-
1
-
-
33745901282
-
Regulation of the Helicobacter pylori Fe-S cluster synthesis protein NifS by iron, oxidative stress conditions, and fur
-
Alamuri, P., Mehta, N., Burk, A., and Maier, R.J. (2006) Regulation of the Helicobacter pylori Fe-S cluster synthesis protein NifS by iron, oxidative stress conditions, and fur. J Bacteriol 188: 5325-5330.
-
(2006)
J Bacteriol
, vol.188
, pp. 5325-5330
-
-
Alamuri, P.1
Mehta, N.2
Burk, A.3
Maier, R.J.4
-
2
-
-
0028290240
-
Possible role of Helicobacter pylori infection in early gastric cancer development
-
Asaka, M., Kimura, T., Kato, M., Kudo, M., Miki, K., Ogoshi, K., etal. (1994) Possible role of Helicobacter pylori infection in early gastric cancer development. Cancer 73: 2691-2694.
-
(1994)
Cancer
, vol.73
, pp. 2691-2694
-
-
Asaka, M.1
Kimura, T.2
Kato, M.3
Kudo, M.4
Miki, K.5
Ogoshi, K.6
-
3
-
-
10044238898
-
Metastability of Helicobacter pylori bab adhesin genes and dynamics in Lewis b antigen binding
-
Backstrom, A., Lundberg, C., Kersulyte, D., Berg, D.E., Boren, T., and Arnqvist, A. (2004) Metastability of Helicobacter pylori bab adhesin genes and dynamics in Lewis b antigen binding. Proc Natl Acad Sci USA 101: 16923-16928.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 16923-16928
-
-
Backstrom, A.1
Lundberg, C.2
Kersulyte, D.3
Berg, D.E.4
Boren, T.5
Arnqvist, A.6
-
4
-
-
0036837766
-
Recognition of DNA by Fur: a reinterpretation of the Fur box consensus sequence
-
Baichoo, N., and Helmann, J.D. (2002) Recognition of DNA by Fur: a reinterpretation of the Fur box consensus sequence. J Bacteriol 184: 5826-5832.
-
(2002)
J Bacteriol
, vol.184
, pp. 5826-5832
-
-
Baichoo, N.1
Helmann, J.D.2
-
5
-
-
58149483353
-
The complete genome sequence of Helicobacter pylori strain G27
-
Baltrus, D.A., Amieva, M.R., Covacci, A., Lowe, T.M., Merrell, D.S., Ottemann, K.M., etal. (2009) The complete genome sequence of Helicobacter pylori strain G27. J Bacteriol 191: 447-448.
-
(2009)
J Bacteriol
, vol.191
, pp. 447-448
-
-
Baltrus, D.A.1
Amieva, M.R.2
Covacci, A.3
Lowe, T.M.4
Merrell, D.S.5
Ottemann, K.M.6
-
6
-
-
0030741916
-
Identification and characterization of an operon of Helicobacter pylori that is involved in motility and stress adaptation
-
Beier, D., Spohn, G., Rappuoli, R., and Scarlato, V. (1997) Identification and characterization of an operon of Helicobacter pylori that is involved in motility and stress adaptation. J Bacteriol 179: 4676-4683.
-
(1997)
J Bacteriol
, vol.179
, pp. 4676-4683
-
-
Beier, D.1
Spohn, G.2
Rappuoli, R.3
Scarlato, V.4
-
7
-
-
0032823648
-
The ferric uptake regulator (Fur) homologue of Helicobacter pylori: functional analysis of the coding gene and controlled production of the recombinant protein in Escherichia coli
-
Bereswill, S., Lichte, F., Greiner, S., Waidner, B., Fassbinder, F., and Kist, M. (1999) The ferric uptake regulator (Fur) homologue of Helicobacter pylori: functional analysis of the coding gene and controlled production of the recombinant protein in Escherichia coli. Med Microbiol Immunol 188: 31-40.
-
(1999)
Med Microbiol Immunol
, vol.188
, pp. 31-40
-
-
Bereswill, S.1
Lichte, F.2
Greiner, S.3
Waidner, B.4
Fassbinder, F.5
Kist, M.6
-
8
-
-
0036156091
-
The Helicobacter pylori homologue of the ferric uptake regulator is involved in acid resistance
-
Bijlsma, J.J., Waidner, B., Vliet, A.H., Hughes, N.J., Hag, S., Bereswill, S., etal. (2002) The Helicobacter pylori homologue of the ferric uptake regulator is involved in acid resistance. Infect Immun 70: 606-611.
-
(2002)
Infect Immun
, vol.70
, pp. 606-611
-
-
Bijlsma, J.J.1
Waidner, B.2
Vliet, A.H.3
Hughes, N.J.4
Hag, S.5
Bereswill, S.6
-
9
-
-
0031610907
-
Bacterial iron transport: mechanisms, genetics, and regulation
-
Braun, V., Hantke, K., and Koster, W. (1998) Bacterial iron transport: mechanisms, genetics, and regulation. Met Ions Biol Syst 35: 67-145.
-
(1998)
Met Ions Biol Syst
, vol.35
, pp. 67-145
-
-
Braun, V.1
Hantke, K.2
Koster, W.3
-
10
-
-
0031850630
-
Bacillus subtilis contains multiple Fur homologues: identification of the iron uptake (Fur) and peroxide regulon (PerR) repressors
-
Bsat, N., Herbig, A., Casillas-Martinez, L., Setlow, P., and Helmann, J.D. (1998) Bacillus subtilis contains multiple Fur homologues: identification of the iron uptake (Fur) and peroxide regulon (PerR) repressors. Mol Microbiol 29: 189-198.
-
(1998)
Mol Microbiol
, vol.29
, pp. 189-198
-
-
Bsat, N.1
Herbig, A.2
Casillas-Martinez, L.3
Setlow, P.4
Helmann, J.D.5
-
11
-
-
3242881125
-
Responsiveness to acidity via metal ion regulators mediates virulence in the gastric pathogen Helicobacter pylori
-
Bury-Mone, S., Thiberge, J.M., Contreras, M., Maitournam, A., Labigne, A., and De Reuse, H. (2004) Responsiveness to acidity via metal ion regulators mediates virulence in the gastric pathogen Helicobacter pylori. Mol Microbiol 53: 623-638.
-
(2004)
Mol Microbiol
, vol.53
, pp. 623-638
-
-
Bury-Mone, S.1
Thiberge, J.M.2
Contreras, M.3
Maitournam, A.4
Labigne, A.5
De Reuse, H.6
-
12
-
-
0023631217
-
Iron regulation of Shiga-like toxin expression in Escherichia coli is mediated by the fur locus
-
Calderwood, S.B., and Mekalanos, J.J. (1987) Iron regulation of Shiga-like toxin expression in Escherichia coli is mediated by the fur locus. J Bacteriol 169: 4759-4764.
-
(1987)
J Bacteriol
, vol.169
, pp. 4759-4764
-
-
Calderwood, S.B.1
Mekalanos, J.J.2
-
13
-
-
0023955601
-
Confirmation of the Fur operator site by insertion of a synthetic oligonucleotide into an operon fusion plasmid
-
Calderwood, S.B., and Mekalanos, J.J. (1988) Confirmation of the Fur operator site by insertion of a synthetic oligonucleotide into an operon fusion plasmid. J Bacteriol 170: 1015-1017.
-
(1988)
J Bacteriol
, vol.170
, pp. 1015-1017
-
-
Calderwood, S.B.1
Mekalanos, J.J.2
-
14
-
-
38949214833
-
Secretion of flavins by Shewanella species and their role in extracellular electron transfer
-
von Canstein, H., Ogawa, J., Shimizu, S., and Lloyd, J.R. (2008) Secretion of flavins by Shewanella species and their role in extracellular electron transfer. Appl Environ Microbiol 74: 615-623.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 615-623
-
-
von Canstein, H.1
Ogawa, J.2
Shimizu, S.3
Lloyd, J.R.4
-
15
-
-
38449109207
-
Expanding the Helicobacter pylori genetic toolbox: modification of an endogenous plasmid for use as a transcriptional reporter and complementation vector
-
Carpenter, B.M., McDaniel, T.K., Whitmire, J.M., Gancz, H., Guidotti, S., Censini, S., and Merrell, D.S. (2007) Expanding the Helicobacter pylori genetic toolbox: modification of an endogenous plasmid for use as a transcriptional reporter and complementation vector. Appl Environ Microbiol 73: 7506-7514.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 7506-7514
-
-
Carpenter, B.M.1
McDaniel, T.K.2
Whitmire, J.M.3
Gancz, H.4
Guidotti, S.5
Censini, S.6
Merrell, D.S.7
-
16
-
-
65449169592
-
A single nucleotide change affects fur-dependent regulation of sodB in H. pylori
-
Carpenter, B.M., Gancz, H., Gonzalez-Nieves, R.P., West, A.L., Whitmire, J.M., Michel, S.L., and Merrell, D.S. (2009) A single nucleotide change affects fur-dependent regulation of sodB in H. pylori. PLoS ONE 4: e5369.
-
(2009)
PLoS ONE
, vol.4
-
-
Carpenter, B.M.1
Gancz, H.2
Gonzalez-Nieves, R.P.3
West, A.L.4
Whitmire, J.M.5
Michel, S.L.6
Merrell, D.S.7
-
17
-
-
77957370152
-
Mutagenesis of conserved amino acids of Helicobacter pylori fur reveals residues important for function
-
Carpenter, B.M., Gancz, H., Benoit, S.L., Evans, S., Olsen, C.H., Michel, S.L., etal. (2010) Mutagenesis of conserved amino acids of Helicobacter pylori fur reveals residues important for function. J Bacteriol 192: 5037-5052.
-
(2010)
J Bacteriol
, vol.192
, pp. 5037-5052
-
-
Carpenter, B.M.1
Gancz, H.2
Benoit, S.L.3
Evans, S.4
Olsen, C.H.5
Michel, S.L.6
-
18
-
-
36749031105
-
Discovery of Fur binding site clusters in Escherichia coli by information theory models
-
Chen, Z., Lewis, K.A., Shultzaberger, R.K., Lyakhov, I.G., Zheng, M., Doan, B., etal. (2007) Discovery of Fur binding site clusters in Escherichia coli by information theory models. Nucleic Acids Res 35: 6762-6777.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 6762-6777
-
-
Chen, Z.1
Lewis, K.A.2
Shultzaberger, R.K.3
Lyakhov, I.G.4
Zheng, M.5
Doan, B.6
-
19
-
-
0032982703
-
Essential role of Helicobacter pylori gamma-glutamyltranspeptidase for the colonization of the gastric mucosa of mice
-
Chevalier, C., Thiberge, J.M., Ferrero, R.L., and Labigne, A. (1999) Essential role of Helicobacter pylori gamma-glutamyltranspeptidase for the colonization of the gastric mucosa of mice. Mol Microbiol 31: 1359-1372.
-
(1999)
Mol Microbiol
, vol.31
, pp. 1359-1372
-
-
Chevalier, C.1
Thiberge, J.M.2
Ferrero, R.L.3
Labigne, A.4
-
20
-
-
0031001363
-
Introduction of unmarked mutations in the Helicobacter pylori vacA gene with a sucrose sensitivity marker
-
Copass, M., Grandi, G., and Rappuoli, R. (1997) Introduction of unmarked mutations in the Helicobacter pylori vacA gene with a sucrose sensitivity marker. Infect Immun 65: 1949-1952.
-
(1997)
Infect Immun
, vol.65
, pp. 1949-1952
-
-
Copass, M.1
Grandi, G.2
Rappuoli, R.3
-
21
-
-
2142738304
-
WebLogo: a sequence logo generator
-
Crooks, G.E., Hon, G., Chandonia, J.M., and Brenner, S.E. (2004) WebLogo: a sequence logo generator. Genome Res 14: 1188-1190.
-
(2004)
Genome Res
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
-
22
-
-
33745460953
-
In vivo dissection of the Helicobacter pylori Fur regulatory circuit by genome-wide location analysis
-
Danielli, A., Roncarati, D., Delany, I., Chiarini, V., Rappuoli, R., and Scarlato, V. (2006) In vivo dissection of the Helicobacter pylori Fur regulatory circuit by genome-wide location analysis. J Bacteriol 188: 4654-4662.
-
(2006)
J Bacteriol
, vol.188
, pp. 4654-4662
-
-
Danielli, A.1
Roncarati, D.2
Delany, I.3
Chiarini, V.4
Rappuoli, R.5
Scarlato, V.6
-
23
-
-
66149112914
-
Growth phase and metal-dependent transcriptional regulation of the fecA genes in Helicobacter pylori
-
Danielli, A., Romagnoli, S., Roncarati, D., Costantino, L., Delany, I., and Scarlato, V. (2009) Growth phase and metal-dependent transcriptional regulation of the fecA genes in Helicobacter pylori. J Bacteriol 191: 3717-3725.
-
(2009)
J Bacteriol
, vol.191
, pp. 3717-3725
-
-
Danielli, A.1
Romagnoli, S.2
Roncarati, D.3
Costantino, L.4
Delany, I.5
Scarlato, V.6
-
24
-
-
0034902772
-
Iron-dependent transcription of the frpB gene of Helicobacter pylori is controlled by the Fur repressor protein
-
Delany, I., Pacheco, A.B., Spohn, G., Rappuoli, R., and Scarlato, V. (2001) Iron-dependent transcription of the frpB gene of Helicobacter pylori is controlled by the Fur repressor protein. J Bacteriol 183: 4932-4937.
-
(2001)
J Bacteriol
, vol.183
, pp. 4932-4937
-
-
Delany, I.1
Pacheco, A.B.2
Spohn, G.3
Rappuoli, R.4
Scarlato, V.5
-
25
-
-
0036436311
-
Autoregulation of Helicobacter pylori Fur revealed by functional analysis of the iron-binding site
-
Delany, I., Spohn, G., Pacheco, A.B., Ieva, R., Alaimo, C., Rappuoli, R., and Scarlato, V. (2002) Autoregulation of Helicobacter pylori Fur revealed by functional analysis of the iron-binding site. Mol Microbiol 46: 1107-1122.
-
(2002)
Mol Microbiol
, vol.46
, pp. 1107-1122
-
-
Delany, I.1
Spohn, G.2
Pacheco, A.B.3
Ieva, R.4
Alaimo, C.5
Rappuoli, R.6
Scarlato, V.7
-
26
-
-
0344394987
-
An anti-repression Fur operator upstream of the promoter is required for iron-mediated transcriptional autoregulation in Helicobacter pylori
-
Delany, I., Spohn, G., Rappuoli, R., and Scarlato, V. (2003) An anti-repression Fur operator upstream of the promoter is required for iron-mediated transcriptional autoregulation in Helicobacter pylori. Mol Microbiol 50: 1329-1338.
-
(2003)
Mol Microbiol
, vol.50
, pp. 1329-1338
-
-
Delany, I.1
Spohn, G.2
Rappuoli, R.3
Scarlato, V.4
-
27
-
-
3042816068
-
Fur functions as an activator and as a repressor of putative virulence genes in Neisseria meningitidis
-
Delany, I., Rappuoli, R., and Scarlato, V. (2004) Fur functions as an activator and as a repressor of putative virulence genes in Neisseria meningitidis. Mol Microbiol 52: 1081-1090.
-
(2004)
Mol Microbiol
, vol.52
, pp. 1081-1090
-
-
Delany, I.1
Rappuoli, R.2
Scarlato, V.3
-
28
-
-
27744481253
-
In vitro analysis of protein-operator interactions of the NikR and fur metal-responsive regulators of coregulated genes in Helicobacter pylori
-
Delany, I., Ieva, R., Soragni, A., Hilleringmann, M., Rappuoli, R., and Scarlato, V. (2005) In vitro analysis of protein-operator interactions of the NikR and fur metal-responsive regulators of coregulated genes in Helicobacter pylori. J Bacteriol 187: 7703-7715.
-
(2005)
J Bacteriol
, vol.187
, pp. 7703-7715
-
-
Delany, I.1
Ieva, R.2
Soragni, A.3
Hilleringmann, M.4
Rappuoli, R.5
Scarlato, V.6
-
29
-
-
79951777617
-
The structure of the Helicobacter pylori ferric uptake regulator Fur reveals three functional metal binding sites
-
Dian, C., Vitale, S., Leonard, G.A., Bahlawane, C., Fauquant, C., Leduc, D., etal. (2011) The structure of the Helicobacter pylori ferric uptake regulator Fur reveals three functional metal binding sites. Mol Microbiol 79: 1260-1275.
-
(2011)
Mol Microbiol
, vol.79
, pp. 1260-1275
-
-
Dian, C.1
Vitale, S.2
Leonard, G.A.3
Bahlawane, C.4
Fauquant, C.5
Leduc, D.6
-
30
-
-
14044268800
-
Transcriptional profiling of Helicobacter pylori Fur- and iron-regulated gene expression
-
Ernst, F.D., Bereswill, S., Waidner, B., Stoof, J., Mader, U., Kusters, J.G., etal. (2005) Transcriptional profiling of Helicobacter pylori Fur- and iron-regulated gene expression. Microbiology 151: 533-546.
-
(2005)
Microbiology
, vol.151
, pp. 533-546
-
-
Ernst, F.D.1
Bereswill, S.2
Waidner, B.3
Stoof, J.4
Mader, U.5
Kusters, J.G.6
-
31
-
-
33845488317
-
NikR mediates nickel-responsive transcriptional repression of the Helicobacter pylori outer membrane proteins FecA3 (HP1400) and FrpB4 (HP1512)
-
Ernst, F.D., Stoof, J., Horrevoets, W.M., Kuipers, E.J., Kusters, J.G., and van Vliet, A.H. (2006) NikR mediates nickel-responsive transcriptional repression of the Helicobacter pylori outer membrane proteins FecA3 (HP1400) and FrpB4 (HP1512). Infect Immun 74: 6821-6828.
-
(2006)
Infect Immun
, vol.74
, pp. 6821-6828
-
-
Ernst, F.D.1
Stoof, J.2
Horrevoets, W.M.3
Kuipers, E.J.4
Kusters, J.G.5
van Vliet, A.H.6
-
32
-
-
0032544080
-
Identification of an UP element consensus sequence for bacterial promoters
-
Estrem, S.T., Gaal, T., Ross, W., and Gourse, R.L. (1998) Identification of an UP element consensus sequence for bacterial promoters. Proc Natl Acad Sci USA 95: 9761-9766.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 9761-9766
-
-
Estrem, S.T.1
Gaal, T.2
Ross, W.3
Gourse, R.L.4
-
33
-
-
0034653295
-
Identification of iron-regulated genes of Helicobacter pylori by a modified fur titration assay (FURTA-Hp)
-
Fassbinder, F., van Vliet, A.H., Gimmel, V., Kusters, J.G., Kist, M., and Bereswill, S. (2000) Identification of iron-regulated genes of Helicobacter pylori by a modified fur titration assay (FURTA-Hp). FEMS Microbiol Lett 184: 225-229.
-
(2000)
FEMS Microbiol Lett
, vol.184
, pp. 225-229
-
-
Fassbinder, F.1
van Vliet, A.H.2
Gimmel, V.3
Kusters, J.G.4
Kist, M.5
Bereswill, S.6
-
34
-
-
81355146607
-
Gastric epithelial cell death caused by Helicobacter suis and Helicobacter pylori gamma-glutamyl transpeptidase is mainly glutathione degradation-dependent
-
Flahou, B., Haesebrouck, F., Chiers, K., Van Deun, K., De Smet, L., Devreese, B., etal. (2011) Gastric epithelial cell death caused by Helicobacter suis and Helicobacter pylori gamma-glutamyl transpeptidase is mainly glutathione degradation-dependent. Cell Microbiol 13: 1933-1955.
-
(2011)
Cell Microbiol
, vol.13
, pp. 1933-1955
-
-
Flahou, B.1
Haesebrouck, F.2
Chiers, K.3
Van Deun, K.4
De Smet, L.5
Devreese, B.6
-
35
-
-
0030344887
-
Helicobacter pylori and gastric cancer
-
Forman, D. (1996) Helicobacter pylori and gastric cancer. Scand J Gastroenterol Suppl 220: 23-26.
-
(1996)
Scand J Gastroenterol Suppl
, vol.220
, pp. 23-26
-
-
Forman, D.1
-
36
-
-
0142214661
-
Recognition of DNA by three ferric uptake regulator (Fur) homologs in Bacillus subtilis
-
Fuangthong, M., and Helmann, J.D. (2003) Recognition of DNA by three ferric uptake regulator (Fur) homologs in Bacillus subtilis. J Bacteriol 185: 6348-6357.
-
(2003)
J Bacteriol
, vol.185
, pp. 6348-6357
-
-
Fuangthong, M.1
Helmann, J.D.2
-
37
-
-
0036889461
-
Functional analysis of the Bacillus subtilis Zur regulon
-
Gaballa, A., Wang, T., Ye, R.W., and Helmann, J.D. (2002) Functional analysis of the Bacillus subtilis Zur regulon. J Bacteriol 184: 6508-6514.
-
(2002)
J Bacteriol
, vol.184
, pp. 6508-6514
-
-
Gaballa, A.1
Wang, T.2
Ye, R.W.3
Helmann, J.D.4
-
38
-
-
79955739012
-
The Helicobacter pylori ferric uptake refulator (Fur) is essential for growth under sodium chloride stress
-
Gancz, H., and Merrell, D.S. (2011) The Helicobacter pylori ferric uptake refulator (Fur) is essential for growth under sodium chloride stress. J Microbiol 49: 294-298.
-
(2011)
J Microbiol
, vol.49
, pp. 294-298
-
-
Gancz, H.1
Merrell, D.S.2
-
39
-
-
29644439241
-
Iron and pH homeostasis intersect at the level of Fur regulation in the gastric pathogen Helicobacter pylori
-
Gancz, H., Censini, S., and Merrell, D.S. (2006) Iron and pH homeostasis intersect at the level of Fur regulation in the gastric pathogen Helicobacter pylori. Infect Immun 74: 602-614.
-
(2006)
Infect Immun
, vol.74
, pp. 602-614
-
-
Gancz, H.1
Censini, S.2
Merrell, D.S.3
-
40
-
-
41949127541
-
The iron-responsive Fur regulon in Yersinia pestis
-
Gao, H., Zhou, D., Li, Y., Guo, Z., Han, Y., Song, Y., etal. (2008) The iron-responsive Fur regulon in Yersinia pestis. J Bacteriol 190: 3063-3075.
-
(2008)
J Bacteriol
, vol.190
, pp. 3063-3075
-
-
Gao, H.1
Zhou, D.2
Li, Y.3
Guo, Z.4
Han, Y.5
Song, Y.6
-
41
-
-
79952131950
-
Vitamin B6 is required for full motility and virulence in Helicobacter pylori. 1
-
Grubman, A., Phillips, A., Thibonnier, M., Kaparakis-Liaskos, M., Johnson, C., Thiberge, J.M., etal. (2010) Vitamin B6 is required for full motility and virulence in Helicobacter pylori. 1. MBio 1: e00112-10.
-
(2010)
MBio
, vol.1
-
-
Grubman, A.1
Phillips, A.2
Thibonnier, M.3
Kaparakis-Liaskos, M.4
Johnson, C.5
Thiberge, J.M.6
-
42
-
-
0020959710
-
Studies on transformation of Escherichia coli with plasmids
-
Hanahan, D. (1983) Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166: 557-580.
-
(1983)
J Mol Biol
, vol.166
, pp. 557-580
-
-
Hanahan, D.1
-
43
-
-
78649630300
-
Fur is required for the activation of virulence gene expression through the induction of the sae regulatory system in Staphylococcus aureus
-
Johnson, M., Sengupta, M., Purves, J., Tarrant, E., Williams, P.H., Cockayne, A., etal. (2011) Fur is required for the activation of virulence gene expression through the induction of the sae regulatory system in Staphylococcus aureus. Int J Med Microbiol 301: 44-52.
-
(2011)
Int J Med Microbiol
, vol.301
, pp. 44-52
-
-
Johnson, M.1
Sengupta, M.2
Purves, J.3
Tarrant, E.4
Williams, P.H.5
Cockayne, A.6
-
44
-
-
46449111827
-
Characterization of a Helicobacter hepaticus putA mutant strain in host colonization and oxidative stress
-
Krishnan, N., Doster, A.R., Duhamel, G.E., and Becker, D.F. (2008) Characterization of a Helicobacter hepaticus putA mutant strain in host colonization and oxidative stress. Infect Immun 76: 3037-3044.
-
(2008)
Infect Immun
, vol.76
, pp. 3037-3044
-
-
Krishnan, N.1
Doster, A.R.2
Duhamel, G.E.3
Becker, D.F.4
-
45
-
-
0027295666
-
The minus 35-recognition region of Escherichia coli sigma 70 is inessential for initiation of transcription at an 'extended minus 10' promoter
-
Kumar, A., Malloch, R.A., Fujita, N., Smillie, D.A., Ishihama, A., and Hayward, R.S. (1993) The minus 35-recognition region of Escherichia coli sigma 70 is inessential for initiation of transcription at an 'extended minus 10' promoter. J Mol Biol 232: 406-418.
-
(1993)
J Mol Biol
, vol.232
, pp. 406-418
-
-
Kumar, A.1
Malloch, R.A.2
Fujita, N.3
Smillie, D.A.4
Ishihama, A.5
Hayward, R.S.6
-
46
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin, M.A., Blackshields, G., Brown, N.P., Chenna, R., McGettigan, P.A., McWilliam, H., etal. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
-
47
-
-
0028113847
-
Observation of binding and polymerization of Fur repressor onto operator-containing DNA with electron and atomic force microscopes
-
Le Cam, E., Frechon, D., Barray, M., Fourcade, A., and Delain, E. (1994) Observation of binding and polymerization of Fur repressor onto operator-containing DNA with electron and atomic force microscopes. Proc Natl Acad Sci USA 91: 11816-11820.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 11816-11820
-
-
Le Cam, E.1
Frechon, D.2
Barray, M.3
Fourcade, A.4
Delain, E.5
-
48
-
-
34248669001
-
Functional specialization within the Fur family of metalloregulators
-
Lee, J.W., and Helmann, J.D. (2007) Functional specialization within the Fur family of metalloregulators. Biometals 20: 485-499.
-
(2007)
Biometals
, vol.20
, pp. 485-499
-
-
Lee, J.W.1
Helmann, J.D.2
-
49
-
-
4544300772
-
Growth phase regulation of flaA expression in Helicobacter pylori is luxS dependent
-
Loh, J.T., Forsyth, M.H., and Cover, T.L. (2004) Growth phase regulation of flaA expression in Helicobacter pylori is luxS dependent. Infect Immun 72: 5506-5510.
-
(2004)
Infect Immun
, vol.72
, pp. 5506-5510
-
-
Loh, J.T.1
Forsyth, M.H.2
Cover, T.L.3
-
50
-
-
34250372426
-
Regulation of Helicobacter pylori cagA expression in response to salt
-
Loh, J.T., Torres, V.J., and Cover, T.L. (2007) Regulation of Helicobacter pylori cagA expression in response to salt. Cancer Res 67: 4709-4715.
-
(2007)
Cancer Res
, vol.67
, pp. 4709-4715
-
-
Loh, J.T.1
Torres, V.J.2
Cover, T.L.3
-
51
-
-
0023258960
-
Operator sequences of the aerobactin operon of plasmid ColV-K30 binding the ferric uptake regulation (fur) repressor
-
de Lorenzo, V., Wee, S., Herrero, M., and Neilands, J.B. (1987) Operator sequences of the aerobactin operon of plasmid ColV-K30 binding the ferric uptake regulation (fur) repressor. J Bacteriol 169: 2624-2630.
-
(1987)
J Bacteriol
, vol.169
, pp. 2624-2630
-
-
de Lorenzo, V.1
Wee, S.2
Herrero, M.3
Neilands, J.B.4
-
52
-
-
0035017794
-
gamma-Glutamyltransferase is a Helicobacter pylori virulence factor but is not essential for colonization
-
McGovern, K.J., Blanchard, T.G., Gutierrez, J.A., Czinn, S.J., Krakowka, S., and Youngman, P. (2001) gamma-Glutamyltransferase is a Helicobacter pylori virulence factor but is not essential for colonization. Infect Immun 69: 4168-4173.
-
(2001)
Infect Immun
, vol.69
, pp. 4168-4173
-
-
McGovern, K.J.1
Blanchard, T.G.2
Gutierrez, J.A.3
Czinn, S.J.4
Krakowka, S.5
Youngman, P.6
-
53
-
-
0242349626
-
Growth phase-dependent response of Helicobacter pylori to iron starvation
-
Merrell, D.S., Thompson, L.J., Kim, C.C., Mitchell, H., Tompkins, L.S., Lee, A., and Falkow, S. (2003) Growth phase-dependent response of Helicobacter pylori to iron starvation. Infect Immun 71: 6510-6525.
-
(2003)
Infect Immun
, vol.71
, pp. 6510-6525
-
-
Merrell, D.S.1
Thompson, L.J.2
Kim, C.C.3
Mitchell, H.4
Tompkins, L.S.5
Lee, A.6
Falkow, S.7
-
54
-
-
77954016214
-
Helicobacter pylori apo-Fur regulation appears unconserved across species
-
Miles, S., Carpenter, B.M., Gancz, H., and Merrell, D.S. (2010a) Helicobacter pylori apo-Fur regulation appears unconserved across species. J Microbiol 48: 378-386.
-
(2010)
J Microbiol
, vol.48
, pp. 378-386
-
-
Miles, S.1
Carpenter, B.M.2
Gancz, H.3
Merrell, D.S.4
-
55
-
-
77953918947
-
Detailed in vivo analysis of the role of Helicobacter pylori Fur in colonization and disease
-
Miles, S., Piazuelo, M.B., Semino-Mora, C., Washington, M.K., Dubois, A., Peek, R.M., Jr, etal. (2010b) Detailed in vivo analysis of the role of Helicobacter pylori Fur in colonization and disease. Infect Immun 78: 3073-3082.
-
(2010)
Infect Immun
, vol.78
, pp. 3073-3082
-
-
Miles, S.1
Piazuelo, M.B.2
Semino-Mora, C.3
Washington, M.K.4
Dubois, A.5
Peek Jr., R.M.6
-
56
-
-
0037423768
-
RpoD promoters in Campylobacter jejuni exhibit a strong periodic signal instead of a -35 box
-
Petersen, L., Larsen, T.S., Ussery, D.W., On, S.L., and Krogh, A. (2003) RpoD promoters in Campylobacter jejuni exhibit a strong periodic signal instead of a -35 box. J Mol Biol 326: 1361-1372.
-
(2003)
J Mol Biol
, vol.326
, pp. 1361-1372
-
-
Petersen, L.1
Larsen, T.S.2
Ussery, D.W.3
On, S.L.4
Krogh, A.5
-
57
-
-
25444522923
-
Acid-induced activation of the urease promoters is mediated directly by the ArsRS two-component system of Helicobacter pylori
-
Pflock, M., Kennard, S., Delany, I., Scarlato, V., and Beier, D. (2005) Acid-induced activation of the urease promoters is mediated directly by the ArsRS two-component system of Helicobacter pylori. Infect Immun 73: 6437-6445.
-
(2005)
Infect Immun
, vol.73
, pp. 6437-6445
-
-
Pflock, M.1
Kennard, S.2
Delany, I.3
Scarlato, V.4
Beier, D.5
-
58
-
-
33646581347
-
Characterization of the ArsRS regulon of Helicobacter pylori, involved in acid adaptation
-
Pflock, M., Finsterer, N., Joseph, B., Mollenkopf, H., Meyer, T.F., and Beier, D. (2006a) Characterization of the ArsRS regulon of Helicobacter pylori, involved in acid adaptation. J Bacteriol 188: 3449-3462.
-
(2006)
J Bacteriol
, vol.188
, pp. 3449-3462
-
-
Pflock, M.1
Finsterer, N.2
Joseph, B.3
Mollenkopf, H.4
Meyer, T.F.5
Beier, D.6
-
59
-
-
33748752035
-
Acid-responsive gene regulation in the human pathogen Helicobacter pylori
-
Pflock, M., Kennard, S., Finsterer, N., and Beier, D. (2006b) Acid-responsive gene regulation in the human pathogen Helicobacter pylori. J Biotechnol 126: 52-60.
-
(2006)
J Biotechnol
, vol.126
, pp. 52-60
-
-
Pflock, M.1
Kennard, S.2
Finsterer, N.3
Beier, D.4
-
60
-
-
0344321893
-
Architecture of a protein central to iron homeostasis: crystal structure and spectroscopic analysis of the ferric uptake regulator
-
Pohl, E., Haller, J.C., Mijovilovich, A., Meyer-Klaucke, W., Garman, E., and Vasil, M.L. (2003) Architecture of a protein central to iron homeostasis: crystal structure and spectroscopic analysis of the ferric uptake regulator. Mol Microbiol 47: 903-915.
-
(2003)
Mol Microbiol
, vol.47
, pp. 903-915
-
-
Pohl, E.1
Haller, J.C.2
Mijovilovich, A.3
Meyer-Klaucke, W.4
Garman, E.5
Vasil, M.L.6
-
61
-
-
0035140053
-
Allelic variation within Helicobacter pylori babA and babB
-
Pride, D.T., Meinersmann, R.J., and Blaser, M.J. (2001) Allelic variation within Helicobacter pylori babA and babB. Infect Immun 69: 1160-1171.
-
(2001)
Infect Immun
, vol.69
, pp. 1160-1171
-
-
Pride, D.T.1
Meinersmann, R.J.2
Blaser, M.J.3
-
62
-
-
0027761839
-
A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase
-
Ross, W., Gosink, K.K., Salomon, J., Igarashi, K., Zou, C., Ishihama, A., etal. (1993) A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase. Science 262: 1407-1413.
-
(1993)
Science
, vol.262
, pp. 1407-1413
-
-
Ross, W.1
Gosink, K.K.2
Salomon, J.3
Igarashi, K.4
Zou, C.5
Ishihama, A.6
-
63
-
-
0031691355
-
Escherichia coli promoters with UP elements of different strengths: modular structure of bacterial promoters
-
Ross, W., Aiyar, S.E., Salomon, J., and Gourse, R.L. (1998) Escherichia coli promoters with UP elements of different strengths: modular structure of bacterial promoters. J Bacteriol 180: 5375-5383.
-
(1998)
J Bacteriol
, vol.180
, pp. 5375-5383
-
-
Ross, W.1
Aiyar, S.E.2
Salomon, J.3
Gourse, R.L.4
-
64
-
-
0028979280
-
An extended -10 promoter alone directs transcription of the DpnII operon of Streptococcus pneumoniae
-
Sabelnikov, A.G., Greenberg, B., and Lacks, S.A. (1995) An extended -10 promoter alone directs transcription of the DpnII operon of Streptococcus pneumoniae. J Mol Biol 250: 144-155.
-
(1995)
J Mol Biol
, vol.250
, pp. 144-155
-
-
Sabelnikov, A.G.1
Greenberg, B.2
Lacks, S.A.3
-
66
-
-
34249820257
-
Roles of His-rich hpn and hpn-like proteins in Helicobacter pylori nickel physiology
-
Seshadri, S., Benoit, S.L., and Maier, R.J. (2007) Roles of His-rich hpn and hpn-like proteins in Helicobacter pylori nickel physiology. J Bacteriol 189: 4120-4126.
-
(2007)
J Bacteriol
, vol.189
, pp. 4120-4126
-
-
Seshadri, S.1
Benoit, S.L.2
Maier, R.J.3
-
67
-
-
77949425194
-
The primary transcriptome of the major human pathogen Helicobacter pylori
-
Sharma, C.M., Hoffmann, S., Darfeuille, F., Reignier, J., Findeiss, S., Sittka, A., etal. (2010) The primary transcriptome of the major human pathogen Helicobacter pylori. Nature 464: 250-255.
-
(2010)
Nature
, vol.464
, pp. 250-255
-
-
Sharma, C.M.1
Hoffmann, S.2
Darfeuille, F.3
Reignier, J.4
Findeiss, S.5
Sittka, A.6
-
68
-
-
33847390753
-
Anatomy of Escherichia coli sigma70 promoters
-
Shultzaberger, R.K., Chen, Z., Lewis, K.A., and Schneider, T.D. (2007) Anatomy of Escherichia coli sigma70 promoters. Nucleic Acids Res 35: 771-788.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 771-788
-
-
Shultzaberger, R.K.1
Chen, Z.2
Lewis, K.A.3
Schneider, T.D.4
-
69
-
-
0030728522
-
Transcriptional analysis of the divergent cagAB genes encoded by the pathogenicity island of Helicobacter pylori
-
Spohn, G., Beier, D., Rappuoli, R., and Scarlato, V. (1997) Transcriptional analysis of the divergent cagAB genes encoded by the pathogenicity island of Helicobacter pylori. Mol Microbiol 26: 361-372.
-
(1997)
Mol Microbiol
, vol.26
, pp. 361-372
-
-
Spohn, G.1
Beier, D.2
Rappuoli, R.3
Scarlato, V.4
-
70
-
-
0032774326
-
Regulation of the transcription of genes encoding different virulence factors in Helicobacter pylori by free iron
-
Szczebara, F., Dhaenens, L., Armand, S., and Husson, M.O. (1999) Regulation of the transcription of genes encoding different virulence factors in Helicobacter pylori by free iron. FEMS Microbiol Lett 175: 165-170.
-
(1999)
FEMS Microbiol Lett
, vol.175
, pp. 165-170
-
-
Szczebara, F.1
Dhaenens, L.2
Armand, S.3
Husson, M.O.4
-
71
-
-
79958056347
-
Helicobacter pylori perturbs iron trafficking in the epithelium to grow on the cell surface
-
Tan, S., Noto, J.M., Romero-Gallo, J., Peek, R.M., Jr, and Amieva, M.R. (2011) Helicobacter pylori perturbs iron trafficking in the epithelium to grow on the cell surface. PLoS Pathog 7: e1002050.
-
(2011)
PLoS Pathog
, vol.7
-
-
Tan, S.1
Noto, J.M.2
Romero-Gallo, J.3
Peek Jr., R.M.4
Amieva, M.R.5
-
72
-
-
0242417000
-
Gene expression profiling of Helicobacter pylori reveals a growth-phase-dependent switch in virulence gene expression
-
Thompson, L.J., Merrell, D.S., Neilan, B.A., Mitchell, H., Lee, A., and Falkow, S. (2003) Gene expression profiling of Helicobacter pylori reveals a growth-phase-dependent switch in virulence gene expression. Infect Immun 71: 2643-2655.
-
(2003)
Infect Immun
, vol.71
, pp. 2643-2655
-
-
Thompson, L.J.1
Merrell, D.S.2
Neilan, B.A.3
Mitchell, H.4
Lee, A.5
Falkow, S.6
-
73
-
-
0030835739
-
The complete genome sequence of the gastric pathogen Helicobacter pylori
-
Tomb, J.F., White, O., Kerlavage, A.R., Clayton, R.A., Sutton, G.G., Fleischmann, R.D., etal. (1997) The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature 388: 539-547.
-
(1997)
Nature
, vol.388
, pp. 539-547
-
-
Tomb, J.F.1
White, O.2
Kerlavage, A.R.3
Clayton, R.A.4
Sutton, G.G.5
Fleischmann, R.D.6
-
74
-
-
77950219265
-
Staphylococcus aureus fur regulates the expression of virulence factors that contribute to the pathogenesis of pneumonia
-
Torres, V.J., Attia, A.S., Mason, W.J., Hood, M.I., Corbin, B.D., Beasley, F.C., etal. (2010) Staphylococcus aureus fur regulates the expression of virulence factors that contribute to the pathogenesis of pneumonia. Infect Immun 78: 1618-1628.
-
(2010)
Infect Immun
, vol.78
, pp. 1618-1628
-
-
Torres, V.J.1
Attia, A.S.2
Mason, W.J.3
Hood, M.I.4
Corbin, B.D.5
Beasley, F.C.6
-
75
-
-
0036058679
-
The role of the ferric uptake regulator (Fur) in regulation of Helicobacter pylori iron uptake
-
van Vliet, A.H., Stoof, J., Vlasblom, R., Wainwright, S.A., Hughes, N.J., Kelly, D.J., etal. (2002) The role of the ferric uptake regulator (Fur) in regulation of Helicobacter pylori iron uptake. Helicobacter 7: 237-244.
-
(2002)
Helicobacter
, vol.7
, pp. 237-244
-
-
van Vliet, A.H.1
Stoof, J.2
Vlasblom, R.3
Wainwright, S.A.4
Hughes, N.J.5
Kelly, D.J.6
-
76
-
-
0037646546
-
Differential regulation of amidase- and formamidase-mediated ammonia production by the Helicobacter pylori fur repressor
-
van Vliet, A.H., Stoof, J., Poppelaars, S.W., Bereswill, S., Homuth, G., Kist, M., etal. (2003) Differential regulation of amidase- and formamidase-mediated ammonia production by the Helicobacter pylori fur repressor. J Biol Chem 278: 9052-9057.
-
(2003)
J Biol Chem
, vol.278
, pp. 9052-9057
-
-
van Vliet, A.H.1
Stoof, J.2
Poppelaars, S.W.3
Bereswill, S.4
Homuth, G.5
Kist, M.6
-
77
-
-
5644252852
-
NikR-mediated regulation of Helicobacter pylori acid adaptation
-
van Vliet, A.H., Ernst, F.D., and Kusters, J.G. (2004) NikR-mediated regulation of Helicobacter pylori acid adaptation. Trends Microbiol 12: 489-494.
-
(2004)
Trends Microbiol
, vol.12
, pp. 489-494
-
-
van Vliet, A.H.1
Ernst, F.D.2
Kusters, J.G.3
-
78
-
-
0002708171
-
Gene regulation
-
Mobley, H.L.T., Mendtz, G.L., and Hazell, S.L. (eds). Washington, DC: ASM press
-
de Vries, N., van Vliet, A.H.M., and Kusters, J.G. (2001) Gene regulation. In Helicobacter pylori: Physiology and Genetics. Mobley, H.L.T., Mendtz, G.L., and Hazell, S.L. (eds). Washington, DC: ASM press, pp. 321-334.
-
(2001)
Helicobacter pylori: Physiology and Genetics
, pp. 321-334
-
-
de Vries, N.1
van Vliet, A.H.M.2
Kusters, J.G.3
-
79
-
-
0036084419
-
Essential role of ferritin Pfr in Helicobacter pylori iron metabolism and gastric colonization
-
Waidner, B., Greiner, S., Odenbreit, S., Kavermann, H., Velayudhan, J., Stahler, F., etal. (2002) Essential role of ferritin Pfr in Helicobacter pylori iron metabolism and gastric colonization. Infect Immun 70: 3923-3929.
-
(2002)
Infect Immun
, vol.70
, pp. 3923-3929
-
-
Waidner, B.1
Greiner, S.2
Odenbreit, S.3
Kavermann, H.4
Velayudhan, J.5
Stahler, F.6
-
80
-
-
0028109255
-
Iron-responsive genetic regulation in Campylobacter jejuni: cloning and characterization of a fur homolog
-
Wooldridge, K.G., Williams, P.H., and Ketley, J.M. (1994) Iron-responsive genetic regulation in Campylobacter jejuni: cloning and characterization of a fur homolog. J Bacteriol 176: 5852-5856.
-
(1994)
J Bacteriol
, vol.176
, pp. 5852-5856
-
-
Wooldridge, K.G.1
Williams, P.H.2
Ketley, J.M.3
-
81
-
-
0031916447
-
Helicobacter pylori ribBA-mediated riboflavin production is involved in iron acquisition
-
Worst, D.J., Gerrits, M.M., Vandenbroucke-Grauls, C.M., and Kusters, J.G. (1998) Helicobacter pylori ribBA-mediated riboflavin production is involved in iron acquisition. J Bacteriol 180: 1473-1479.
-
(1998)
J Bacteriol
, vol.180
, pp. 1473-1479
-
-
Worst, D.J.1
Gerrits, M.M.2
Vandenbroucke-Grauls, C.M.3
Kusters, J.G.4
-
82
-
-
52649152402
-
Histoplasma capsulatum secreted gamma-glutamyltransferase reduces iron by generating an efficient ferric reductant
-
Zarnowski, R., Cooper, K.G., Brunold, L.S., Calaycay, J., and Woods, J.P. (2008) Histoplasma capsulatum secreted gamma-glutamyltransferase reduces iron by generating an efficient ferric reductant. Mol Microbiol 70: 352-368.
-
(2008)
Mol Microbiol
, vol.70
, pp. 352-368
-
-
Zarnowski, R.1
Cooper, K.G.2
Brunold, L.S.3
Calaycay, J.4
Woods, J.P.5
-
83
-
-
33645461831
-
Global analysis of iron assimilation and fur regulation in Yersinia pestis
-
Zhou, D., Qin, L., Han, Y., Qiu, J., Chen, Z., Li, B., etal. (2006) Global analysis of iron assimilation and fur regulation in Yersinia pestis. FEMS Microbiol Lett 258: 9-17.
-
(2006)
FEMS Microbiol Lett
, vol.258
, pp. 9-17
-
-
Zhou, D.1
Qin, L.2
Han, Y.3
Qiu, J.4
Chen, Z.5
Li, B.6
|