-
1
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
Bartel, D. P. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 116, 281-297 (2004).
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
2
-
-
33645294070
-
Oncomirs-microRNAs with a role in cancer
-
Esquela-Kerscher, A. & Slack, F. J. Oncomirs-microRNAs with a role in cancer. Nat Rev Cancer. 6, 259-269 (2006).
-
(2006)
Nat Rev Cancer
, vol.6
, pp. 259-269
-
-
Esquela-Kerscher, A.1
Slack, F.J.2
-
3
-
-
33644659734
-
Mammalian microRNAs: A small world for fine-tuning gene expression
-
DOI 10.1007/s00335-005-0066-3
-
Sevignani, C., Calin, G. A., Siracusa, L. D. & Croce, C. M. Mammalian microRNAs: a small world for fine-tuning gene expression. Mamm Genome. 17, 189-202 (2006). (Pubitemid 43327650)
-
(2006)
Mammalian Genome
, vol.17
, Issue.3
, pp. 189-202
-
-
Sevignani, C.1
Calin, G.A.2
Siracusa, L.D.3
Croce, C.M.4
-
4
-
-
82255185481
-
MiREnvironment database: Providing a bridge for microRNAs environmental factors and phenotypes
-
Yang, Q., Qiu, C., Yang, J., Wu, Q. & Cui, Q. miREnvironment database: providing a bridge for microRNAs, environmental factors and phenotypes. Bioinformatics. 27, 3329-3330 (2011).
-
(2011)
Bioinformatics
, vol.27
, pp. 3329-3330
-
-
Yang, Q.1
Qiu, C.2
Yang, J.3
Wu, Q.4
Cui, Q.5
-
5
-
-
77952584924
-
Targeting microRNAs with small molecules: From dream to reality
-
Zhang, S., Chen, L., Jung, E. J. & Calin, G. A. Targeting microRNAs with small molecules: from dream to reality. Clin Pharmacol Ther. 87, 754-758 (2010).
-
(2010)
Clin Pharmacol Ther
, vol.87
, pp. 754-758
-
-
Zhang, S.1
Chen, L.2
Jung, E.J.3
Calin, G.A.4
-
6
-
-
74049101743
-
RNA inhibition microRNAs, and new therapeutic agents for cancer treatment
-
Spizzo, R., Rushworth, D., Guerrero, M. & Calin, G. A. RNA inhibition, microRNAs, and new therapeutic agents for cancer treatment. Clin Lymphoma Myeloma. 9 Suppl 3, S313-318 (2009).
-
(2009)
Clin Lymphoma Myeloma
, vol.9
, Issue.SUPPL. 3
-
-
Spizzo, R.1
Rushworth, D.2
Guerrero, M.3
Calin, G.A.4
-
7
-
-
67649130547
-
Prospects of RNAi and microRNA-based therapies for hepatitis C
-
Pan, Q., Tilanus, H. W., Janssen, H. L. & van der Laan, L. J. Prospects of RNAi and microRNA-based therapies for hepatitis C. Expert Opin Biol Ther. 9, 713-724 (2009).
-
(2009)
Expert Opin Biol Ther
, vol.9
, pp. 713-724
-
-
Pan, Q.1
Tilanus, H.W.2
Janssen, H.L.3
Van Der Laan, L.J.4
-
8
-
-
74249112787
-
Therapeutic silencing of microRNA-122 in primates with chronic hepatitis C virus infection
-
Lanford, R. E. et al. Therapeutic silencing of microRNA-122 in primates with chronic hepatitis C virus infection. Science. 327, 198-201 (2010).
-
(2010)
Science
, vol.327
, pp. 198-201
-
-
Lanford, R.E.1
-
9
-
-
54749089002
-
Small-molecule inhibitors of microrna miR-21 function
-
Gumireddy, K. et al. Small-molecule inhibitors of microrna miR-21 function. Angew Chem Int Ed Engl. 47, 7482-7484 (2008).
-
(2008)
Angew Chem Int Ed Engl
, vol.47
, pp. 7482-7484
-
-
Gumireddy, K.1
-
10
-
-
38349190243
-
MicroRNAs modulate the chemosensitivity of tumor cells
-
Blower, P. E. et al. MicroRNAs modulate the chemosensitivity of tumor cells. Mol Cancer Ther. 7, 1-9 (2008).
-
(2008)
Mol Cancer Ther
, vol.7
, pp. 1-9
-
-
Blower, P.E.1
-
11
-
-
37349050789
-
Computational analysis of biological functions and pathways collectively targeted by co-expressed microRNAs in cancer
-
Gusev, Y., Schmittgen, T. D., Lerner, M., Postier, R. & Brackett, D. Computational analysis of biological functions and pathways collectively targeted by co-expressed microRNAs in cancer. BMC Bioinformatics. 8 Suppl 7, S16 (2007).
-
(2007)
BMC Bioinformatics
, vol.8
, Issue.SUPPL. 7
-
-
Gusev, Y.1
Schmittgen, T.D.2
Lerner, M.3
Postier, R.4
Brackett, D.5
-
12
-
-
37749027621
-
Pharmacogenomics of microRNA: A miRSNP towards individualized therapy
-
Bertino, J. R., Banerjee, D. & Mishra, P. J. Pharmacogenomics of microRNA: a miRSNP towards individualized therapy. Pharmacogenomics. 8, 1625-1627 (2007).
-
(2007)
Pharmacogenomics
, vol.8
, pp. 1625-1627
-
-
Bertino, J.R.1
Banerjee, D.2
Mishra, P.J.3
-
13
-
-
39049086391
-
MicroRNA expression profiling in human ovarian cancer: miR-214 induces cell survival and cisplatin resistance by targeting PTEN
-
DOI 10.1158/0008-5472.CAN-07-2488
-
Yang, H. et al. MicroRNA expression profiling in human ovarian cancer: miR-214 induces cell survival and cisplatin resistance by targeting PTEN. Cancer Res. 68, 425-433 (2008). (Pubitemid 351380068)
-
(2008)
Cancer Research
, vol.68
, Issue.2
, pp. 425-433
-
-
Yang, H.1
Kong, W.2
He, L.3
Zhao, J.-J.4
O'Donnell, J.D.5
Wang, J.6
Wenham, R.M.7
Coppola, D.8
Kruk, P.A.9
Nicosia, S.V.10
Cheng, J.Q.11
-
14
-
-
77957044703
-
Discovery of drug mode of action and drug repositioning from transcriptional responses
-
Iorio, F. et al. Discovery of drug mode of action and drug repositioning from transcriptional responses. Proc Natl Acad Sci USA. 107, 14621-14626 (2010).
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 14621-14626
-
-
Iorio, F.1
-
15
-
-
33749335282
-
The connectivity map: Using gene-expression signatures to connect small molecules, genes, and disease
-
DOI 10.1126/science.1132939
-
Lamb, J. et al. The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease. Science. 313, 1929-1935 (2006). (Pubitemid 44497995)
-
(2006)
Science
, vol.313
, Issue.5795
, pp. 1929-1935
-
-
Lamb, J.1
Crawford, E.D.2
Peck, D.3
Modell, J.W.4
Blat, I.C.5
Wrobel, M.J.6
Lerner, J.7
Brunet, J.-P.8
Subramanian, A.9
Ross, K.N.10
Reich, M.11
Hieronymus, H.12
Wei, G.13
Armstrong, S.A.14
Haggarty, S.J.15
Clemons, P.A.16
Wei, R.17
Carr, S.A.18
Lander, E.S.19
Golub, T.R.20
more..
-
16
-
-
33847246805
-
Oncomine 3 0: Genes, pathways, and networks in a collection of 18, 000 cancer gene expression profiles
-
Rhodes, D. R. et al. Oncomine 3. 0: genes, pathways, and networks in a collection of 18, 000 cancer gene expression profiles. Neoplasia. 9, 166-180 (2007).
-
(2007)
Neoplasia
, vol.9
, pp. 166-180
-
-
Rhodes, D.R.1
-
17
-
-
2942532642
-
Trichostatin A - Like hydroxamate histone deacetylase inhibitors as therapeutic agents: Toxicological point of view
-
Vanhaecke, T., Papeleu, P., Elaut, G. & Rogiers, V. Trichostatin A-like hydroxamate histone deacetylase inhibitors as therapeutic agents: toxicological point of view. Curr Med Chem. 11, 1629-1643 (2004). (Pubitemid 38735799)
-
(2004)
Current Medicinal Chemistry
, vol.11
, Issue.12
, pp. 1629-1643
-
-
Vanhaecke, T.1
Papeleu, P.2
Elaut, G.3
Rogiers, V.4
-
18
-
-
43249120953
-
Histone deacetylase inhibitors: Mechanisms and clinical significance in cancer: HDAC inhibitor-induced apoptosis
-
Shankar, S. & Srivastava, R. K. Histone deacetylase inhibitors: mechanisms and clinical significance in cancer: HDAC inhibitor-induced apoptosis. Adv Exp Med Biol. 615, 261-298 (2008).
-
(2008)
Adv Exp Med Biol
, vol.615
, pp. 261-298
-
-
Shankar, S.1
Srivastava, R.K.2
-
19
-
-
75649096442
-
The roles of miR-17-92 cluster in mammal development and tumorigenesis
-
Zhang, Z. W., An, Y. & Teng, C. B. [The roles of miR-17-92 cluster in mammal development and tumorigenesis]. Yi Chuan. 31, 1094-1100 (2009).
-
(2009)
Yi Chuan
, vol.31
, pp. 1094-1100
-
-
Zhang, Z.W.1
An, Y.2
Teng, C.B.3
-
20
-
-
34548388833
-
Micro-RNA profiling in kidney and bladder cancers
-
DOI 10.1016/j.urolonc.2007.01.019, PII S1078143907000269, Proceedings: Annual Meeting of the Society of Urologic Oncology (May 2006). Part I: Genitourinary Cancer Biology and Translation
-
Gottardo, F. et al. Micro-RNA profiling in kidney and bladder cancers. Urol Oncol. 25, 387-392 (2007). (Pubitemid 47362758)
-
(2007)
Urologic Oncology: Seminars and Original Investigations
, vol.25
, Issue.5
, pp. 387-392
-
-
Gottardo, F.1
Liu, C.G.2
Ferracin, M.3
Calin, G.A.4
Fassan, M.5
Bassi, P.6
Sevignani, C.7
Byrne, D.8
Negrini, M.9
Pagano, F.10
Gomella, L.G.11
Croce, C.M.12
Baffa, R.13
-
21
-
-
33947104498
-
A micro-RNA signature associated with race, tumor size, and target gene activity in human uterine leiomyomas
-
DOI 10.1002/gcc.20415
-
Wang, T. et al. Amicro-RNA signature associated with race, tumor size, and target gene activity in human uterine leiomyomas. Genes Chromosomes Cancer. 46, 336-347 (2007). (Pubitemid 46411325)
-
(2007)
Genes Chromosomes and Cancer
, vol.46
, Issue.4
, pp. 336-347
-
-
Wang, T.1
Zhang, X.2
Obijuru, L.3
Laser, J.4
Aris, V.5
Lee, P.6
Mittal, K.7
Soteropoulos, P.8
Wei, J.-J.9
-
22
-
-
77954991297
-
Enhancing cytotoxic and apoptotic effect in OVCAR-3 and MDAH-2774 cells with all-trans retinoic acid and zoledronic acid: A paradigm of synergistic molecular targeting treatment for ovarian cancer
-
Karabulut, B. et al. Enhancing cytotoxic and apoptotic effect in OVCAR-3 and MDAH-2774 cells with all-trans retinoic acid and zoledronic acid: a paradigm of synergistic molecular targeting treatment for ovarian cancer. J Exp Clin Cancer Res. 29, 102 (2010).
-
(2010)
J Exp Clin Cancer Res
, vol.29
, Issue.102
-
-
Karabulut, B.1
-
23
-
-
70449995469
-
Identifying genotype-dependent efficacy of single and combined PI3K-and MAPK-pathway inhibition in cancer
-
Sos, M. L. et al. Identifying genotype-dependent efficacy of single and combined PI3K-and MAPK-pathway inhibition in cancer. Proc Natl Acad Sci USA. 106, 18351-18356 (2009).
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 18351-18356
-
-
Sos, M.L.1
-
24
-
-
34547907805
-
Expanding mTOR signaling
-
DOI 10.1038/cr.2007.64, PII CR200764
-
Yang, Q. & Guan, K. L. Expanding mTOR signaling. Cell Res. 17, 666-681 (2007). (Pubitemid 47255937)
-
(2007)
Cell Research
, vol.17
, Issue.8
, pp. 666-681
-
-
Yang, Q.1
Guan, K.-L.2
-
25
-
-
84855960713
-
MiR-129-5p is required for histone deacetylase inhibitor-induced cell death in thyroid cancer cells
-
Brest, P. et al. MiR-129-5p is required for histone deacetylase inhibitor-induced cell death in thyroid cancer cells. Endocr Relat Cancer. 18, 711-719 (2011).
-
(2011)
Endocr Relat Cancer
, vol.18
, pp. 711-719
-
-
Brest, P.1
-
26
-
-
78651353583
-
Methyl-CpG binding protein MBD2 is implicated in methylationmediated suppression of miR-373 in hilar cholangiocarcinoma
-
Chen, Y. et al. Methyl-CpG binding protein MBD2 is implicated in methylationmediated suppression of miR-373 in hilar cholangiocarcinoma. Oncol Rep. 25, 443-451 (2011).
-
(2011)
Oncol Rep
, vol.25
, pp. 443-451
-
-
Chen, Y.1
-
27
-
-
61449558376
-
Effect of trichostatin a on viability and microRNA expression in human pancreatic cancer cell line BxPC-3
-
Zhang, S., Cai, X., Huang, F., Zhong, W. & Yu, Z. Effect of trichostatin a on viability and microRNA expression in human pancreatic cancer cell line BxPC-3. Exp Oncol. 30, 265-268 (2008).
-
(2008)
Exp Oncol
, vol.30
, pp. 265-268
-
-
Zhang, S.1
Cai, X.2
Huang, F.3
Zhong, W.4
Yu, Z.5
-
28
-
-
79959834606
-
Integrative analysis of many weighted co-expression networks using tensor computation
-
Li, W. et al. Integrative analysis of many weighted co-expression networks using tensor computation. PLoS Comput Biol. 7, e1001106 (2011).
-
(2011)
PLoS Comput Biol
, vol.7
-
-
Li, W.1
-
29
-
-
79952199699
-
Identification of microRNA-mRNA modules using microarray data
-
Jayaswal, V., Lutherborrow, M., Ma, D. D. & Yang, Y. H. Identification of microRNA-mRNA modules using microarray data. BMC Genomics. 12, 138 (2011).
-
(2011)
BMC Genomics
, vol.12
, pp. 138
-
-
Jayaswal, V.1
Lutherborrow, M.2
Ma, D.D.3
Yang, Y.H.4
-
30
-
-
79961125191
-
Integrative network analysis identifies key genes and pathways in the progression of hepatitis C virus induced hepatocellular carcinoma
-
Zheng, S., Tansey, W. P., Hiebert, S. W. & Zhao, Z. Integrative network analysis identifies key genes and pathways in the progression of hepatitis C virus induced hepatocellular carcinoma. BMC Med Genomics. 4, 62 (2011).
-
(2011)
BMC Med Genomics
, vol.4
, pp. 62
-
-
Zheng, S.1
Tansey, W.P.2
Hiebert, S.W.3
Zhao, Z.4
-
31
-
-
77954783207
-
Inferringmodules from human protein interactome classes
-
Marras, E., Travaglione, A., Chaurasia, G., Futschik, M. & Capobianco, E. Inferringmodules from human protein interactome classes. BMC Syst Biol. 4, 102 (2010).
-
(2010)
BMC Syst Biol
, vol.4
, pp. 102
-
-
Marras, E.1
Travaglione, A.2
Chaurasia, G.3
Futschik, M.4
Capobianco, E.5
-
33
-
-
47249146126
-
Drug target identification using side-effect similarity
-
DOI 10.1126/science.1158140
-
Campillos, M., Kuhn, M., Gavin, A. C., Jensen, L. J. & Bork, P. Drug target identification using side-effect similarity. Science. 321, 263-266 (2008). (Pubitemid 351989100)
-
(2008)
Science
, vol.321
, Issue.5886
, pp. 263-266
-
-
Campillos, M.1
Kuhn, M.2
Gavin, A.-C.3
Jensen, L.J.4
Bork, P.5
-
34
-
-
38549151817
-
DrugBank: A knowledgebase for drugs, drug actions and drug targets
-
DOI 10.1093/nar/gkm958
-
Wishart, D. S. et al. DrugBank: a knowledgebase for drugs, drug actions and drug targets. Nucleic Acids Res. 36, D901-906 (2008). (Pubitemid 351149842)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
Wishart, D.S.1
Knox, C.2
Guo, A.C.3
Cheng, D.4
Shrivastava, S.5
Tzur, D.6
Gautam, B.7
Hassanali, M.8
-
35
-
-
0037068532
-
Do structurally similar molecules have similar biological activity?
-
DOI 10.1021/jm020155c
-
Martin, Y. C., Kofron, J. L. & Traphagen, L. M. Do structurally similar molecules have similar biological activity? J Med Chem. 45, 4350-4358 (2002). (Pubitemid 35025581)
-
(2002)
Journal of Medicinal Chemistry
, vol.45
, Issue.19
, pp. 4350-4358
-
-
Martin, Y.C.1
Kofron, J.L.2
Traphagen, L.M.3
-
36
-
-
0034976119
-
Islet cell tumors of the pancreas: The medical oncologist's perspective
-
DOI 10.1016/S0039-6109(05)70141-9
-
Brentjens, R. & Saltz, L. Islet cell tumors of the pancreas: the medical oncologist's perspective. Surg Clin North Am. 81, 527-542 (2001). (Pubitemid 32612114)
-
(2001)
Surgical Clinics of North America
, vol.81
, Issue.3
, pp. 527-542
-
-
Brentjens, R.1
Saltz, L.2
-
37
-
-
78751556979
-
Autophagy as a therapeutic target in cancer
-
Chen, N. & Karantza, V. Autophagy as a therapeutic target in cancer. Cancer Biol Ther. 11, 157-168 (2011).
-
(2011)
Cancer Biol Ther
, vol.11
, pp. 157-168
-
-
Chen, N.1
Karantza, V.2
-
38
-
-
0037163688
-
Evaluation of 2-deoxy-D-glucose as a chemotherapeutic agent: Mechanism of cell death
-
DOI 10.1038/sj.bjc.6600547
-
Aft, R. L., Zhang, F. W. & Gius, D. Evaluation of 2-deoxy-D-glucose as a chemotherapeutic agent:mechanism of cell death. Br J Cancer. 87, 805-812 (2002). (Pubitemid 35178760)
-
(2002)
British Journal of Cancer
, vol.87
, Issue.7
, pp. 805-812
-
-
Aft, R.L.1
Zhang, F.W.2
Gius, D.3
-
39
-
-
77951246917
-
Chemosensitizing and cytotoxic effects of 2-deoxy-Dglucose on breast cancer cells
-
Zhang, F. & Aft, R. L. Chemosensitizing and cytotoxic effects of 2-deoxy-Dglucose on breast cancer cells. J Cancer Res Ther. 5 Suppl 1, S41-43 (2009).
-
(2009)
J Cancer Res Ther
, vol.5
, Issue.SUPPL. 1
-
-
Zhang, F.1
Aft, R.L.2
-
40
-
-
0037180757
-
Inflammation and cancer
-
DOI 10.1038/nature01322
-
Coussens, L. M. & Werb, Z. Inflammation and cancer. Nature. 420, 860-867 (2002). (Pubitemid 36019639)
-
(2002)
Nature
, vol.420
, Issue.6917
, pp. 860-867
-
-
Coussens, L.M.1
Werb, Z.2
-
41
-
-
71149114452
-
Estrogen treatment following severe burn injury reduces brain inflammation and apoptotic signaling
-
Gatson, J. W. et al. Estrogen treatment following severe burn injury reduces brain inflammation and apoptotic signaling. J Neuroinflammation. 6, 30 (2009).
-
(2009)
J Neuroinflammation
, vol.6
, pp. 30
-
-
Gatson, J.W.1
-
42
-
-
79952199699
-
Identification of microRNA-mRNA Modules using Microarray Data
-
Jayaswal, V., Lutherborrow, M., Ma, D. D. & Yang, Y. H. Identification of microRNA-mRNA Modules using Microarray Data. BMC Genomics. 12, 138 (2011).
-
(2011)
BMC Genomics
, vol.12
, pp. 138
-
-
Jayaswal, V.1
Lutherborrow, M.2
Ma, D.D.3
Yang, Y.H.4
-
43
-
-
84859769301
-
Dissection of humanMiRNA regulatory influence to subpathway
-
Li, X. et al. Dissection of humanMiRNA regulatory influence to subpathway. Brief Bioinform. (2011).
-
(2011)
Brief Bioinform
-
-
Li, X.1
-
44
-
-
4644237189
-
Fast and effective prediction of microRNA/target duplexes
-
DOI 10.1261/rna.5248604
-
Rehmsmeier, M., Steffen, P., Hochsmann, M. & Giegerich, R. Fast and effective prediction of microRNA/target duplexes. RNA. 10, 1507-1517 (2004). (Pubitemid 39288185)
-
(2004)
RNA
, vol.10
, Issue.10
, pp. 1507-1517
-
-
Rehmsmeier, M.1
Steffen, P.2
Hochsmann, M.3
Giegerich, R.4
-
45
-
-
2442672918
-
A combined computational-experimental approach predicts human microRNA targets
-
DOI 10.1101/gad.1184704
-
Kiriakidou, M. et al. A combined computational-experimental approach predicts human microRNA targets. Genes Dev. 18, 1165-1178 (2004). (Pubitemid 38669037)
-
(2004)
Genes and Development
, vol.18
, Issue.10
, pp. 1165-1178
-
-
Kiriakidou, M.1
Nelson, P.T.2
Kouranov, A.3
Fitziev, P.4
Bouyioukos, C.5
Mourelatos, Z.6
Hatzigeorgiou, A.7
-
46
-
-
33748587841
-
A pattern-based method for the identification of microRNA binding sites and their corresponding heteroduplexes
-
DOI 10.1016/j.cell.2006.07.031, PII S0092867406010993
-
Miranda, K. C. et al. A pattern-based method for the identification of MicroRNA binding sites and their corresponding heteroduplexes. Cell. 126, 1203-1217 (2006). (Pubitemid 44380294)
-
(2006)
Cell
, vol.126
, Issue.6
, pp. 1203-1217
-
-
Miranda, K.C.1
Huynh, T.2
Tay, Y.3
Ang, Y.-S.4
Tam, W.-L.5
Thomson, A.M.6
Lim, B.7
Rigoutsos, I.8
-
47
-
-
38549150275
-
MiRBase: Tools for microRNA genomics
-
DOI 10.1093/nar/gkm952
-
Griffiths-Jones, S., Saini, H. K., van Dongen, S. & Enright, A. J. miRBase: tools for microRNA genomics. Nucleic Acids Res. 36, D154-158 (2008). (Pubitemid 351149713)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
Griffiths-Jones, S.1
Saini, H.K.2
Van Dongen, S.3
Enright, A.J.4
-
48
-
-
0842321501
-
MicroRNA targets in Drosophila
-
Enright, A. J. et al. MicroRNA targets in Drosophila. Genome Biol. 5, R1 (2003).
-
(2003)
Genome Biol
, vol.5
-
-
Enright, A.J.1
-
49
-
-
20944450160
-
Combinatorial microRNA target predictions
-
DOI 10.1038/ng1536
-
Krek, A. et al. Combinatorial microRNA target predictions. Nat Genet. 37, 495-500 (2005). (Pubitemid 40617277)
-
(2005)
Nature Genetics
, vol.37
, Issue.5
, pp. 495-500
-
-
Krek, A.1
Grun, D.2
Poy, M.N.3
Wolf, R.4
Rosenberg, L.5
Epstein, E.J.6
MacMenamin, P.7
Da Piedade, I.8
Gunsalus, K.C.9
Stoffel, M.10
Rajewsky, N.11
-
50
-
-
0346094457
-
Prediction of mammalian microRNA targets
-
DOI 10.1016/S0092-8674(03)01018-3
-
Lewis, B. P., Shih, I. H., Jones-Rhoades, M. W., Bartel, D. P. & Burge, C. B. Prediction of mammalian microRNA targets. Cell. 115, 787-798 (2003). (Pubitemid 38058492)
-
(2003)
Cell
, vol.115
, Issue.7
, pp. 787-798
-
-
Lewis, B.P.1
Shih, I.-H.2
Jones-Rhoades, M.W.3
Bartel, D.P.4
Burge, C.B.5
-
51
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang da, W., Sherman, B. T. & Lempicki, R. A. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc. 4, 44-57 (2009).
-
(2009)
Nat Protoc
, vol.4
, pp. 44-57
-
-
Huang Da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
52
-
-
34547799698
-
Easy GO: Gene Ontology-based annotation and functional enrichment analysis tool for agronomical species
-
Zhou, X. & Su, Z. EasyGO: Gene Ontology-based annotation and functional enrichment analysis tool for agronomical species. BMC Genomics. 8, 246 (2007).
-
(2007)
BMC Genomics
, vol.8
, pp. 246
-
-
Zhou, X.1
Su, Z.2
-
53
-
-
71049148804
-
Subpathway Miner: A software package for flexible identification of pathways
-
Li, C. et al. SubpathwayMiner: a software package for flexible identification of pathways. Nucleic Acids Res. 37, e131 (2009).
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Li, C.1
-
54
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
-
DOI 10.1073/pnas.0506580102
-
Subramanian, A. et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA. 102, 15545-15550 (2005). (Pubitemid 41528093)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.43
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
Gillette, M.A.6
Paulovich, A.7
Pomeroy, S.L.8
Golub, T.R.9
Lander, E.S.10
Mesirov, J.P.11
-
55
-
-
56649116111
-
Gene expression module-based chemical function similarity search
-
Li, Y. et al. Gene expression module-based chemical function similarity search. Nucleic Acids Res. 36, e137 (2008).
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Li, Y.1
-
56
-
-
67849104638
-
PubChem: A public information system for analyzing bioactivities of small molecules
-
Wang, Y. et al. PubChem: a public information system for analyzing bioactivities of small molecules. Nucleic Acids Res. 37, W623-633 (2009).
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Wang, Y.1
-
57
-
-
74049089230
-
Small molecule subgraph detector (SMSD) toolkit
-
Rahman, S. A., Bashton, M., Holliday, G. L., Schrader, R. & Thornton, J. M. Small Molecule Subgraph Detector (SMSD) toolkit. J Cheminform. 1, 12 (2009).
-
(2009)
J Cheminform
, vol.1
, pp. 12
-
-
Rahman, S.A.1
Bashton, M.2
Holliday, G.L.3
Schrader, R.4
Thornton, J.M.5
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