y.S.1
Kieser, H.M.2
Hopwood, D.A.3
Chen, C.W.4
-
275
-
-
0037085991
-
Reverse transcriptase-mediated tropism switching in Bordetella bacteriophage
-
Liu, M., R. Deora, S. R. Doulatov, M. Gingery, F. A. Eiserling, A. Preston, D. J. Maskell, R. W. Simons, P. A. Cotter, J. Parkhill, and J. F. Miller. 2002. Reverse transcriptase-mediated tropism switching in Bordetella bacteriophage. Science 295:2091-2094.
-
(2002)
Science
, vol.295
, pp. 2091-2094
-
-
Liu, M.1
Deora, R.2
Doulatov, S.R.3
Gingery, M.4
Eiserling, F.A.5
Preston, A.6
Maskell, D.J.7
Simons, R.W.8
Cotter, P.A.9
Parkhill, J.10
Miller, J.F.11
-
276
-
-
29244432526
-
Genome update: Lactic acid bacteria genome sequencing is booming
-
Liu, M., F. H. van Enckevort, and R. J. Siezen. 2005. Genome update: lactic acid bacteria genome sequencing is booming. Microbiology 151:3811-3814.
-
(2005)
Microbiology
, vol.151
, pp. 3811-3814
-
-
Liu, M.1
van Enckevort, F.H.2
Siezen, R.J.3
-
277
-
-
0034083691
-
Cloning and characterization of the replicon of the Nocardia italica plasmid, pNI100
-
Liu, Y. T., C. M. Su, C. H. Lee, M. J. Sui, Y. H. Chang, W. P. Lin, W. T. Wu, and C. Y. Chen. 2000. Cloning and characterization of the replicon of the Nocardia italica plasmid, pNI100. Plasmid 43:223-229.
-
(2000)
Plasmid
, vol.43
, pp. 223-229
-
-
Liu, Y.T.1
Su, C.M.2
Lee, C.H.3
Sui, M.J.4
Chang, Y.H.5
Lin, W.P.6
Wu, W.T.7
Chen, C.Y.8
-
278
-
-
0037676132
-
Polarisation of prokaryotic chromosomes
-
Lobry, J. R., and J. M. Louarn. 2003. Polarisation of prokaryotic chromosomes. Curr. Opin. Microbiol. 6:101-108.
-
(2003)
Curr. Opin. Microbiol
, vol.6
, pp. 101-108
-
-
Lobry, J.R.1
Louarn, J.M.2
-
279
-
-
0019294947
-
Genetics and molecular biology of Streptomyces bacteriophages
-
Lomovskaya, N. D., K. F. Chater, and N. M. Mkrtumian. 1980. Genetics and molecular biology of Streptomyces bacteriophages. Microbiol. Rev. 44:206-229.
-
(1980)
Microbiol. Rev
, vol.44
, pp. 206-229
-
-
Lomovskaya, N.D.1
Chater, K.F.2
Mkrtumian, N.M.3
-
280
-
-
33748951425
-
Evolution of plant pathogenicity in Streptomyces
-
Loria, R., J. Kers, and M. Joshi. 2006. Evolution of plant pathogenicity in Streptomyces. Annu. Rev. Phytopathol. 44:469-487.
-
(2006)
Annu. Rev. Phytopathol
, vol.44
, pp. 469-487
-
-
Loria, R.1
Kers, J.2
Joshi, M.3
-
281
-
-
33947135278
-
Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX
-
Lykidis, A., K. Mavromatis, N. Ivanova, I. Anderson, M. Land, G. Dibartolo, M. Martinez, A. Lapidus, S. Lucas, A. Copeland, P. Richardson, D. B. Wilson, and N. Kyrpides. 2007. Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX. J. Bacteriol. 189:2477-2486.
-
(2007)
J. Bacteriol
, vol.189
, pp. 2477-2486
-
-
Lykidis, A.1
Mavromatis, K.2
Ivanova, N.3
Anderson, I.4
Land, M.5
Dibartolo, G.6
Martinez, M.7
Lapidus, A.8
Lucas, S.9
Copeland, A.10
Richardson, P.11
Wilson, D.B.12
Kyrpides, N.13
-
282
-
-
0029817508
-
Reassessment of the phylogenetic position of the bacterium associated with Whipple's disease and determination of the 16S-23S ribosomal intergenic spacer sequence
-
Maiwald, M., H. J. Ditton, A. von Herbay, F. A. Rainey, and E. Stackebrandt. 1996. Reassessment of the phylogenetic position of the bacterium associated with Whipple's disease and determination of the 16S-23S ribosomal intergenic spacer sequence. Int. J. Syst. Bacteriol. 46:1078-1082.
-
(1996)
Int. J. Syst. Bacteriol
, vol.46
, pp. 1078-1082
-
-
Maiwald, M.1
Ditton, H.J.2
von Herbay, A.3
Rainey, F.A.4
Stackebrandt, E.5
-
283
-
-
0031913564
-
Environmental occurrence of the Whipple's disease bacterium (Tropheryma whippelii)
-
Maiwald, M., F. Schuhmacher, H. J. Ditton, and A. von Herbay. 1998. Environmental occurrence of the Whipple's disease bacterium (Tropheryma whippelii). Appl. Environ. Microbiol. 64:760-762.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 760-762
-
-
Maiwald, M.1
Schuhmacher, F.2
Ditton, H.J.3
von Herbay, A.4
-
284
-
-
33947249635
-
Corynebacterium diphtheriae employs specific minor pilins to target human pharyngeal epithelial cells
-
Mandlik, A., A. Swierczynski, A. Das, and H. Ton-That. 2007. Corynebacterium diphtheriae employs specific minor pilins to target human pharyngeal epithelial cells. Mol. Microbiol. 64:111-124.
-
(2007)
Mol. Microbiol
, vol.64
, pp. 111-124
-
-
Mandlik, A.1
Swierczynski, A.2
Das, A.3
Ton-That, H.4
-
285
-
-
0028523733
-
Characterization of the plasmid pVS809 from Bifidobacterium globosum
-
Mattarelli, P., B. Biavati, A. Alessandrini, F. Crociani, and V. Scardovi. 1994. Characterization of the plasmid pVS809 from Bifidobacterium globosum. New Microbiol. 17:327-331.
-
(1994)
New Microbiol
, vol.17
, pp. 327-331
-
-
Mattarelli, P.1
Biavati, B.2
Alessandrini, A.3
Crociani, F.4
Scardovi, V.5
-
287
-
-
33846457022
-
Identification and characterization of a fructose phosphotransferase system in Bifidobacterium breve UCC2003
-
Maze, A., M. O'Connell-Motherway, G. F. Fitzgerald, J. Deutscher, and D. van Sinderen. 2007. Identification and characterization of a fructose phosphotransferase system in Bifidobacterium breve UCC2003. Appl. Environ. Microbiol. 73:545-553.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 545-553
-
-
Maze, A.1
O'Connell-Motherway, M.2
Fitzgerald, G.F.3
Deutscher, J.4
van Sinderen, D.5
-
288
-
-
0032417093
-
Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomes
-
McLean, M. J., K. H. Wolfe, and K. M. Devine. 1998. Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomes. J. Mol. Evol 47:691-696.
-
(1998)
J. Mol. Evol
, vol.47
, pp. 691-696
-
-
McLean, M.J.1
Wolfe, K.H.2
Devine, K.M.3
-
289
-
-
4344580277
-
Complete genome sequence of Rickettsia typhi and comparison with sequences of other rickettsiae
-
McLeod, M. P., X. Qin, S. E. Karpathy, J. Gioia, S. K. Highlander, G. E. Fox, T. Z. McNeill, H. Jiang, D. Muzny, L. S. Jacob, A. C. Hawes, E. Sodergren, R. Gill, J. Hume, M. Morgan, G. Fan, A. G. Amin, R. A. Gibbs, C. Hong, X. J. Yu, D. H. Walker, and G. M. Weinstock. 2004. Complete genome sequence of Rickettsia typhi and comparison with sequences of other rickettsiae. J. Bacteriol. 186:5842-5855.
-
(2004)
J. Bacteriol
, vol.186
, pp. 5842-5855
-
-
McLeod, M.P.1
Qin, X.2
Karpathy, S.E.3
Gioia, J.4
Highlander, S.K.5
Fox, G.E.6
McNeill, T.Z.7
Jiang, H.8
Muzny, D.9
Jacob, L.S.10
Hawes, A.C.11
Sodergren, E.12
Gill, R.13
Hume, J.14
Morgan, M.15
Fan, G.16
Amin, A.G.17
Gibbs, R.A.18
Hong, C.19
Yu, X.J.20
Walker, D.H.21
Weinstock, G.M.22
more..
-
290
-
-
0034536178
-
Genome organization and characterization of mycobacteriophage Bxb1
-
Mediavilla, J., S. Jain, J. Kriakov, M. E. Ford, R. L. Duda, W. R. Jacobs, Jr., R. W. Hendrix, and G. F. Hatfull. 2000. Genome organization and characterization of mycobacteriophage Bxb1. Mol. Microbiol. 38:955-970.
-
(2000)
Mol. Microbiol
, vol.38
, pp. 955-970
-
-
Mediavilla, J.1
Jain, S.2
Kriakov, J.3
Ford, M.E.4
Duda, R.L.5
Jacobs Jr., W.R.6
Hendrix, R.W.7
Hatfull, G.F.8
-
291
-
-
0029869384
-
E-cadherin is the receptor for internalin, a surface protein required for entry of L. monocytogenes into epithelial cells
-
Mengaud, J., H. Ohayon, P. Gounon, R. M. Mege, and P. Cossart. 1996. E-cadherin is the receptor for internalin, a surface protein required for entry of L. monocytogenes into epithelial cells. Cell 84:923-932.
-
(1996)
Cell
, vol.84
, pp. 923-932
-
-
Mengaud, J.1
Ohayon, H.2
Gounon, P.3
Mege, R.M.4
Cossart, P.5
-
292
-
-
0026655207
-
Transformation of the gram-positive bacterium Clavibacter xyli subsp. cynodontis by electroporation with plasmids from the IncP incompatibility group
-
Metzler, M. C., Y. P. Zhang, and T. A. Chen. 1992. Transformation of the gram-positive bacterium Clavibacter xyli subsp. cynodontis by electroporation with plasmids from the IncP incompatibility group. J. Bacteriol. 174:4500-4503.
-
(1992)
J. Bacteriol
, vol.174
, pp. 4500-4503
-
-
Metzler, M.C.1
Zhang, Y.P.2
Chen, T.A.3
-
293
-
-
0035479142
-
Deletional bias and the evolution of bacterial genomes
-
Mira, A., H. Ochman, and N. A. Moran. 2001. Deletional bias and the evolution of bacterial genomes. Trends Genet. 17:589-596.
-
(2001)
Trends Genet
, vol.17
, pp. 589-596
-
-
Mira, A.1
Ochman, H.2
Moran, N.A.3
-
294
-
-
0030943795
-
Propionibacterium acnes, a resident of lipid-rich human skin, produces a 33 kDa extracellular lipase encoded by gehA
-
Miskin, J. E., A. M. Farrell, W. J. Cunliffe, and K. T. Holland. 1997. Propionibacterium acnes, a resident of lipid-rich human skin, produces a 33 kDa extracellular lipase encoded by gehA. Microbiology 143:1745-1755.
-
(1997)
Microbiology
, vol.143
, pp. 1745-1755
-
-
Miskin, J.E.1
Farrell, A.M.2
Cunliffe, W.J.3
Holland, K.T.4
-
295
-
-
0004262906
-
-
Society for Actinomycetes Japan, Asakura Publishing Co, Tokyo, Japan
-
Miyadoh, S. 1997. Atlas of actinomycetes. Society for Actinomycetes Japan, Asakura Publishing Co., Tokyo, Japan.
-
(1997)
Atlas of actinomycetes
-
-
Miyadoh, S.1
-
296
-
-
0038644393
-
The large linear plasmid pSLA2-L of Streptomyces rochei has an unusually condensed gene organization for secondary metabolism
-
Mochizuki, S., K. Hiratsu, M. Suwa, T. Ishii, F. Sugino, K. Yamada, and H. Kinashi. 2003. The large linear plasmid pSLA2-L of Streptomyces rochei has an unusually condensed gene organization for secondary metabolism. Mol. Microbiol. 48:1501-1510.
-
(2003)
Mol. Microbiol
, vol.48
, pp. 1501-1510
-
-
Mochizuki, S.1
Hiratsu, K.2
Suwa, M.3
Ishii, T.4
Sugino, F.5
Yamada, K.6
Kinashi, H.7
-
297
-
-
0034034401
-
Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria
-
Mojica, F. J., C. Diez-Villasenor, E. Soria, and G. Juez. 2000. Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria. Mol. Microbiol. 36:244-246.
-
(2000)
Mol. Microbiol
, vol.36
, pp. 244-246
-
-
Mojica, F.J.1
Diez-Villasenor, C.2
Soria, E.3
Juez, G.4
-
298
-
-
0033969146
-
WhiD and WhiB, homologous proteins required for different stages of sporulation in Streptomyces coelicolor A3(2)
-
Molle, V., W. J. Palframan, K. C. Findlay, and M. J. Buttner. 2000. WhiD and WhiB, homologous proteins required for different stages of sporulation in Streptomyces coelicolor A3(2). J. Bacteriol. 182:1286-1295.
-
(2000)
J. Bacteriol
, vol.182
, pp. 1286-1295
-
-
Molle, V.1
Palframan, W.J.2
Findlay, K.C.3
Buttner, M.J.4
-
299
-
-
20844450995
-
On the origin of leprosy
-
Monot, M., N. Honore, T. Garnier, R. Araoz, J. Y. Coppee, C. Lacroix, S. Sow, J. S. Spencer, R. W. Truman, D. L. Williams, R. Gelber, M. Virmond, B. Flageul, S. N. Cho, B. Ji, A. Paniz-Mondolfi, J. Convit, S. Young, P. E. Fine, V. Rasolofo, P. J. Brennan, and S. T. Cole. 2005. On the origin of leprosy. Science 308:1040-1042.
-
(2005)
Science
, vol.308
, pp. 1040-1042
-
-
Monot, M.1
Honore, N.2
Garnier, T.3
Araoz, R.4
Coppee, J.Y.5
Lacroix, C.6
Sow, S.7
Spencer, J.S.8
Truman, R.W.9
Williams, D.L.10
Gelber, R.11
Virmond, M.12
Flageul, B.13
Cho, S.N.14
Ji, B.15
Paniz-Mondolfi, A.16
Convit, J.17
Young, S.18
Fine, P.E.19
Rasolofo, V.20
Brennan, P.J.21
Cole, S.T.22
more..
-
300
-
-
3242690878
-
-
Monteiro-Vitorello, C. B, L. E. Camargo, M. A. Van Sluys, J. P. Kitajima, D. Truffi, A. M. do Amaral, R. Harakava, J. C. de Oliveira, D. Wood, M. C. de Oliveira, C. Miyaki, M. A. Takita, A. C. da Silva, L. R. Furlan, D. M. Carraro, G. Camarotte, N. F. Almeida, Jr, H. Carrer, L. L. Coutinho, H. A. El-Dorry, M. I. Ferro, P. R. Gagliardi, E. Giglioti, M. H. Goldman, G. H. Goldman, E. T. Kimura, E. S. Ferro, E. E. Kuramae, E. G. Lemos, M. V. Lemos, S. M. Mauro, M. A. Machado, C. L. Marino, C. F. Menck, L. R. Nunes, R. C. Oliveira, G. G. Pereira, W. Siqueira, A. A. de Souza, S. M. Tsai, A. S. Zanca, A. J. Simpson, S. M. Brumbley, and J. C. Setubal. 2004. The genome sequence of the gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli. Mol. Plant-Microbe Interact. 17:827-836
-
Monteiro-Vitorello, C. B., L. E. Camargo, M. A. Van Sluys, J. P. Kitajima, D. Truffi, A. M. do Amaral, R. Harakava, J. C. de Oliveira, D. Wood, M. C. de Oliveira, C. Miyaki, M. A. Takita, A. C. da Silva, L. R. Furlan, D. M. Carraro, G. Camarotte, N. F. Almeida, Jr., H. Carrer, L. L. Coutinho, H. A. El-Dorry, M. I. Ferro, P. R. Gagliardi, E. Giglioti, M. H. Goldman, G. H. Goldman, E. T. Kimura, E. S. Ferro, E. E. Kuramae, E. G. Lemos, M. V. Lemos, S. M. Mauro, M. A. Machado, C. L. Marino, C. F. Menck, L. R. Nunes, R. C. Oliveira, G. G. Pereira, W. Siqueira, A. A. de Souza, S. M. Tsai, A. S. Zanca, A. J. Simpson, S. M. Brumbley, and J. C. Setubal. 2004. The genome sequence of the gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli. Mol. Plant-Microbe Interact. 17:827-836.
-
-
-
-
301
-
-
0014768420
-
Fine structure of Corynebacterium acnes
-
Montes, L. F., and W. H. Wilborn. 1970. Fine structure of Corynebacterium acnes. J. Investig. Dermatol. 54:338-345.
-
(1970)
J. Investig. Dermatol
, vol.54
, pp. 338-345
-
-
Montes, L.F.1
Wilborn, W.H.2
-
302
-
-
0037040394
-
Microbial minimalism: Genome reduction in bacterial pathogens
-
Moran, N. A. 2002. Microbial minimalism: genome reduction in bacterial pathogens. Cell 108:583-586.
-
(2002)
Cell
, vol.108
, pp. 583-586
-
-
Moran, N.A.1
-
303
-
-
10744227871
-
Effects of iron limitation on adherence and cell surface carbohydrates of Corynebacterium diphtheriae strains
-
Moreira Lde, O., A. F. Andrade, M. D. Vale, S. M. Souza, R. Hirata, Jr., L. M. Asad, N. R. Asad, L. H. Monteiro-Leal, J. O. Previato, and A. L. Mattos-Guaraldi. 2003. Effects of iron limitation on adherence and cell surface carbohydrates of Corynebacterium diphtheriae strains. Appl. Environ. Microbiol. 69:5907-5913.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 5907-5913
-
-
Moreira Lde, O.1
Andrade, A.F.2
Vale, M.D.3
Souza, S.M.4
Hirata Jr., R.5
Asad, L.M.6
Asad, N.R.7
Monteiro-Leal, L.H.8
Previato, J.O.9
Mattos-Guaraldi, A.L.10
-
304
-
-
24744436623
-
Ancestral antibiotic resistance in Mycobacterium tuberculosis
-
Morris, R. P., L. Nguyen, J. Gatfield, K. Visconti, K. Nguyen, D. Schnappinger, S. Ehrt, Y. Liu, L. Heifets, J. Pieters, G. Schoolnik, and C. J. Thompson. 2005. Ancestral antibiotic resistance in Mycobacterium tuberculosis. Proc. Natl. Acad. Sci. USA 102:12200-12205.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 12200-12205
-
-
Morris, R.P.1
Nguyen, L.2
Gatfield, J.3
Visconti, K.4
Nguyen, K.5
Schnappinger, D.6
Ehrt, S.7
Liu, Y.8
Heifets, L.9
Pieters, J.10
Schoolnik, G.11
Thompson, C.J.12
-
305
-
-
24944432278
-
Revisiting the evolution of Mycobacterium bovis
-
Mostowy, S., J. Inwald, S. Gordon, C. Martin, R. Warren, K. Kremer, D. Cousins, and M. A. Behr. 2005. Revisiting the evolution of Mycobacterium bovis. J. Bacteriol. 187:6386-6395.
-
(2005)
J. Bacteriol
, vol.187
, pp. 6386-6395
-
-
Mostowy, S.1
Inwald, J.2
Gordon, S.3
Martin, C.4
Warren, R.5
Kremer, K.6
Cousins, D.7
Behr, M.A.8
-
306
-
-
0036928372
-
Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1 (supplement)
-
Nakamura, Y., T. Kaneko, S. Sato, M. Ikeuchi, H. Katoh, S. Sasamoto, A. Watanabe, M. Iriguchi, K. Kawashima, T. Kimura, Y. Kishida, C. Kiyokawa, M. Kohara, M. Matsumoto, A. Matsuno, N. Nakazaki, S. Shimpo, M. Sugimoto, C. Takeuchi, M. Yamada, and S. Tabata. 2002. Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1 (supplement). DNA Res. 9:135-148.
-
(2002)
DNA Res
, vol.9
, pp. 135-148
-
-
Nakamura, Y.1
Kaneko, T.2
Sato, S.3
Ikeuchi, M.4
Katoh, H.5
Sasamoto, S.6
Watanabe, A.7
Iriguchi, M.8
Kawashima, K.9
Kimura, T.10
Kishida, Y.11
Kiyokawa, C.12
Kohara, M.13
Matsumoto, M.14
Matsuno, A.15
Nakazaki, N.16
Shimpo, S.17
Sugimoto, M.18
Takeuchi, C.19
Yamada, M.20
Tabata, S.21
more..
-
307
-
-
0242353120
-
The genome stability in Corynebacterium species due to lack of the recombinational repair system
-
Nakamura, Y., Y. Nishio, K. Ikeo, and T. Gojobori. 2003. The genome stability in Corynebacterium species due to lack of the recombinational repair system. Gene 317:149-155.
-
(2003)
Gene
, vol.317
, pp. 149-155
-
-
Nakamura, Y.1
Nishio, Y.2
Ikeo, K.3
Gojobori, T.4
-
309
-
-
4644233997
-
Isolation and characterization of a rolling-circle-type plasmid from Rhodococcus erythropolis and application of the plasmid to multiple-recombinant-protein expression
-
Nakashima, N., and T. Tamura. 2004. Isolation and characterization of a rolling-circle-type plasmid from Rhodococcus erythropolis and application of the plasmid to multiple-recombinant-protein expression. Appl. Environ. Microbiol. 70:5557-5568.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 5557-5568
-
-
Nakashima, N.1
Tamura, T.2
-
310
-
-
0037458606
-
A specific bacterial aminoacylase cleaves odorant precursors secreted in the human axilla
-
Natsch, A., H. Gfeller, P. Gygax, J. Schmid, and G. Acuna. 2003. A specific bacterial aminoacylase cleaves odorant precursors secreted in the human axilla. J. Biol. Chem. 278:5718-5727.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 5718-5727
-
-
Natsch, A.1
Gfeller, H.2
Gygax, P.3
Schmid, J.4
Acuna, G.5
-
311
-
-
0028800051
-
Transcriptional regulation of repressor synthesis in mycobacteriophage L5
-
Nesbit, C. E., M. E. Levin, M. K. Donnelly-Wu, and G. F. Hatfull. 1995. Transcriptional regulation of repressor synthesis in mycobacteriophage L5. Mol. Microbiol. 17:1045-1056.
-
(1995)
Mol. Microbiol
, vol.17
, pp. 1045-1056
-
-
Nesbit, C.E.1
Levin, M.E.2
Donnelly-Wu, M.K.3
Hatfull, G.F.4
-
312
-
-
0036840286
-
Mode of action of the antimicrobial peptide aureocin A53 from Staphylococcus aureus
-
Netz, D. J., C. Bastos Mdo, and H. G. Sahl. 2002. Mode of action of the antimicrobial peptide aureocin A53 from Staphylococcus aureus. Appl. Environ. Microbiol. 68:5274-5280.
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 5274-5280
-
-
Netz, D.J.1
Bastos Mdo, C.2
Sahl, H.G.3
-
313
-
-
0036301056
-
Biochemical characterisation and genetic analysis of aureocin A53, a new, atypical bacteriocin from Staphylococcus aureus
-
Netz, D. J., R. Pohl, A. G. Beck-Sickinger, T. Selmer, A. J. Pierik, C. Bastos Mdo, and H. G. Sahl. 2002. Biochemical characterisation and genetic analysis of aureocin A53, a new, atypical bacteriocin from Staphylococcus aureus. J. Mol. Biol. 319:745-756.
-
(2002)
J. Mol. Biol
, vol.319
, pp. 745-756
-
-
Netz, D.J.1
Pohl, R.2
Beck-Sickinger, A.G.3
Selmer, T.4
Pierik, A.J.5
Bastos Mdo, C.6
Sahl, H.G.7
-
314
-
-
0345529055
-
Colonial differentiation in Streptomyces coelicolor depends on translation of a specific codon within the adpA gene
-
Nguyen, K. T., J. Tenor, H. Stettler, L. T. Nguyen, L. D. Nguyen, and C. J. Thompson. 2003. Colonial differentiation in Streptomyces coelicolor depends on translation of a specific codon within the adpA gene. J. Bacteriol. 185:7291-7296.
-
(2003)
J. Bacteriol
, vol.185
, pp. 7291-7296
-
-
Nguyen, K.T.1
Tenor, J.2
Stettler, H.3
Nguyen, L.T.4
Nguyen, L.D.5
Thompson, C.J.6
-
315
-
-
0038348187
-
Molecular cloning and characterization of the alkaline ceramidase from Pseudomonas aeruginosa PA01
-
Nieuwenhuizen, W. F., S. van Leeuwen, R. W. Jack, M. R. Egmond, and F. Gotz. 2003. Molecular cloning and characterization of the alkaline ceramidase from Pseudomonas aeruginosa PA01. Protein Expr. Purif. 30:94-104.
-
(2003)
Protein Expr. Purif
, vol.30
, pp. 94-104
-
-
Nieuwenhuizen, W.F.1
van Leeuwen, S.2
Jack, R.W.3
Egmond, M.R.4
Gotz, F.5
-
316
-
-
0028276569
-
Cloning and sequence analysis of a Streptomyces cholesterol esterase gene
-
Nishimura, M., and M. Sugiyama. 1994. Cloning and sequence analysis of a Streptomyces cholesterol esterase gene. Appl. Microbiol. Biotechnol. 41:419-424.
-
(1994)
Appl. Microbiol. Biotechnol
, vol.41
, pp. 419-424
-
-
Nishimura, M.1
Sugiyama, M.2
-
317
-
-
0037810546
-
Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens
-
Nishio, Y., Y. Nakamura, Y. Kawarabayasi, Y. Usuda, E. Kimura, S. Sugimoto, K. Matsui, A. Yamagishi, H. Kikuchi, K. Ikeo, and T. Gojobori. 2003. Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens. Genome Res. 13:1572-1579.
-
(2003)
Genome Res
, vol.13
, pp. 1572-1579
-
-
Nishio, Y.1
Nakamura, Y.2
Kawarabayasi, Y.3
Usuda, Y.4
Kimura, E.5
Sugimoto, S.6
Matsui, K.7
Yamagishi, A.8
Kikuchi, H.9
Ikeo, K.10
Gojobori, T.11
-
318
-
-
4143054574
-
Evolutionary process of amino acid biosynthesis in Corynebacterium at the whole genome level
-
Nishio, Y., Y. Nakamura, Y. Usuda, S. Sugimoto, K. Matsui, Y. Kawarabayasi, H. Kikuchi, T. Gojobori, and K. Ikeo. 2004. Evolutionary process of amino acid biosynthesis in Corynebacterium at the whole genome level. Mol. Biol. Evol. 21:1683-1691.
-
(2004)
Mol. Biol. Evol
, vol.21
, pp. 1683-1691
-
-
Nishio, Y.1
Nakamura, Y.2
Usuda, Y.3
Sugimoto, S.4
Matsui, K.5
Kawarabayasi, Y.6
Kikuchi, H.7
Gojobori, T.8
Ikeo, K.9
-
319
-
-
27944458298
-
SsgA-like proteins determine the fate of peptidoglycan during sporulation of Streptomyces coelicolor
-
Noens, E. E., V. Mersinias, B. A. Traag, C. P. Smith, H. K. Koerten, and G. P. van Wezel. 2005. SsgA-like proteins determine the fate of peptidoglycan during sporulation of Streptomyces coelicolor. Mol. Microbiol. 58:929-944.
-
(2005)
Mol. Microbiol
, vol.58
, pp. 929-944
-
-
Noens, E.E.1
Mersinias, V.2
Traag, B.A.3
Smith, C.P.4
Koerten, H.K.5
van Wezel, G.P.6
-
320
-
-
33845974881
-
-
Normand, P., P. Lapierre, L. S. Tisa, J. P. Gogarten, N. Alloisio, E. Bagnarol, C. A. Bassi, A. M. Berry, D. M. Bickhart, N. Choisne, A. Couloux, B. Cournoyer, S. Cruveiller, V. Daubin, N. Demange, M. P. Francino, E. Goltsman, Y. Huang, O. R. Kopp, L. Labarre, A. Lapidus, C. Lavire, J. Marechal, M. Martinez, J. E. Mastronunzio, B. C. Mullin, J. Niemann, P. Pujic, T. Rawnsley, Z. Rouy, C. Schenowitz, A. Sellstedt, F. Tavares, J. P. Tomkins, D. Vallenet, C. Valverde, L. G. Wall, Y. Wang, C. Medigue, and D. R. Benson. 2007. Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography. Genome Res. 17:7-15.
-
Normand, P., P. Lapierre, L. S. Tisa, J. P. Gogarten, N. Alloisio, E. Bagnarol, C. A. Bassi, A. M. Berry, D. M. Bickhart, N. Choisne, A. Couloux, B. Cournoyer, S. Cruveiller, V. Daubin, N. Demange, M. P. Francino, E. Goltsman, Y. Huang, O. R. Kopp, L. Labarre, A. Lapidus, C. Lavire, J. Marechal, M. Martinez, J. E. Mastronunzio, B. C. Mullin, J. Niemann, P. Pujic, T. Rawnsley, Z. Rouy, C. Schenowitz, A. Sellstedt, F. Tavares, J. P. Tomkins, D. Vallenet, C. Valverde, L. G. Wall, Y. Wang, C. Medigue, and D. R. Benson. 2007. Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography. Genome Res. 17:7-15.
-
-
-
-
321
-
-
33645221999
-
The nature and dynamics of bacterial genomes
-
Ochman, H., and L. M. Davalos. 2006. The nature and dynamics of bacterial genomes. Science 311:1730-1733.
-
(2006)
Science
, vol.311
, pp. 1730-1733
-
-
Ochman, H.1
Davalos, L.M.2
-
322
-
-
0034682335
-
Lateral gene transfer and the nature of bacterial innovation
-
Ochman, H., J. G. Lawrence, and E. A. Groisman. 2000. Lateral gene transfer and the nature of bacterial innovation. Nature 405:299-304.
-
(2000)
Nature
, vol.405
, pp. 299-304
-
-
Ochman, H.1
Lawrence, J.G.2
Groisman, E.A.3
-
323
-
-
0035843908
-
Genes lost and genes found: Evolution of bacterial pathogenesis and symbiosis
-
Ochman, H., and N. A. Moran. 2001. Genes lost and genes found: evolution of bacterial pathogenesis and symbiosis. Science 292:1096-1099.
-
(2001)
Science
, vol.292
, pp. 1096-1099
-
-
Ochman, H.1
Moran, N.A.2
-
324
-
-
0036161274
-
A novel methodology employing Corynebacterium glutamicum genome information to generate a new L-lysine-producing mutant
-
Ohnishi, J., S. Mitsuhashi, M. Hayashi, S. Ando, H. Yokoi, K. Ochiai, and M. Ikeda. 2002. A novel methodology employing Corynebacterium glutamicum genome information to generate a new L-lysine-producing mutant. Appl. Microbiol. Biotechnol. 58:217-223.
-
(2002)
Appl. Microbiol. Biotechnol
, vol.58
, pp. 217-223
-
-
Ohnishi, J.1
Mitsuhashi, S.2
Hayashi, M.3
Ando, S.4
Yokoi, H.5
Ochiai, K.6
Ikeda, M.7
-
325
-
-
0035834039
-
Genome sequence of an industrial microorganism Streptomyces avermitilis: Deducing the ability of producing secondary metabolites
-
Omura, S., H. Ikeda, J. Ishikawa, A. Hanamoto, C. Takahashi, M. Shinose, Y. Takahashi, H. Horikawa, H. Nakazawa, T. Osonoe, H. Kikuchi, T. Shiba, Y. Sakaki, and M. Hattori. 2001. Genome sequence of an industrial microorganism Streptomyces avermitilis: deducing the ability of producing secondary metabolites. Proc. Natl. Acad. Sci. USA 98:12215-12220.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 12215-12220
-
-
Omura, S.1
Ikeda, H.2
Ishikawa, J.3
Hanamoto, A.4
Takahashi, C.5
Shinose, M.6
Takahashi, Y.7
Horikawa, H.8
Nakazawa, H.9
Osonoe, T.10
Kikuchi, H.11
Shiba, T.12
Sakaki, Y.13
Hattori, M.14
-
326
-
-
0031036762
-
Purification and characterization of galactooligosaccharide-producing beta-galactosidase from Sirobasidium magnum
-
Onishi, N., and T. Tanaka. 1997. Purification and characterization of galactooligosaccharide-producing beta-galactosidase from Sirobasidium magnum. Lett. Appl. Microbiol. 24:82-86.
-
(1997)
Lett. Appl. Microbiol
, vol.24
, pp. 82-86
-
-
Onishi, N.1
Tanaka, T.2
-
327
-
-
1842536410
-
Analysis of genes that encode DtxR-like transcriptional regulators in pathogenic and saprophytic corynebacterial species
-
Oram, D. M., A. Avdalovic, and R. K. Holmes. 2004. Analysis of genes that encode DtxR-like transcriptional regulators in pathogenic and saprophytic corynebacterial species. Infect. Immun. 72:1885-1895.
-
(2004)
Infect. Immun
, vol.72
, pp. 1885-1895
-
-
Oram, D.M.1
Avdalovic, A.2
Holmes, R.K.3
-
328
-
-
0032934709
-
Molecular characterisation of a 5.75-kb cryptic plasmid from Bifidobacterium breve NCFB 2258 and determination of mode of replication
-
O'Riordan, K., and G. F. Fitzgerald. 1999. Molecular characterisation of a 5.75-kb cryptic plasmid from Bifidobacterium breve NCFB 2258 and determination of mode of replication. FEMS Microbiol. Lett. 174:285-294.
-
(1999)
FEMS Microbiol. Lett
, vol.174
, pp. 285-294
-
-
O'Riordan, K.1
Fitzgerald, G.F.2
-
329
-
-
23744499671
-
Corynebacterium resistens sp. nov., a new multidrug-resistant coryneform bacterium isolated from human infections
-
Otsuka, Y., Y. Kawamura, T. Koyama, H. Iihara, K. Ohkusu, and T. Ezaki. 2005. Corynebacterium resistens sp. nov., a new multidrug-resistant coryneform bacterium isolated from human infections. J. Clin. Microbiol. 43:3713-3717.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 3713-3717
-
-
Otsuka, Y.1
Kawamura, Y.2
Koyama, T.3
Iihara, H.4
Ohkusu, K.5
Ezaki, T.6
-
331
-
-
0031745876
-
Recombination between the linear plasmid pPZG10 and the linear chromosome of Streptomyces rimosus can lead to exchange of ends
-
Pandza, S., G. Biukovic, A. Paravic, A. Dadbin, J. Cullum, and D. Hranueli. 1998. Recombination between the linear plasmid pPZG10 and the linear chromosome of Streptomyces rimosus can lead to exchange of ends. Mol. Microbiol. 28:1165-1176.
-
(1998)
Mol. Microbiol
, vol.28
, pp. 1165-1176
-
-
Pandza, S.1
Biukovic, G.2
Paravic, A.3
Dadbin, A.4
Cullum, J.5
Hranueli, D.6
-
332
-
-
2142711569
-
Genome analyses of Streptomyces peucetius ATCC 27952 for the identification and comparison of cytochrome P450 complement with other Streptomyces
-
Parajuli, N., D. B. Basnet, H. Chan Lee, J. K. Sohng, and K. Liou. 2004. Genome analyses of Streptomyces peucetius ATCC 27952 for the identification and comparison of cytochrome P450 complement with other Streptomyces. Arch. Biochem. Biophys. 425:233-241.
-
(2004)
Arch. Biochem. Biophys
, vol.425
, pp. 233-241
-
-
Parajuli, N.1
Basnet, D.B.2
Chan Lee, H.3
Sohng, J.K.4
Liou, K.5
-
333
-
-
0030850120
-
Isolation and characterization of two plasmids from Bifidobacterium longum
-
Park, M. S., K. H. Lee, and G. E. Ji. 1997. Isolation and characterization of two plasmids from Bifidobacterium longum. Lett. Appl. Microbiol. 25:5-7.
-
(1997)
Lett. Appl. Microbiol
, vol.25
, pp. 5-7
-
-
Park, M.S.1
Lee, K.H.2
Ji, G.E.3
-
334
-
-
0033056837
-
Sequence analysis of plasmid pKJ50 from Bifidobacterium longum
-
Park, M. S., D. W. Shin, K. H. Lee, and G. E. Ji. 1999. Sequence analysis of plasmid pKJ50 from Bifidobacterium longum. Microbiology 145:585-592.
-
(1999)
Microbiology
, vol.145
, pp. 585-592
-
-
Park, M.S.1
Shin, D.W.2
Lee, K.H.3
Ji, G.E.4
-
335
-
-
0035807385
-
-
Parkhill, J., B. W. Wren, N. R. Thomson, R. W. Titball, M. T. Holden, M. B. Prentice, M. Sebaihia, K. D. James, C. Churcher, K. L. Mungall, S. Baker, D. Basham, S. D. Bentley, K. Brooks, A. M. Cerdeno-Tarraga, T. Chillingworth, A. Cronin, R. M. Davies, P. Davis, G. Dougan, T. Feltwell, N. Hamlin, S. Holroyd, K. Jagels, A. V. Karlyshev, S. Leather, S. Moule, P. C. Oyston, M. Quail, K. Rutherford, M. Simmonds, J. Skelton, K. Stevens, S. Whitehead, and B. G. Barrell. 2001. Genome sequence of Yersinia pestis, the causative agent of plague. Nature 413:523-527.
-
Parkhill, J., B. W. Wren, N. R. Thomson, R. W. Titball, M. T. Holden, M. B. Prentice, M. Sebaihia, K. D. James, C. Churcher, K. L. Mungall, S. Baker, D. Basham, S. D. Bentley, K. Brooks, A. M. Cerdeno-Tarraga, T. Chillingworth, A. Cronin, R. M. Davies, P. Davis, G. Dougan, T. Feltwell, N. Hamlin, S. Holroyd, K. Jagels, A. V. Karlyshev, S. Leather, S. Moule, P. C. Oyston, M. Quail, K. Rutherford, M. Simmonds, J. Skelton, K. Stevens, S. Whitehead, and B. G. Barrell. 2001. Genome sequence of Yersinia pestis, the causative agent of plague. Nature 413:523-527.
-
-
-
-
336
-
-
0028842827
-
Phylogenetic analysis of the genus Corynebacterium based on 16S rRNA gene sequences
-
Pascual, C., P. A. Lawson, J. A. Farrow, M. N. Gimenez, and M. D. Collins. 1995. Phylogenetic analysis of the genus Corynebacterium based on 16S rRNA gene sequences. Int. J. Syst. Bacteriol. 45:724-728.
-
(1995)
Int. J. Syst. Bacteriol
, vol.45
, pp. 724-728
-
-
Pascual, C.1
Lawson, P.A.2
Farrow, J.A.3
Gimenez, M.N.4
Collins, M.D.5
-
337
-
-
0037453742
-
Origins of highly mosaic mycobacteriophage genomes
-
Pedulla, M. L., M. E. Ford, J. M. Houtz, T. Karthikeyan, C. Wadsworth, J. A. Lewis, D. Jacobs-Sera, J. Falbo, J. Gross, N. R. Pannunzio, W. Brucker, V. Kumar, J. Kandasamy, L. Keenan, S. Bardarov, J. Kriakov, J. G. Lawrence, W. R. Jacobs, Jr., R. W. Hendrix, and G. F. Hatfull. 2003. Origins of highly mosaic mycobacteriophage genomes. Cell 113:171-182.
-
(2003)
Cell
, vol.113
, pp. 171-182
-
-
Pedulla, M.L.1
Ford, M.E.2
Houtz, J.M.3
Karthikeyan, T.4
Wadsworth, C.5
Lewis, J.A.6
Jacobs-Sera, D.7
Falbo, J.8
Gross, J.9
Pannunzio, N.R.10
Brucker, W.11
Kumar, V.12
Kandasamy, J.13
Keenan, L.14
Bardarov, S.15
Kriakov, J.16
Lawrence, J.G.17
Jacobs Jr., W.R.18
Hendrix, R.W.19
Hatfull, G.F.20
more..
-
338
-
-
0037385757
-
Genus-specific protein binding to the large clusters of DNA repeats (short regularly spaced repeats) present in Sulfolobus genomes
-
Peng, X., K. Brugger, B. Shen, L. Chen, Q. She, and R. A. Garrett. 2003. Genus-specific protein binding to the large clusters of DNA repeats (short regularly spaced repeats) present in Sulfolobus genomes. J. Bacteriol. 185:2410-2417.
-
(2003)
J. Bacteriol
, vol.185
, pp. 2410-2417
-
-
Peng, X.1
Brugger, K.2
Shen, B.3
Chen, L.4
She, Q.5
Garrett, R.A.6
-
339
-
-
0344906214
-
Surface properties of bifidobacterial strains of human origin
-
Perez, P. F., Y. Minnaard, E. A. Disalvo, and G. L. De Antoni. 1998. Surface properties of bifidobacterial strains of human origin. Appl. Environ. Microbiol. 64:21-26.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 21-26
-
-
Perez, P.F.1
Minnaard, Y.2
Disalvo, E.A.3
De Antoni, G.L.4
-
340
-
-
4544346542
-
Isolation of Mycobacterium tuberculosis mutants defective in the arrest of phagosome maturation
-
Pethe, K., D. L. Swenson, S. Alonso, J. Anderson, C. Wang, and D. G. Russell. 2004. Isolation of Mycobacterium tuberculosis mutants defective in the arrest of phagosome maturation. Proc. Natl. Acad. Sci. USA 101:13642-13647.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 13642-13647
-
-
Pethe, K.1
Swenson, D.L.2
Alonso, S.3
Anderson, J.4
Wang, C.5
Russell, D.G.6
-
341
-
-
33749260145
-
Genetics of Streptomyces rimosus, the oxytetracycline producer
-
Petkovic, H., J. Cullum, D. Hranueli, I. S. Hunter, N. Peric-Concha, J. Pigac, A. Thamchaipenet, D. Vujaklija, and P. F. Long. 2006. Genetics of Streptomyces rimosus, the oxytetracycline producer. Microbiol. Mol. Biol. Rev. 70:704-728.
-
(2006)
Microbiol. Mol. Biol. Rev
, vol.70
, pp. 704-728
-
-
Petkovic, H.1
Cullum, J.2
Hranueli, D.3
Hunter, I.S.4
Peric-Concha, N.5
Pigac, J.6
Thamchaipenet, A.7
Vujaklija, D.8
Long, P.F.9
-
342
-
-
0038039713
-
Eukaryotic-type protein kinases in Streptomyces coelicolor: Variations on a common theme
-
Petrickova, K., and M. Petricek. 2003. Eukaryotic-type protein kinases in Streptomyces coelicolor: variations on a common theme. Microbiology 149:1609-1621.
-
(2003)
Microbiology
, vol.149
, pp. 1609-1621
-
-
Petrickova, K.1
Petricek, M.2
-
343
-
-
0242354974
-
Horizontal gene transfer and phylogenetics
-
Philippe, H., and C. J. Douady. 2003. Horizontal gene transfer and phylogenetics. Curr. Opin. Microbiol. 6:498-505.
-
(2003)
Curr. Opin. Microbiol
, vol.6
, pp. 498-505
-
-
Philippe, H.1
Douady, C.J.2
-
344
-
-
0031854398
-
Mycobacterial linear plasmids have an invertron-like structure related to other linear replicons in actinomycetes
-
Picardeau, M., and V. Vincent. 1998. Mycobacterial linear plasmids have an invertron-like structure related to other linear replicons in actinomycetes. Microbiology 144:1981-1988.
-
(1998)
Microbiology
, vol.144
, pp. 1981-1988
-
-
Picardeau, M.1
Vincent, V.2
-
345
-
-
0025143094
-
An investigation of nosocomial infection with Corynebacterium jeikeium in surgical patients using a ribosomal RNA gene probe
-
Pitcher, D., A. Johnson, F. Allerberger, N. Woodford, and R. George. 1990. An investigation of nosocomial infection with Corynebacterium jeikeium in surgical patients using a ribosomal RNA gene probe. Eur. J. Clin. Microbiol. Infect. Dis. 9:643-648.
-
(1990)
Eur. J. Clin. Microbiol. Infect. Dis
, vol.9
, pp. 643-648
-
-
Pitcher, D.1
Johnson, A.2
Allerberger, F.3
Woodford, N.4
George, R.5
-
346
-
-
0035725238
-
The integrative element pSAM2 from Streptomyces: Kinetics and mode of conjugal transfer
-
Possoz, C., C. Ribard, J. Gagnat, J. L. Pemodet, and M. Guerineau. 2001. The integrative element pSAM2 from Streptomyces: kinetics and mode of conjugal transfer. Mol. Microbiol. 42:159-166.
-
(2001)
Mol. Microbiol
, vol.42
, pp. 159-166
-
-
Possoz, C.1
Ribard, C.2
Gagnat, J.3
Pemodet, J.L.4
Guerineau, M.5
-
347
-
-
0029842411
-
Occurrence of plasmids in pathogenic strains of Nocardia
-
Provost, F., M. V. Blanc, B. L. Beaman, and P. Boiron. 1996. Occurrence of plasmids in pathogenic strains of Nocardia. J. Med. Microbiol. 45:344-348.
-
(1996)
J. Med. Microbiol
, vol.45
, pp. 344-348
-
-
Provost, F.1
Blanc, M.V.2
Beaman, B.L.3
Boiron, P.4
-
348
-
-
0029908527
-
Fastidious xylem-limited bacterial plant pathogens
-
Purcell, A. H., and D. L. Hopkins. 1996. Fastidious xylem-limited bacterial plant pathogens. Annu. Rev. Phytopathol. 34:131-151.
-
(1996)
Annu. Rev. Phytopathol
, vol.34
, pp. 131-151
-
-
Purcell, A.H.1
Hopkins, D.L.2
-
349
-
-
1242335920
-
Whole proteome prokaryote phylogeny without sequence alignment: A K-string composition approach
-
Qi, J., B. Wang, and B. I. Hao. 2004. Whole proteome prokaryote phylogeny without sequence alignment: a K-string composition approach. J. Mol. Evol. 58:1-11.
-
(2004)
J. Mol. Evol
, vol.58
, pp. 1-11
-
-
Qi, J.1
Wang, B.2
Hao, B.I.3
-
350
-
-
0028144569
-
Analysis of the replication region of a mycobacterial plasmid, pMSC262
-
Qin, M., H. Taniguchi, and Y. Mizuguchi. 1994. Analysis of the replication region of a mycobacterial plasmid, pMSC262. J. Bacteriol. 176:419-425.
-
(1994)
J. Bacteriol
, vol.176
, pp. 419-425
-
-
Qin, M.1
Taniguchi, H.2
Mizuguchi, Y.3
-
351
-
-
0032807328
-
Characterization of the functional replication origin of Mycobacterium tuberculosis
-
Qin, M. H., M. V. Madiraju, and M. Rajagopalan. 1999. Characterization of the functional replication origin of Mycobacterium tuberculosis. Gene 233:121-130.
-
(1999)
Gene
, vol.233
, pp. 121-130
-
-
Qin, M.H.1
Madiraju, M.V.2
Rajagopalan, M.3
-
352
-
-
0025734735
-
Construction and characterization of a Mycobacterium-Escherichia coli shuttle vector
-
Radford, A. J., and A. L. Hodgson. 1991. Construction and characterization of a Mycobacterium-Escherichia coli shuttle vector. Plasmid 25:149-153.
-
(1991)
Plasmid
, vol.25
, pp. 149-153
-
-
Radford, A.J.1
Hodgson, A.L.2
-
353
-
-
33748780411
-
Mapping essential domains of Mycobacterium smegmatis WhmD: Insights into WhiB structure and function
-
Raghunand, T. R., and W. R. Bishai. 2006. Mapping essential domains of Mycobacterium smegmatis WhmD: insights into WhiB structure and function. J. Bacteriol. 188:6966-6976.
-
(2006)
J. Bacteriol
, vol.188
, pp. 6966-6976
-
-
Raghunand, T.R.1
Bishai, W.R.2
-
354
-
-
0034717008
-
Granuloma-specific expression of Mycobacterium virulence proteins from the glycine-rich PE-PGRS family
-
Ramakrishnan, L., N. A. Federspiel, and S. Falkow. 2000. Granuloma-specific expression of Mycobacterium virulence proteins from the glycine-rich PE-PGRS family. Science 288:1436-1439.
-
(2000)
Science
, vol.288
, pp. 1436-1439
-
-
Ramakrishnan, L.1
Federspiel, N.A.2
Falkow, S.3
-
355
-
-
0034594873
-
Cultivation of the bacillus of Whipple's disease
-
Raoult, D., M. L. Birg, B. La Scola, P. E. Foumier, M. Enea, H. Lepidi, V. Roux, J. C. Piette, F. Vandenesch, D. Vital-Durand, and T. J. Marrie. 2000. Cultivation of the bacillus of Whipple's disease. N. Engl. J. Med. 342:620-625.
-
(2000)
N. Engl. J. Med
, vol.342
, pp. 620-625
-
-
Raoult, D.1
Birg, M.L.2
La Scola, B.3
Foumier, P.E.4
Enea, M.5
Lepidi, H.6
Roux, V.7
Piette, J.C.8
Vandenesch, F.9
Vital-Durand, D.10
Marrie, T.J.11
-
356
-
-
0035961556
-
Culture and immunological detection of Tropheryma whippelii from the duodenum of a patient with Whipple disease
-
Raoult, D., B. La Scola, P. Lecocq, H. Lepidi, and P. E. Fournier. 2001. Culture and immunological detection of Tropheryma whippelii from the duodenum of a patient with Whipple disease. JAMA 285:1039-1043.
-
(2001)
JAMA
, vol.285
, pp. 1039-1043
-
-
Raoult, D.1
La Scola, B.2
Lecocq, P.3
Lepidi, H.4
Fournier, P.E.5
-
357
-
-
17944375495
-
Tropheryma whipplei circulating in blood monocytes
-
Raoult, D., H. Lepidi, and J. R. Harle. 2001. Tropheryma whipplei circulating in blood monocytes. N. Engl. J. Med. 345:548.
-
(2001)
N. Engl. J. Med
, vol.345
, pp. 548
-
-
Raoult, D.1
Lepidi, H.2
Harle, J.R.3
-
358
-
-
0043026766
-
Tropheryma whipplei Twist: A human pathogenic Actinobacteria with a reduced genome
-
Raoult, D., H. Ogata, S. Audic, C. Robert, K. Suhre, M. Drancourt, and J. M. Claverie. 2003. Tropheryma whipplei Twist: a human pathogenic Actinobacteria with a reduced genome. Genome Res. 13:1800-1809.
-
(2003)
Genome Res
, vol.13
, pp. 1800-1809
-
-
Raoult, D.1
Ogata, H.2
Audic, S.3
Robert, C.4
Suhre, K.5
Drancourt, M.6
Claverie, J.M.7
-
359
-
-
0040162268
-
The mycobacteria: An introduction to nomenclature and pathogenesis
-
Rastogi, N., E. Legrand, and C. Sola. 2001. The mycobacteria: an introduction to nomenclature and pathogenesis. Rev. Sci. Tech. 20:21-54.
-
(2001)
Rev. Sci. Tech
, vol.20
, pp. 21-54
-
-
Rastogi, N.1
Legrand, E.2
Sola, C.3
-
360
-
-
0030608954
-
A tRNA(2Arg) gene of Corynebacterium diphtheriae is the chromosomal integration site for toxinogenic bacteriophages
-
Ratti, G., A. Covacci, and R. Rappuoli. 1997. A tRNA(2Arg) gene of Corynebacterium diphtheriae is the chromosomal integration site for toxinogenic bacteriophages. Mol. Microbiol. 25:1179-1181.
-
(1997)
Mol. Microbiol
, vol.25
, pp. 1179-1181
-
-
Ratti, G.1
Covacci, A.2
Rappuoli, R.3
-
361
-
-
0034038207
-
Cloning and sequence analysis of the mercury resistance operon of Streptomyces sp. strain CHR28 reveals a novel putative second regulatory gene
-
Ravel, J., J. DiRuggiero, F. T. Robb, and R. T. Hill. 2000. Cloning and sequence analysis of the mercury resistance operon of Streptomyces sp. strain CHR28 reveals a novel putative second regulatory gene. J. Bacteriol. 182:2345-2349.
-
(2000)
J. Bacteriol
, vol.182
, pp. 2345-2349
-
-
Ravel, J.1
DiRuggiero, J.2
Robb, F.T.3
Hill, R.T.4
-
362
-
-
0041309765
-
Leifsonia rubra sp. nov. and Leifsonia aurea sp. nov., psychrophiles from a pond in Antarctica
-
Reddy, G. S., J. S. Prakash, R. Srinivas, G. I. Matsumoto, and S. Shivaji. 2003. Leifsonia rubra sp. nov. and Leifsonia aurea sp. nov., psychrophiles from a pond in Antarctica. Int. J. Syst. Evol. Microbiol. 53:977-984.
-
(2003)
Int. J. Syst. Evol. Microbiol
, vol.53
, pp. 977-984
-
-
Reddy, G.S.1
Prakash, J.S.2
Srinivas, R.3
Matsumoto, G.I.4
Shivaji, S.5
-
363
-
-
0034451879
-
Chromosome topology and genome size of selected actinomycetes species
-
Redenbach, M., J. Scheel, and U. Schmidt. 2000. Chromosome topology and genome size of selected actinomycetes species. Antonie Leeuwenhoek 78:227-235.
-
(2000)
Antonie Leeuwenhoek
, vol.78
, pp. 227-235
-
-
Redenbach, M.1
Scheel, J.2
Schmidt, U.3
-
364
-
-
0025211362
-
Characterization of Propionibacterium plasmids
-
Rehberger, T. G., and B. A. Glatz. 1990. Characterization of Propionibacterium plasmids. Appl. Environ. Microbiol. 56:864-871.
-
(1990)
Appl. Environ. Microbiol
, vol.56
, pp. 864-871
-
-
Rehberger, T.G.1
Glatz, B.A.2
-
365
-
-
15844404772
-
Characterization and sequencing of a respiratory burst-inhibiting acid phosphatase from Francisella tularensis
-
Reilly, T. J., G. S. Baron, F. E. Nano, and M. S. Kuhlenschmidt. 1996. Characterization and sequencing of a respiratory burst-inhibiting acid phosphatase from Francisella tularensis. J. Biol. Chem. 271:10973-10983.
-
(1996)
J. Biol. Chem
, vol.271
, pp. 10973-10983
-
-
Reilly, T.J.1
Baron, G.S.2
Nano, F.E.3
Kuhlenschmidt, M.S.4
-
366
-
-
85135545362
-
-
Ren, Q., and I. T. Paulsen. 2005. Comparative analyses of fundamental differences in membrane transport capabilities in prokaryotes and eukaryotes. PLoS Comput. Biol. 1:e27.
-
Ren, Q., and I. T. Paulsen. 2005. Comparative analyses of fundamental differences in membrane transport capabilities in prokaryotes and eukaryotes. PLoS Comput. Biol. 1:e27.
-
-
-
-
367
-
-
0043237947
-
Genome-based design of a cell-free culture medium for Tropheryma whipplei
-
Renesto, P., N. Crapoulet, H. Ogata, B. La Scola, G. Vestris, J. M. Claverie, and D. Raoult. 2003. Genome-based design of a cell-free culture medium for Tropheryma whipplei. Lancet 362:447-449.
-
(2003)
Lancet
, vol.362
, pp. 447-449
-
-
Renesto, P.1
Crapoulet, N.2
Ogata, H.3
La Scola, B.4
Vestris, G.5
Claverie, J.M.6
Raoult, D.7
-
368
-
-
0037077299
-
Conclusive evidence that the major T-cell antigens of the Mycobacterium tuberculosis complex ESAT-6 and CFP-10 form a tight, 1:1 complex and characterization of the structural properties of ESAT-6, CFP-10, and the ESAT-6*CFP-10 complex. Implications for pathogenesis and virulence
-
Renshaw, P. S., P. Panagiotidou, A. Whelan, S. V. Gordon, R. G. Hewinson, R. A. Williamson, and M. D. Carr. 2002. Conclusive evidence that the major T-cell antigens of the Mycobacterium tuberculosis complex ESAT-6 and CFP-10 form a tight, 1:1 complex and characterization of the structural properties of ESAT-6, CFP-10, and the ESAT-6*CFP-10 complex. Implications for pathogenesis and virulence. J. Biol. Chem. 277:21598- 21603.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 21598-21603
-
-
Renshaw, P.S.1
Panagiotidou, P.2
Whelan, A.3
Gordon, S.V.4
Hewinson, R.G.5
Williamson, R.A.6
Carr, M.D.7
-
369
-
-
32344450770
-
Isolation of Corynebacterium tuscaniae sp. nov. from blood cultures of a patient with endocarditis
-
Riegel, P., R. Creti, R. Mattei, A. Nieri, and C. von Hunolstein. 2006. Isolation of Corynebacterium tuscaniae sp. nov. from blood cultures of a patient with endocarditis. J. Clin. Microbiol. 44:307-312.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 307-312
-
-
Riegel, P.1
Creti, R.2
Mattei, R.3
Nieri, A.4
von Hunolstein, C.5
-
370
-
-
0036406590
-
Bacteriocins: Evolution, ecology, and application
-
Riley, M. A., and J. E. Wertz. 2002. Bacteriocins: evolution, ecology, and application. Annu. Rev. Microbiol. 56:117-137.
-
(2002)
Annu. Rev. Microbiol
, vol.56
, pp. 117-137
-
-
Riley, M.A.1
Wertz, J.E.2
-
371
-
-
0035150527
-
Prebiotics: Preferential substrates for specific germs?
-
Roberfroid, M. B. 2001. Prebiotics: preferential substrates for specific germs? Am. J. Clin. Nutr. 73:406S-409S.
-
(2001)
Am. J. Clin. Nutr
, vol.73
-
-
Roberfroid, M.B.1
-
372
-
-
0242380287
-
DNA repeats lead to the accelerated loss of gene order in bacteria
-
Rocha, E. P. 2003. DNA repeats lead to the accelerated loss of gene order in bacteria. Trends Genet. 19:600-603.
-
(2003)
Trends Genet
, vol.19
, pp. 600-603
-
-
Rocha, E.P.1
-
373
-
-
1342300599
-
Environmental genomics, the big picture?
-
Rodriguez-Valera, F. 2004. Environmental genomics, the big picture? FEMS Microbiol. Lett. 231:153-158.
-
(2004)
FEMS Microbiol. Lett
, vol.231
, pp. 153-158
-
-
Rodriguez-Valera, F.1
-
374
-
-
0036330981
-
The phage proteomic tree: A genome-based taxonomy for phage
-
Rohwer, F., and R. Edwards. 2002. The phage proteomic tree: a genome-based taxonomy for phage. J. Bacteriol. 184:4529-4535.
-
(2002)
J. Bacteriol
, vol.184
, pp. 4529-4535
-
-
Rohwer, F.1
Edwards, R.2
-
375
-
-
0242365676
-
Genome-scale approaches to resolving incongruence in molecular phylogenies
-
Rokas, A., B. L. Williams, N. King, and S. B. Carroll. 2003. Genome-scale approaches to resolving incongruence in molecular phylogenies. Nature 425:798-804.
-
(2003)
Nature
, vol.425
, pp. 798-804
-
-
Rokas, A.1
Williams, B.L.2
King, N.3
Carroll, S.B.4
-
376
-
-
0026769090
-
Gram-positive bacteria with a high DNA G+C content are characterized by a common insertion within their 23S rRNA genes
-
Roller, C., W. Ludwig, and K. H. Schleifer. 1992. Gram-positive bacteria with a high DNA G+C content are characterized by a common insertion within their 23S rRNA genes. J. Gen. Microbiol. 138:1167-1175.
-
(1992)
J. Gen. Microbiol
, vol.138
, pp. 1167-1175
-
-
Roller, C.1
Ludwig, W.2
Schleifer, K.H.3
-
377
-
-
33646855789
-
Horizontal transfer of a virulence operon to the ancestor of Mycobacterium tuberculosis
-
Rosas-Magallanes, V., P. Deschavanne, L. Quintana-Murci, R. Brosch, B. Gicquel, and O. Neyrolles. 2006. Horizontal transfer of a virulence operon to the ancestor of Mycobacterium tuberculosis. Mol. Biol. Evol 23:1129-1135.
-
(2006)
Mol. Biol. Evol
, vol.23
, pp. 1129-1135
-
-
Rosas-Magallanes, V.1
Deschavanne, P.2
Quintana-Murci, L.3
Brosch, R.4
Gicquel, B.5
Neyrolles, O.6
-
379
-
-
0029923078
-
-
Rossi, M., P. Brigidi, A. Gonzalez Vara y Rodriguez, and D. Matteuzzi. 1996. Characterization of the plasmid pMB1 from Bifidobacterium longum and its use for shuttle vector construction. Res. Microbiol. 147:133-143.
-
Rossi, M., P. Brigidi, A. Gonzalez Vara y Rodriguez, and D. Matteuzzi. 1996. Characterization of the plasmid pMB1 from Bifidobacterium longum and its use for shuttle vector construction. Res. Microbiol. 147:133-143.
-
-
-
-
380
-
-
33747360729
-
Screening for and identification of starch-, amylopectin-, and pullulan-degrading activities in bifidobacterial strains
-
Ryan, S. M., G. F. Fitzgerald, and D. van Sinderen. 2006. Screening for and identification of starch-, amylopectin-, and pullulan-degrading activities in bifidobacterial strains. Appl. Environ. Microbiol. 72:5289-5296.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 5289-5296
-
-
Ryan, S.M.1
Fitzgerald, G.F.2
van Sinderen, D.3
-
381
-
-
22144456095
-
Transcriptional regulation and characterization of a novel beta- fructofuranosidase-encoding gene from Bifidobacterium breve UCC2003
-
Ryan, S. M., G. F. Fitzgerald, and D. van Sinderen. 2005. Transcriptional regulation and characterization of a novel beta- fructofuranosidase-encoding gene from Bifidobacterium breve UCC2003. Appl. Environ. Microbiol. 71:3475-3482.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 3475-3482
-
-
Ryan, S.M.1
Fitzgerald, G.F.2
van Sinderen, D.3
-
382
-
-
0032517137
-
Skewed oligomers and origins of replication
-
Salzberg, S. L., A. J. Salzberg, A. R. Kerlavage, and J. F. Tomb. 1998. Skewed oligomers and origins of replication. Gene 217:57-67.
-
(1998)
Gene
, vol.217
, pp. 57-67
-
-
Salzberg, S.L.1
Salzberg, A.J.2
Kerlavage, A.R.3
Tomb, J.F.4
-
383
-
-
0028118548
-
Increased fertility of Corynebacterium glutamicum recipients in intergeneric matings with Escherichia coli after stress exposure
-
Schafer, A., J. Kalinowski, and A. Puhler. 1994. Increased fertility of Corynebacterium glutamicum recipients in intergeneric matings with Escherichia coli after stress exposure. Appl. Environ. Microbiol. 60:756-759.
-
(1994)
Appl. Environ. Microbiol
, vol.60
, pp. 756-759
-
-
Schafer, A.1
Kalinowski, J.2
Puhler, A.3
-
384
-
-
0027945563
-
Cloning and characterization of a DNA region encoding a stress-sensitive restriction system from Corynebacterium glutamicum ATCC 13032 and analysis of its role in intergeneric conjugation with Escherichia coli
-
Schafer, A., A. Schwarzer, J. Kalinowski, and A. Puhler. 1994. Cloning and characterization of a DNA region encoding a stress-sensitive restriction system from Corynebacterium glutamicum ATCC 13032 and analysis of its role in intergeneric conjugation with Escherichia coli. J. Bacteriol. 176:7309-7319.
-
(1994)
J. Bacteriol
, vol.176
, pp. 7309-7319
-
-
Schafer, A.1
Schwarzer, A.2
Kalinowski, J.3
Puhler, A.4
-
385
-
-
0037195083
-
The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract
-
Schell, M. A., M. Karmirantzou, B. Snel, D. Vilanova, B. Berger, G. Pessi, M. C. Zwahlen, F. Desiere, P. Bork, M. Delley, R. D. Pridmore, and F. Arigoni. 2002. The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract. Proc. Natl. Acad. Sci. USA 99:14422-14427.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 14422-14427
-
-
Schell, M.A.1
Karmirantzou, M.2
Snel, B.3
Vilanova, D.4
Berger, B.5
Pessi, G.6
Zwahlen, M.C.7
Desiere, F.8
Bork, P.9
Delley, M.10
Pridmore, R.D.11
Arigoni, F.12
-
386
-
-
0019272450
-
Plasmids in Corynebacterium diphtheriae and diphtheroids mediating erythromycin resistance
-
Schiller, J., N. Groman, and M. Coyle. 1980. Plasmids in Corynebacterium diphtheriae and diphtheroids mediating erythromycin resistance. Antimicrob. Agents Chemother. 18:814-821.
-
(1980)
Antimicrob. Agents Chemother
, vol.18
, pp. 814-821
-
-
Schiller, J.1
Groman, N.2
Coyle, M.3
-
387
-
-
0020973990
-
Relationship between pNG2, an Emr plasmid in Corynebacterium diphtheriae, and plasmids in aerobic skin coryneforms
-
Schiller, J., M. Strom, N. Groman, and M. Coyle. 1983. Relationship between pNG2, an Emr plasmid in Corynebacterium diphtheriae, and plasmids in aerobic skin coryneforms. Antimicrob. Agents Chemother. 24:892-901.
-
(1983)
Antimicrob. Agents Chemother
, vol.24
, pp. 892-901
-
-
Schiller, J.1
Strom, M.2
Groman, N.3
Coyle, M.4
-
388
-
-
0033804123
-
Duplicated gene clusters suggest an interplay of glycogen and trehalose metabolism during sequential stages of aerial mycelium development in Streptomyces coelicolor A3(2)
-
Schneider, D., C. J. Bruton, and K. F. Chater. 2000. Duplicated gene clusters suggest an interplay of glycogen and trehalose metabolism during sequential stages of aerial mycelium development in Streptomyces coelicolor A3(2). Mol. Gen. Genet. 263:543-553.
-
(2000)
Mol. Gen. Genet
, vol.263
, pp. 543-553
-
-
Schneider, D.1
Bruton, C.J.2
Chater, K.F.3
-
389
-
-
0344666688
-
Horizontal transfer of segments of the 16S rRNA genes between species of the Streptococcus anginosus group
-
Schouls, L. M., C. S. Schot, and J. A. Jacobs. 2003. Horizontal transfer of segments of the 16S rRNA genes between species of the Streptococcus anginosus group. J. Bacteriol. 185:7241-7246.
-
(2003)
J. Bacteriol
, vol.185
, pp. 7241-7246
-
-
Schouls, L.M.1
Schot, C.S.2
Jacobs, J.A.3
-
390
-
-
0035155684
-
Recognition and degradation of chitin by streptomycetes
-
Schrempf, H. 2001. Recognition and degradation of chitin by streptomycetes. Antonie Leeuwenhoek 79:285-289.
-
(2001)
Antonie Leeuwenhoek
, vol.79
, pp. 285-289
-
-
Schrempf, H.1
-
391
-
-
0023375319
-
Transformation of Corynebacterium diphtheriae, Corynebacterium ulcerans, Corynebacterium glutamicum, and Escherichia coli with the C. diphtheriae plasmid pNG2
-
Serwold-Davis, T. M., N. Groman, and M. Rabin. 1987. Transformation of Corynebacterium diphtheriae, Corynebacterium ulcerans, Corynebacterium glutamicum, and Escherichia coli with the C. diphtheriae plasmid pNG2. Proc. Natl. Acad. Sci. USA 84:4964-4968.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 4964-4968
-
-
Serwold-Davis, T.M.1
Groman, N.2
Rabin, M.3
-
392
-
-
0027320544
-
Rifampicin region revisited. New rifampicin-resistant and streptolydigin- resistant mutants in the beta subunit of Escherichia coli RNA polymerase
-
Severinov, K., M. Soushko, A. Goldfarb, and V. Nikiforov. 1993. Rifampicin region revisited. New rifampicin-resistant and streptolydigin- resistant mutants in the beta subunit of Escherichia coli RNA polymerase. J. Biol. Chem. 268:14820-14825.
-
(1993)
J. Biol. Chem
, vol.268
, pp. 14820-14825
-
-
Severinov, K.1
Soushko, M.2
Goldfarb, A.3
Nikiforov, V.4
-
394
-
-
15444352445
-
-
Shigemori, H., H. Komaki, K. Yazawa, Y. Mikami, A. Nemoto, Y. Tanaka, T. Sasaki, Y. In, T. Ishida, and J. Kobayashi. 1998. Brasilicardin A. A novel tricyclic metabolite with potent immunosuppressive activity from actinomycete Nocardia brasiliensis. J. Org. Chem. 63:6900-6904.
-
Shigemori, H., H. Komaki, K. Yazawa, Y. Mikami, A. Nemoto, Y. Tanaka, T. Sasaki, Y. In, T. Ishida, and J. Kobayashi. 1998. Brasilicardin A. A novel tricyclic metabolite with potent immunosuppressive activity from actinomycete Nocardia brasiliensis. J. Org. Chem. 63:6900-6904.
-
-
-
-
395
-
-
0034618559
-
Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS
-
Shigenobu, S., H. Watanabe, M. Hattori, Y. Sakaki, and H. Ishikawa. 2000. Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS. Nature 407:81-86.
-
(2000)
Nature
, vol.407
, pp. 81-86
-
-
Shigenobu, S.1
Watanabe, H.2
Hattori, M.3
Sakaki, Y.4
Ishikawa, H.5
-
396
-
-
0033562324
-
The complete genome sequence of the Streptomyces temperate phage straight phiC31: Evolutionary relationships to other viruses
-
Smith, M. C., R. N. Burns, S. E. Wilson, and M. A. Gregory. 1999. The complete genome sequence of the Streptomyces temperate phage straight phiC31: evolutionary relationships to other viruses. Nucleic Acids Res. 27:2145-2155.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 2145-2155
-
-
Smith, M.C.1
Burns, R.N.2
Wilson, S.E.3
Gregory, M.A.4
-
397
-
-
33749006231
-
Cluster of DnaA boxes involved in regulation of Streptomyces chromosome replication: From in silico to in vivo studies
-
Smulczyk-Krawczyszyn, A., D. Jakimowicz, B. Ruban-Osmialowska, A. Zawilak-Pawlik, J. Majka, K. Chater, and J. Zakrzewska-Czerwinska. 2006. Cluster of DnaA boxes involved in regulation of Streptomyces chromosome replication: from in silico to in vivo studies. J. Bacteriol. 188:6184-6194.
-
(2006)
J. Bacteriol
, vol.188
, pp. 6184-6194
-
-
Smulczyk-Krawczyszyn, A.1
Jakimowicz, D.2
Ruban-Osmialowska, B.3
Zawilak-Pawlik, A.4
Majka, J.5
Chater, K.6
Zakrzewska-Czerwinska, J.7
-
398
-
-
0032900532
-
Genome phylogeny based on gene content
-
Snel, B., P. Bork, and M. A. Huynen. 1999. Genome phylogeny based on gene content. Nat. Genet. 21:108-110.
-
(1999)
Nat. Genet
, vol.21
, pp. 108-110
-
-
Snel, B.1
Bork, P.2
Huynen, M.A.3
-
399
-
-
0036143446
-
Genomes in flux: The evolution of archaeal and proteobacterial gene content
-
Snel, B., P. Bork, and M. A. Huynen. 2002. Genomes in flux: the evolution of archaeal and proteobacterial gene content. Genome Res. 12:17-25.
-
(2002)
Genome Res
, vol.12
, pp. 17-25
-
-
Snel, B.1
Bork, P.2
Huynen, M.A.3
-
400
-
-
27144493223
-
Genome trees and the nature of genome evolution
-
Snel, B., M. A. Huynen, and B. E. Dutilh. 2005. Genome trees and the nature of genome evolution. Annu. Rev. Microbiol. 59:191-209.
-
(2005)
Annu. Rev. Microbiol
, vol.59
, pp. 191-209
-
-
Snel, B.1
Huynen, M.A.2
Dutilh, B.E.3
-
401
-
-
0033983745
-
Multiple paralogous genes related to the Streptomyces coelicolor developmental regulatory gene whiB are present in Streptomyces and other actinomycetes
-
Soliveri, J. A., J. Gomez, W. R. Bishai, and K. F. Chater. 2000. Multiple paralogous genes related to the Streptomyces coelicolor developmental regulatory gene whiB are present in Streptomyces and other actinomycetes. Microbiology 146:333-343.
-
(2000)
Microbiology
, vol.146
, pp. 333-343
-
-
Soliveri, J.A.1
Gomez, J.2
Bishai, W.R.3
Chater, K.F.4
-
402
-
-
0028966384
-
Purification and characterization of a low-molecular-mass T-cell antigen secreted by Mycobacterium tuberculosis
-
Sorensen, A. L., S. Nagai, G. Houen, P. Andersen, and A. B. Andersen. 1995. Purification and characterization of a low-molecular-mass T-cell antigen secreted by Mycobacterium tuberculosis. Infect. Immun. 63:1710-1717.
-
(1995)
Infect. Immun
, vol.63
, pp. 1710-1717
-
-
Sorensen, A.L.1
Nagai, S.2
Houen, G.3
Andersen, P.4
Andersen, A.B.5
-
403
-
-
0030931719
-
Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionary recent global dissemination
-
Sreevatsan, S., X. Pan, K. E. Stockbauer, N. D. Connell, B. N. Kreiswirth, T. S. Whittam, and J. M. Musser. 1997. Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionary recent global dissemination. Proc. Natl. Acad. Sci. USA 94:9869-9874.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 9869-9874
-
-
Sreevatsan, S.1
Pan, X.2
Stockbauer, K.E.3
Connell, N.D.4
Kreiswirth, B.N.5
Whittam, T.S.6
Musser, J.M.7
-
404
-
-
14744287528
-
Estimating and comparing the diversity of marine actinobacteria
-
Stach, J. E., and A. T. Bull. 2005. Estimating and comparing the diversity of marine actinobacteria. Antonie Leeuwenhoek 87:3-9.
-
(2005)
Antonie Leeuwenhoek
, vol.87
, pp. 3-9
-
-
Stach, J.E.1
Bull, A.T.2
-
406
-
-
0035989633
-
Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology
-
Stackebrandt, E., W. Frederiksen, G. M. Garrity, P. A. Grimont, P. Kampfer, M. C. Maiden, X. Nesme, R. Rossello-Mora, J. Swings, H. G. Truper, L. Vauterin, A. C. Ward, and W. B. Whitman. 2002. Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology. Int. J. Syst. Evol. Microbiol. 52:1043-1047.
-
(2002)
Int. J. Syst. Evol. Microbiol
, vol.52
, pp. 1043-1047
-
-
Stackebrandt, E.1
Frederiksen, W.2
Garrity, G.M.3
Grimont, P.A.4
Kampfer, P.5
Maiden, M.C.6
Nesme, X.7
Rossello-Mora, R.8
Swings, J.9
Truper, H.G.10
Vauterin, L.11
Ward, A.C.12
Whitman, W.B.13
-
407
-
-
0030833456
-
Phylogenetic analysis of the genus Desulfotomaculum: Evidence for the misclassification of Desulfotomaculum guttoideum and description of Desulfotomaculum orientis as Desulfosporosinus orientis gen. nov., comb. nov
-
Stackebrandt, E., C. Sproer, F. A. Rainey, J. Burghardt, O. Pauker, and H. Hippe. 1997. Phylogenetic analysis of the genus Desulfotomaculum: evidence for the misclassification of Desulfotomaculum guttoideum and description of Desulfotomaculum orientis as Desulfosporosinus orientis gen. nov., comb. nov. Int. J. Syst. Bacteriol. 47:1134-1139.
-
(1997)
Int. J. Syst. Bacteriol
, vol.47
, pp. 1134-1139
-
-
Stackebrandt, E.1
Sproer, C.2
Rainey, F.A.3
Burghardt, J.4
Pauker, O.5
Hippe, H.6
-
408
-
-
17044370477
-
Fermented functional foods based on probiotics and their biogenic metabolites
-
Stanton, C., R. P. Ross, G. F. Fitzgerald, and D. Van Sinderen. 2005. Fermented functional foods based on probiotics and their biogenic metabolites. Curr. Opin. Biotechnol. 16:198-203.
-
(2005)
Curr. Opin. Biotechnol
, vol.16
, pp. 198-203
-
-
Stanton, C.1
Ross, R.P.2
Fitzgerald, G.F.3
Van Sinderen, D.4
-
409
-
-
0030911037
-
Cloning and sequencing of the hyaluronate lyase gene from Propionibacterium acnes
-
Steiner, B., S. Romero-Steiner, D. Cruce, and R. George. 1997. Cloning and sequencing of the hyaluronate lyase gene from Propionibacterium acnes. Can. J. Microbiol. 43:315-321.
-
(1997)
Can. J. Microbiol
, vol.43
, pp. 315-321
-
-
Steiner, B.1
Romero-Steiner, S.2
Cruce, D.3
George, R.4
-
410
-
-
0026689691
-
Sebaceous gland lipids
-
Stewart, M. E. 1992. Sebaceous gland lipids. Semin. Dermatol. 11:100-105.
-
(1992)
Semin. Dermatol
, vol.11
, pp. 100-105
-
-
Stewart, M.E.1
-
411
-
-
0037022605
-
Mycobacterium tuberculosis WhiB3 interacts with RpoV to affect host survival but is dispensable for in vivo growth
-
Steyn, A. J., D. M. Collins, M. K. Hondalus, W. R. Jacobs, Jr., R. P. Kawakami, and B. R. Bloom. 2002. Mycobacterium tuberculosis WhiB3 interacts with RpoV to affect host survival but is dispensable for in vivo growth. Proc. Natl. Acad. Sci. USA 99:3147-3152.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 3147-3152
-
-
Steyn, A.J.1
Collins, D.M.2
Hondalus, M.K.3
Jacobs Jr., W.R.4
Kawakami, R.P.5
Bloom, B.R.6
-
412
-
-
10744229306
-
Giant plasmid-encoded polyketide synthases produce the macrolide toxin of Mycobacterium ulcerans
-
Stinear, T. P., A. Mve-Obiang, P. L. Small, W. Frigui, M. J. Pryor, R. Brosch, G. A. Jenkin, P. D. Johnson, J. K. Davies, R. E. Lee, S. Adusumilli, T. Garnier, S. F. Haydock, P. F. Leadlay, and S. T. Cole. 2004. Giant plasmid-encoded polyketide synthases produce the macrolide toxin of Mycobacterium ulcerans. Proc. Natl. Acad. Sci. USA 101:1345-1349.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 1345-1349
-
-
Stinear, T.P.1
Mve-Obiang, A.2
Small, P.L.3
Frigui, W.4
Pryor, M.J.5
Brosch, R.6
Jenkin, G.A.7
Johnson, P.D.8
Davies, J.K.9
Lee, R.E.10
Adusumilli, S.11
Garnier, T.12
Haydock, S.F.13
Leadlay, P.F.14
Cole, S.T.15
-
413
-
-
0030691063
-
Identification of novel intergenic repetitive units in a mycobacterial two-component system operon
-
Supply, P., J. Magdalena, S. Himpens, and C. Locht. 1997. Identification of novel intergenic repetitive units in a mycobacterial two-component system operon. Mol. Microbiol. 26:991-1003.
-
(1997)
Mol. Microbiol
, vol.26
, pp. 991-1003
-
-
Supply, P.1
Magdalena, J.2
Himpens, S.3
Locht, C.4
-
414
-
-
0033497317
-
-
Suzuki, K. I., M. Suzuki, J. Sasaki, Y. H. Park, and K. K. Komagata. 1999. Leifsonia gen. nov., a genus for 2,4-diaminobutyric acid-containing actinomycetes to accommodate Corynebacterium aquaticum Leifson 1962 and Clavibacter xyli subsp. cynodontis Davis et al. 1984. J. Gen. Appl. Microbiol. 45:253-262.
-
Suzuki, K. I., M. Suzuki, J. Sasaki, Y. H. Park, and K. K. Komagata. 1999. Leifsonia gen. nov., a genus for 2,4-diaminobutyric acid-containing actinomycetes to accommodate "Corynebacterium aquaticum" Leifson 1962 and Clavibacter xyli subsp. cynodontis Davis et al. 1984. J. Gen. Appl. Microbiol. 45:253-262.
-
-
-
-
415
-
-
33646594074
-
High-throughput transposon mutagenesis of Corynebacterium glutamicum and construction of a single-gene disruptant mutant library
-
Suzuki, N., N. Okai, H. Nonaka, Y. Tsuge, M. Inui, and H. Yukawa. 2006. High-throughput transposon mutagenesis of Corynebacterium glutamicum and construction of a single-gene disruptant mutant library. Appl. Environ. Microbiol. 72:3750-3755.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 3750-3755
-
-
Suzuki, N.1
Okai, N.2
Nonaka, H.3
Tsuge, Y.4
Inui, M.5
Yukawa, H.6
-
416
-
-
20444426804
-
Large-scale engineering of the Corynebacterium glutamicum genome
-
Suzuki, N., S. Okayama, H. Nonaka, Y. Tsuge, M. Inui, and H. Yukawa. 2005. Large-scale engineering of the Corynebacterium glutamicum genome. Appl. Environ. Microbiol. 71:3369-3372.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 3369-3372
-
-
Suzuki, N.1
Okayama, S.2
Nonaka, H.3
Tsuge, Y.4
Inui, M.5
Yukawa, H.6
-
417
-
-
17844381074
-
Cre/loxP-mediated deletion system for large genome rearrangements in Corynebacterium glutamicum
-
Suzuki, N., Y. Tsuge, M. Inui, and H. Yukawa. 2005. Cre/loxP-mediated deletion system for large genome rearrangements in Corynebacterium glutamicum. Appl. Microbiol. Biotechnol. 67:225-233.
-
(2005)
Appl. Microbiol. Biotechnol
, vol.67
, pp. 225-233
-
-
Suzuki, N.1
Tsuge, Y.2
Inui, M.3
Yukawa, H.4
-
418
-
-
33749012278
-
Type III pilus of corynebacteria: Pilus length is determined by the level of its major pilin subunit
-
Swierczynski, A., and H. Ton-Thai. 2006. Type III pilus of corynebacteria: pilus length is determined by the level of its major pilin subunit. J. Bacteriol. 188:6318-6325.
-
(2006)
J. Bacteriol
, vol.188
, pp. 6318-6325
-
-
Swierczynski, A.1
Ton-Thai, H.2
-
419
-
-
0142125295
-
A rare leucine codon in adpA is implicated in the morphological defect of bldA mutants of Streptomyces coelicolor
-
Takano, E., M. Tao, F. Long, M. J. Bibb, L. Wang, W. Li, M. J. Buttner, M. J. Bibb, Z. X. Deng, and K. F. Chater. 2003. A rare leucine codon in adpA is implicated in the morphological defect of bldA mutants of Streptomyces coelicolor. Mol. Microbiol. 50:475-486.
-
(2003)
Mol. Microbiol
, vol.50
, pp. 475-486
-
-
Takano, E.1
Tao, M.2
Long, F.3
Bibb, M.J.4
Wang, L.5
Li, W.6
Buttner, M.J.7
Bibb, M.J.8
Deng, Z.X.9
Chater, K.F.10
-
420
-
-
0037189373
-
50 million years of genomic stasis in endosymbiotic bacteria
-
Tamas, I., L. Klasson, B. Canback, A. K. Naslund, A. S. Eriksson, J. J. Wernegreen, J. P. Sandstrom, N. A. Moran, and S. G. Andersson. 2002. 50 million years of genomic stasis in endosymbiotic bacteria. Science 296:2376-2379.
-
(2002)
Science
, vol.296
, pp. 2376-2379
-
-
Tamas, I.1
Klasson, L.2
Canback, B.3
Naslund, A.K.4
Eriksson, A.S.5
Wernegreen, J.J.6
Sandstrom, J.P.7
Moran, N.A.8
Andersson, S.G.9
-
421
-
-
0035827349
-
Mutualists and parasites: How to paint yourself into a (metabolic) corner
-
Tamas, I., L. M. Klasson, J. P. Sandstrom, and S. G. Andersson. 2001. Mutualists and parasites: how to paint yourself into a (metabolic) corner. FEBS Lett. 498:135-139.
-
(2001)
FEBS Lett
, vol.498
, pp. 135-139
-
-
Tamas, I.1
Klasson, L.M.2
Sandstrom, J.P.3
Andersson, S.G.4
-
422
-
-
15744362314
-
Structural and functional analysis of pTB6 from Bifidobacterium longum
-
Tanaka, K., K. Samura, and Y. Kano. 2005. Structural and functional analysis of pTB6 from Bifidobacterium longum. Biosci. Biotechnol. Biochem. 69:422-425.
-
(2005)
Biosci. Biotechnol. Biochem
, vol.69
, pp. 422-425
-
-
Tanaka, K.1
Samura, K.2
Kano, Y.3
-
423
-
-
0031453626
-
Brasilinolide A, a new macrolide antibiotic produced by Nocardia brasiliensis: Producing strain, isolation and biological activity
-
Tanaka, Y., H. Komaki, K. Yazawa, Y. Mikami, A. Nemoto, T. Tojyo, K. Kadowaki, H. Shigemori, and J. Kobayashi. 1997. Brasilinolide A, a new macrolide antibiotic produced by Nocardia brasiliensis: producing strain, isolation and biological activity. J. Antibiot. (Tokyo) 50:1036-1041.
-
(1997)
J. Antibiot. (Tokyo)
, vol.50
, pp. 1036-1041
-
-
Tanaka, Y.1
Komaki, H.2
Yazawa, K.3
Mikami, Y.4
Nemoto, A.5
Tojyo, T.6
Kadowaki, K.7
Shigemori, H.8
Kobayashi, J.9
-
425
-
-
0037288201
-
Insights into the genetic organization of the Corynebacterium diphtheriae erythromycin resistance plasmid pNG2 deduced from its complete nucleotide sequence
-
Tauch, A., N. Bischoff, I. Brune, and J. Kalinowski. 2003. Insights into the genetic organization of the Corynebacterium diphtheriae erythromycin resistance plasmid pNG2 deduced from its complete nucleotide sequence. Plasmid 49:63-74.
-
(2003)
Plasmid
, vol.49
, pp. 63-74
-
-
Tauch, A.1
Bischoff, N.2
Brune, I.3
Kalinowski, J.4
-
426
-
-
4344598919
-
Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium
-
Tauch, A., N. Bischoff, A. Puhler, and J. Kalinowski. 2004. Comparative genomics identified two conserved DNA modules in a corynebacterial plasmid family present in clinical isolates of the opportunistic human pathogen Corynebacterium jeikeium. Plasmid 52:102-118.
-
(2004)
Plasmid
, vol.52
, pp. 102-118
-
-
Tauch, A.1
Bischoff, N.2
Puhler, A.3
Kalinowski, J.4
-
427
-
-
0036417217
-
The 27.8-kb R-plasmid pTET3 from Corynebacterium glutamicum encodes the aminoglycoside adenyltransferase gene cassette aadA9 and the regulated tetracycline efflux system Tet 33 flanked by active copies of the widespread insertion sequence IS6100
-
Tauch, A., S. Gotker, A. Puhler, J. Kalinowski, and G. Thierbach. 2002. The 27.8-kb R-plasmid pTET3 from Corynebacterium glutamicum encodes the aminoglycoside adenyltransferase gene cassette aadA9 and the regulated tetracycline efflux system Tet 33 flanked by active copies of the widespread insertion sequence IS6100. Plasmid 48:117-129.
-
(2002)
Plasmid
, vol.48
, pp. 117-129
-
-
Tauch, A.1
Gotker, S.2
Puhler, A.3
Kalinowski, J.4
Thierbach, G.5
-
428
-
-
21144440616
-
Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora
-
Tauch, A., O. Kaiser, T. Hain, A. Goesmann, B. Weisshaar, A. Albersmeier, T. Bekel, N. Bischoff, I. Brune, T. Chakraborty, J. Kalinowski, F. Meyer, O. Rupp, S. Schneiker, P. Viehoever, and A. Puhler. 2005. Complete genome sequence and analysis of the multiresistant nosocomial pathogen Corynebacterium jeikeium K411, a lipid-requiring bacterium of the human skin flora. J. Bacteriol. 187:4671-4682.
-
(2005)
J. Bacteriol
, vol.187
, pp. 4671-4682
-
-
Tauch, A.1
Kaiser, O.2
Hain, T.3
Goesmann, A.4
Weisshaar, B.5
Albersmeier, A.6
Bekel, T.7
Bischoff, N.8
Brune, I.9
Chakraborty, T.10
Kalinowski, J.11
Meyer, F.12
Rupp, O.13
Schneiker, S.14
Viehoever, P.15
Puhler, A.16
-
429
-
-
0033833856
-
The 51,409-bp R-plasmid pTP10 from the multiresistant clinical isolate Corynebacterium striatum M82B is composed of DNA segments initially identified in soil bacteria and in plant, animal, and human pathogens
-
Tauch, A., S. Krieft, J. Kalinowski, and A. Puhler. 2000. The 51,409-bp R-plasmid pTP10 from the multiresistant clinical isolate Corynebacterium striatum M82B is composed of DNA segments initially identified in soil bacteria and in plant, animal, and human pathogens. Mol. Gen. Genet. 263:1-11.
-
(2000)
Mol. Gen. Genet
, vol.263
, pp. 1-11
-
-
Tauch, A.1
Krieft, S.2
Kalinowski, J.3
Puhler, A.4
-
430
-
-
0042932755
-
Plasmids in Corynebacterium glutamicum and their molecular classification by comparative genomics
-
Tauch, A., A. Puhler, J. Kalinowski, and G. Thierbach. 2003. Plasmids in Corynebacterium glutamicum and their molecular classification by comparative genomics. J. Biotechnol. 104:27-40.
-
(2003)
J. Biotechnol
, vol.104
, pp. 27-40
-
-
Tauch, A.1
Puhler, A.2
Kalinowski, J.3
Thierbach, G.4
-
431
-
-
0033635978
-
TetZ, a new tetracycline resistance determinant discovered in gram-positive bacteria, shows high homology to gram-negative regulated efflux systems
-
Tauch, A., A. Puhler, J. Kalinowski, and G. Thierbach. 2000. TetZ, a new tetracycline resistance determinant discovered in gram-positive bacteria, shows high homology to gram-negative regulated efflux systems. Plasmid 44:285-291.
-
(2000)
Plasmid
, vol.44
, pp. 285-291
-
-
Tauch, A.1
Puhler, A.2
Kalinowski, J.3
Thierbach, G.4
-
432
-
-
0027318131
-
Development of a native plasmid as a cloning vector in Clavibacter xyli subsp. cynodontis
-
Taylor, J., R. S. Stearman, and B. B. Uratani. 1993. Development of a native plasmid as a cloning vector in Clavibacter xyli subsp. cynodontis. Plasmid 29:241-244.
-
(1993)
Plasmid
, vol.29
, pp. 241-244
-
-
Taylor, J.1
Stearman, R.S.2
Uratani, B.B.3
-
433
-
-
0032708648
-
Analysis of the proteome of Mycobacterium tuberculosis in silico
-
Tekaia, F., S. V. Gordon, T. Garnier, R. Brosch, B. G. Barrell, and S. T. Cole. 1999. Analysis of the proteome of Mycobacterium tuberculosis in silico. Tuber. Lung Dis. 79:329-342.
-
(1999)
Tuber. Lung Dis
, vol.79
, pp. 329-342
-
-
Tekaia, F.1
Gordon, S.V.2
Garnier, T.3
Brosch, R.4
Barrell, B.G.5
Cole, S.T.6
-
434
-
-
0032778047
-
The genomic tree as revealed from whole proteome comparisons
-
Tekaia, F., A. Lazcano, and B. Dujon. 1999. The genomic tree as revealed from whole proteome comparisons. Genome Res. 9:550-557.
-
(1999)
Genome Res
, vol.9
, pp. 550-557
-
-
Tekaia, F.1
Lazcano, A.2
Dujon, B.3
-
435
-
-
0031693599
-
-
Titball, R. W. 1998. Bacterial phospholipases. Symp. Ser. Soc. Appl. Microbiol. 27:127S-137S.
-
Titball, R. W. 1998. Bacterial phospholipases. Symp. Ser. Soc. Appl. Microbiol. 27:127S-137S.
-
-
-
-
436
-
-
3142559796
-
Sortases and pilin elements involved in pilus assembly of Corynebacterium diphtheriae
-
Ton-That, H., L. A. Marraffini, and O. Schneewind. 2004. Sortases and pilin elements involved in pilus assembly of Corynebacterium diphtheriae. Mol. Microbiol. 53:251-261.
-
(2004)
Mol. Microbiol
, vol.53
, pp. 251-261
-
-
Ton-That, H.1
Marraffini, L.A.2
Schneewind, O.3
-
437
-
-
0345689425
-
Assembly of pili on the surface of Corynebacterium diphtheriae
-
Ton-That, H., and O. Schneewind. 2003. Assembly of pili on the surface of Corynebacterium diphtheriae. Mol. Microbiol. 50:1429-1438.
-
(2003)
Mol. Microbiol
, vol.50
, pp. 1429-1438
-
-
Ton-That, H.1
Schneewind, O.2
-
438
-
-
0030832245
-
Use of polymerase chain reaction to identify a leucyl tRNA in Streptomyces coelicolor
-
Trepanier, N. K., G. D. Nguyen, P. J. Leedell, and B. K. Leskiw. 1997. Use of polymerase chain reaction to identify a leucyl tRNA in Streptomyces coelicolor. Gene 193:59-63.
-
(1997)
Gene
, vol.193
, pp. 59-63
-
-
Trepanier, N.K.1
Nguyen, G.D.2
Leedell, P.J.3
Leskiw, B.K.4
-
439
-
-
11144356962
-
-
Tsolaki, A. G., A. E. Hirsh, K. DeRiemer, J. A. Enciso, M. Z. Wong, M. Hannan, Y. O. Goguet de la Salmoniere, K. Aman, M. Kato-Maeda, and P. M. Small. 2004. Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains. Proc. Natl. Acad. Sci. USA 101:4865-4870.
-
Tsolaki, A. G., A. E. Hirsh, K. DeRiemer, J. A. Enciso, M. Z. Wong, M. Hannan, Y. O. Goguet de la Salmoniere, K. Aman, M. Kato-Maeda, and P. M. Small. 2004. Functional and evolutionary genomics of Mycobacterium tuberculosis: insights from genomic deletions in 100 strains. Proc. Natl. Acad. Sci. USA 101:4865-4870.
-
-
-
-
440
-
-
72849181002
-
Screening method for microorganisms accumulating metabolites and its use in the isolation of Micrococcus glutamicus
-
Udaka, S. 1960. Screening method for microorganisms accumulating metabolites and its use in the isolation of Micrococcus glutamicus. J. Bacteriol. 79:754-755.
-
(1960)
J. Bacteriol
, vol.79
, pp. 754-755
-
-
Udaka, S.1
-
441
-
-
0032902755
-
Two distinct mechanisms cause heterogeneity of 16S rRNA
-
Ueda, K., T. Seki, T. Kudo, T. Yoshida, and M. Kataoka. 1999. Two distinct mechanisms cause heterogeneity of 16S rRNA. J. Bacteriol. 181:78-82.
-
(1999)
J. Bacteriol
, vol.181
, pp. 78-82
-
-
Ueda, K.1
Seki, T.2
Kudo, T.3
Yoshida, T.4
Kataoka, M.5
-
442
-
-
0032485465
-
An outbreak involving extensive transmission of a virulent strain of Mycobacterium tuberculosis
-
Valway, S. E., M. P. Sanchez, T. F. Shinnick, I. Orme, T. Agerton, D. Hoy, J. S. Jones, H. Westmoreland, and I. M. Onorato. 1998. An outbreak involving extensive transmission of a virulent strain of Mycobacterium tuberculosis. N. Engl. J. Med. 338:633-639.
-
(1998)
N. Engl. J. Med
, vol.338
, pp. 633-639
-
-
Valway, S.E.1
Sanchez, M.P.2
Shinnick, T.F.3
Orme, I.4
Agerton, T.5
Hoy, D.6
Jones, J.S.7
Westmoreland, H.8
Onorato, I.M.9
-
443
-
-
0036852286
-
The automatic detection of homologous regions (ADHoRe) and its application to microcolinearity between Arabidopsis and rice
-
Vandepoele, K., Y. Saeys, C. Simillion, J. Raes, and Y. Van De Peer. 2002. The automatic detection of homologous regions (ADHoRe) and its application to microcolinearity between Arabidopsis and rice. Genome Res. 12:1792-1801.
-
(2002)
Genome Res
, vol.12
, pp. 1792-1801
-
-
Vandepoele, K.1
Saeys, Y.2
Simillion, C.3
Raes, J.4
Van De Peer, Y.5
-
444
-
-
0033581435
-
Mycobacterium ulcerans infection
-
van der Werf, T. S., W. T. van der Graaf, J. W. Tappero, and K. Asiedu. 1999. Mycobacterium ulcerans infection. Lancet 354:1013-1018.
-
(1999)
Lancet
, vol.354
, pp. 1013-1018
-
-
van der Werf, T.S.1
van der Graaf, W.T.2
Tappero, J.W.3
Asiedu, K.4
-
445
-
-
11344289629
-
Complete genomic nucleotide sequence and analysis of the temperate bacteriophage VWB
-
Van Dessel, W., L. Van Mellaert, H. Liesegang, C. Raasch, S. De Keersmaeker, N. Geukens, E. Lammertyn, W. Streit, and J. Anne. 2005. Complete genomic nucleotide sequence and analysis of the temperate bacteriophage VWB. Virology 331:325-337.
-
(2005)
Virology
, vol.331
, pp. 325-337
-
-
Van Dessel, W.1
Van Mellaert, L.2
Liesegang, H.3
Raasch, C.4
De Keersmaeker, S.5
Geukens, N.6
Lammertyn, E.7
Streit, W.8
Anne, J.9
-
446
-
-
0027498478
-
Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: Recommendations for a standardized methodology
-
van Embden, J. D., M. D. Cave, J. T. Crawford, J. W. Dale, K. D. Eisenach, B. Gicquel, P. Hermans, C. Martin, R. McAdam, T. M. Shinnick, et al. 1993. Strain identification of Mycobacterium tuberculosis by DNA fingerprinting: recommendations for a standardized methodology. J. Clin. Microbiol. 31:406-409.
-
(1993)
J. Clin. Microbiol
, vol.31
, pp. 406-409
-
-
van Embden, J.D.1
Cave, M.D.2
Crawford, J.T.3
Dale, J.W.4
Eisenach, K.D.5
Gicquel, B.6
Hermans, P.7
Martin, C.8
McAdam, R.9
Shinnick, T.M.10
-
447
-
-
33751323180
-
Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions
-
van Pittius, N. C. G., S. L. Sampson, H. Lee, Y. Kim, P. D. van Helden, and R. M. Warren. 2006. Evolution and expansion of the Mycobacterium tuberculosis PE and PPE multigene families and their association with the duplication of the ESAT-6 (esx) gene cluster regions. BMC Evol. Biol. 6:95.
-
(2006)
BMC Evol. Biol
, vol.6
, pp. 95
-
-
van Pittius, N.C.G.1
Sampson, S.L.2
Lee, H.3
Kim, Y.4
van Helden, P.D.5
Warren, R.M.6
-
448
-
-
23944440616
-
Diversity, vitality and activities of intestinal lactic acid bacteria and bifidobacteria assessed by molecular approaches
-
Vaughan, E. E., H. G. Heilig, K. Ben-Amor, and W. M. de Vos. 2005. Diversity, vitality and activities of intestinal lactic acid bacteria and bifidobacteria assessed by molecular approaches. FEMS Microbiol. Rev. 29:477-490.
-
(2005)
FEMS Microbiol. Rev
, vol.29
, pp. 477-490
-
-
Vaughan, E.E.1
Heilig, H.G.2
Ben-Amor, K.3
de Vos, W.M.4
-
449
-
-
33845808750
-
Analysis of bifidobacterial evolution using a multilocus approach
-
Ventura, M., C. Canchaya, A. Del Casale, F. Dellaglio, E. Neviani, G. F. Fitzgerald, and D. van Sinderen. 2006. Analysis of bifidobacterial evolution using a multilocus approach. Int. J. Syst. Evol. Microbiol. 56:2783-2792.
-
(2006)
Int. J. Syst. Evol. Microbiol
, vol.56
, pp. 2783-2792
-
-
Ventura, M.1
Canchaya, C.2
Del Casale, A.3
Dellaglio, F.4
Neviani, E.5
Fitzgerald, G.F.6
van Sinderen, D.7
-
450
-
-
34247592087
-
Genomics as a means to understand bacterial phylogeny and ecological adaptation: The case of bifidobacteria
-
Ventura, M., C. Canchaya, G. F. Fitzgerald, R. S. Gupta, and D. van Sinderen. 2007. Genomics as a means to understand bacterial phylogeny and ecological adaptation: the case of bifidobacteria. Antonie Leeuwenhoek 91:351-372.
-
(2007)
Antonie Leeuwenhoek
, vol.91
, pp. 351-372
-
-
Ventura, M.1
Canchaya, C.2
Fitzgerald, G.F.3
Gupta, R.S.4
van Sinderen, D.5
-
451
-
-
0242657388
-
Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification
-
Ventura, M., C. Canchaya, V. Meylan, T. R. Klaenhammer, and R. Zink. 2003. Analysis, characterization, and loci of the tuf genes in Lactobacillus and Bifidobacterium species and their direct application for species identification. Appl. Environ. Microbiol. 69:6908-6922.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 6908-6922
-
-
Ventura, M.1
Canchaya, C.2
Meylan, V.3
Klaenhammer, T.R.4
Zink, R.5
-
452
-
-
2442689507
-
Bifidobacterium lactis DSM 10140: Identification of the atp (atpBEFHAGDC) operon and analysis of its genetic structure, characteristics, and phylogeny
-
Ventura, M., C. Canchaya, D. van Sinderen, G. F. Fitzgerald, and R. Zink. 2004. Bifidobacterium lactis DSM 10140: identification of the atp (atpBEFHAGDC) operon and analysis of its genetic structure, characteristics, and phylogeny. Appl. Environ. Microbiol. 70:3110-3121.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 3110-3121
-
-
Ventura, M.1
Canchaya, C.2
van Sinderen, D.3
Fitzgerald, G.F.4
Zink, R.5
-
453
-
-
33746933405
-
How high G+C Gram-positive bacteria and in particular bifidobacteria cope with heat stress: Protein players and regulators
-
Ventura, M., C. Canchaya, Z. Zhang, V. Bernini, G. F. Fitzgerald, and D. van Sinderen. 2006. How high G+C Gram-positive bacteria and in particular bifidobacteria cope with heat stress: protein players and regulators. FEMS Microbiol. Rev. 30:734-759.
-
(2006)
FEMS Microbiol. Rev
, vol.30
, pp. 734-759
-
-
Ventura, M.1
Canchaya, C.2
Zhang, Z.3
Bernini, V.4
Fitzgerald, G.F.5
van Sinderen, D.6
-
454
-
-
8144219531
-
Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: Genetic, transcriptional, and phylogenetic analyses
-
Ventura, M., C. Canchaya, R. Zink, G. F. Fitzgerald, and D. van Sinderen. 2004. Characterization of the groEL and groES loci in Bifidobacterium breve UCC 2003: genetic, transcriptional, and phylogenetic analyses. Appl. Environ Microbiol. 70:6197-6209.
-
(2004)
Appl. Environ Microbiol
, vol.70
, pp. 6197-6209
-
-
Ventura, M.1
Canchaya, C.2
Zink, R.3
Fitzgerald, G.F.4
van Sinderen, D.5
-
455
-
-
0034931508
-
Molecular microbial analysis of Bifidobacterium isolates from different environments by the species-specific amplified ribosomal DNA restriction analysis (ARDRA)
-
Ventura, M., M. Elli, R. Reniero, and R. Zink. 2001. Molecular microbial analysis of Bifidobacterium isolates from different environments by the species-specific amplified ribosomal DNA restriction analysis (ARDRA). FEMS Microbiol. Ecol. 36:113-121.
-
(2001)
FEMS Microbiol. Ecol
, vol.36
, pp. 113-121
-
-
Ventura, M.1
Elli, M.2
Reniero, R.3
Zink, R.4
-
456
-
-
29144446029
-
Prophage-like elements in bifidobacteria: Insights from genomics, transcription, integration, distribution, and phylogenetic analysis
-
Ventura, M., J. H. Lee, C. Canchaya, R. Zink, S. Leahy, J. A. Moreno-Munoz, M. O'Connell-Motherway, D. Higgins, G. F. Fitzgerald, D. J. O'Sullivan, and D. van Sinderen. 2005. Prophage-like elements in bifidobacteria: insights from genomics, transcription, integration, distribution, and phylogenetic analysis. Appl. Environ. Microbiol. 71:8692-8705.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 8692-8705
-
-
Ventura, M.1
Lee, J.H.2
Canchaya, C.3
Zink, R.4
Leahy, S.5
Moreno-Munoz, J.A.6
O'Connell-Motherway, M.7
Higgins, D.8
Fitzgerald, G.F.9
O'Sullivan, D.J.10
van Sinderen, D.11
-
457
-
-
0038154010
-
Identification and tracing of Bifidobacterium species by use of enterobacterial repetitive intergenic consensus sequences
-
Ventura, M., V. Meylan, and R. Zink. 2003. Identification and tracing of Bifidobacterium species by use of enterobacterial repetitive intergenic consensus sequences. Appl. Environ. Microbiol. 69:4296-4301.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 4296-4301
-
-
Ventura, M.1
Meylan, V.2
Zink, R.3
-
458
-
-
0035374576
-
Specific identification and targeted characterization of Bifidobacterium lactis from different environmental isolates by a combined multiplex-PCR approach
-
Ventura, M., R. Reniero, and R. Zink. 2001. Specific identification and targeted characterization of Bifidobacterium lactis from different environmental isolates by a combined multiplex-PCR approach. Appl. Environ. Microbiol. 67:2760-2765.
-
(2001)
Appl. Environ. Microbiol
, vol.67
, pp. 2760-2765
-
-
Ventura, M.1
Reniero, R.2
Zink, R.3
-
459
-
-
8744316858
-
Insights into the taxonomy, genetics and physiology of bifidobacteria
-
Ventura, M., D. van Sinderen, G. F. Fitzgerald, and R. Zink. 2004. Insights into the taxonomy, genetics and physiology of bifidobacteria. Antonie Leeuwenhoek 86:205-223.
-
(2004)
Antonie Leeuwenhoek
, vol.86
, pp. 205-223
-
-
Ventura, M.1
van Sinderen, D.2
Fitzgerald, G.F.3
Zink, R.4
-
460
-
-
28844464635
-
The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003
-
Ventura, M., Z. Zhang, M. Cronin, C. Canchaya, J. G. Kenny, G. F. Fitzgerald, and D. van Sinderen. 2005. The ClgR protein regulates transcription of the clpP operon in Bifidobacterium breve UCC 2003. J. Bacteriol. 187:8411-8426.
-
(2005)
J. Bacteriol
, vol.187
, pp. 8411-8426
-
-
Ventura, M.1
Zhang, Z.2
Cronin, M.3
Canchaya, C.4
Kenny, J.G.5
Fitzgerald, G.F.6
van Sinderen, D.7
-
461
-
-
2142745366
-
Comparative sequence analysis of the tuf and recA genes and restriction fragment length polymorphism of the internal transcribed spacer region sequences supply additional tools for discriminating Bifidobacterium lactis from Bifidobacterium animalis
-
Ventura, M., and R. Zink. 2003. Comparative sequence analysis of the tuf and recA genes and restriction fragment length polymorphism of the internal transcribed spacer region sequences supply additional tools for discriminating Bifidobacterium lactis from Bifidobacterium animalis. Appl. Environ. Microbiol. 69:7517-7522.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 7517-7522
-
-
Ventura, M.1
Zink, R.2
-
462
-
-
0036952608
-
Rapid identification, differentiation, and proposed new taxonomic classification of Bifidobacterium lactis
-
Ventura, M., and R. Zink. 2002. Rapid identification, differentiation, and proposed new taxonomic classification of Bifidobacterium lactis. Appl. Environ. Microbiol. 68:6429-6434.
-
(2002)
Appl. Environ. Microbiol
, vol.68
, pp. 6429-6434
-
-
Ventura, M.1
Zink, R.2
-
463
-
-
0028046208
-
Transposon mutagenesis of coryneform bacteria
-
Vertes, A. A., Y. Asai, M. Inui, M. Kobayashi, Y. Kurusu, and H. Yukawa. 1994. Transposon mutagenesis of coryneform bacteria. Mol. Gen. Genet. 245:397-405.
-
(1994)
Mol. Gen. Genet
, vol.245
, pp. 397-405
-
-
Vertes, A.A.1
Asai, Y.2
Inui, M.3
Kobayashi, M.4
Kurusu, Y.5
Yukawa, H.6
-
464
-
-
29144494634
-
Manipulating corynebacteria, from individual genes to chromosomes
-
Vertes, A. A., M. Inui, and H. Yukawa. 2005. Manipulating corynebacteria, from individual genes to chromosomes. Appl. Environ. Microbiol. 71:7633-7642.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 7633-7642
-
-
Vertes, A.A.1
Inui, M.2
Yukawa, H.3
-
465
-
-
0031973808
-
Genetic instability of the Streptomyces chromosome
-
Volff, J. N., and J. Altenbuchner. 1998. Genetic instability of the Streptomyces chromosome. Mol. Microbiol. 27:239-246.
-
(1998)
Mol. Microbiol
, vol.27
, pp. 239-246
-
-
Volff, J.N.1
Altenbuchner, J.2
-
466
-
-
0034823131
-
Concentration and distribution of sialic acid in human milk and infant formulas
-
Wang, B., J. Brand-Miller, P. McVeagh, and P. Petocz. 2001. Concentration and distribution of sialic acid in human milk and infant formulas. Am. J. Clin. Nutr. 74:510-515.
-
(2001)
Am. J. Clin. Nutr
, vol.74
, pp. 510-515
-
-
Wang, B.1
Brand-Miller, J.2
McVeagh, P.3
Petocz, P.4
-
467
-
-
0030722947
-
Evolutionary genetics of the isocitrate dehydrogenase gene (icd) in Escherichia coli and Salmonella enterica
-
Wang, F. S., T. S. Whittam, and R. K. Selander. 1997. Evolutionary genetics of the isocitrate dehydrogenase gene (icd) in Escherichia coli and Salmonella enterica. J. Bacteriol. 179:6551-6559.
-
(1997)
J. Bacteriol
, vol.179
, pp. 6551-6559
-
-
Wang, F.S.1
Whittam, T.S.2
Selander, R.K.3
-
468
-
-
33745142549
-
In vitro fermentation of breast milk oligosaccharides by Bifidobacterium infantis and Lactobacillus gasseri
-
Ward, R. E., M. Ninonuevo, D. A. Mills, C. B. Lebrilla, and J. B. German. 2006. In vitro fermentation of breast milk oligosaccharides by Bifidobacterium infantis and Lactobacillus gasseri. Appl. Environ. Microbiol. 72:4497-4499.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 4497-4499
-
-
Ward, R.E.1
Ninonuevo, M.2
Mills, D.A.3
Lebrilla, C.B.4
German, J.B.5
-
469
-
-
0000770675
-
Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
-
Wayne, L. G., D. J. Brenner, R. R Colwell, et al. 1987. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int. J. Syst. Bacteriol. 37:463-464.
-
(1987)
Int. J. Syst. Bacteriol
, vol.37
, pp. 463-464
-
-
Wayne, L.G.1
Brenner, D.J.2
Colwell, R.R.3
-
470
-
-
0032453525
-
Nitrate reduction as a marker for hypoxic shiftdown of Mycobacterium tuberculosis
-
Wayne, L. G., and L. G. Hayes. 1998. Nitrate reduction as a marker for hypoxic shiftdown of Mycobacterium tuberculosis. Tuber. Lung Dis. 79:127-132.
-
(1998)
Tuber. Lung Dis
, vol.79
, pp. 127-132
-
-
Wayne, L.G.1
Hayes, L.G.2
-
471
-
-
12144290764
-
Genome plasticity in Streptomyces: Identification of 1 Mb TIRs in the S. coelicolor A3(2) chromosome
-
Weaver, D., N. Karoonuthaisiri, H. H. Tsai, C. H. Huang, M. L. Ho, S. Gai, K. G. Patel, J. Huang, S. N. Cohen, D. A. Hopwood, C. W. Chen, and C. M. Kao. 2004. Genome plasticity in Streptomyces: identification of 1 Mb TIRs in the S. coelicolor A3(2) chromosome. Mol. Microbiol. 51:1535-1550.
-
(2004)
Mol. Microbiol
, vol.51
, pp. 1535-1550
-
-
Weaver, D.1
Karoonuthaisiri, N.2
Tsai, H.H.3
Huang, C.H.4
Ho, M.L.5
Gai, S.6
Patel, K.G.7
Huang, J.8
Cohen, S.N.9
Hopwood, D.A.10
Chen, C.W.11
Kao, C.M.12
-
472
-
-
0034012134
-
Anaerobic nitrate reductase (narGHJI) activity of Mycobacterium bovis BCG in vitro and its contribution to virulence in immunodeficient mice
-
Weber, I., C. Fritz, S. Ruttkowski, A. Kreft, and F. C. Bange. 2000. Anaerobic nitrate reductase (narGHJI) activity of Mycobacterium bovis BCG in vitro and its contribution to virulence in immunodeficient mice. Mol. Microbiol. 35:1017-1025.
-
(2000)
Mol. Microbiol
, vol.35
, pp. 1017-1025
-
-
Weber, I.1
Fritz, C.2
Ruttkowski, S.3
Kreft, A.4
Bange, F.C.5
-
473
-
-
0021847048
-
Susceptibility of Propionibacterium acnes to killing and degradation by human neutrophils and monocytes in vitro
-
Webster, G. F., J. J. Leyden, R. A. Musson, and S. D. Douglas. 1985. Susceptibility of Propionibacterium acnes to killing and degradation by human neutrophils and monocytes in vitro. Infect. Immun. 49:116-121.
-
(1985)
Infect. Immun
, vol.49
, pp. 116-121
-
-
Webster, G.F.1
Leyden, J.J.2
Musson, R.A.3
Douglas, S.D.4
-
474
-
-
1442303075
-
Propionibacterium acnes and the pathogenesis of progressive macular hypomelanosis
-
Westerhof, W., G. N. Relyveld, M. M. Kingswijk, P. de Man, and H. E. Menke. 2004. Propionibacterium acnes and the pathogenesis of progressive macular hypomelanosis. Arch. Dermatol. 140:210-214.
-
(2004)
Arch. Dermatol
, vol.140
, pp. 210-214
-
-
Westerhof, W.1
Relyveld, G.N.2
Kingswijk, M.M.3
de Man, P.4
Menke, H.E.5
-
475
-
-
5544267135
-
Purification and characterisation of lipoglycan macroamphiphiles from Propionibacterium acnes
-
Whale, G. A., I. C. Sutcliffe, A. R. Morrisson, E. L. Pretswell, and N. Emmison. 2004. Purification and characterisation of lipoglycan macroamphiphiles from Propionibacterium acnes. Antonie Leeuwenhoek 86:77-85.
-
(2004)
Antonie Leeuwenhoek
, vol.86
, pp. 77-85
-
-
Whale, G.A.1
Sutcliffe, I.C.2
Morrisson, A.R.3
Pretswell, E.L.4
Emmison, N.5
-
476
-
-
33845199230
-
The twin-arginine translocation pathway is a major route of protein export in Streptomyces coelicolor
-
Widdick, D. A., K. Dilks, G. Chandra, A. Bottrill, M. Naldrett, M. Pohlschroder, and T. Palmer. 2006. The twin-arginine translocation pathway is a major route of protein export in Streptomyces coelicolor. Proc. Natl. Acad. Sci. USA 103:17927-17932.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 17927-17932
-
-
Widdick, D.A.1
Dilks, K.2
Chandra, G.3
Bottrill, A.4
Naldrett, M.5
Pohlschroder, M.6
Palmer, T.7
-
477
-
-
33645064834
-
Morphogenetic surfactants and their role in the formation of aerial hyphae in Streptomyces coelicolor
-
Willey, J. M., A. Willems, S. Kodani, and J. R. Nodwell. 2006. Morphogenetic surfactants and their role in the formation of aerial hyphae in Streptomyces coelicolor. Mol. Microbiol. 59:731-742.
-
(2006)
Mol. Microbiol
, vol.59
, pp. 731-742
-
-
Willey, J.M.1
Willems, A.2
Kodani, S.3
Nodwell, J.R.4
-
478
-
-
33746087277
-
Facile recovery of individual high-molecular-weight, low-copy-number natural plasmids for genomic sequencing
-
Williams, L. E., C. Detter, K. Barry, A. Lapidus, and A. O. Summers. 2006. Facile recovery of individual high-molecular-weight, low-copy-number natural plasmids for genomic sequencing. Appl. Environ. Microbiol. 72:4899-4906.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 4899-4906
-
-
Williams, L.E.1
Detter, C.2
Barry, K.3
Lapidus, A.4
Summers, A.O.5
-
479
-
-
0023732855
-
Plasmids in coryneform bacteria of human origin
-
Williams, S. M., and W. C. Noble. 1988. Plasmids in coryneform bacteria of human origin. J. Appl. Bacteriol. 64:475-482.
-
(1988)
J. Appl. Bacteriol
, vol.64
, pp. 475-482
-
-
Williams, S.M.1
Noble, W.C.2
-
480
-
-
0025738042
-
Phylogeny of the Whipple's-disease-associated bacterium
-
Wilson, K. H., R. Blitchington, R. Frothingham, and J. A. Wilson. 1991. Phylogeny of the Whipple's-disease-associated bacterium. Lancet 338:474-475.
-
(1991)
Lancet
, vol.338
, pp. 474-475
-
-
Wilson, K.H.1
Blitchington, R.2
Frothingham, R.3
Wilson, J.A.4
-
481
-
-
0028903397
-
Control of lytic development in the Streptomyces temperate phage phi C31
-
Wilson, S. E., C. J. Ingham, I. S. Hunter, and M. C. Smith. 1995. Control of lytic development in the Streptomyces temperate phage phi C31. Mol. Microbiol. 16:131-143.
-
(1995)
Mol. Microbiol
, vol.16
, pp. 131-143
-
-
Wilson, S.E.1
Ingham, C.J.2
Hunter, I.S.3
Smith, M.C.4
-
482
-
-
0023184331
-
Bacterial evolution
-
Woese, C. R. 1987. Bacterial evolution. Microbiol. Rev. 51:221-271.
-
(1987)
Microbiol. Rev
, vol.51
, pp. 221-271
-
-
Woese, C.R.1
-
483
-
-
0034682457
-
Interpreting the universal phylogenetic tree
-
Woese, C. R. 2000. Interpreting the universal phylogenetic tree. Proc. Natl. Acad. Sci. USA 97:8392-8396.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 8392-8396
-
-
Woese, C.R.1
-
484
-
-
0348044549
-
Genome trees constructed using five different approaches suggest new major bacterial clades. BCM
-
Wolf, Y. I., I. B. Rogozin, N. V. Grishin, R. L. Tatusov, and E. V. Koonin. 2001. Genome trees constructed using five different approaches suggest new major bacterial clades. BCM Evol. Biol. 1:8.
-
(2001)
Evol. Biol
, vol.1
, pp. 8
-
-
Wolf, Y.I.1
Rogozin, I.B.2
Grishin, N.V.3
Tatusov, R.L.4
Koonin, E.V.5
-
485
-
-
0035085816
-
Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context
-
Wolf, Y. I., I. B. Rogozin, A. S. Kondrashov, and E. V. Koonin.
-
(2001)
Genome Res
, vol.11
, pp. 356-372
-
-
Wolf, Y.I.1
Rogozin, I.B.2
Kondrashov, A.S.3
Koonin, E.V.4
-
486
-
-
0014301014
-
Mycobacteria in soil and their relation to disease-associated strains
-
Wolinsky, E., and T. K. Rynearson. 1968. Mycobacteria in soil and their relation to disease-associated strains. Am. Rev. Respir. Dis. 97:1032-1037.
-
(1968)
Am. Rev. Respir. Dis
, vol.97
, pp. 1032-1037
-
-
Wolinsky, E.1
Rynearson, T.K.2
-
487
-
-
0034303616
-
Microbial genome analysis: Insights into virulence, host adaptation and evolution
-
Wren, B. W. 2000. Microbial genome analysis: insights into virulence, host adaptation and evolution. Nat. Rev. Genet. 1:30-39.
-
(2000)
Nat. Rev. Genet
, vol.1
, pp. 30-39
-
-
Wren, B.W.1
-
488
-
-
33646063776
-
Predicted highly expressed genes in Nocardia farcinica and the implication for its primary metabolism and nocardial virulence
-
Wu, G., L. Nie, and W. Zhang. 2006. Predicted highly expressed genes in Nocardia farcinica and the implication for its primary metabolism and nocardial virulence. Antonie Leeuwenhoek 89:135-146.
-
(2006)
Antonie Leeuwenhoek
, vol.89
, pp. 135-146
-
-
Wu, G.1
Nie, L.2
Zhang, W.3
-
489
-
-
0141621201
-
A new subfamily of the Nudix hydrolase superfamily active on 5-methyl-UTP (ribo-TTP) and UTP
-
Xu, W., J. Shen, C. A. Dunn, and M. J. Bessman. 2003. A new subfamily of the Nudix hydrolase superfamily active on 5-methyl-UTP (ribo-TTP) and UTP. J. Biol. Chem. 278:37492-37496.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 37492-37496
-
-
Xu, W.1
Shen, J.2
Dunn, C.A.3
Bessman, M.J.4
-
490
-
-
0037515798
-
Limited regions of homology between linear and circular plasmids encoding methylenomycin biosynthesis in two independently isolated streptomycetes
-
Yamasaki, M., Y. Ikuto, A. Ohira, K. Chater, and H. Kinashi. 2003. Limited regions of homology between linear and circular plasmids encoding methylenomycin biosynthesis in two independently isolated streptomycetes. Microbiology 149:1351-1356.
-
(2003)
Microbiology
, vol.149
, pp. 1351-1356
-
-
Yamasaki, M.1
Ikuto, Y.2
Ohira, A.3
Chater, K.4
Kinashi, H.5
-
491
-
-
0034879872
-
Cytological evidence for association of the ends of the linear chromosome in Streptomyces coelicolor
-
Yang, M. C., and R. Losick. 2001. Cytological evidence for association of the ends of the linear chromosome in Streptomyces coelicolor. J. Bacteriol. 183:5180-5186.
-
(2001)
J. Bacteriol
, vol.183
, pp. 5180-5186
-
-
Yang, M.C.1
Losick, R.2
-
493
-
-
0032925428
-
Purification, amino acid sequence and mode of action of bifidocin B produced by Bifidobacterium bifidum NCFB 1454
-
Yildirim, Z., D. K. Winters, and M. G. Johnson. 1999. Purification, amino acid sequence and mode of action of bifidocin B produced by Bifidobacterium bifidum NCFB 1454. J. Appl. Microbiol. 86:45-54.
-
(1999)
J. Appl. Microbiol
, vol.86
, pp. 45-54
-
-
Yildirim, Z.1
Winters, D.K.2
Johnson, M.G.3
-
494
-
-
0345328128
-
Gene sequences useful for predicting relatedness of whole genomes in bacteria
-
Zeigler, D. R. 2003. Gene sequences useful for predicting relatedness of whole genomes in bacteria. Int. J. Syst. Evol. Microbiol. 53:1893-1900.
-
(2003)
Int. J. Syst. Evol. Microbiol
, vol.53
, pp. 1893-1900
-
-
Zeigler, D.R.1
-
495
-
-
20444386496
-
Genomic islands in the Corynebacterium efficiens genome
-
Zhang, R., and C. T. Zhang. 2005. Genomic islands in the Corynebacterium efficiens genome. Appl. Environ. Microbiol. 71:3126-3130.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 3126-3130
-
-
Zhang, R.1
Zhang, C.T.2
-
496
-
-
1842507580
-
A systematic method to identify genomic islands and its applications in analyzing the genomes of Corynebacterium glutamicum and Vibrio vulnificus CMCP6 chromosome I
-
Zhang, R., and C. T. Zhang. 2004. A systematic method to identify genomic islands and its applications in analyzing the genomes of Corynebacterium glutamicum and Vibrio vulnificus CMCP6 chromosome I. Bioinformatics 20:612-622.
-
(2004)
Bioinformatics
, vol.20
, pp. 612-622
-
-
Zhang, R.1
Zhang, C.T.2
-
497
-
-
0028096547
-
Molecular analysis and characterization of a broad-host-range plasmid, pEP2
-
Zhang, Y., J. Praszkier, A. Hodgson, and A. J. Pittard. 1994. Molecular analysis and characterization of a broad-host-range plasmid, pEP2. J. Bacteriol. 176:5718-5728.
-
(1994)
J. Bacteriol
, vol.176
, pp. 5718-5728
-
-
Zhang, Y.1
Praszkier, J.2
Hodgson, A.3
Pittard, A.J.4
-
498
-
-
0028130261
-
The superoxide dismutase gene, a target for detection and identification of mycobacteria by PCR
-
Zolg, J. W., and S. Philippi-Schulz. 1994. The superoxide dismutase gene, a target for detection and identification of mycobacteria by PCR. J. Clin. Microbiol. 32:2801-2812.
-
(1994)
J. Clin. Microbiol
, vol.32
, pp. 2801-2812
-
-
Zolg, J.W.1
Philippi-Schulz, S.2
-
499
-
-
0042351119
-
A 12.7 kb fragment of the Mycobacterium tuberculosis genome is not present in Mycobacterium bovis
-
Zumarraga, M., F. Bigi, A. Alito, M. I. Romano, and A. Cataldi. 1999. A 12.7 kb fragment of the Mycobacterium tuberculosis genome is not present in Mycobacterium bovis. Microbiology 145:893-897.
-
(1999)
Microbiology
, vol.145
, pp. 893-897
-
-
Zumarraga, M.1
Bigi, F.2
Alito, A.3
Romano, M.I.4
Cataldi, A.5
|