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Volumn 870, Issue , 2012, Pages 99-114

DNA sequencing by nanopore-induced photon emission

Author keywords

Circular DNA Conversion; DNA sequencing; Nanopore array; Solid state nanopore

Indexed keywords

CIRCULAR DNA; FLUORESCENT DYE; SILICON DERIVATIVE; SILICON NITRIDE;

EID: 84860513892     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-61779-773-6_6     Document Type: Article
Times cited : (2)

References (39)
  • 1
    • 58149234737 scopus 로고    scopus 로고
    • Real-time DNA sequencing from single polymerase molecules
    • Eid J, Fehr A, Gray J et al (2009) Real-time DNA sequencing from single polymerase molecules. Science 5910:133-138
    • (2009) Science , vol.5910 , pp. 133-138
    • Eid, J.1    Fehr, A.2    Gray, J.3
  • 5
    • 72849121316 scopus 로고    scopus 로고
    • DNA profi ling using solid-state nanopores: Detection of DNA-binding molecules
    • Wanunu M, Sutin J, Meller A (2009) DNA profi ling using solid-state nanopores: detection of DNA-binding molecules. Nano Lett 10: 3498-3502
    • (2009) Nano Lett , vol.10 , pp. 3498-3502
    • Wanunu, M.1    Sutin, J.2    Meller, A.3
  • 6
    • 0036797062 scopus 로고    scopus 로고
    • Characterization of nucleic acids by nanopore analysis
    • Deamer DW, Branton D (2002) Characterization of nucleic acids by nanopore analysis. Acc Chem Res 10:817-825
    • (2002) Acc Chem Res , vol.10 , pp. 817-825
    • Deamer, D.W.1    Branton, D.2
  • 7
    • 34248351114 scopus 로고    scopus 로고
    • Solid-state nanopores
    • DOI 10.1038/nnano.2007.27, PII NNANO200727
    • Dekker C (2007) Solid-state nanopores. Nat Nanotechnol 4:209-215 (Pubitemid 46739810)
    • (2007) Nature Nanotechnology , vol.2 , Issue.4 , pp. 209-215
    • Dekker, C.1
  • 8
    • 34548505259 scopus 로고    scopus 로고
    • Nanopore-based single-molecule DNA analysis
    • DOI 10.2217/17435889.2.4.459
    • Healy K (2007) Nanopore-based single-molecule DNA analysis. Nanomedicine 4:459-481 (Pubitemid 47370816)
    • (2007) Nanomedicine , vol.2 , Issue.4 , pp. 459-481
    • Healy, K.1
  • 10
    • 74849103516 scopus 로고    scopus 로고
    • Translocation of single-stranded DNA Through single-walled carbon nanotubes
    • Liu H, He J, Tang J et al (2010) Translocation of single-stranded DNA Through single-walled carbon nanotubes. Science 5961:64-67
    • (2010) Science , vol.5961 , pp. 64-67
    • Liu, H.1    He, J.2    Tang, J.3
  • 11
    • 76749157245 scopus 로고    scopus 로고
    • Nanopore based sequence specifi c detection of duplex DNA for genomic profi ling
    • Singer A, Wanunu M, Morrison W et al (2010) Nanopore based sequence specifi c detection of duplex DNA for genomic profi ling. Nano Lett 2:738-742
    • (2010) Nano Lett , vol.2 , pp. 738-742
    • Singer, A.1    Wanunu, M.2    Morrison, W.3
  • 12
    • 76649116514 scopus 로고    scopus 로고
    • Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient
    • Wanunu M, Morrison W, Rabin Y et al (2010) Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient. Nat Nanotechnol 2:160-165
    • (2010) Nat Nanotechnol , vol.2 , pp. 160-165
    • Wanunu, M.1    Morrison, W.2    Rabin, Y.3
  • 13
    • 58149299894 scopus 로고    scopus 로고
    • DNA translocation governed by interactions with solid-state nanopores
    • Wanunu M, Sutin J, McNally B et al (2008) DNA translocation governed by interactions with solid-state nanopores. Biophys J 10: 4716-4725
    • (2008) Biophys J , vol.10 , pp. 4716-4725
    • Wanunu, M.1    Sutin, J.2    McNally, B.3
  • 15
    • 77954979128 scopus 로고    scopus 로고
    • DNA translocation through an array of kinked nanopores
    • Chen Z, Jiang YB, Dunphy DR et al (2010) DNA translocation through an array of kinked nanopores. Nat Mater 8:667-675
    • (2010) Nat Mater , vol.8 , pp. 667-675
    • Chen, Z.1    Jiang, Y.B.2    Dunphy, D.R.3
  • 17
    • 78149463965 scopus 로고    scopus 로고
    • Chemically modifi ed solid state nanopores for high throughput nanoparticle separation
    • Prabhu AS, Jubery TZN, Freedman KJ et al (2010) Chemically modifi ed solid state nanopores for high throughput nanoparticle separation. J Phys Condens Matter 22(45):454107
    • (2010) J Phys Condens Matter , vol.22 , Issue.45 , pp. 454107
    • Prabhu, A.S.1    Tzn, J.2    Freedman, K.J.3
  • 18
    • 0032762996 scopus 로고    scopus 로고
    • Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules
    • Akeson M, Branton D, Kasianowicz JJ et al (1999) Microsecond time-scale discrimination among polycytidylic acid, polyadenylic acid, and polyuridylic acid as homopolymers or as segments within single RNA molecules. Biophys J 6:3227-3233
    • (1999) Biophys J , vol.6 , pp. 3227-3233
    • Akeson, M.1    Branton, D.2    Kasianowicz, J.J.3
  • 20
    • 0037855911 scopus 로고    scopus 로고
    • Dynamics of polynucleotide transport through nanometre-scale pores
    • Meller A (2003) Dynamics of polynucleotide transport through nanometre-scale pores. J Phys Condens Matter 17:R581-R607
    • (2003) J Phys Condens Matter , vol.17
    • Meller, A.1
  • 21
    • 0035831563 scopus 로고    scopus 로고
    • Voltage-driven DNA translocations through a nanopore
    • DOI 10.1103/PhysRevLett.86.3435
    • Meller A, Nivon L, Branton D (2001) Voltagedriven DNA translocations through a nanopore. Phys Rev Lett 15:3435-3438 (Pubitemid 32380654)
    • (2001) Physical Review Letters , vol.86 , Issue.15 , pp. 3435-3438
    • Meller, A.1    Nivon, L.2    Branton, D.3
  • 22
    • 53649108801 scopus 로고    scopus 로고
    • The potential and challenges of nanopore sequencing
    • Branton D, Deamer DW, Marziali A et al (2008) The potential and challenges of nanopore sequencing. Nat Biotechnol 10:1146-1153
    • (2008) Nat Biotechnol , vol.10 , pp. 1146-1153
    • Branton, D.1    Deamer, D.W.2    Marziali, A.3
  • 23
    • 64449088698 scopus 로고    scopus 로고
    • Continuous base identifi cation for single-molecule nanopore DNA sequencing
    • Clarke J, Wu HC, Jayasinghe L et al (2009) Continuous base identifi cation for single-molecule nanopore DNA sequencing. Nat Nanotechnol 4:265-270
    • (2009) Nat Nanotechnol , vol.4 , pp. 265-270
    • Clarke, J.1    Wu, H.C.2    Jayasinghe, L.3
  • 25
    • 0036897960 scopus 로고    scopus 로고
    • Biosensors for DNA sequence detection
    • DOI 10.1016/S1367-5931(02)00395-2
    • Vercoutere W, Akeson M (2002) Biosensors for DNA sequence detection. Curr Opin Chem Biol 6:816-822 (Pubitemid 35449342)
    • (2002) Current Opinion in Chemical Biology , vol.6 , Issue.6 , pp. 816-822
    • Vercoutere, W.1    Akeson, M.2
  • 26
    • 75749119008 scopus 로고    scopus 로고
    • Synchronous optical and electrical detection of biomolecules traversing through solidstate nanopores
    • Soni GV, Singer A, Yu Z et al (2010) Synchronous optical and electrical detection of biomolecules traversing through solidstate nanopores. Rev Sci Instrum 1: 014301-014307
    • (2010) Rev Sci Instrum , vol.1 , pp. 014301-014307
    • Soni, G.V.1    Singer, A.2    Yu, Z.3
  • 27
    • 77953303738 scopus 로고    scopus 로고
    • Optical recognition of converted DNA nucleotides for single-molecule DNA sequencing using nanopore arrays
    • McNally B, Singer A, Yu Z et al (2010) Optical recognition of converted DNA nucleotides for single-molecule DNA sequencing using nanopore arrays. Nano Lett 6:2237-2244
    • (2010) Nano Lett , vol.6 , pp. 2237-2244
    • McNally, B.1    Singer, A.2    Yu, Z.3
  • 28
    • 33746610665 scopus 로고    scopus 로고
    • Fabrication of symmetric sub-5 nm nanopores using focused ion and electron beams
    • DOI 10.1088/0957-4484/17/13/031, PII S0957448406175583, 031
    • Lo CJ, Aref T, Bezryadin A (2006) Fabrication of symmetric sub-5 nm nanopores using focused ion and electron beams. Nanotechnology 13: 3264-3267 (Pubitemid 44149659)
    • (2006) Nanotechnology , vol.17 , Issue.13 , pp. 3264-3267
    • Lo, C.J.1    Aref, T.2    Bezryadin, A.3
  • 29
    • 32644458567 scopus 로고    scopus 로고
    • Nanoscale volcanoes: Accretion of matter at ion-sculpted nanopores
    • Mitsui T, Stein D, Kim YR et al (2006) Nanoscale volcanoes: accretion of matter at ion-sculpted nanopores. Phys Rev Lett 96(3):036102
    • (2006) Phys Rev Lett , vol.96 , Issue.3 , pp. 036102
    • Mitsui, T.1    Stein, D.2    Kim, Y.R.3
  • 30
    • 76949084900 scopus 로고    scopus 로고
    • Direct FIB fabrication and integration of single nanopore devices for the manipulation of macromolecules
    • Schiedt B, Auvray L, Bacri L et al (2010) Direct FIB fabrication and integration of "single nanopore devices" for the manipulation of macromolecules. Microelectron Eng 5-8:1300-1303
    • (2010) Microelectron Eng , vol.5-8 , pp. 1300-1303
    • Schiedt, B.1    Auvray, L.2    Bacri, L.3
  • 31
    • 33846161238 scopus 로고    scopus 로고
    • Rapid fabrication of uniformly sized nanopores and nanopore arrays for parallel DNA analysis
    • DOI 10.1002/adma.200601191
    • Kim MJ, Wanunu M, Bell DC et al (2006) Rapid fabrication of uniformly sized nanopores and nanopore arrays for parallel DNA analysis. Adv Mater 18(23):3149-3153 (Pubitemid 46080209)
    • (2006) Advanced Materials , vol.18 , Issue.23 , pp. 3149-3153
    • Kim, M.J.1    Wanunu, M.2    Bell, D.C.3    Meller, A.4
  • 32
    • 0042285088 scopus 로고    scopus 로고
    • Fabrication of solid-state nanopores with singlenanometre precision
    • Storm AJ, Chen JH, Ling XS et al (2003) Fabrication of solid-state nanopores with singlenanometre precision. Nat Mater 8:537-540
    • (2003) Nat Mater , vol.8 , pp. 537-540
    • Storm, A.J.1    Chen, J.H.2    Ling, X.S.3
  • 33
    • 34247494251 scopus 로고    scopus 로고
    • Characteristics of solid-state nanometre pores fabricated using a transmission electron microscope
    • Kim MJ, McNally B, Murata K et al (2007) Characteristics of solid-state nanometre pores fabricated using a transmission electron microscope. Nanotechnology 18(20):205302
    • (2007) Nanotechnology , vol.18 , Issue.20 , pp. 205302
    • Kim, M.J.1    McNally, B.2    Murata, K.3
  • 34
    • 4143057920 scopus 로고    scopus 로고
    • Atomic layer deposition to fine-tune the surface properties and diameters of fabricated nanopores
    • DOI 10.1021/nl0494001
    • Chen P, Mitsui T, Farmer DB et al (2004) Atomic layer deposition to fi ne-tune the surface properties and diameters of fabricated nanopores. Nano Lett 7:1333-1337 (Pubitemid 39092181)
    • (2004) Nano Letters , vol.4 , Issue.7 , pp. 1333-1337
    • Chen, P.1    Mitsui, T.2    Farmer, D.B.3    Golovchenko, J.4    Gordon, R.G.5    Branton, D.6
  • 35
    • 0037657438 scopus 로고    scopus 로고
    • Physical characterization of thin ALD-Al2O3 fi lms
    • Jakschik S, Schroeder U, Hecht T et al (2003) Physical characterization of thin ALD-Al2O3 fi lms. Appl Surf Sci 1-4:352-359
    • (2003) Appl Surf Sci , vol.1-4 , pp. 352-359
    • Jakschik, S.1    Schroeder, U.2    Hecht, T.3
  • 36
    • 67651119823 scopus 로고    scopus 로고
    • Highly sensitive, mechanically stable nanopore sensors for DNA analysis
    • Venkatesan BM, Dorvel B, Yemenicioglu S et al (2009) Highly sensitive, mechanically stable nanopore sensors for DNA analysis. Adv Mater 21(27):2771
    • (2009) Adv Mater , vol.21 , Issue.27 , pp. 2771
    • Venkatesan, B.M.1    Dorvel, B.2    Yemenicioglu, S.3
  • 38
    • 0019494948 scopus 로고
    • Cell-substrate contacts illuminated by total internal reflection fluorescence
    • DOI 10.1083/jcb.89.1.141
    • Axelrod D (1981) Cell-substrate contacts illuminated by total internal-refl ection fl uorescence. J Cell Biol 1:141-145 (Pubitemid 11066139)
    • (1981) Journal of Cell Biology , vol.89 , Issue.1 , pp. 141-145
    • Axelrod, D.1
  • 39
    • 53649084900 scopus 로고    scopus 로고
    • Single molecule analysis of nucleic acids and DNA-protein interactions using nanopores
    • Selvin P, Ha T (eds Cold Spring Harbor New York
    • Wanunu M, Meller A (2008) Single molecule analysis of nucleic acids and DNA-protein interactions using nanopores. In: Selvin P, Ha T (eds) Laboratory manual on single molecules. Cold Spring Harbor, New York
    • (2008) Laboratory Manual on Single Molecules
    • Wanunu, M.1    Meller, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.