-
2
-
-
58149504183
-
Comparative analysis of fatty acid desaturases in cyanobacterial genomes
-
Xiaoyuan C., Yang Q., Zhao F., Qin S., Yang Y., Shen J., Lin H., Comparative analysis of fatty acid desaturases in cyanobacterial genomes Comparative and Functional Genomics 2008 2008
-
(2008)
Comparative and Functional Genomics
, vol.2008
-
-
Xiaoyuan, C.1
Yang, Q.2
Zhao, F.3
Qin, S.4
Yang, Y.5
Shen, J.6
Lin, H.7
-
3
-
-
58149488365
-
Cyanobacteria: Ecology, niche adaptation and genomics
-
Scanlan D., Cyanobacteria: ecology, niche adaptation and genomics Microbiology Today 2001 28 128 130
-
(2001)
Microbiology Today
, vol.28
, pp. 128-130
-
-
Scanlan, D.1
-
4
-
-
0042878464
-
Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation
-
DOI 10.1038/nature01947
-
Rocap G., Larimer F. W., Lamerdin J., Malfatti S., Chain P., Ahlgren N. A., Arellano A., Coleman M., Hauser L., Hess W. R., Johnson Z. I., Land M., Lindell D., Post A. F., Regala W., Shah M., Shaw S. L., Steglich C., Sullivan M. B., Ting C. S., Tolonen A., Webb E. A., Zinser E. R., Chisholm S. W., Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation Nature 2003 424 6952 1042 1047 (Pubitemid 37064302)
-
(2003)
Nature
, vol.424
, Issue.6952
, pp. 1042-1047
-
-
Rocap, G.1
Larimer, F.W.2
Lamerdin, J.3
Malfatti, S.4
Chain, P.5
Ahlgren, N.A.6
Arellano, A.7
Coleman, M.8
Hauser, L.9
Hess, W.R.10
Johnson, Z.I.11
Land, M.12
Lindell, D.13
Post, A.F.14
Regala, W.15
Shah, M.16
Shaw, S.L.17
Steglich, C.18
Sullivan, M.B.19
Ting, C.S.20
Tolonen, A.21
Webb, E.A.22
Zinser, E.R.23
Chisholm, S.W.24
more..
-
5
-
-
0041386044
-
Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome
-
DOI 10.1073/pnas.1733211100
-
Dufresne A., Salanoubat M., Partensky F., Artiguenave F., Axmann I. M., Barbe V., Duprat S., Galperin M. Y., Koonin E. V., Le Gall F., Makarova K. S., Ostrowski M., Oztas S., Robert C., Rogozin I. B., Scanlan D. J., De Marsac N. T., Weissenbach J., Wincker P., Wolf Y. I., Hess W. R., Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome Proceedings of the National Academy of Sciences of the United States of America 2003 100 17 10020 10025 (Pubitemid 37087061)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.17
, pp. 10020-10025
-
-
Dufresne, A.1
Salanoubat, M.2
Partensky, F.3
Artiguenave, F.4
Axmann, I.M.5
Barbe, V.6
Duprat, S.7
Galperin, M.Y.8
Koonin, E.V.9
Le Gall, F.10
Makarova, K.S.11
Ostrowski, M.12
Oztas, S.13
Robert, C.14
Rogozin, I.B.15
Scanlan, D.J.16
De Marsac, N.T.17
Weissenbach, J.18
Wincker, P.19
Wolf, Y.I.20
Hess, W.R.21
more..
-
6
-
-
0035707917
-
An overview of the Genome of Nostoc punctiforme, a multicellular, symbiotic Cyanobacterium
-
DOI 10.1023/A:1013840025518
-
Meeks J. C., Elhai J., Thiel T., Potts M., Larimer F., Lamerdin J., Predki P., Atlas R., An overview of the Genome of Nostoc punctiforme, a multicellular, symbiotic Cyanobacterium Photosynthesis Research 2001 70 1 85 106 (Pubitemid 34128540)
-
(2001)
Photosynthesis Research
, vol.70
, Issue.1
, pp. 85-106
-
-
Meeks, J.C.1
Elhai, J.2
Thiel, T.3
Potts, M.4
Larimer, F.5
Lamerdin, J.6
Predki, P.7
Atlas, R.8
-
7
-
-
0033009854
-
Prochlorococcus, a marine photosynthetic prokaryote of global significance
-
Partensky F., Hess W. R., Vaulot D., Prochlorococcus, a marine photosynthetic prokaryote of global significance Microbiology and Molecular Biology Reviews 1999 63 1 106 127 (Pubitemid 29116088)
-
(1999)
Microbiology and Molecular Biology Reviews
, vol.63
, Issue.1
, pp. 106-127
-
-
Partensky, F.1
Hess, W.R.2
Vaulot, D.3
-
8
-
-
12444282639
-
Complete Genome Structure of Gloeobacter violaceus PCC 7421, a Cyanobacterium that Lacks Thylakoids (Supplement)
-
DOI 10.1093/dnares/10.4.181
-
Nakamura Y., Kaneko T., Sato S., Mimuro M., Miyashita H., Tsuchiya T., Sasamoto S., Watanabe A., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shimpo S., Takeuchi C., Yamada M., Tabata S., Complete genome structure of gloeobacter violaceus PCC 7421, a cyanobacterium that lacks thylakoids (Supplement) DNA Research 2003 10 4 181 201 (Pubitemid 37288303)
-
(2003)
DNA Research
, vol.10
, Issue.4
, pp. 181-201
-
-
Nakamura, Y.1
Kaneko, T.2
Sato, S.3
Mimuro, M.4
Miyashita, H.5
Tsuchiya, T.6
Sasamoto, S.7
Watanabe, A.8
Kawashima, K.9
Kishida, Y.10
Kiyokawa, C.11
Kohara, M.12
Matsumoto, M.13
Matsuno, A.14
Nakazaki, N.15
Shimpo, S.16
Takeuchi, C.17
Yamada, M.18
Tabata, S.19
-
9
-
-
0001041110
-
Genetic control of abscisic acid biosynthesis in maize
-
DOI 10.1073/pnas.94.22.12235
-
Tan B. C., Schwartz S. H., Zeevaart J. A. D., Mccarty D. R., Genetic control of abscisic acid biosynthesis in maize Proceedings of the National Academy of Sciences of the United States of America 1997 94 22 12235 12240 (Pubitemid 27467872)
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, Issue.22
, pp. 12235-12240
-
-
Tan, B.C.1
Schwartz, S.H.2
Zeevaart, J.A.D.3
Mccarty, D.R.4
-
10
-
-
1842338033
-
Specific oxidative cleavage of carotenoids by VP14 of maize
-
DOI 10.1126/science.276.5320.1872
-
Schwartz S. H., Tan B. C., Gage D. A., Zeevaart J. A. D., McCarty D. R., Specific oxidative cleavage of carotenoids by VP14 of maize Science 1997 276 5320 1872 1874 (Pubitemid 27443666)
-
(1997)
Science
, vol.276
, Issue.5320
, pp. 1872-1874
-
-
Schwartz, S.H.1
Tan, B.C.2
Gage, D.A.3
Zeevaart, J.A.D.4
McCarty, D.R.5
-
11
-
-
0034697178
-
Filling the gap in vitamin A research. Molecular identification of an enzyme cleaving β-carotene to retinal
-
DOI 10.1074/jbc.275.16.11915
-
Von Lintig J., Vogt K., Filling the gap in vitamin A research. Molecular identification of an enzyme cleaving -carotene to retinal Journal of Biological Chemistry 2000 275 16 11915 11920 (Pubitemid 30237761)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.16
, pp. 11915-11920
-
-
Von Lintig, J.1
Vogt, K.2
-
12
-
-
0035794153
-
Identification, expression, and substrate specificity of a mammalian -carotene 15,15′-dioxygenase
-
Redmond T. M., Gentleman S., Duncan T., Yu S., Wiggert B., Gantt E., Cunningham F. X., Identification, expression, and substrate specificity of a mammalian -carotene 15,15′-dioxygenase Journal of Biological Chemistry 2001 276 9 6560 6565
-
(2001)
Journal of Biological Chemistry
, vol.276
, Issue.9
, pp. 6560-6565
-
-
Redmond, T.M.1
Gentleman, S.2
Duncan, T.3
Yu, S.4
Wiggert, B.5
Gantt, E.6
Cunningham, F.X.7
-
13
-
-
34247874569
-
Retinal biosynthesis in fungi: Characterization of the carotenoid oxygenase CarX from Fusarium fujikuroi
-
DOI 10.1128/EC.00392-06
-
Prado-Cabrero A., Scherzinger D., Avalos J., Al-Babili S., Retinal biosynthesis in fungi: characterization of the carotenoid oxygenase CarX from Fusarium fujikuroi Eukaryotic Cell 2007 6 4 650 657 (Pubitemid 46697545)
-
(2007)
Eukaryotic Cell
, vol.6
, Issue.4
, pp. 650-657
-
-
Prado-Cabrero, A.1
Scherzinger, D.2
Avalos, J.3
Al-Babili, S.4
-
14
-
-
0037933420
-
Biosynthesis of the food and cosmetic plant pigment bixin (annatto)
-
DOI 10.1126/science.1085162
-
Bouvier F., Dogbo O., Camara B., Biosynthesis of the food and cosmetic plant pigment bixin (annatto) Science 2003 300 5628 2089 2091 (Pubitemid 36760134)
-
(2003)
Science
, vol.300
, Issue.5628
, pp. 2089-2091
-
-
Bouvier, F.1
Dogbo, O.2
Camara, B.3
-
15
-
-
0346664458
-
Oxidative remodeling of chromoplast carotenoids: Identification of the carotenoid dioxygenase CsCCD and CsZCD genes involved in Crocus secondary metabolite biogenesis
-
DOI 10.1105/tpc.006536
-
Bouvier F., Suire C., Mutterer J., Camara B., Oxidative remodeling of chromoplast carotenoids: identification of the carotenoid dioxygenase CsCCD and CsZCD genes involved in Crocus secondary metabolite biogenesis Plant Cell 2003 15 1 47 62 (Pubitemid 36137661)
-
(2003)
Plant Cell
, vol.15
, Issue.1
, pp. 47-62
-
-
Bouvier, F.1
Suire, C.2
Mutterer, J.3
Camara, B.4
-
16
-
-
34247384284
-
Identification and biochemical characterization of a novel carotenoid oxygenase: Elucidation of the cleavage step in the Fusarium carotenoid pathway
-
DOI 10.1111/j.1365-2958.2007.05665.x
-
Prado-Cabrero A., Estrada A. F., Al-Babili S., Avalos J., Identification and biochemical characterization of a novel carotenoid oxygenase: elucidation of the cleavage step in the Fusarium carotenoid pathway Molecular Microbiology 2007 64 2 448 460 (Pubitemid 46632625)
-
(2007)
Molecular Microbiology
, vol.64
, Issue.2
, pp. 448-460
-
-
Prado-Cabrero, A.1
Estrada, A.F.2
Al-Babili, S.3
Avalos, J.4
-
18
-
-
4344637047
-
Oxidative remodeling of plastid carotenoids
-
DOI 10.1016/j.abb.2004.06.028, PII S000398610400373X
-
Camara B., Bouvier F., Oxidative remodeling of plastid carotenoids Archives of Biochemistry and Biophysics 2004 430 1 16 21 (Pubitemid 39127451)
-
(2004)
Archives of Biochemistry and Biophysics
, vol.430
, Issue.1
, pp. 16-21
-
-
Camara, B.1
Bouvier, F.2
-
19
-
-
0016843919
-
Carotenoid composition in safran (author's transl)
-
Pfander H., Wittwer F., Carotenoid composition in safran (author's transl) Helvetica Chimica Acta 1975 58 7 2233 2236
-
(1975)
Helvetica Chimica Acta
, vol.58
, Issue.7
, pp. 2233-2236
-
-
Pfander, H.1
Wittwer, F.2
-
20
-
-
33750462411
-
Structural and biological aspects of carotenoid cleavage
-
DOI 10.1007/s00018-006-6176-6
-
Kloer D. P., Schulz G. E., Structural and biological aspects of carotenoid cleavage Cellular and Molecular Life Sciences 2006 63 19-20 2291 2303 (Pubitemid 44653040)
-
(2006)
Cellular and Molecular Life Sciences
, vol.63
, Issue.19-20
, pp. 2291-2303
-
-
Kloer, D.P.1
Schulz, G.E.2
-
21
-
-
62549090532
-
Role of carotenoid cleavage dioxygenase 1 (CCD1) in apocarotenoid biogenesis revisited
-
Floss D. S., Walter M. H., Role of carotenoid cleavage dioxygenase 1 (CCD1) in apocarotenoid biogenesis revisited Plant Signaling and Behavior 2009 4 3 172 175
-
(2009)
Plant Signaling and Behavior
, vol.4
, Issue.3
, pp. 172-175
-
-
Floss, D.S.1
Walter, M.H.2
-
22
-
-
77956875921
-
Genomic analysis and gene structure of the plant carotenoid dioxygenase 4 family: A deeper study in Crocus sativus and its allies
-
Ahrazem O., Trapero A., Gmez M. D., Rubio-Moraga A., Gmez-Gmez L., Genomic analysis and gene structure of the plant carotenoid dioxygenase 4 family: a deeper study in Crocus sativus and its allies Genomics 2010 96 4 239 250
-
(2010)
Genomics
, vol.96
, Issue.4
, pp. 239-250
-
-
Ahrazem, O.1
Trapero, A.2
Gmez, M.D.3
Rubio-Moraga, A.4
Gmez-Gmez, L.5
-
23
-
-
0038643756
-
Molecular characterization of the Arabidopsis 9-cis epoxycarotenoid dioxygenase gene family
-
DOI 10.1046/j.1365-313X.2003.01786.x
-
Tan B. C., Joseph L. M., Deng W. T., Liu L., Li Q. B., Cline K., McCarty D. R., Molecular characterization of the Arabidopsis 9-cis epoxycarotenoid dioxygenase gene family Plant Journal 2003 35 1 44 56 (Pubitemid 36821104)
-
(2003)
Plant Journal
, vol.35
, Issue.1
, pp. 44-56
-
-
Tan, B.-C.1
Joseph, L.M.2
Deng, W.-T.3
Liu, L.4
Li, Q.-B.5
Cline, K.6
McCarty, D.R.7
-
24
-
-
33751117993
-
Carotenoid cleavage dioxygenase (CmCCD4a) contributes to white color formation in Chrysanthemum petals
-
DOI 10.1104/pp.106.087130
-
Ohmiya A., Kishimoto S., Aida R., Yoshioka S., Sumitomo K., Carotenoid cleavage dioxygenase (CmCCD4a) contributes to white color formation in Chrysanthemum petals Plant Physiology 2006 142 3 1193 1201 (Pubitemid 44764642)
-
(2006)
Plant Physiology
, vol.142
, Issue.3
, pp. 1193-1201
-
-
Ohmiya, A.1
Kishimoto, S.2
Aida, R.3
Yoshioka, S.4
Sumitomo, K.5
-
25
-
-
0038676914
-
Carotenoid oxygenases: Cleave it or leave it
-
DOI 10.1016/S1360-1385(03)00053-0
-
Giuliano G., Al-Babili S., Von Lintig J., Carotenoid oxygenases: cleave it or leave it Trends in Plant Science 2003 8 4 145 149 (Pubitemid 36726453)
-
(2003)
Trends in Plant Science
, vol.8
, Issue.4
, pp. 145-149
-
-
Giuliano, G.1
Al-Babili, S.2
Von Lintig, J.3
-
26
-
-
58149293387
-
Carotenoid oxygenases involved in plant branching catalyse a highly specific conserved apocarotenoid cleavage reaction
-
Alder A., Holdermann I., Beyer P., Al-Babili S., Carotenoid oxygenases involved in plant branching catalyse a highly specific conserved apocarotenoid cleavage reaction Biochemical Journal 2008 416 2 289 296
-
(2008)
Biochemical Journal
, vol.416
, Issue.2
, pp. 289-296
-
-
Alder, A.1
Holdermann, I.2
Beyer, P.3
Al-Babili, S.4
-
27
-
-
14544289081
-
Retinal biosynthesis in Eubacteria: In vitro characterization of a novel carotenoid oxygenase from Synechocystis sp. PCC 6803
-
DOI 10.1111/j.1365-2958.2004.04460.x
-
Ruch S., Beyer P., Ernst H., Al-Babili S., Retinal biosynthesis in Eubacteria: in vitro characterization of a novel carotenoid oxygenase from Synechocystis sp. PCC 6803 Molecular Microbiology 2005 55 4 1015 1024 (Pubitemid 40299173)
-
(2005)
Molecular Microbiology
, vol.55
, Issue.4
, pp. 1015-1024
-
-
Ruch, S.1
Beyer, P.2
Ernst, H.3
Al-Babili, S.4
-
28
-
-
33846018938
-
Identification of carotenoid cleavage dioxygenases from Nostoc sp. PCC 7120 with different cleavage activities
-
DOI 10.1074/jbc.M606299200
-
Marasco E. K., Vay K., Schmidt-Dannert C., Identification of carotenoid cleavage dioxygenases from Nostoc sp. PCC 7120 with different cleavage activities Journal of Biological Chemistry 2006 281 42 31583 31593 (Pubitemid 46041424)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.42
, pp. 31583-31593
-
-
Marasco, E.K.1
Vay, K.2
Schmidt-Dannert, C.3
-
29
-
-
45149134225
-
In vitro characterization of a carotenoid cleavage dioxygenase from Nostoc sp. PCC 7120 reveals a novel cleavage pattern, cytosolic localization and induction by highlight
-
DOI 10.1111/j.1365-2958.2008.06282.x
-
Scherzinger D., Al-Babili S., In vitro characterization of a carotenoid cleavage dioxygenase from Nostoc sp. PCC 7120 reveals a novel cleavage pattern, cytosolic localization and induction by highlight Molecular Microbiology 2008 69 1 231 244 (Pubitemid 351832768)
-
(2008)
Molecular Microbiology
, vol.69
, Issue.1
, pp. 231-244
-
-
Scherzinger, D.1
Al-Babili, S.2
-
30
-
-
33748757737
-
Retinal is formed from apo-carotenoids in Nostoc sp. PCC7120: In vitro characterization of an apo-carotenoid oxygenase
-
DOI 10.1042/BJ20060592
-
Scherzinger D., Ruch S., Kloer D. P., Wilde A., Al-Babili S., Retinal is formed from apo-carotenoids in Nostoc sp. PCC7120: in vitro characterization of an apo-carotenoid oxygenase Biochemical Journal 2006 398 3 361 369 (Pubitemid 44453380)
-
(2006)
Biochemical Journal
, vol.398
, Issue.3
, pp. 361-369
-
-
Scherzinger, D.1
Ruch, S.2
Kloer, D.P.3
Wilde, A.4
Al-Babili, S.5
-
31
-
-
77952569115
-
Genome-wide comparative analysis of metacaspases in unicellular and filamentous cyanobacteria
-
Article 198
-
Jiang Q., Qin S., Wu Q. Y., Genome-wide comparative analysis of metacaspases in unicellular and filamentous cyanobacteria BMC Genomics 2010 11 1, article 198
-
(2010)
BMC Genomics
, vol.11
, Issue.1
-
-
Jiang, Q.1
Qin, S.2
Wu, Q.Y.3
-
32
-
-
37849047967
-
Genome-wide survey of putative Serine/Threonine protein kinases in cyanobacteria
-
Zhang X., Zhao F., Guan X., Yang Y., Liang C., Qin S., Genome-wide survey of putative Serine/Threonine protein kinases in cyanobacteria BMC Genomics 2007 8, article 395
-
(2007)
BMC Genomics
, vol.8395
-
-
Zhang, X.1
Zhao, F.2
Guan, X.3
Yang, Y.4
Liang, C.5
Qin, S.6
-
33
-
-
33645787020
-
Genome-wide analysis of restriction-modification system in unicellular and filamentous cyanobacteria
-
Zhao F., Zhang X., Liang C., Wu J., Bao Q., Qin S., Genome-wide analysis of restriction-modification system in unicellular and filamentous cyanobacteria Physiological Genomics 2006 24 3 181 190
-
(2006)
Physiological Genomics
, vol.24
, Issue.3
, pp. 181-190
-
-
Zhao, F.1
Zhang, X.2
Liang, C.3
Wu, J.4
Bao, Q.5
Qin, S.6
-
34
-
-
33748113946
-
Carotenoid biosynthesis in cyanobacteria: Structural and evolutionary scenarios based on comparative genomics
-
Liang C., Zhao F., Wei W., Wen Z., Qin S., Carotenoid biosynthesis in cyanobacteria: structural and evolutionary scenarios based on comparative genomics International Journal of Biological Sciences 2006 2 4 197 207 (Pubitemid 44304311)
-
(2006)
International Journal of Biological Sciences
, vol.2
, Issue.4
, pp. 197-207
-
-
Liang, C.1
Zhao, F.2
Wei, W.3
Wen, Z.4
Qin, S.5
-
35
-
-
55249093237
-
Using the basic local alignment search tool (BLAST)
-
Mount D. W., Using the basic local alignment search tool (BLAST) CSH Protocols 2007 2007
-
(2007)
CSH Protocols
, vol.2007
-
-
Mount, D.W.1
-
36
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S. F., Gish W., Miller W., Myers E. W., Lipman D. J., Basic local alignment search tool Journal of Molecular Biology 1990 215 3 403 410
-
(1990)
Journal of Molecular Biology
, vol.215
, Issue.3
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
37
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul S. F., Madden T. L., Schffer A. A., Zhang J., Zhang Z., Miller W., Lipman D. J., Gapped BLAST and PSI-BLAST: q new generation of protein database search programs Nucleic Acids Research 1997 25 17 3389 3402 (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
38
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J. D., Higgins D. G., Gibson T. J., CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Research 1994 22 22 4673 4680 (Pubitemid 24354800)
-
(1994)
Nucleic Acids Research
, vol.22
, Issue.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
39
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
DOI 10.1093/molbev/msm092
-
Tamura K., Dudley J., Nei M., Kumar S., MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0 Molecular Biology and Evolution 2007 24 8 1596 1599 (Pubitemid 47236692)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.8
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
40
-
-
0242578620
-
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
-
DOI 10.1080/10635150390235520
-
Guindon S., Gascuel O., A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood Systematic Biology 2003 52 5 696 704 (Pubitemid 37365050)
-
(2003)
Systematic Biology
, vol.52
, Issue.5
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
41
-
-
45849154166
-
An improved general amino acid replacement matrix
-
DOI 10.1093/molbev/msn067
-
Le S. Q., Gascuel O., An improved general amino acid replacement matrix Molecular Biology and Evolution 2008 25 7 1307 1320 (Pubitemid 351882003)
-
(2008)
Molecular Biology and Evolution
, vol.25
, Issue.7
, pp. 1307-1320
-
-
Le, S.Q.1
Gascuel, O.2
-
42
-
-
33750314083
-
TreeDyn: Towards dynamic graphics and annotations for analyses of trees
-
Chevenet F., Brun C., Bauls A. L., Jacq B., Christen R., TreeDyn: towards dynamic graphics and annotations for analyses of trees BMC Bioinformatics 2006 7, article 439
-
(2006)
BMC Bioinformatics
, vol.7439
-
-
Chevenet, F.1
Brun, C.2
Bauls, A.L.3
Jacq, B.4
Christen, R.5
-
44
-
-
80255127561
-
Genome-wide analysis of fatty acid desaturases in Soybean (Glycine max)
-
Chi X., Yang Q., Lu Y., Wang J., Zhang Q., Pan L., Chen M., He Y., Yu S., Genome-wide analysis of fatty acid desaturases in Soybean (Glycine max) Plant Molecular Biology Reporter 2011 29 4 769 783
-
(2011)
Plant Molecular Biology Reporter
, vol.29
, Issue.4
, pp. 769-783
-
-
Chi, X.1
Yang, Q.2
Lu, Y.3
Wang, J.4
Zhang, Q.5
Pan, L.6
Chen, M.7
He, Y.8
Yu, S.9
-
48
-
-
32144432437
-
The SWISS-MODEL workspace: A web-based environment for protein structure homology modelling
-
DOI 10.1093/bioinformatics/bti770
-
Arnold K., Bordoli L., Kopp J., Schwede T., The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling Bioinformatics 2006 22 2 195 201 (Pubitemid 43205406)
-
(2006)
Bioinformatics
, vol.22
, Issue.2
, pp. 195-201
-
-
Arnold, K.1
Bordoli, L.2
Kopp, J.3
Schwede, T.4
-
49
-
-
0042622380
-
SWISS-MODEL: An automated protein homology-modeling server
-
DOI 10.1093/nar/gkg520
-
Schwede T., Kopp J., Guex N., Peitsch M. C., SWISS-MODEL: an automated protein homology-modeling server Nucleic Acids Research 2003 31 13 3381 3385 (Pubitemid 37442164)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.13
, pp. 3381-3385
-
-
Schwede, T.1
Kopp, J.2
Guex, N.3
Peitsch, M.C.4
-
50
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling
-
DOI 10.1002/elps.1150181505
-
Guex N., Peitsch M. C., SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling Electrophoresis 1997 18 15 2714 2723 (Pubitemid 28059943)
-
(1997)
Electrophoresis
, vol.18
, Issue.15
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
51
-
-
79551613290
-
Toward the estimation of the absolute quality of individual protein structure models
-
Benkert P., Biasini M., Schwede T., Toward the estimation of the absolute quality of individual protein structure models Bioinformatics 2011 27 3 343 350
-
(2011)
Bioinformatics
, vol.27
, Issue.3
, pp. 343-350
-
-
Benkert, P.1
Biasini, M.2
Schwede, T.3
-
52
-
-
28044436397
-
Accelerated evolution associated with genome reduction in a free-living prokaryote
-
Dufresne A., Garczarek L., Partensky F., Accelerated evolution associated with genome reduction in a free-living prokaryote Genome Biology 2005 6 2 R14
-
(2005)
Genome Biology
, vol.6
, Issue.2
, pp. 14
-
-
Dufresne, A.1
Garczarek, L.2
Partensky, F.3
-
53
-
-
0005931570
-
The occurrence of lunularic and abscisic acids in plants
-
Pryce R. J., The occurrence of lunularic and abscisic acids in plants Phytochemistry 1972 11 5 1759 1761
-
(1972)
Phytochemistry
, vol.11
, Issue.5
, pp. 1759-1761
-
-
Pryce, R.J.1
-
54
-
-
34147161912
-
Effects of NaCl and KNO 3 concentrations on the abscisic acid content of Dunaliella sp. (Chlorophyta)
-
Tominaga N., Takahata M., Tominaga H., Effects of NaCl and KNO 3 concentrations on the abscisic acid content of Dunaliella sp. (Chlorophyta) Hydrobiologia 1993 267 13 163 168
-
(1993)
Hydrobiologia
, vol.267
, Issue.13
, pp. 163-168
-
-
Tominaga, N.1
Takahata, M.2
Tominaga, H.3
-
55
-
-
0030753468
-
Abscisic acid-dependent algal morphogenesis in the unicellular green alga Haematococcus pluvialis
-
DOI 10.1023/A:1005862809711
-
Kobayashi M., Hirai N., Kurimura Y., Ohigashi H., Tsuji Y., Abscisic acid-dependent algal morphogenesis in the unicellular green alga Haematococcus pluvialis Plant Growth Regulation 1997 22 2 79 85 (Pubitemid 27378234)
-
(1997)
Plant Growth Regulation
, vol.22
, Issue.2
, pp. 79-85
-
-
Kobayashi, M.1
Hirai, N.2
Kurimura, Y.3
Ohigashi, H.4
Tsuji, Y.5
-
56
-
-
0036619427
-
Inducible effects of abscisic acid on sporophyte discs from Laminaria japonica Areschoug (Laminariales, Phaeophyceae)
-
Nimura K., Mizuta H., Inducible effects of abscisic acid on sporophyte discs from Laminaria japonica Areschoug (Laminariales, Phaeophyceae) Journal of Applied Phycology 2002 14 3 159 163
-
(2002)
Journal of Applied Phycology
, vol.14
, Issue.3
, pp. 159-163
-
-
Nimura, K.1
Mizuta, H.2
-
57
-
-
34848820938
-
Novel phytohormones involved in long-range signaling
-
DOI 10.1016/j.pbi.2007.08.005, PII S1369526607001148, Cell Signalling and Gene Regulation Edited by Jian-Kang Zhu and Ko Shimamoto
-
Mouchel C. F., Leyser O., Novel phytohormones involved in long-range signaling Current Opinion in Plant Biology 2007 10 5 473 476 (Pubitemid 47503883)
-
(2007)
Current Opinion in Plant Biology
, vol.10
, Issue.5
, pp. 473-476
-
-
Mouchel, C.F.1
Leyser, O.2
-
58
-
-
3342920134
-
MAX3/CCD7 is a carotenoid cleavage dioxygenase required for the synthesis of a novel plant signaling molecule
-
DOI 10.1016/j.cub.2004.06.061, PII S0960982204004725
-
Booker J., Auldridge M., Wills S., McCarty D., Klee H., Leyser O., MAX3/CCD7 is a carotenoid cleavage dioxygenase required for the synthesis of a novel plant signaling molecule Current Biology 2004 14 14 1232 1238 (Pubitemid 38991809)
-
(2004)
Current Biology
, vol.14
, Issue.14
, pp. 1232-1238
-
-
Booker, J.1
Auldridge, M.2
Wills, S.3
McCarty, D.4
Klee, H.5
Leyser, O.6
-
59
-
-
8744286799
-
The biochemical characterization of two carotenoid cleavage enzymes from Arabidopsis indicates that a carotenoid-derived compound inhibits lateral branching
-
DOI 10.1074/jbc.M409004200
-
Schwartz S. H., Qin X., Loewen M. C., The biochemical characterization of two carotenoid cleavage enzymes from Arabidopsis indicates that a carotenoid-derived compound inhibits lateral branching Journal of Biological Chemistry 2004 279 45 46940 46945 (Pubitemid 39518347)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.45
, pp. 46940-46945
-
-
Schwartz, S.H.1
Qin, X.2
Loewen, M.C.3
-
60
-
-
33644762842
-
Characterization of three members of the Arabidopsis carotenoid cleavage dioxygenase family demonstrates the divergent roles of this multifunctional enzyme family
-
DOI 10.1111/j.1365-313X.2006.02666.x
-
Auldridge M. E., Block A., Vogel J. T., Dabney-Smith C., Mila I., Bouzayen M., Magallanes-Lundback M., DellaPenna D., McCarty D. R., Klee H. J., Characterization of three members of the Arabidopsis carotenoid cleavage dioxygenase family demonstrates the divergent roles of this multifunctional enzyme family Plant Journal 2006 45 6 982 993 (Pubitemid 43344759)
-
(2006)
Plant Journal
, vol.45
, Issue.6
, pp. 982-993
-
-
Auldridge, M.E.1
Block, A.2
Vogel, J.T.3
Dabney-Smith, C.4
Mila, I.5
Bouzayen, M.6
Magallanes-Lundback, M.7
DellaPenna, D.8
McCarty, D.R.9
Klee, H.J.10
-
61
-
-
0029379615
-
Levels of a terpenoid glycoside (Blumenin) and cell wall-bound phenolics in some cereal mycorrhizas
-
Maier W., Peipp H., Schmidt J., Wray V., Strack D., Levels of a terpenoid glycoside (Blumenin) and cell wall-bound phenolics in some cereal mycorrhizas Plant Physiology 1995 109 2 465 470
-
(1995)
Plant Physiology
, vol.109
, Issue.2
, pp. 465-470
-
-
Maier, W.1
Peipp, H.2
Schmidt, J.3
Wray, V.4
Strack, D.5
-
62
-
-
0029135985
-
Identification of a yellow pigment formed in maize roots upon mycorrhizal colonization
-
Klingner A., Bothe H., Wray V., Marner F. J., Identification of a yellow pigment formed in maize roots upon mycorrhizal colonization Phytochemistry 1995 38 1 53 55
-
(1995)
Phytochemistry
, vol.38
, Issue.1
, pp. 53-55
-
-
Klingner, A.1
Bothe, H.2
Wray, V.3
Marner, F.J.4
-
63
-
-
0033996644
-
Arbuscular mycorrhizal fungi induce the non-mevalonate methylerythritol phosphate pathway of isoprenoid biosynthesis correlated with accumulation of the 'yellow pigment' and other apocarotenoids
-
DOI 10.1046/j.1365-313X.2000.00708.x
-
Walter M. H., Fester T., Strack D., Arbuscular mycorrhizal fungi induce the non-mevalonate methylerythritol phosphate pathway of isoprenoid biosynthesis correlated with accumulation of the yellow pigment and other apocarotenoids Plant Journal 2000 21 6 571 578 (Pubitemid 30221305)
-
(2000)
Plant Journal
, vol.21
, Issue.6
, pp. 571-578
-
-
Walter, M.H.1
Fester, T.2
Strack, D.3
-
64
-
-
24944483638
-
13-norisoprenoid accumulation
-
DOI 10.1093/jxb/eri265
-
Mathieu S., Terrier N., Procureur J., Bigey F., Gnata Z., A Carotenoid Cleavage Dioxygenase from Vitis vinifera L.: functional characterization and expression during grape berry development in relation to C 13 -norisoprenoid accumulation Journal of Experimental Botany 2005 56 420 2721 2731 (Pubitemid 41330538)
-
(2005)
Journal of Experimental Botany
, vol.56
, Issue.420
, pp. 2721-2731
-
-
Mathieu, S.1
Terrier, N.2
Procureur, J.3
Bigey, F.4
Gunata, Z.5
-
65
-
-
0035816626
-
Characterization of a novel carotenoid cleavage dioxygenase from plants
-
Schwartz S. H., Qin X., Zeevaart J. A. D., Characterization of a novel carotenoid cleavage dioxygenase from plants Journal of Biological Chemistry 2001 276 27 25208 25211
-
(2001)
Journal of Biological Chemistry
, vol.276
, Issue.27
, pp. 25208-25211
-
-
Schwartz, S.H.1
Qin, X.2
Zeevaart, J.A.D.3
-
66
-
-
54049092870
-
Cytosolic and plastoglobule-targeted carotenoid dioxygenases from Crocus sativus are both involved in -ionone release
-
Rubio A., Rambla J. L., Santaella M., Gmez M. D., Orzaez D., Granell A., Gmez-Gmez L., Cytosolic and plastoglobule-targeted carotenoid dioxygenases from Crocus sativus are both involved in -ionone release Journal of Biological Chemistry 2008 283 36 24816 24825
-
(2008)
Journal of Biological Chemistry
, vol.283
, Issue.36
, pp. 24816-24825
-
-
Rubio, A.1
Rambla, J.L.2
Santaella, M.3
Gmez, M.D.4
Orzaez, D.5
Granell, A.6
Gmez-Gmez, L.7
-
67
-
-
45149133700
-
The carotenoid cleavage dioxygenase 1 enzyme has broad substrate specificity, cleaving multiple carotenoids at two different bond positions
-
Vogel J. T., Tan B. C., McCarty D. R., Klee H. J., The carotenoid cleavage dioxygenase 1 enzyme has broad substrate specificity, cleaving multiple carotenoids at two different bond positions Journal of Biological Chemistry 2008 283 17 11364 11373
-
(2008)
Journal of Biological Chemistry
, vol.283
, Issue.17
, pp. 11364-11373
-
-
Vogel, J.T.1
Tan, B.C.2
McCarty, D.R.3
Klee, H.J.4
-
68
-
-
0035957943
-
Identification and characterization of a mammalian enzyme catalyzing the asymmetric oxidative cleavage of orovitamin A
-
Kiefer C., Hessel S., Lampert J. M., Vogt K., Lederer M. O., Breithaupt D. E., Von Lintig J., Identification and characterization of a mammalian enzyme catalyzing the asymmetric oxidative cleavage of orovitamin A Journal of Biological Chemistry 2001 276 17 14110 14116
-
(2001)
Journal of Biological Chemistry
, vol.276
, Issue.17
, pp. 14110-14116
-
-
Kiefer, C.1
Hessel, S.2
Lampert, J.M.3
Vogt, K.4
Lederer, M.O.5
Breithaupt, D.E.6
Von Lintig, J.7
-
69
-
-
16444383613
-
The structure of a retinal-forming carotenoid oxygenase
-
DOI 10.1126/science.1108965
-
Kloer D. P., Ruch S., Al-Babili S., Beyer P., Schulz G. E., The structure of a retinal-forming carotenoid oxygenase Science 2005 308 5719 267 269 (Pubitemid 40558865)
-
(2005)
Science
, vol.308
, Issue.5719
, pp. 267-269
-
-
Kloer, D.P.1
Ruch, S.2
Al-Babili, S.3
Beyer, P.4
Schulz, G.E.5
-
70
-
-
79953065470
-
Carotenoids and their cleavage products: Biosynthesis and functions
-
Walter M. H., Strack D., Carotenoids and their cleavage products: biosynthesis and functions Natural Product Reports 2011 28 4 663 692
-
(2011)
Natural Product Reports
, vol.28
, Issue.4
, pp. 663-692
-
-
Walter, M.H.1
Strack, D.2
-
71
-
-
25844464185
-
Identification of conserved histidines and glutamic acid as key residues for isomerohydrolase activity of RPE65, an enzyme of the visual cycle in the retinal pigment epithelium
-
DOI 10.1016/j.febslet.2005.09.002, PII S001457930501077X
-
Takahashi Y., Moiseyev G., Chen Y., Ma J. X., Identification of conserved histidines and glutamic acid as key residues for isomerohydrolase activity of RPE65, an enzyme of the visual cycle in the retinal pigment epithelium FEBS Letters 2005 579 24 5414 5418 (Pubitemid 41395164)
-
(2005)
FEBS Letters
, vol.579
, Issue.24
, pp. 5414-5418
-
-
Takahashi, Y.1
Moiseyev, G.2
Chen, Y.3
Ma, J.-X.4
-
72
-
-
2942567044
-
Thermal activation and photoactivation of visual pigments
-
DOI 10.1529/biophysj.103.035626
-
Ala-Laurila P., Donner K., Koskelainen A., Thermal activation and photoactivation of visual pigments Biophysical Journal 2004 86 6 3653 3662 (Pubitemid 38780244)
-
(2004)
Biophysical Journal
, vol.86
, Issue.6
, pp. 3653-3662
-
-
Ala-Laurila, P.1
Donner, K.2
Koskelainen, A.3
-
73
-
-
33646353950
-
RPE65 is an iron(II)-dependent isomerohydrolase in the retinoid visual cycle
-
DOI 10.1074/jbc.M508903200
-
Moiseyev G., Takahashi Y., Chen Y., Gentleman S., Redmond T. M., Crouch R. K., Ma J. X., RPE65 is an iron(II)-dependent isomerohydrolase in the retinoid visual cycle Journal of Biological Chemistry 2006 281 5 2835 2840 (Pubitemid 43845748)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.5
, pp. 2835-2840
-
-
Moiseyev, G.1
Takahashi, Y.2
Chen, Y.3
Gentleman, S.4
Redmond, T.M.5
Crouch, R.K.6
Ma, J.-X.7
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