-
1
-
-
70350731129
-
Epigenetic regulation of microRNA expression in colorectal cancer
-
doi:10.1002/ijc.24638
-
Bandres E, Agirre X, Bitarte N, Ramirez N, Zarate R, Roman-Gomez J, Prosper F & Garcia-Foncillas J 2009 Epigenetic regulation of microRNA expression in colorectal cancer. International Journal of Cancer 125 2737-2743. (doi:10.1002/ijc.24638)
-
(2009)
International Journal of Cancer
, vol.125
, pp. 2737-2743
-
-
Bandres, E.1
Agirre, X.2
Bitarte, N.3
Ramirez, N.4
Zarate, R.5
Roman-Gomez, J.6
Prosper, F.7
Garcia-Foncillas, J.8
-
3
-
-
37049000403
-
Histone deacetylase inhibitors promote the tumoricidal effect of HAMLET
-
doi:10.1158/0008-5472.CAN-07-1153
-
Brest P, Gustafsson M, Mossberg AK, Gustafsson L, Duringer C, Hamiche A & Svanborg C 2007 Histone deacetylase inhibitors promote the tumoricidal effect of HAMLET. Nature Reviews. Drug Discovery 67 11327-11334. (doi:10.1158/0008-5472.CAN-07-1153)
-
(2007)
Nature Reviews. Drug Discovery
, vol.67
, pp. 11327-11334
-
-
Brest, P.1
Gustafsson, M.2
Mossberg, A.K.3
Gustafsson, L.4
Duringer, C.5
Hamiche, A.6
Svanborg, C.7
-
4
-
-
33750370444
-
MicroRNA signatures in human cancers
-
doi:10.1038/nrc1997
-
Calin GA & Croce CM 2006a MicroRNA signatures in human cancers. Nature Reviews. Cancer 6 857-866. (doi:10.1038/nrc1997)
-
(2006)
Nature Reviews. Cancer
, vol.6
, pp. 857-866
-
-
Calin, G.A.1
Croce, C.M.2
-
5
-
-
33749516448
-
MicroRNAs and chromosomal abnormalities in cancer cells
-
doi:10.1038/sj.onc.1209910
-
Calin GA & Croce CM 2006b MicroRNAs and chromosomal abnormalities in cancer cells. Oncogene 25 6202-6210. (doi:10.1038/sj.onc.1209910)
-
(2006)
Oncogene
, vol.25
, pp. 6202-6210
-
-
Calin, G.A.1
Croce, C.M.2
-
6
-
-
15944372866
-
Valproic acid induces apoptosis and cell cycle arrest in poorly differentiated thyroid cancer cells
-
doi:10.1210/jc.2004-1355
-
Catalano MG, Fortunati N, Pugliese M, Costantino L, Poli R, Bosco O & Boccuzzi G 2005 Valproic acid induces apoptosis and cell cycle arrest in poorly differentiated thyroid cancer cells. Journal of Clinical Endocrinology and Metabolism 90 1383-1389. (doi:10.1210/jc.2004-1355)
-
(2005)
Journal of Clinical Endocrinology and Metabolism
, vol.90
, pp. 1383-1389
-
-
Catalano, M.G.1
Fortunati, N.2
Pugliese, M.3
Costantino, L.4
Poli, R.5
Bosco, O.6
Boccuzzi, G.7
-
7
-
-
33751505528
-
Valproic acid, a histone deacetylase inhibitor, enhances sensitivity to doxorubicin in anaplastic thyroid cancer cells
-
doi:10.1677/joe.1.06970
-
Catalano MG, Fortunati N, Pugliese M, Poli R, Bosco O, Mastrocola R, Aragno M & Boccuzzi G 2006 Valproic acid, a histone deacetylase inhibitor, enhances sensitivity to doxorubicin in anaplastic thyroid cancer cells. Journal of Endocrinology 191 465-472. (doi:10.1677/joe.1.06970)
-
(2006)
Journal of Endocrinology
, vol.191
, pp. 465-472
-
-
Catalano, M.G.1
Fortunati, N.2
Pugliese, M.3
Poli, R.4
Bosco, O.5
Mastrocola, R.6
Aragno, M.7
Boccuzzi, G.8
-
8
-
-
33845209109
-
Histone deacetylase inhibitors and paclitaxel cause synergistic effects on apoptosis and microtubule stabilization in papillary serous endometrial cancer cells
-
doi:10.1158/1535-7163.MCT-06-0209
-
Dowdy SC, Jiang S, Zhou XC, Hou X, Jin F, Podratz KC & Jiang SW 2006 Histone deacetylase inhibitors and paclitaxel cause synergistic effects on apoptosis and microtubule stabilization in papillary serous endometrial cancer cells. Molecular Cancer Therapeutics 5 2767-2776. (doi:10.1158/1535-7163.MCT-06- 0209)
-
(2006)
Molecular Cancer Therapeutics
, vol.5
, pp. 2767-2776
-
-
Dowdy, S.C.1
Jiang, S.2
Zhou, X.C.3
Hou, X.4
Jin, F.5
Podratz, K.C.6
Jiang, S.W.7
-
9
-
-
66349104794
-
Genomic profiling of microRNAs in bladder cancer: MiR-129 is associatedwith poor outcome and promotes cell death in vitro
-
doi:10.1158/0008-5472.CAN-08-4043
-
Dyrskjot L, Ostenfeld MS, Bramsen JB, Silahtaroglu AN, Lamy P, Ramanathan R, Fristrup N, Jensen JL, Andersen CL, Zieger K et al. 2009 Genomic profiling of microRNAs in bladder cancer: miR-129 is associatedwith poor outcome and promotes cell death in vitro. Cancer Research 69 4851-4860. (doi:10.1158/0008- 5472.CAN-08-4043)
-
(2009)
Cancer Research
, vol.69
, pp. 4851-4860
-
-
Dyrskjot, L.1
Ostenfeld, M.S.2
Bramsen, J.B.3
Silahtaroglu, A.N.4
Lamy, P.5
Ramanathan, R.6
Fristrup, N.7
Jensen, J.L.8
Andersen, C.L.9
Zieger, K.10
-
10
-
-
33645294070
-
Oncomirs - Micro- RNAs with a role in cancer
-
doi:10.1038/nrc1840
-
Esquela-Kerscher A & Slack FJ 2006 Oncomirs - micro- RNAs with a role in cancer. Nature Reviews. Cancer 6 259-269. (doi:10.1038/nrc1840)
-
(2006)
Nature Reviews. Cancer
, vol.6
, pp. 259-269
-
-
Esquela-Kerscher, A.1
Slack, F.J.2
-
11
-
-
0028327537
-
Description of a human papillary thyroid carcinoma cell line. Morphologic study and expression of tumoral markers
-
doi:10.1002/1097-0142(19940415)73:8〈2206::AID-CNCR2820730828〉3. 0.CO;2-M
-
Fabien N, Fusco A, Santoro M, Barbier Y, Dubois PM & Paulin C 1994 Description of a human papillary thyroid carcinoma cell line. Morphologic study and expression of tumoral markers. Cancer 73 2206-2212. (doi:10.1002/1097- 0142(19940415)73:8〈2206::AID-CNCR2820730828〉3.0.CO;2-M)
-
(1994)
Cancer
, vol.73
, pp. 2206-2212
-
-
Fabien, N.1
Fusco, A.2
Santoro, M.3
Barbier, Y.4
Dubois, P.M.5
Paulin, C.6
-
12
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
doi:10.1186/gb-2004-5-10-r80
-
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J et al. 2004 Bioconductor: open software development for computational biology and bioinformatics. Genome Biology 5 R80. (doi:10.1186/gb-2004-5-10-r80)
-
(2004)
Genome Biology
, vol.5
-
-
Gentleman, R.C.1
Carey, V.J.2
Bates, D.M.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
Ellis, B.7
Gautier, L.8
Ge, Y.9
Gentry, J.10
-
13
-
-
0025836874
-
Characterization of a human cell line from an anaplastic carcinoma of the thyroid gland
-
Gioanni J, Zanghellini E, Mazeau C, Zhang D, Courdi A, Farges M, Lambert JC, Duplay H & Schneider M 1991 Characterization of a human cell line from an anaplastic carcinoma of the thyroid gland. Bulletin du Cancer 78 1053-1062.
-
(1991)
Bulletin du Cancer
, vol.78
, pp. 1053-1062
-
-
Gioanni, J.1
Zanghellini, E.2
Mazeau, C.3
Zhang, D.4
Courdi, A.5
Farges, M.6
Lambert, J.C.7
Duplay, H.8
Schneider, M.9
-
14
-
-
0035023260
-
Histone deacetylase inhibitors promote apoptosis and differential cell cycle arrest in anaplastic thyroid cancer cells
-
doi:10.1089/10507250152039046
-
Greenberg VL, Williams JM, Cogswell JP, Mendenhall M & Zimmer SG 2001 Histone deacetylase inhibitors promote apoptosis and differential cell cycle arrest in anaplastic thyroid cancer cells. Thyroid 11 315-325. (doi:10.1089/10507250152039046)
-
(2001)
Thyroid
, vol.11
, pp. 315-325
-
-
Greenberg, V.L.1
Williams, J.M.2
Cogswell, J.P.3
Mendenhall, M.4
Zimmer, S.G.5
-
15
-
-
0034614637
-
The hallmarks of cancer
-
doi:10.1016/S0092-8674(00)81683-9
-
Hanahan D & Weinberg RA 2000 The hallmarks of cancer. Cell 100 57-70. (doi:10.1016/S0092-8674(00)81683-9)
-
(2000)
Cell
, vol.100
, pp. 57-70
-
-
Hanahan, D.1
Weinberg, R.A.2
-
16
-
-
11244346557
-
Variance stabilization applied to microarray data calibration and to the quantification of differential expression
-
doi:10.1093/bioinformatics/18.suppl-1.S96
-
Huber W, von Heydebreck A, Sultmann H, Poustka A & Vingron M 2002 Variance stabilization applied to microarray data calibration and to the quantification of differential expression. Bioinformatics 18 (Suppl 1) S96-S104. (doi:10.1093/bioinformatics/18.suppl-1.S96)
-
(2002)
Bioinformatics
, vol.18
, Issue.SUPPL. 1
-
-
Huber, W.1
Von Heydebreck, A.2
Sultmann, H.3
Poustka, A.4
Vingron, M.5
-
17
-
-
0027305591
-
In vitro irradiation is able to cause RET oncogene rearrangement
-
Ito T, Seyama T, Iwamoto KS, Hayashi T, Mizuno T, Tsuyama N, Dohi K, Nakamura N & Akiyama M 1993 In vitro irradiation is able to cause RET oncogene rearrangement. Cancer Research 53 2940-2943. (Pubitemid 23210290)
-
(1993)
Cancer Research
, vol.53
, Issue.13
, pp. 2940-2943
-
-
Ito, T.1
Seyama, T.2
Iwamoto, K.S.3
Hayashi, T.4
Mizuno, T.5
Tsuyama, N.6
Dohi, K.7
Nakamura, N.8
Akiyama, M.9
-
18
-
-
33847065486
-
The epigenomics of cancer
-
doi:10.1016/j.cell.2007.01.029
-
Jones PA & Baylin SB 2007 The epigenomics of cancer. Cell 128 683-692. (doi:10.1016/j.cell.2007.01.029)
-
(2007)
Cell
, vol.128
, pp. 683-692
-
-
Jones, P.A.1
Baylin, S.B.2
-
19
-
-
33746847084
-
An open-access long oligonucleotide microarray resource for analysis of the human andmouse transcriptomes
-
doi:10.1093/nar/gkl485
-
Le Brigand K, Russell R, Moreilhon C, Rouillard JM, Jost B, Amiot F, Magnone V, Bole-Feysot C, Rostagno P, Virolle V et al. 2006 An open-access long oligonucleotide microarray resource for analysis of the human andmouse transcriptomes. Nucleic Acids Research 34 e87. (doi:10.1093/nar/gkl485)
-
(2006)
Nucleic Acids Research
, vol.34
-
-
Le Brigand, K.1
Russell, R.2
Moreilhon, C.3
Rouillard, J.M.4
Jost, B.5
Amiot, F.6
Magnone, V.7
Bole-Feysot, C.8
Rostagno, P.9
Virolle, V.10
-
20
-
-
16544379283
-
Sequence-specific potentiation of topoisomerase II inhibitors by the histone deacetylase inhibitor suberoylanilide hydroxamic acid
-
doi:10.1002/jcb.20045
-
Marchion DC, Bicaku E, Daud AI, Richon V, Sullivan DM & Munster PN 2004 Sequence-specific potentiation of topoisomerase II inhibitors by the histone deacetylase inhibitor suberoylanilide hydroxamic acid. Journal of Cellular Biochemistry 92 223-237. (doi:10.1002/jcb.20045)
-
(2004)
Journal of Cellular Biochemistry
, vol.92
, pp. 223-237
-
-
Marchion, D.C.1
Bicaku, E.2
Daud, A.I.3
Richon, V.4
Sullivan, D.M.5
Munster, P.N.6
-
21
-
-
18844454753
-
Novel histone deacetylase inhibitors in the treatment of thyroid cancer
-
doi:10.1158/1078-0432.CCR-03-0776
-
Mitsiades CS, Poulaki V, McMullan C, Negri J, Fanourakis G, Goudopoulou A, Richon VM, Marks PA & Mitsiades N 2005 Novel histone deacetylase inhibitors in the treatment of thyroid cancer. Clinical Cancer Research 11 3958-3965. (doi:10.1158/1078-0432.CCR-03-0776)
-
(2005)
Clinical Cancer Research
, vol.11
, pp. 3958-3965
-
-
Mitsiades, C.S.1
Poulaki, V.2
McMullan, C.3
Negri, J.4
Fanourakis, G.5
Goudopoulou, A.6
Richon, V.M.7
Marks, P.A.8
Mitsiades, N.9
-
22
-
-
66849128440
-
Successful treatment of anaplastic thyroid carcinoma with a combination of oral valproic acid, chemotherapy, radiation and surgery
-
doi:10.1507/endocrj.K08E-016
-
Noguchi H, Yamashita H, Murakami T, Hirai K, Noguchi Y, Maruta J, Yokoi T & Noguchi S 2009 Successful treatment of anaplastic thyroid carcinoma with a combination of oral valproic acid, chemotherapy, radiation and surgery. Endocrine Journal 56 245-249. (doi:10.1507/endocrj.K08E-016)
-
(2009)
Endocrine Journal
, vol.56
, pp. 245-249
-
-
Noguchi, H.1
Yamashita, H.2
Murakami, T.3
Hirai, K.4
Noguchi, Y.5
Maruta, J.6
Yokoi, T.7
Noguchi, S.8
-
23
-
-
69249202575
-
Identification of keratinocyte growth factor as a target of microRNA-155 in lung fibroblasts: Implication in epithelial-mesenchymal interactions
-
doi:10.1371/journal.pone.0006718
-
Pottier N, Maurin T, Chevalier B, Puissegur MP, Lebrigand K, Robbe-Sermesant K, Bertero T, Lino Cardenas CL, Courcot E, Rios G et al. 2009 Identification of keratinocyte growth factor as a target of microRNA-155 in lung fibroblasts: implication in epithelial-mesenchymal interactions. PLoS ONE 4 e6718. (doi:10.1371/journal.pone.0006718)
-
(2009)
PLoS ONE
, vol.4
-
-
Pottier, N.1
Maurin, T.2
Chevalier, B.3
Puissegur, M.P.4
Lebrigand, K.5
Robbe-Sermesant, K.6
Bertero, T.7
Lino Cardenas, C.L.8
Courcot, E.9
Rios, G.10
-
24
-
-
67449127082
-
Clinical studies of histone deacetylase inhibitors
-
doi:10.1158/1078-0432.CCR-08-2785
-
Prince HM, Bishton MJ & Harrison SJ 2009 Clinical studies of histone deacetylase inhibitors. Clinical Cancer Research 15 3958-3969. (doi:10.1158/1078-0432.CCR-08-2785)
-
(2009)
Clinical Cancer Research
, vol.15
, pp. 3958-3969
-
-
Prince, H.M.1
Bishton, M.J.2
Harrison, S.J.3
-
25
-
-
35748949257
-
A comparison of background correction methods for two-colour microarrays
-
doi:10.1093/bioinformatics/btm412
-
Ritchie ME, Silver J, Oshlack A, Holmes M, Diyagama D, Holloway A & Smyth GK 2007 A comparison of background correction methods for two-colour microarrays. Bioinformatics 23 2700-2707. (doi:10.1093/bioinformatics/btm412)
-
(2007)
Bioinformatics
, vol.23
, pp. 2700-2707
-
-
Ritchie, M.E.1
Silver, J.2
Oshlack, A.3
Holmes, M.4
Diyagama, D.5
Holloway, A.6
Smyth, G.K.7
-
26
-
-
0034737439
-
Initiation of DNA fragmentation during apoptosis induces phosphorylation of H2AX histone at serine 139
-
doi:10.1074/jbc.275.13.9390
-
Rogakou EP, Nieves-Neira W, Boon C, Pommier Y & Bonner WM 2000 Initiation of DNA fragmentation during apoptosis induces phosphorylation of H2AX histone at serine 139. Journal of Biological Chemistry 275 9390-9395. (doi:10.1074/jbc.275.13.9390)
-
(2000)
Journal of Biological Chemistry
, vol.275
, pp. 9390-9395
-
-
Rogakou, E.P.1
Nieves-Neira, W.2
Boon, C.3
Pommier, Y.4
Bonner, W.M.5
-
27
-
-
32944462300
-
Rapid alteration of microRNA levels by histone deacetylase inhibition
-
doi:10.1158/0008-5472.CAN-05-3632
-
Scott GK, Mattie MD, Berger CE, Benz SC & Benz CC 2006 Rapid alteration of microRNA levels by histone deacetylase inhibition. Cancer Research 66 1277-1281. (doi:10.1158/0008-5472.CAN-05-3632)
-
(2006)
Cancer Research
, vol.66
, pp. 1277-1281
-
-
Scott, G.K.1
Mattie, M.D.2
Berger, C.E.3
Benz, S.C.4
Benz, C.C.5
-
28
-
-
18044366441
-
Histone deacetylase inhibitors induce G2-checkpoint arrest and apoptosis in cisplatinum-resistant ovarian cancer cells associated with overexpression of the Bcl-2-related protein Bad
-
doi:10.1158/1535-7163.MCT-04-0107
-
Strait KA, Warnick CT, Ford CD, Dabbas B, Hammond EH & Ilstrup SJ 2005 Histone deacetylase inhibitors induce G2-checkpoint arrest and apoptosis in cisplatinum-resistant ovarian cancer cells associated with overexpression of the Bcl-2-related protein Bad. Molecular Cancer Therapeutics 4 603-611. (doi:10.1158/1535-7163.MCT-04-0107)
-
(2005)
Molecular Cancer Therapeutics
, vol.4
, pp. 603-611
-
-
Strait, K.A.1
Warnick, C.T.2
Ford, C.D.3
Dabbas, B.4
Hammond, E.H.5
Ilstrup, S.J.6
-
29
-
-
0034636156
-
Conversion of alpha-lactalbumin to a protein inducing apoptosis
-
doi:10.1073/pnas.97.8.4221
-
Svensson M, Hakansson A, Mossberg AK, Linse S & Svanborg C 2000 Conversion of alpha-lactalbumin to a protein inducing apoptosis. PNAS 97 4221-4226. (doi:10.1073/pnas.97.8.4221)
-
(2000)
PNAS
, vol.97
, pp. 4221-4226
-
-
Svensson, M.1
Hakansson, A.2
Mossberg, A.K.3
Linse, S.4
Svanborg, C.5
-
30
-
-
33947385291
-
Suppression of microRNA-silencing pathway by HIV-1 during virus replication
-
doi:10.1126/science.1136319
-
Triboulet R, Mari B, Lin YL, Chable-Bessia C, Bennasser Y, Lebrigand K, Cardinaud B, Maurin T, Barbry P, Baillat V et al. 2007 Suppression of microRNA-silencing pathway by HIV-1 during virus replication. Science 315 1579-1582. (doi:10.1126/science.1136319)
-
(2007)
Science
, vol.315
, pp. 1579-1582
-
-
Triboulet, R.1
Mari, B.2
Lin, Y.L.3
Chable-Bessia, C.4
Bennasser, Y.5
Lebrigand, K.6
Cardinaud, B.7
Maurin, T.8
Barbry, P.9
Baillat, V.10
-
31
-
-
12344330424
-
LimmaGUI: A graphical user interface for linear modeling of microarray data
-
doi:10.1093/bioinformatics/bth449
-
Wettenhall JM& Smyth GK 2004 limmaGUI: a graphical user interface for linear modeling of microarray data. Bioinformatics 20 3705-3706. (doi:10.1093/bioinformatics/bth449)
-
(2004)
Bioinformatics
, vol.20
, pp. 3705-3706
-
-
Wettenhall, J.1
Smyth, G.K.2
|