-
1
-
-
34247629588
-
Genetic reconstruction of a functional transcriptional regulatory network
-
DOI 10.1038/ng2012, PII NG2012
-
Z. Hu, P.J. Killion, and V.R. Iyer Genetic reconstruction of a functional transcriptional regulatory network Nature Genetics 39 2007 683 687 (Pubitemid 46680240)
-
(2007)
Nature Genetics
, vol.39
, Issue.5
, pp. 683-687
-
-
Hu, Z.1
Killion, P.J.2
Iyer, V.R.3
-
2
-
-
75549087626
-
Saccharomyces genome database provides mutant phenotype data
-
S.R. Engel, R. Balakrishnan, G. Binkley, K.R. Christie, M.C. Costanzo, S.S. Dwight, D.G. Fisk, J.E. Hirschman, B.C. Hitz, E.L. Hong, C.J. Krieger, M.S. Livstone, S.R. Miyasato, R. Nash, R. Oughtred, J. Park, M.S. Skrzypek, S. Weng, E.D. Wong, K. Dolinski, D. Botstein, and J.M. Cherry Saccharomyces genome database provides mutant phenotype data Nucleic Acids Research 38 2010 D433 D436
-
(2010)
Nucleic Acids Research
, vol.38
-
-
Engel, S.R.1
Balakrishnan, R.2
Binkley, G.3
Christie, K.R.4
Costanzo, M.C.5
Dwight, S.S.6
Fisk, D.G.7
Hirschman, J.E.8
Hitz, B.C.9
Hong, E.L.10
Krieger, C.J.11
Livstone, M.S.12
Miyasato, S.R.13
Nash, R.14
Oughtred, R.15
Park, J.16
Skrzypek, M.S.17
Weng, S.18
Wong, E.D.19
Dolinski, K.20
Botstein, D.21
Cherry, J.M.22
more..
-
3
-
-
27744511769
-
Cell biology: Regulation of yeast replicative life span by TOR and Sch9 response to nutrients
-
DOI 10.1126/science.1115535
-
M. Kaeberlein, R.W. Powers 3rd, K.K. Steffen, E.A. Westman, D. Hu, N. Dang, E.O. Kerr, K.T. Kirkland, S. Fields, and B.K. Kennedy Regulation of yeast replicative life span by TOR and Sch9 in response to nutrients Science 310 2005 1193 1196 (Pubitemid 41681747)
-
(2005)
Science
, vol.310
, Issue.5751
, pp. 1193-1196
-
-
Kaeberlein, M.1
Powers III, R.W.2
Steffen, K.K.3
Westman, E.A.4
Hu, D.5
Dang, N.6
Kerr, E.O.7
Kirkland, K.T.8
Fields, S.9
Kennedy, B.K.10
-
4
-
-
57049158206
-
Shortest-path network analysis is a useful approach toward identifying genetic determinants of longevity
-
J.R. Managbanag, T.M. Witten, D. Bonchev, L.A. Fox, M. Tsuchiya, B.K. Kennedy, and M. Kaeberlein Shortest-path network analysis is a useful approach toward identifying genetic determinants of longevity PLoS One 3 2008 e3802
-
(2008)
PLoS One
, vol.3
, pp. 3802
-
-
Managbanag, J.R.1
Witten, T.M.2
Bonchev, D.3
Fox, L.A.4
Tsuchiya, M.5
Kennedy, B.K.6
Kaeberlein, M.7
-
5
-
-
41649094265
-
Quantitative evidence for conserved longevity pathways between divergent eukaryotic species
-
DOI 10.1101/gr.074724.107
-
E.D. Smith, M. Tsuchiya, L.A. Fox, N. Dang, D. Hu, E.O. Kerr, E.D. Johnston, B.N. Tchao, D.N. Pak, K.L. Welton, D.E. Promislow, J.H. Thomas, M. Kaeberlein, and B.K. Kennedy Quantitative evidence for conserved longevity pathways between divergent eukaryotic species Genome Research 18 2008 564 570 (Pubitemid 351482781)
-
(2008)
Genome Research
, vol.18
, Issue.4
, pp. 564-570
-
-
Smith, E.D.1
Tsuchiya, M.2
Fox, L.A.3
Dang, N.4
Hu, D.5
Kerr, E.O.6
Johnston, E.D.7
Tchao, B.N.8
Pak, D.N.9
Welton, K.L.10
Promislow, D.E.L.11
Thomas, J.H.12
Kaeberlein, M.13
Kennedy, B.K.14
-
6
-
-
35348891430
-
Network-based classification of breast cancer metastasis
-
H.Y. Chuang, E. Lee, Y.T. Liu, D. Lee, and T. Ideker Network-based classification of breast cancer metastasis Molecular Systems Biology 3 2007 140
-
(2007)
Molecular Systems Biology
, vol.3
, pp. 140
-
-
Chuang, H.Y.1
Lee, E.2
Liu, Y.T.3
Lee, D.4
Ideker, T.5
-
7
-
-
77949493376
-
Prediction of pharmacological and xenobiotic responses to drugs based on time course gene expression profiles
-
T. Huang, W. Cui, L. Hu, K. Feng, Y.X. Li, and Y.D. Cai Prediction of pharmacological and xenobiotic responses to drugs based on time course gene expression profiles PLoS ONE 4 2009 e8126
-
(2009)
PLoS ONE
, vol.4
, pp. 8126
-
-
Huang, T.1
Cui, W.2
Hu, L.3
Feng, K.4
Li, Y.X.5
Cai, Y.D.6
-
8
-
-
77955199287
-
Analysis and prediction of the metabolic stability of proteins based on their sequential features, subcellular locations and interaction networks
-
T. Huang, X.H. Shi, P. Wang, Z. He, K.Y. Feng, L. Hu, X. Kong, Y.X. Li, Y.D. Cai, and K.C. Chou Analysis and prediction of the metabolic stability of proteins based on their sequential features, subcellular locations and interaction networks PLoS ONE 5 2010 e10972
-
(2010)
PLoS ONE
, vol.5
, pp. 10972
-
-
Huang, T.1
Shi, X.H.2
Wang, P.3
He, Z.4
Feng, K.Y.5
Hu, L.6
Kong, X.7
Li, Y.X.8
Cai, Y.D.9
Chou, K.C.10
-
9
-
-
79251548286
-
Analysis and prediction of translation rate based on sequence and functional features of the mRNA
-
T. Huang, S. Wan, Z. Xu, Y. Zheng, K.Y. Feng, H.P. Li, X. Kong, and Y.D. Cai Analysis and prediction of translation rate based on sequence and functional features of the mRNA PLoS ONE 6 2011 e16036
-
(2011)
PLoS ONE
, vol.6
, pp. 16036
-
-
Huang, T.1
Wan, S.2
Xu, Z.3
Zheng, Y.4
Feng, K.Y.5
Li, H.P.6
Kong, X.7
Cai, Y.D.8
-
10
-
-
59849125136
-
Dynamic modularity in protein interaction networks predicts breast cancer outcome
-
I.W. Taylor, R. Linding, D. Warde-Farley, Y. Liu, C. Pesquita, D. Faria, S. Bull, T. Pawson, Q. Morris, and J.L. Wrana Dynamic modularity in protein interaction networks predicts breast cancer outcome Nature Biotechnology 27 2009 199 204
-
(2009)
Nature Biotechnology
, vol.27
, pp. 199-204
-
-
Taylor, I.W.1
Linding, R.2
Warde-Farley, D.3
Liu, Y.4
Pesquita, C.5
Faria, D.6
Bull, S.7
Pawson, T.8
Morris, Q.9
Wrana, J.L.10
-
11
-
-
84857447161
-
Selection of reprogramming factors of induced pluripotent stem cells based on the protein interaction network and functional profiles
-
T. Huang, Y.D. Cai, L. Chen, L. Hu, X.Y. Kong, Y.X. Li, and K.C. Chou Selection of reprogramming factors of induced pluripotent stem cells based on the protein interaction network and functional profiles Protein and Peptide Letters 2011
-
(2011)
Protein and Peptide Letters
-
-
Huang, T.1
Cai, Y.D.2
Chen, L.3
Hu, L.4
Kong, X.Y.5
Li, Y.X.6
Chou, K.C.7
-
12
-
-
80053974587
-
Crosstissue coexpression network of aging
-
T. Huang, J. Zhang, L. Xie, X. Dong, L. Zhang, Y.D. Cai, and Y.X. Li Crosstissue coexpression network of aging Omics: A Journal of Integrative Biology 15 2011 665 671
-
(2011)
Omics: A Journal of Integrative Biology
, vol.15
, pp. 665-671
-
-
Huang, T.1
Zhang, J.2
Xie, L.3
Dong, X.4
Zhang, L.5
Cai, Y.D.6
Li, Y.X.7
-
13
-
-
79951859668
-
The role of Hepatitis C Virus in the dynamic protein interaction networks of hepatocellular cirrhosis and carcinoma
-
T. Huang, L. Liu, Q. Liu, G. Ding, Y. Tan, Z. Tu, Y. Li, H. Dai, and L. Xie The role of Hepatitis C Virus in the dynamic protein interaction networks of hepatocellular cirrhosis and carcinoma International Journal of Computational Biology and Drug Design 4 2011 5 18
-
(2011)
International Journal of Computational Biology and Drug Design
, vol.4
, pp. 5-18
-
-
Huang, T.1
Liu, L.2
Liu, Q.3
Ding, G.4
Tan, Y.5
Tu, Z.6
Li, Y.7
Dai, H.8
Xie, L.9
-
14
-
-
77954147517
-
Using GeneReg to construct time delay gene regulatory networks
-
T. Huang, L. Liu, Z. Qian, K. Tu, Y. Li, and L. Xie Using GeneReg to construct time delay gene regulatory networks BMC Res Notes 3 2010 142
-
(2010)
BMC Res Notes
, vol.3
, pp. 142
-
-
Huang, T.1
Liu, L.2
Qian, Z.3
Tu, K.4
Li, Y.5
Xie, L.6
-
15
-
-
77958024537
-
-
ACM Niagara Falls, New York
-
T. Huang, G. Ding, Y. Li, L. Liu, E. Tan, H. Dai, Q. Liu, Z. Tu, and L. Xie Dysfunctional Gene/protein Networks in Hepatitis C Virus-induced Hepatocellular Cirrhosis and Carcinoma, Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology 2010 ACM Niagara Falls, New York 502-507
-
(2010)
Dysfunctional Gene/protein Networks in Hepatitis C Virus-induced Hepatocellular Cirrhosis and Carcinoma, Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology
, pp. 502-507
-
-
Huang, T.1
Ding, G.2
Li, Y.3
Liu, L.4
Tan, E.5
Dai, H.6
Liu, Q.7
Tu, Z.8
Xie, L.9
-
16
-
-
78649903783
-
Systematic analysis and prediction of longevity genes in Caenorhabditis elegans
-
Y.H. Li, M.Q. Dong, and Z. Guo Systematic analysis and prediction of longevity genes in Caenorhabditis elegans Mechanisms of Ageing and Development 131 2010 700 709
-
(2010)
Mechanisms of Ageing and Development
, vol.131
, pp. 700-709
-
-
Li, Y.H.1
Dong, M.Q.2
Guo, Z.3
-
17
-
-
78651226104
-
A data mining approach for classifying DNA repair genes into ageing-related or non-ageing-related
-
A.A. Freitas, O. Vasieva, and J.P. de Magalhaes A data mining approach for classifying DNA repair genes into ageing-related or non-ageing-related BMC Genomics 12 2011 27
-
(2011)
BMC Genomics
, vol.12
, pp. 27
-
-
Freitas, A.A.1
Vasieva, O.2
De Magalhaes, J.P.3
-
18
-
-
79951518208
-
Some remarks on protein attribute prediction and pseudo amino acid composition
-
K.C. Chou Some remarks on protein attribute prediction and pseudo amino acid composition Journal of Theoretical Biology 273 2011 236 247
-
(2011)
Journal of Theoretical Biology
, vol.273
, pp. 236-247
-
-
Chou, K.C.1
-
19
-
-
3342976147
-
GenAge: A genomic and proteomic network map of human ageing
-
DOI 10.1016/j.febslet.2004.07.006, PII S0014579304008610
-
J.P. de Magalhaes, and O. Toussaint GenAge: a genomic and proteomic network map of human ageing FEBS Letters 571 2004 243 247 (Pubitemid 38992955)
-
(2004)
FEBS Letters
, vol.571
, Issue.1-3
, pp. 243-247
-
-
De Magalhaes, J.P.1
Toussaint, O.2
-
20
-
-
58149193234
-
STRING 8-A global view on proteins and their functional interactions in 630 organisms
-
L.J. Jensen, M. Kuhn, M. Stark, S. Chaffron, C. Creevey, J. Muller, T. Doerks, P. Julien, A. Roth, M. Simonovic, P. Bork, and C. von Mering STRING 8-a global view on proteins and their functional interactions in 630 organisms Nucleic Acids Research 37 2009 D412 D416
-
(2009)
Nucleic Acids Research
, vol.37
-
-
Jensen, L.J.1
Kuhn, M.2
Stark, M.3
Chaffron, S.4
Creevey, C.5
Muller, J.6
Doerks, T.7
Julien, P.8
Roth, A.9
Simonovic, M.10
Bork, P.11
Von Mering, C.12
-
21
-
-
0032054085
-
Prediction and classification of domain structural classes
-
DOI 10.1002/(SICI)1097-0134(19980401)31: 1<97::AID-PROT8>3.0.CO;2-E
-
K.C. Chou, W.M. Liu, G.M. Maggiora, and C.T. Zhang Prediction and classification of domain structural classes Proteins 31 1998 97 103 (Pubitemid 28180457)
-
(1998)
Proteins: Structure, Function and Genetics
, vol.31
, Issue.1
, pp. 97-103
-
-
Chou, K.-C.1
Liu, W.-M.2
Maggiora, G.M.3
Zhang, C.-T.4
-
22
-
-
34147120474
-
A note on two problems in connexion with graphs
-
E.W. Dijkstra A note on two problems in connexion with graphs Numerische Mathematik 1 1959 269 271
-
(1959)
Numerische Mathematik
, vol.1
, pp. 269-271
-
-
Dijkstra, E.W.1
-
23
-
-
0027181846
-
The quinoline U-78036 is a potent inhibitor of HIV-1 reverse transcriptase
-
I.W. Althaus, A.J. Gonzales, J.J. Chou, D.L. Romero, M.R. Deibel, K.C. Chou, F.J. Kezdy, L. Resnick, M.E. Busso, and A.G. So The quinoline U-78036 is a potent inhibitor of HIV-1 reverse transcriptase The Journal of Biological Chemistry 268 1993 14875 14880 (Pubitemid 23206633)
-
(1993)
Journal of Biological Chemistry
, vol.268
, Issue.20
, pp. 14875-14880
-
-
Althaus, I.W.1
Gonzales, A.J.2
Chou, J.J.3
Romero, D.L.4
Deibel, M.R.5
Chou -, K.C.6
Kezdy, F.J.7
Resnick, L.8
Busso, M.E.9
So, A.G.10
Downey, K.M.11
Thomas, R.C.12
Aristoff, P.A.13
Tarpley, W.G.14
Reusser, F.15
-
25
-
-
0019885786
-
Two new schematic rules for rate laws of enzyme-catalysed reactions
-
K.C. Chou Two new schematic rules for rate laws of enzyme-catalysed reactions Journal of Theoretical Biology 89 1981 581 592
-
(1981)
Journal of Theoretical Biology
, vol.89
, pp. 581-592
-
-
Chou, K.C.1
-
26
-
-
0024971003
-
Graphic rules in steady and non-steady state enzyme kinetics
-
K.C. Chou Graphic rules in steady and non-steady state enzyme kinetics The Journal of Biological Chemistry 264 1989 12074 12079
-
(1989)
The Journal of Biological Chemistry
, vol.264
, pp. 12074-12079
-
-
Chou, K.C.1
-
27
-
-
0025021607
-
Applications of graph theory to enzyme kinetics and protein folding kinetics. Steady and non-steady-state systems
-
K.C. Chou Applications of graph theory to enzyme kinetics and protein folding kinetics. Steady and non-steady-state systems Biophysical Chemistry 35 1990 1 24
-
(1990)
Biophysical Chemistry
, vol.35
, pp. 1-24
-
-
Chou, K.C.1
-
28
-
-
0019021450
-
Graphical rules for enzyme-catalysed rate laws
-
K.C. Chou, and S. Forsen Graphical rules for enzyme-catalysed rate laws The Biochemical Journal 187 1980 829 835
-
(1980)
The Biochemical Journal
, vol.187
, pp. 829-835
-
-
Chou, K.C.1
Forsen, S.2
-
29
-
-
77955673069
-
2D-MH: A web-server for generating graphic representation of protein sequences based on the physicochemical properties of their constituent amino acids
-
Z.C. Wu, X. Xiao, and K.C. Chou 2D-MH: a web-server for generating graphic representation of protein sequences based on the physicochemical properties of their constituent amino acids Journal of Theoretical Biology 267 2010 29 34
-
(2010)
Journal of Theoretical Biology
, vol.267
, pp. 29-34
-
-
Wu, Z.C.1
Xiao, X.2
Chou, K.C.3
-
30
-
-
79960604768
-
The disposition of the LZCC protein residues in wenxiang diagram provides new insights into the protein-protein interaction mechanism
-
G.P. Zhou The disposition of the LZCC protein residues in wenxiang diagram provides new insights into the protein-protein interaction mechanism Journal of Theoretical Biology 284 2011 142 148
-
(2011)
Journal of Theoretical Biology
, vol.284
, pp. 142-148
-
-
Zhou, G.P.1
-
31
-
-
0021764092
-
An extension of Chou's graphic rules for deriving enzyme kinetic equations to systems involving parallel reaction pathways
-
G.P. Zhou, and M.H. Deng An extension of Chou's graphic rules for deriving enzyme kinetic equations to systems involving parallel reaction pathways The Biochemical Journal 222 1984 169 176
-
(1984)
The Biochemical Journal
, vol.222
, pp. 169-176
-
-
Zhou, G.P.1
Deng, M.H.2
-
32
-
-
0033151954
-
Recognition of a protein fold in the context of the SCOP classification
-
DOI 10.1002/(SICI)1097-0134(19990601)35: 4<401::AID-PROT3>3.0.CO;2- K
-
I. Dubchak, I. Muchnik, C. Mayor, I. Dralyuk, and S.H. Kim Recognition of a protein fold in the context of the structural classification of proteins (SCOP) classification Proteins 35 1999 401 407 (Pubitemid 29264836)
-
(1999)
Proteins: Structure, Function and Genetics
, vol.35
, Issue.4
, pp. 401-407
-
-
Dubchak, I.1
Muchnik, I.2
Mayor, C.3
Dralyuk, I.4
Kim, S.-H.5
-
33
-
-
33847205295
-
GENECODIS: A web-based tool for finding significant concurrent annotations in gene lists
-
P. Carmona-Saez, M. Chagoyen, F. Tirado, J.M. Carazo, and A. Pascual-Montano GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists Genome Biology 8 2007 R3
-
(2007)
Genome Biology
, vol.8
, pp. 3
-
-
Carmona-Saez, P.1
Chagoyen, M.2
Tirado, F.3
Carazo, J.M.4
Pascual-Montano, A.5
-
34
-
-
77955645823
-
Prediction of deleterious non-synonymous SNPs based on protein interaction network and hybrid properties
-
T. Huang, P. Wang, Z.Q. Ye, H. Xu, Z. He, K.Y. Feng, L. Hu, W. Cui, K. Wang, X. Dong, L. Xie, X. Kong, Y.D. Cai, and Y. Li Prediction of deleterious non-synonymous SNPs based on protein interaction network and hybrid properties PLoS ONE 5 2010 e11900
-
(2010)
PLoS ONE
, vol.5
, pp. 11900
-
-
Huang, T.1
Wang, P.2
Ye, Z.Q.3
Xu, H.4
He, Z.5
Feng, K.Y.6
Hu, L.7
Cui, W.8
Wang, K.9
Dong, X.10
Xie, L.11
Kong, X.12
Cai, Y.D.13
Li, Y.14
-
35
-
-
79952350255
-
Computational analysis of HIV-1 resistance based on gene expression profiles and the virus-host interaction network
-
T. Huang, Z. Xu, L. Chen, Y.D. Cai, and X. Kong Computational analysis of HIV-1 resistance based on gene expression profiles and the virus-host interaction network PLoS ONE 6 2011 e17291
-
(2011)
PLoS ONE
, vol.6
, pp. 17291
-
-
Huang, T.1
Xu, Z.2
Chen, L.3
Cai, Y.D.4
Kong, X.5
-
36
-
-
33750177351
-
Centrality in social networks: Conceptual clarification
-
L.C. Freeman Centrality in social networks: conceptual clarification Social Networks 1 1979 215 239
-
(1979)
Social Networks
, vol.1
, pp. 215-239
-
-
Freeman, L.C.1
-
37
-
-
70549098217
-
Functional association between influenza A (H1N1) virus and human
-
T. Huang, W. Cui, Z.S. He, L. Hu, F. Liu, T. Wen, Y. Li, and Y. Cai Functional association between influenza A (H1N1) virus and human Biochemical and Biophysical Research Communication 390 2009 1111 1113
-
(2009)
Biochemical and Biophysical Research Communication
, vol.390
, pp. 1111-1113
-
-
Huang, T.1
Cui, W.2
He, Z.S.3
Hu, L.4
Liu, F.5
Wen, T.6
Li, Y.7
Cai, Y.8
-
39
-
-
24344458137
-
Feature selection based on mutual information: Criteria of Max-Dependency, Max-Relevance, and Min-Redundancy
-
DOI 10.1109/TPAMI.2005.159
-
H. Peng, F. Long, and C. Ding Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy IEEE Transactions on Pattern Analysis and Machine Intelligence 27 2005 1226 1238 (Pubitemid 41245053)
-
(2005)
IEEE Transactions on Pattern Analysis and Machine Intelligence
, vol.27
, Issue.8
, pp. 1226-1238
-
-
Peng, H.1
Long, F.2
Ding, C.3
-
40
-
-
84862649597
-
Prediction of lysine ubiquitination with mRMR feature selection and analysis
-
Y. Cai, T. Huang, L. Hu, X. Shi, L. Xie, and Y. Li Prediction of lysine ubiquitination with mRMR feature selection and analysis Amino Acids 2011
-
(2011)
Amino Acids
-
-
Cai, Y.1
Huang, T.2
Hu, L.3
Shi, X.4
Xie, L.5
Li, Y.6
-
41
-
-
77958573912
-
A Unified 35-Gene Signature for both subtype classification and survival prediction in diffuse large B-cell lymphomas
-
Y.D. Cai, T. Huang, K.Y. Feng, L. Hu, and L. Xie A Unified 35-Gene Signature for both subtype classification and survival prediction in diffuse large B-cell lymphomas PLoS ONE 5 2010
-
(2010)
PLoS ONE
, vol.5
-
-
Cai, Y.D.1
Huang, T.2
Feng, K.Y.3
Hu, L.4
Xie, L.5
-
42
-
-
80053220447
-
Classification and analysis of regulatory pathways using graph property, biochemical and physicochemical property, and functional property
-
T. Huang, L. Chen, Y.D. Cai, and K.C. Chou Classification and analysis of regulatory pathways using graph property, biochemical and physicochemical property, and functional property PLoS One 6 2011 e25297
-
(2011)
PLoS One
, vol.6
, pp. 25297
-
-
Huang, T.1
Chen, L.2
Cai, Y.D.3
Chou, K.C.4
-
43
-
-
79961193016
-
Predicting transcriptional activity of multiple site p53 mutants based on hybrid properties
-
T. Huang, S. Niu, Z. Xu, Y. Huang, X. Kong, Y.D. Cai, and K.C. Chou Predicting transcriptional activity of multiple site p53 mutants based on hybrid properties PLoS One 6 2011 e22940
-
(2011)
PLoS One
, vol.6
, pp. 22940
-
-
Huang, T.1
Niu, S.2
Xu, Z.3
Huang, Y.4
Kong, X.5
Cai, Y.D.6
Chou, K.C.7
-
44
-
-
84857449527
-
Predicting triplet of transcription factor - Mediating enzyme - Target gene by functional profiles
-
T. Huang, L. Chen, X.-J. Liu, and Y.-D. Cai Predicting triplet of transcription factor - mediating enzyme - target gene by functional profiles Neurocomputing 74 2011 3677 3681
-
(2011)
Neurocomputing
, vol.74
, pp. 3677-3681
-
-
Huang, T.1
Chen, L.2
Liu, X.-J.3
Cai, Y.-D.4
-
46
-
-
0029051959
-
A novel approach to predicting protein structural classes in a (20-1)-D amino acid composition space
-
K.C. Chou A novel approach to predicting protein structural classes in a (20-1)-D amino acid composition space Proteins 21 1995 319 344
-
(1995)
Proteins
, vol.21
, pp. 319-344
-
-
Chou, K.C.1
-
47
-
-
77956199192
-
Plant-mPLoc: A top-down strategy to augment the power for predicting plant protein subcellular localization
-
K.C. Chou, and H.B. Shen Plant-mPLoc: a top-down strategy to augment the power for predicting plant protein subcellular localization PLoS One 5 2010 e11335
-
(2010)
PLoS One
, vol.5
, pp. 11335
-
-
Chou, K.C.1
Shen, H.B.2
-
49
-
-
52749089141
-
The prediction of interferon treatment effects based on time series microarray gene expression profiles
-
T. Huang, K. Tu, Y. Shyr, C.C. Wei, L. Xie, and Y.X. Li The prediction of interferon treatment effects based on time series microarray gene expression profiles Journal of Translational Medicine 6 2008 44
-
(2008)
Journal of Translational Medicine
, vol.6
, pp. 44
-
-
Huang, T.1
Tu, K.2
Shyr, Y.3
Wei, C.C.4
Xie, L.5
Li, Y.X.6
-
50
-
-
39449105071
-
Cell-PLoc: A package of web servers for predicting subcellular localization of proteins in various organisms
-
K.C. Chou, and H.B. Shen Cell-PLoc: a package of web servers for predicting subcellular localization of proteins in various organisms Nature Protocols 3 2008 153 162
-
(2008)
Nature Protocols
, vol.3
, pp. 153-162
-
-
Chou, K.C.1
Shen, H.B.2
-
51
-
-
79953316878
-
ILoc-Euk: A multi-label classifier for predicting the subcellular localization of singleplex and multiplex eukaryotic proteins
-
K.C. Chou, Z.C. Wu, and X. Xiao iLoc-Euk: a multi-label classifier for predicting the subcellular localization of singleplex and multiplex eukaryotic proteins PLoS One 6 2011 e18258
-
(2011)
PLoS One
, vol.6
, pp. 18258
-
-
Chou, K.C.1
Wu, Z.C.2
Xiao, X.3
-
52
-
-
65349165718
-
Prediction of cell wall lytic enzymes using Chou's amphiphilic pseudo amino acid composition
-
H. Ding, L. Luo, and H. Lin Prediction of cell wall lytic enzymes using Chou's amphiphilic pseudo amino acid composition Protein and Peptide Letters 16 2009 351 355
-
(2009)
Protein and Peptide Letters
, vol.16
, pp. 351-355
-
-
Ding, H.1
Luo, L.2
Lin, H.3
-
53
-
-
77649337793
-
Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
-
M. Esmaeili, H. Mohabatkar, and S. Mohsenzadeh Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses Journal of Theoretical Biology 263 2010 203 209
-
(2010)
Journal of Theoretical Biology
, vol.263
, pp. 203-209
-
-
Esmaeili, M.1
Mohabatkar, H.2
Mohsenzadeh, S.3
-
54
-
-
77951992931
-
Prediction of G-protein-coupled receptor classes in low homology using Chou's pseudo amino acid composition with approximate entropy and hydrophobicity patterns
-
Q. Gu, Y.S. Ding, and T.L. Zhang Prediction of G-protein-coupled receptor classes in low homology using Chou's pseudo amino acid composition with approximate entropy and hydrophobicity patterns Protein and Peptide Letters 17 2010 559 567
-
(2010)
Protein and Peptide Letters
, vol.17
, pp. 559-567
-
-
Gu, Q.1
Ding, Y.S.2
Zhang, T.L.3
-
55
-
-
77958497871
-
Prediction of cyclin proteins using Chou's pseudo amino acid composition
-
H. Mohabatkar Prediction of cyclin proteins using Chou's pseudo amino acid composition Protein and Peptide Letters 17 2010 1207 1214
-
(2010)
Protein and Peptide Letters
, vol.17
, pp. 1207-1214
-
-
Mohabatkar, H.1
-
56
-
-
78649324596
-
A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
-
S.S. Sahu, and G. Panda A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction Computational Biology and Chemistry 34 2010 320 327
-
(2010)
Computational Biology and Chemistry
, vol.34
, pp. 320-327
-
-
Sahu, S.S.1
Panda, G.2
-
57
-
-
79959667141
-
ILoc-Virus: A multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
-
X. Xiao, Z.C. Wu, and K.C. Chou iLoc-Virus: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites Journal of Theoretical Biology 284 2011 42 51
-
(2011)
Journal of Theoretical Biology
, vol.284
, pp. 42-51
-
-
Xiao, X.1
Wu, Z.C.2
Chou, K.C.3
-
58
-
-
67349244013
-
Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach
-
Y.H. Zeng, Y.Z. Guo, R.Q. Xiao, L. Yang, L.Z. Yu, and M.L. Li Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach Journal of Theoretical Biology 259 2009 366 372
-
(2009)
Journal of Theoretical Biology
, vol.259
, pp. 366-372
-
-
Zeng, Y.H.1
Guo, Y.Z.2
Xiao, R.Q.3
Yang, L.4
Yu, L.Z.5
Li, M.L.6
-
59
-
-
0033931867
-
Assessing the accuracy of prediction algorithms for classification: An overview
-
P. Baldi, S. Brunak, Y. Chauvin, C.A. Andersen, and H. Nielsen Assessing the accuracy of prediction algorithms for classification: an overview Bioinformatics 16 2000 412 424 (Pubitemid 30487963)
-
(2000)
Bioinformatics
, vol.16
, Issue.5
, pp. 412-424
-
-
Baldi, P.1
Brunak, S.2
Chauvin, Y.3
Andersen, C.A.F.4
Nielsen, H.5
-
60
-
-
80051676719
-
NR-2L: A two-level predictor for identifying nuclear receptor subfamilies based on sequence-derived features
-
P. Wang, X. Xiao, and K.C. Chou NR-2L: a two-level predictor for identifying nuclear receptor subfamilies based on sequence-derived features PLoS One 6 2011 e23505
-
(2011)
PLoS One
, vol.6
, pp. 23505
-
-
Wang, P.1
Xiao, X.2
Chou, K.C.3
-
61
-
-
34447095147
-
MemType-2L: A web server for predicting membrane proteins and their types by incorporating evolution information through Pse-PSSM
-
K.C. Chou, and H.B. Shen MemType-2L: a web server for predicting membrane proteins and their types by incorporating evolution information through Pse-PSSM Biochemical and Biophysical Research Communication 360 2007 339 345
-
(2007)
Biochemical and Biophysical Research Communication
, vol.360
, pp. 339-345
-
-
Chou, K.C.1
Shen, H.B.2
-
62
-
-
79951606205
-
GPCR-2L: Predicting G protein-coupled receptors and their types by hybridizing two different modes of pseudo amino acid compositions
-
X. Xiao, P. Wang, and K.C. Chou GPCR-2L: predicting G protein-coupled receptors and their types by hybridizing two different modes of pseudo amino acid compositions Molecular BioSystems 7 2011 911 919
-
(2011)
Molecular BioSystems
, vol.7
, pp. 911-919
-
-
Xiao, X.1
Wang, P.2
Chou, K.C.3
-
63
-
-
73749087580
-
Mitochondrial function as a determinant of life span, Pflugers archiv
-
I.R. Lanza, and K.S. Nair Mitochondrial function as a determinant of life span, Pflugers archiv European Journal of Physiology 459 2010 277 289
-
(2010)
European Journal of Physiology
, vol.459
, pp. 277-289
-
-
Lanza, I.R.1
Nair, K.S.2
-
64
-
-
83555165129
-
Cell division and aging of the organism
-
A. Macieira-Coelho Cell division and aging of the organism Biogerontology 2011
-
(2011)
Biogerontology
-
-
MacIeira-Coelho, A.1
-
65
-
-
0034193776
-
Sir2 links chromatin silencing, metabolism, and aging
-
L. Guarente Sir2 links chromatin silencing, metabolism, and aging Genes & Development 14 2000 1021 1026 (Pubitemid 30324417)
-
(2000)
Genes and Development
, vol.14
, Issue.9
, pp. 1021-1026
-
-
Guarente, L.1
-
66
-
-
56749156405
-
SIRT1 redistribution on chromatin promotes genomic stability but alters gene expression during aging
-
P. Oberdoerffer, S. Michan, M. McVay, R. Mostoslavsky, J. Vann, S.K. Park, A. Hartlerode, J. Stegmuller, A. Hafner, P. Loerch, S.M. Wright, K.D. Mills, A. Bonni, B.A. Yankner, R. Scully, T.A. Prolla, F.W. Alt, and D.A. Sinclair SIRT1 redistribution on chromatin promotes genomic stability but alters gene expression during aging Cell 135 2008 907 918
-
(2008)
Cell
, vol.135
, pp. 907-918
-
-
Oberdoerffer, P.1
Michan, S.2
McVay, M.3
Mostoslavsky, R.4
Vann, J.5
Park, S.K.6
Hartlerode, A.7
Stegmuller, J.8
Hafner, A.9
Loerch, P.10
Wright, S.M.11
Mills, K.D.12
Bonni, A.13
Yankner, B.A.14
Scully, R.15
Prolla, T.A.16
Alt, F.W.17
Sinclair, D.A.18
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