Radicals in flavoproteins

Topics in Current Chemistry

Volumn 321, Issue , 2012, Pages 41-66

  Schleicher, Erik ^a   Weber, Stefan ^a  

^a UNIVERSITY OF FREIBURG   (Germany)

Author keywords

BLUF domains; Cryptochrome; ENDOR; EPR; ESR; Flavoprotein; Photolyase; Phototropin; TREPR

Indexed keywords

FLAVOPROTEIN; FREE RADICAL;

ARTICLE; CATALYSIS; CHEMISTRY; DNA REPAIR; ELECTRON SPIN RESONANCE;

CATALYSIS; DNA REPAIR; ELECTRON SPIN RESONANCE SPECTROSCOPY; FLAVOPROTEINS; FREE RADICALS;

EID: 84859785687     PISSN: 03401022     EISSN: None     Source Type: Book Series    
DOI: 10.1007/128_2011_301     Document Type: Article

References (125)

1. Frey PA, Hegeman AD, Reed GH (2006) Chem Rev 106:3302
2. Stubbe J, Nocera DG, Yee CS, Chang MCY (2003) Chem Rev 103:2167
3. Stubbe J, van der Donk WA (1998) Chem Rev 98:705
4. Frey PA (2001) Annu Rev Biochem 70:121
5. Himo F, Siegbahn PEM (2003) Chem Rev 103:2421
6. Fetzner S, Steiner RA (2010) Appl Microbiol Biotechnol 86:791
7. Massey V (2000) Biochem Soc Trans 28:283
8. Fraaije MW, Mattevi A (2000) Trends Biochem Sci 25:126
9. Joosten V, van Berkel WJH (2007) Curr Opin Chem Biol 11:195
10. Massey V, Palmer G (1966) Biochemistry 5:3181
11. Massey V (1994) J Biol Chem 269:22459
12. Losi A (2007) Photochem Photobiol 83:1283
13. Lin C, Todo T (2005) Genome Biol 6:220
14. Demarsy E, Fankhauser C (2009) Curr Opin Plant Biol 12:69
15. Liu B, Liu H, Zhong D, Lin C (2010) Curr Opin Plant Biol 13:578
16. Losi A, Gärtner W (2011) Photochem Photobiol 87:491
17. Rodgers CT, Hore PJ (2009) Proc Natl Acad Sci USA 106:353
18. Ritz T, Ahmad M, Mouritsen H, Wiltschko R, Wiltschko W (2010) J R Soc Interface 7:S135
19. Weber S (2005) Biochim Biophys Acta 1707:1
20. Sancar A (2003) Chem Rev 103:2203
21. Müller M, Carell T (2009) Curr Opin Struct Biol 19:277
22. Edmondson DE (1985) Biochem Soc Trans 13:593
23. Kay CWM, Weber S (2002) In: Gilbert BC, Davies MJ, Murphy DM (eds) Electron paramagnetic resonance (specialist periodical reports), vol 18. Royal Society of Chemistry, Cambridge, p 222
24. Schleicher E, Wenzel R, Okafuji A, Ahmad M, Batschauer A, Essen L-O, Hitomi K, Getzoff ED, Bittl R, Weber S (2010) Appl Magn Reson 37:339
25. Weber S, Kay CWM, Bacher A, Richter G, Bittl R (2005) Chemphyschem 6:292
26. Garća JI, Medina M, Sancho J, Alonso PJ, Gómez-Moreno C, Mayoral JA, Mart́nez JI (2002) J Phys Chem A 106:4729
27. Acocella A, Jones GA, Zerbetto F (2010) J Phys Chem B 114:4101
28. Fuchs M, Schleicher E, Schnegg A, Kay CWM, Törring JT, Bittl R, Bacher A, Richter G, Möbius K, Weber S (2002) J Phys Chem B 106:8885
29. Barquera B, Morgan JE, Lukoyanov D, Scholes CP, Gennis RB, Nilges MJ (2003) J Am Chem Soc 125:265
30. Kay CWM, Bittl R, Bacher A, Richter G, Weber S (2005) J Am Chem Soc 127:10780
31. Schnegg A, Kay CWM, Schleicher E, Hitomi K, Todo T, Möbius K, Weber S (2006) Mol Phys 104:1627
32. Schnegg A, Okafuji A, Bacher A, Bittl R, Fischer M, Fuchs MR, Hegemann P, Joshi M, Kay CWM, Richter G, Schleicher E, Weber S (2006) Appl Magn Reson 30:345
33. Okafuji A, Schnegg A, Schleicher E, Möbius K, Weber S (2008) J Phys Chem B 112:3568
34. Kay CWM, El Mkami H, Molla G, Pollegioni L, Ramsay RR (2007) J Am Chem Soc 129:16091
35. Pauwels E, Declerck R, Verstraelen T, De Sterck B, Kay CWM, Van Speybroeck V, Waroquier M (2010) J Phys Chem B 114:16655
36. Möbius K (2000) Chem Soc Rev 29:129
37. Steinhoff H-J, Savitsky A, Wegener C, Pfeiffer M, Plato M, Möbius K (2000) Biochim Biophys Acta 1457:253
38. Kay CWM, Schleicher E, Hitomi K, Todo T, Bittl R, Weber S (2005) Magn Reson Chem 43: S96
39. Gullá AF, Budil DE (2001) J Phys Chem B 105:8056
40. Sinnecker S, Reijerse E, Neese F, Lubitz W (2004) J Am Chem Soc 126:3280
41. Teutloff C, Hofbauer W, Zech SG, Stein M, Bittl R, Lubitz W (2001) Appl Magn Reson 21:363
42. Murphy DM, Farley RD (2006) Chem Soc Rev 35:249
43. Van Doorslaer S, Vinck E (2007) Phys Chem Chem Phys 9:4620
44. Kulik L, Lubitz W (2009) Photosynth Res 102:391
45. Kay CWM, Feicht R, Schulz K, Sadewater P, Sancar A, Bacher A, Möbius K, Richter G, Weber S (1999) Biochemistry 38:16740
46. Medina M, Cammack R (2007) Appl Magn Reson 31:457
47. Bittl R, Kay CWM, Weber S, Hegemann P (2003) Biochemistry 42:8506
48. Barquera B, Ramirez-Silva L, Morgan JE, Nilges MJ (2006) J Biol Chem 281:36482
49. Nagai H, Fukushima Y, Okajima K, Ikeuchi M, Mino H (2008) Biochemistry 47:12574
50. Banerjee R, Schleicher E, Meier S, Muñoz Viana R, Pokorny R, Ahmad M, Bittl R, Batschauer A (2007) J Biol Chem 282:14916
51. Hoang N, Schleicher E, Kacprzak S, Bouly JP, Picot M, Wu W, Berndt A, Wolf E, Bittl R, Ahmad M (2008) PLoS Biol 6:e160.1559
52. Brosi R, Illarionov B, Mathes T, Fischer M, Joshi M, Bacher A, Hegemann P, Bittl R, Weber S, Schleicher E (2010) J Am Chem Soc 132:8935
53. Hamdane D, Guérineau V, Un S, Golinelli-Pimpaneau B (2011) Biochemistry 50:5208
54. Goldfarb D, Arieli D (2004) Annu Rev Biophys Biomol Struct 33:441
55. Goldfarb D (2006) Phys Chem Chem Phys 8:2325
56. Schleicher E, Hitomi K, Kay CWM, Getzoff ED, Todo T, Weber S (2007) J Biol Chem 282:4738
57. Kurreck H, Bock M, Bretz N, Elsner M, Kraus H, Lubitz W, Müller F, Geissler J, Kroneck PMH (1984) J Am Chem Soc 106:737
58. Ç inkaya I, Buckel W, Medina M, Gómez-Moreno C, Cammack R (1997) Biol Chem 378:843
59. Medina M, Lostao A, Sancho J, Gómez-Moreno C, Cammack R, Alonso PJ, Mart́nez JI (1999) Biophys J 77:1712
60. Weber S, Richter G, Schleicher E, Bacher A, Möbius K, Kay CWM (2001) Biophys J 81:1195
61. Mart́nez JI, Alonso PJ, Gómez-Moreno C, Medina M (1997) Biochemistry 36:15526
62. Medina M, Vrielink A, Cammack R (1997) FEBS Lett 400:247
63. Jordan SP, Jorns MS (1988) Biochemistry 27:8915
64. Kim S-T, Malhotra K, Smith CA, Taylor J-S, Sancar A (1994) J Biol Chem 269:8535
65. Zhao X, Liu J, Hsu DS, Zhao S, Taylor J-S, Sancar A (1997) J Biol Chem 272:32580
66. Hitomi K, Kim S-T, Iwai S, Harima N, Otoshi E, Ikenaga M, Todo T (1997) J Biol Chem 272:32591
67. Park H-W, Kim S-T, Sancar A, Deisenhofer J (1995) Science 268:1866
68. Hitomi K, Nakamura H, Kim S-T, Mizukoshi T, Ishikawa T, Iwai S, Todo T (2001) J Biol Chem 276:10103
69. Lv XY, Qiao DR, Xiong Y, Xu H, You FF, Cao Y, He X, Cao Y (2008) FEMS Microbiol Lett 283:42
70. Varghese AJ, Wang SY (1968) Biochem Biophys Res Commun 33:102
71. Maul MJ, Barends TRM, Glas AF, Cryle MJ, Domratcheva T, Schneider S, Schlichting I, Carell T (2008) Angew Chem Int Ed 47:10076
72. Mees A, Klar T, Gnau P, Hennecke U, Eker APM, Carell T, Essen L-O (2004) Science 306:1789
73. Sadeghian K, Bocola M, Merz T, Schütz M (2010) J Am Chem Soc 132:16285
74. Domratcheva T, Schlichting I (2009) J Am Chem Soc 131:17793
75. Li J, Liu Z, Tan C, Guo X, Wang L, Sancar A, Zhong D (2010) Nature (London) 466:887
76. Christie JM, Salomon M, Nozue K, Wada M, Briggs WR (1999) Proc Natl Acad Sci USA 96:8779
77. Christie JM (2007) Annu Rev Plant Biol 58:21
78. Briggs WR (2007) J Biomed Sci 14:499
79. Swartz TE, Corchnoy SB, Christie JM, Lewis JW, Szundi I, Briggs WR, Bogomolni RA (2001) J Biol Chem 276:36493
80. Salomon M, Christie JM, Knieb E, Lempert U, Briggs WR (2000) Biochemistry 39:9401
81. Salomon M, Eisenreich W, Dürr H, Schleicher E, Knieb E, Massey V, Rüdiger W, Müller F, Bacher A, Richter G (2001) Proc Natl Acad Sci USA 98:12357
82. Crosson S, Moffat K (2001) Proc Natl Acad Sci USA 98:2995
83. Crosson S, Moffat K (2002) Plant Cell 14:1067
84. Fedorov R, Schlichting I, Hartmann E, Domratcheva T, Fuhrmann M, Hegemann P (2003) Biophys J 84:2474
85. Kasahara M, Swartz TE, Olney MA, Onodera A, Mochizuki N, Fukuzawa H, Asamizu E, Tabata S, Kanegae H, Takano M, Christie JM, Nagatani A, Briggs WR (2002) Plant Physiol 129:762
86. Swartz TE, Tseng T-S, Frederickson MA, Paris G, Comerci DJ, Rajashekara G, Kim J-G, Mudgett MB, Splitter GA, Ugalde RA, Goldbaum FA, Briggs WR, Bogomolni RA (2007) Science 317:1090
87. Harper SM, Neil LC, Gardner KH (2003) Science 301:1541
88. Stehlik D, Möbius K (1997) Annu Rev Phys Chem 48:745
89. Bittl R, Weber S (2005) Biochim Biophys Acta 1707:117
90. Furrer R, Thurnauer MC (1981) Chem Phys Lett 79:28
91. Van Tol J, Brunel LC, Angerhofer A (2001) Appl Magn Reson 21:335
92. Van Tol J, Brunel LC, Wylde RJ (2005) Rev Sci Instrum 76:074101
93. Kowalczyk RM, Schleicher E, Bittl R, Weber S (2004) J Am Chem Soc 126:11393
94. Schleicher E, Kowalczyk RM, Kay CWM, Hegemann P, Bacher A, Fischer M, Bittl R, Richter G, Weber S (2004) J Am Chem Soc 126:11067
95. Turro NJ, Kleinman MH, Karatekin E (2000) Angew Chem Int Ed 39:4436
96. Woodward JR (2002) Prog React Kinet Mech 27:165
97. Hirota N, Yamauchi S (2003) J Photochem Photobiol C Photochem Rev 4:109
98. Merrow M, Roenneberg T (2001) Cell 106:141
99. Froy O, Chang DC, Reppert SM (2002) Curr Biol 12:147
100. Weber S, Kay CWM, Mögling H, Möbius K, Hitomi K, Todo T (2002) Proc Natl Acad Sci USA 99:1319
101. Li YF, Heelis PF, Sancar A (1991) Biochemistry 30:6322
102. Lukacs A, Eker APM, Byrdin M, Brettel K, Vos MH (2008) J Am Chem Soc 130:14394
103. Byrdin M, Sartor V, Eker APM, Vos MH, Aubert C, Brettel K, Mathis P (2004) Biochim Biophys Acta 1655:64
104. Kavakli IH, Sancar A (2004) Biochemistry 43:15103
105. Zeugner A, Byrdin M, Bouly J-P, Bakrim N, Giovani B, Brettel K, Ahmad M (2005) J Biol Chem 280:19437
106. Ritz T, Adem S, Schulten K (2000) Biophys J 78:707
107. Brudler R, Hitomi K, Daiyasu H, Toh H, Kucho K-i, Ishiura M, Kanehisa M, Roberts VA, Todo T, Tainer JA, Getzoff ED (2003) Mol Cell 11:59
108. Klar T, Pokorny R, Moldt J, Batschauer A, Essen L-O (2007) J Mol Biol 366:954
109. Biskup T, Schleicher E, Okafuji A, Link G, Hitomi K, Getzoff ED, Weber S (2009) Angew Chem Int Ed 48:404
110. Henbest KB, Maeda K, Hore PJ, Joshi M, Bacher A, Bittl R, Weber S, Timmel CR, Schleicher E (2008) Proc Natl Acad Sci USA 105:14395
111. Efimova O, Hore PJ (2008) Biophys J 94:1565
112. Weber S, Biskup T, Okafuji A, Marino AR, Berthold T, Link G, Hitomi K, Getzoff ED, Schleicher E, Norris JR (2010) J Phys Chem B 114:14745
113. Mi Q, Ratner MA, Wasielewski MR (2010) J Phys Chem A 114:162
114. Maeda K, Henbest KB, Cintolesi F, Kuprov I, Rodgers CT, Liddell PA, Gust D, Timmel CR, Hore PJ (2008) Nature (London) 453:387
115. Ritz T, Wiltschko R, Hore PJ, Rodgers CT, Stapput K, Thalau P, Timmel CR, Wiltschko W (2009) Biophys J 96:3451
116. Masuda S, Bauer CE (2002) Cell 110:613
117. Gomelsky M, Klug G (2002) Trends Biochem Sci 27:497
118. Anderson S, Dragnea V, Masuda S, Ybe J, Moffat K, Bauer C (2005) Biochemistry 44:7998
119. Kita A, Okajima K, Morimoto Y, Ikeuchi M, Miki K (2005) J Mol Biol 349:1
120. Yuan H, Anderson S, Masuda S, Dragnea V, Moffat K, Bauer C (2006) Biochemistry 45:12687
121. Wu Q, Gardner KH (2009) Biochemistry 48:2620
122. Grinstead JS, Hsu S-TD, Laan W, Bonvin AMJJ, Hellingwerf KJ, Boelens R, Kaptein R (2006) Chembiochem 7:187
123. Gauden M, van Stokkum IHM, Key JM, Lührs DC, van Grondelle R, Hegemann P, Kennis JTM (2006) Proc Natl Acad Sci USA 103:10895
124. Weber S, Schroeder C, Kacprzak S, Mathes T, Kowalczyk RM, Essen L-O, Hegemann P, Schleicher E, Bittl R (2011) Photochem Photobiol 87:574
125. Schleicher E, Bittl R, Weber S (2009) FEBS J 276:4290