메뉴 건너뛰기




Volumn 1819, Issue 2, 2012, Pages 176-185

Genetic and epigenetic regulation of stress responses in natural plant populations

Author keywords

Epigenetic variation; Evolution; Genetic variation; Natural population; Stress

Indexed keywords

CELL NUCLEUS DNA; HISTONE; SMALL INTERFERING RNA;

EID: 84856596099     PISSN: 18749399     EISSN: 18764320     Source Type: Journal    
DOI: 10.1016/j.bbagrm.2011.08.010     Document Type: Review
Times cited : (133)

References (111)
  • 2
    • 0020458787 scopus 로고
    • Plant productivity and environment
    • Boyer J.S. Plant productivity and environment. Science 1982, 218:443-448.
    • (1982) Science , vol.218 , pp. 443-448
    • Boyer, J.S.1
  • 4
    • 14744272333 scopus 로고    scopus 로고
    • The effect of stress on genome regulation and structure
    • Madlung A., Comai L. The effect of stress on genome regulation and structure. Ann. Bot. 2004, 94:481-495.
    • (2004) Ann. Bot. , vol.94 , pp. 481-495
    • Madlung, A.1    Comai, L.2
  • 5
    • 39749120481 scopus 로고    scopus 로고
    • Epigenetic control of plant stress response
    • Boyko A., Kovalchuk I. Epigenetic control of plant stress response. Environ. Mol. Mutagen. 2008, 49:61-72.
    • (2008) Environ. Mol. Mutagen. , vol.49 , pp. 61-72
    • Boyko, A.1    Kovalchuk, I.2
  • 6
    • 35248837425 scopus 로고    scopus 로고
    • Stressful "memories" of plants: evidence and possible mechanisms
    • Bruce T., Matthes M., Napier J., Pickett J. Stressful "memories" of plants: evidence and possible mechanisms. Plant Sci. 2007, 173:603-608.
    • (2007) Plant Sci. , vol.173 , pp. 603-608
    • Bruce, T.1    Matthes, M.2    Napier, J.3    Pickett, J.4
  • 7
    • 54149109197 scopus 로고    scopus 로고
    • Epigenome dynamics: a quantitative genetics perspective
    • Johannes F., Colot V., Jansen R.C. Epigenome dynamics: a quantitative genetics perspective. Nat. Rev. Genet. 2008, 9:883-890.
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 883-890
    • Johannes, F.1    Colot, V.2    Jansen, R.C.3
  • 8
    • 2942598781 scopus 로고    scopus 로고
    • Epialleles via DNA methylation: consequences for plant evolution
    • Kalisz S., Purugganan M.D. Epialleles via DNA methylation: consequences for plant evolution. Trends Ecol. Evol. 2004, 19:309-314.
    • (2004) Trends Ecol. Evol. , vol.19 , pp. 309-314
    • Kalisz, S.1    Purugganan, M.D.2
  • 10
    • 41949131536 scopus 로고    scopus 로고
    • Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays
    • Zhang X., Shiu S.-H., Shiu S., Cal A., Borevitz J.O. Global analysis of genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana using whole genome tiling arrays. PLoS Genet. 2008, 4:e1000032.
    • (2008) PLoS Genet. , vol.4
    • Zhang, X.1    Shiu, S.-H.2    Shiu, S.3    Cal, A.4    Borevitz, J.O.5
  • 11
    • 0036743496 scopus 로고    scopus 로고
    • The control of natural variation in cytosine methylation in Arabidopsis
    • Riddle N.C., Richards E.J. The control of natural variation in cytosine methylation in Arabidopsis. Genetics 2002, 162:355-363.
    • (2002) Genetics , vol.162 , pp. 355-363
    • Riddle, N.C.1    Richards, E.J.2
  • 12
    • 14644415590 scopus 로고    scopus 로고
    • Genetic variation in epigenetic inheritance of ribosomal RNA gene methylation in Arabidopsis
    • Riddle N.C., Richards E.J. Genetic variation in epigenetic inheritance of ribosomal RNA gene methylation in Arabidopsis. Plant J. 2005, 41:524-532.
    • (2005) Plant J. , vol.41 , pp. 524-532
    • Riddle, N.C.1    Richards, E.J.2
  • 13
    • 70449087193 scopus 로고    scopus 로고
    • Plant genomic DNA methylation in response to stresses: potential applications and challenges in plant breeding
    • Peng H., Zhang J. Plant genomic DNA methylation in response to stresses: potential applications and challenges in plant breeding. Prog. Nat. Sci. 2009, 19:1037-1045.
    • (2009) Prog. Nat. Sci. , vol.19 , pp. 1037-1045
    • Peng, H.1    Zhang, J.2
  • 15
    • 62349111195 scopus 로고    scopus 로고
    • Epigenetic regulation of stress responses in plants
    • Chinnusamy V., Zhu J.-kang Epigenetic regulation of stress responses in plants. Curr. Opin. Plant Biol. 2009, 12:133-139.
    • (2009) Curr. Opin. Plant Biol. , vol.12 , pp. 133-139
    • Chinnusamy, V.1    Zhu, J.-K.2
  • 18
    • 77955162098 scopus 로고    scopus 로고
    • Epigenetic differentiation and relationship to adaptive genetic divergence in discrete populations of the violet Viola cazorlensis
    • Herrera C.M., Bazaga P. Epigenetic differentiation and relationship to adaptive genetic divergence in discrete populations of the violet Viola cazorlensis. New Phytol. 2010, 187:867-876.
    • (2010) New Phytol. , vol.187 , pp. 867-876
    • Herrera, C.M.1    Bazaga, P.2
  • 19
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • Law J.A., Jacobsen S.E. Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat. Rev. Genet. 2010, 11:204-220.
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 20
    • 0029119776 scopus 로고
    • Allelic interactions heritably alter the activity of a metastable maize PZ allele
    • Hollick J.B., Patterson G.I., Coe E.H., Cone K.C., Chandler V.L. Allelic interactions heritably alter the activity of a metastable maize PZ allele. Genetics 1995, 141:709-719.
    • (1995) Genetics , vol.141 , pp. 709-719
    • Hollick, J.B.1    Patterson, G.I.2    Coe, E.H.3    Cone, K.C.4    Chandler, V.L.5
  • 21
    • 0030769859 scopus 로고    scopus 로고
    • Hypermethylated SUPERMAN epigenetic alleles in arabidopsis
    • Jacobsen S.E. Hypermethylated SUPERMAN epigenetic alleles in arabidopsis. Science 1997, 277:1100-1103.
    • (1997) Science , vol.277 , pp. 1100-1103
    • Jacobsen, S.E.1
  • 22
    • 0033637356 scopus 로고    scopus 로고
    • The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene
    • Soppe W.J., Jacobsen S.E., Alonso-Blanco C., Jackson J.P., Kakutani T., Koornneef M., et al. The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene. Mol. Cell 2000, 6:791-802.
    • (2000) Mol. Cell , vol.6 , pp. 791-802
    • Soppe, W.J.1    Jacobsen, S.E.2    Alonso-Blanco, C.3    Jackson, J.P.4    Kakutani, T.5    Koornneef, M.6
  • 23
    • 0037080492 scopus 로고    scopus 로고
    • Epigenetic variation in Arabidopsis disease resistance
    • Stokes T.L., Kunkel B.N., Richards E.J. Epigenetic variation in Arabidopsis disease resistance. Genes Dev. 2002, 171-182.
    • (2002) Genes Dev. , pp. 171-182
    • Stokes, T.L.1    Kunkel, B.N.2    Richards, E.J.3
  • 24
    • 33646193822 scopus 로고    scopus 로고
    • Inherited epigenetic variation - revisiting soft inheritance
    • Richards E.J. Inherited epigenetic variation - revisiting soft inheritance. Nat. Rev. Genet. 2006, 7:395-402.
    • (2006) Nat. Rev. Genet. , vol.7 , pp. 395-402
    • Richards, E.J.1
  • 26
    • 0004311016 scopus 로고
    • Harvard Univ. Press, Cambridge, Massachusetts; London, England
    • Mayr E. The Evolutionary Synthesis 1980, Harvard Univ. Press, Cambridge, Massachusetts; London, England.
    • (1980) The Evolutionary Synthesis
    • Mayr, E.1
  • 27
    • 77949533748 scopus 로고    scopus 로고
    • What role does heritable epigenetic variation play in phenotypic evolution?
    • Richards C.L., Bossdorf O., Pigliucci M. What role does heritable epigenetic variation play in phenotypic evolution?. Bioscience 2010, 60:232-237.
    • (2010) Bioscience , vol.60 , pp. 232-237
    • Richards, C.L.1    Bossdorf, O.2    Pigliucci, M.3
  • 29
    • 13444261413 scopus 로고    scopus 로고
    • Quantitative trait locus mapping in natural populations: progress, caveats and future directions
    • Slate J. Quantitative trait locus mapping in natural populations: progress, caveats and future directions. Mol. Ecol. 2005, 14:363-379.
    • (2005) Mol. Ecol. , vol.14 , pp. 363-379
    • Slate, J.1
  • 31
    • 77957142014 scopus 로고    scopus 로고
    • The population genomics of plant adaptation
    • Siol M., Wright S.I., Barrett S.C.H. The population genomics of plant adaptation. New Phytol. 2010, 313-332.
    • (2010) New Phytol. , pp. 313-332
    • Siol, M.1    Wright, S.I.2    Barrett, S.C.H.3
  • 32
    • 72049116572 scopus 로고    scopus 로고
    • Plant conservation genetics in a changing world
    • Kramer A.T., Havens K. Plant conservation genetics in a changing world. Trends Plant Sci. 2009, 14:599-607.
    • (2009) Trends Plant Sci. , vol.14 , pp. 599-607
    • Kramer, A.T.1    Havens, K.2
  • 35
    • 28444441250 scopus 로고    scopus 로고
    • Cold, salinity and drought stresses: an overview
    • Mahajan S., Tuteja N. Cold, salinity and drought stresses: an overview. Arch. Biochem. Biophys. 2005, 444:139-158.
    • (2005) Arch. Biochem. Biophys. , vol.444 , pp. 139-158
    • Mahajan, S.1    Tuteja, N.2
  • 36
    • 39049098653 scopus 로고    scopus 로고
    • Jones and Barlett Publishers
    • Lewin B. Genes IX 2007, Jones and Barlett Publishers.
    • (2007) Genes IX
    • Lewin, B.1
  • 38
    • 78049402859 scopus 로고    scopus 로고
    • Molecular signals of epigenetic states
    • Bonasio R., Tu S., Reinberg D. Molecular signals of epigenetic states. Science 2010, 330:612-616.
    • (2010) Science , vol.330 , pp. 612-616
    • Bonasio, R.1    Tu, S.2    Reinberg, D.3
  • 39
    • 77954946640 scopus 로고    scopus 로고
    • Epigenetic performers in plants
    • Chen M., Lv S., Meng Y. Epigenetic performers in plants. Dev. Growth Differ. 2010, 52:555-566.
    • (2010) Dev. Growth Differ. , vol.52 , pp. 555-566
    • Chen, M.1    Lv, S.2    Meng, Y.3
  • 40
    • 77952355762 scopus 로고    scopus 로고
    • Genome-wide evolutionary analysis of eucaryotic DNA methylation
    • Zemach A., McDaniel I.E., Silva P., Zilberman D. Genome-wide evolutionary analysis of eucaryotic DNA methylation. Science 2010, 328.
    • (2010) Science , vol.328
    • Zemach, A.1    McDaniel, I.E.2    Silva, P.3    Zilberman, D.4
  • 41
    • 34249798697 scopus 로고    scopus 로고
    • DNA methylation dynamics in plant genomes
    • Gehring M., Henikoff S. DNA methylation dynamics in plant genomes. Biochim. Biophys. Acta 2007, 1769:276-286.
    • (2007) Biochim. Biophys. Acta , vol.1769 , pp. 276-286
    • Gehring, M.1    Henikoff, S.2
  • 42
    • 2442479896 scopus 로고    scopus 로고
    • DNA and histone methylation in plants
    • Tariq M., Paszkowski J. DNA and histone methylation in plants. Trends Genet. 2004, 20.
    • (2004) Trends Genet. , vol.20
    • Tariq, M.1    Paszkowski, J.2
  • 43
    • 33845880624 scopus 로고    scopus 로고
    • Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
    • Zilberman D., Gehring M., Tran R.K., Ballinger T., Henikoff S. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nat. Genet. 2007, 39:61-69.
    • (2007) Nat. Genet. , vol.39 , pp. 61-69
    • Zilberman, D.1    Gehring, M.2    Tran, R.K.3    Ballinger, T.4    Henikoff, S.5
  • 44
    • 33748629119 scopus 로고    scopus 로고
    • Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis
    • Zhang X., Yazaki J., Sundaresan A., Cokus S., Chan S.W.-L., Chen H., et al. Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis. Cell 2006, 126:1189-1201.
    • (2006) Cell , vol.126 , pp. 1189-1201
    • Zhang, X.1    Yazaki, J.2    Sundaresan, A.3    Cokus, S.4    Chan, S.W.-L.5    Chen, H.6
  • 45
    • 34247399015 scopus 로고    scopus 로고
    • Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants
    • Choi C.-S., Sano H. Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants. Mol. Genet. Genomics 2007, 277:589-600.
    • (2007) Mol. Genet. Genomics , vol.277 , pp. 589-600
    • Choi, C.-S.1    Sano, H.2
  • 46
    • 34247107485 scopus 로고    scopus 로고
    • Transgenerational changes in the genome stability and methylation in pathogen-infected plants
    • Boyko A., Kathiria P., Zemp F.J., Yao Y., Pogribny I., Kovalchuk I. Transgenerational changes in the genome stability and methylation in pathogen-infected plants. Nucleic Acids Res. 2007, 35:1714-1725.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 1714-1725
    • Boyko, A.1    Kathiria, P.2    Zemp, F.J.3    Yao, Y.4    Pogribny, I.5    Kovalchuk, I.6
  • 48
    • 79955098368 scopus 로고    scopus 로고
    • Methylation and demethylation of the Arabidopsis genome
    • Furner I.J., Matzke M. Methylation and demethylation of the Arabidopsis genome. Curr. Opin. Plant Biol. 2011, 14:137-141.
    • (2011) Curr. Opin. Plant Biol. , vol.14 , pp. 137-141
    • Furner, I.J.1    Matzke, M.2
  • 49
    • 0030766180 scopus 로고    scopus 로고
    • Hypermethylation of tobacco heterochromatic loci in response to osmotic stress
    • Kovarik A., Koukalová B., Bezdek M., OpatrnD́ Z. Hypermethylation of tobacco heterochromatic loci in response to osmotic stress. Theor. Appl. Genet. 1997, 95:301-306.
    • (1997) Theor. Appl. Genet. , vol.95 , pp. 301-306
    • Kovarik, A.1    Koukalová, B.2    Bezdek, M.3    OpatrnD́, Z.4
  • 50
    • 33646171904 scopus 로고    scopus 로고
    • Effect of hypermethylation of CCWGG sequences in DNA of Mesembryanthemum crystallinum plants on their adaptation to salt stress
    • Dyachenko O.V., Zakharchenko N.S., Shevchuk T.V., Bohnert H.J., Cushman J.C., Buryanov Y.I. Effect of hypermethylation of CCWGG sequences in DNA of Mesembryanthemum crystallinum plants on their adaptation to salt stress. Biochemistry (Moscow) 2006, 71:461-465.
    • (2006) Biochemistry (Moscow) , vol.71 , pp. 461-465
    • Dyachenko, O.V.1    Zakharchenko, N.S.2    Shevchuk, T.V.3    Bohnert, H.J.4    Cushman, J.C.5    Buryanov, Y.I.6
  • 51
    • 33645735516 scopus 로고    scopus 로고
    • The temperature-dependent change in methylation of the Antirrhinum transposon Tam3 is controlled by the activity of its transposase
    • Hashida S.-nosuke, Uchiyama T., Martin C., Kishima Y., Sano Y., Mikami T. The temperature-dependent change in methylation of the Antirrhinum transposon Tam3 is controlled by the activity of its transposase. Plant Cell 2006, 18:104-118.
    • (2006) Plant Cell , vol.18 , pp. 104-118
    • Hashida, S.-N.1    Uchiyama, T.2    Martin, C.3    Kishima, Y.4    Sano, Y.5    Mikami, T.6
  • 53
    • 79953296447 scopus 로고    scopus 로고
    • Coordinated histone modifications are associated with gene expression variation within and between species
    • Ha M., Ng D., Li W.-H., Chen Z.J. Coordinated histone modifications are associated with gene expression variation within and between species. Genome Res. 2011, 590-598.
    • (2011) Genome Res. , pp. 590-598
    • Ha, M.1    Ng, D.2    Li, W.-H.3    Chen, Z.J.4
  • 54
    • 43249091345 scopus 로고    scopus 로고
    • Distinctive core histone post-translational modification patterns in Arabidopsis thaliana
    • Zhang K., Sridhar V.V., Zhu J., Kapoor A., Zhu J.-K. Distinctive core histone post-translational modification patterns in Arabidopsis thaliana. PLoS One 2007, 2:e1210.
    • (2007) PLoS One , vol.2
    • Zhang, K.1    Sridhar, V.V.2    Zhu, J.3    Kapoor, A.4    Zhu, J.-K.5
  • 55
    • 79953758929 scopus 로고    scopus 로고
    • The SUVR4 histone lysine methyltransferase binds ubiquitin and converts H3K9me1 to H3K9me3 on transposon chromatin in Arabidopsis
    • Veiseth S.V., a Rahman M., Yap K.L., Fischer A., Egge-Jacobsen W., Reuter G., et al. The SUVR4 histone lysine methyltransferase binds ubiquitin and converts H3K9me1 to H3K9me3 on transposon chromatin in Arabidopsis. PLoS Genet. 2011, 7:e1001325.
    • (2011) PLoS Genet. , vol.7
    • Veiseth, S.V.1    a Rahman, M.2    Yap, K.L.3    Fischer, A.4    Egge-Jacobsen, W.5    Reuter, G.6
  • 57
    • 70349880814 scopus 로고    scopus 로고
    • Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana
    • Kim J., To T., Ishida J., Morosawa T., Kawashima M., Matsui A., et al. Alterations of lysine modifications on the histone H3 N-tail under drought stress conditions in Arabidopsis thaliana. Plant Cell Physiol. 2009, 50:1856-1864.
    • (2009) Plant Cell Physiol. , vol.50 , pp. 1856-1864
    • Kim, J.1    To, T.2    Ishida, J.3    Morosawa, T.4    Kawashima, M.5    Matsui, A.6
  • 58
    • 78049400268 scopus 로고    scopus 로고
    • Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana
    • van Dijk K., Ding Y., Malkaram S., Riethoven J., Liu R., Yang J., et al. Dynamic changes in genome-wide histone H3 lysine 4 methylation patterns in response to dehydration stress in Arabidopsis thaliana. BMC Plant Biol. 2010, 10.
    • (2010) BMC Plant Biol. , vol.10
    • van Dijk, K.1    Ding, Y.2    Malkaram, S.3    Riethoven, J.4    Liu, R.5    Yang, J.6
  • 59
    • 0037648396 scopus 로고    scopus 로고
    • Maintenance of chromatin states: an open-and-shut case
    • Vermaak D. Maintenance of chromatin states: an open-and-shut case. Curr. Opin. Cell Biol. 2003, 15:266-274.
    • (2003) Curr. Opin. Cell Biol. , vol.15 , pp. 266-274
    • Vermaak, D.1
  • 60
    • 0035282573 scopus 로고    scopus 로고
    • Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins
    • Lachner M., O'Carroll D., Rea S., Mechtler K., Jenuwein T. Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins. Nature 2001, 410:116-120.
    • (2001) Nature , vol.410 , pp. 116-120
    • Lachner, M.1    O'Carroll, D.2    Rea, S.3    Mechtler, K.4    Jenuwein, T.5
  • 61
    • 0042528729 scopus 로고    scopus 로고
    • Heterochromatin and epigenetic control of gene expression
    • Grewal S.I.S., Moazed D. Heterochromatin and epigenetic control of gene expression. Science 2003, 301:798-802.
    • (2003) Science , vol.301 , pp. 798-802
    • Grewal, S.I.S.1    Moazed, D.2
  • 62
    • 0031707751 scopus 로고    scopus 로고
    • Alteration of nucleosome structure as a mechanism of transcriptional regulation
    • Workman J.L., Kingston R.E. Alteration of nucleosome structure as a mechanism of transcriptional regulation. Annu. Rev. Biochem. 1998, 67:545-579.
    • (1998) Annu. Rev. Biochem. , vol.67 , pp. 545-579
    • Workman, J.L.1    Kingston, R.E.2
  • 63
    • 36849067000 scopus 로고    scopus 로고
    • Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications
    • Sokol A., Kwiatkowska A., Jerzmanowski A., Prymakowska-Bosak M. Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications. Planta 2007, 227:245-254.
    • (2007) Planta , vol.227 , pp. 245-254
    • Sokol, A.1    Kwiatkowska, A.2    Jerzmanowski, A.3    Prymakowska-Bosak, M.4
  • 64
    • 46149085626 scopus 로고    scopus 로고
    • Small RNA metabolism in Arabidopsis
    • Ramachandran V., Chen X. Small RNA metabolism in Arabidopsis. Trends Plant Sci. 2008, 13:368-374.
    • (2008) Trends Plant Sci. , vol.13 , pp. 368-374
    • Ramachandran, V.1    Chen, X.2
  • 65
    • 61449126060 scopus 로고    scopus 로고
    • Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses
    • Ben Amor B., Wirth S., Merchan F., Laporte P., d' Aubenton-Carafa Y., Hirsch J., et al. Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses. Genome Res. 2009, 19:57-69.
    • (2009) Genome Res. , vol.19 , pp. 57-69
    • Ben Amor, B.1    Wirth, S.2    Merchan, F.3    Laporte, P.4    d' Aubenton-Carafa, Y.5    Hirsch, J.6
  • 66
    • 34447550259 scopus 로고    scopus 로고
    • The role of small RNAs in abiotic stress
    • Phillips J.R., Dalmay T., Bartels D. The role of small RNAs in abiotic stress. FEBS Lett. 2007, 581:3592-3597.
    • (2007) FEBS Lett. , vol.581 , pp. 3592-3597
    • Phillips, J.R.1    Dalmay, T.2    Bartels, D.3
  • 67
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: genomics, biogenesis, mechanism, and function genomics
    • Bartel D.P. MicroRNAs: genomics, biogenesis, mechanism, and function genomics. Cell 2004, 116:281-297.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 68
    • 29244490062 scopus 로고    scopus 로고
    • Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
    • Borsani O., Zhu J., Verslues P.E., Sunkar R., Zhu J.-K. Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis. Cell 2005, 123:1279-1291.
    • (2005) Cell , vol.123 , pp. 1279-1291
    • Borsani, O.1    Zhu, J.2    Verslues, P.E.3    Sunkar, R.4    Zhu, J.-K.5
  • 69
    • 34347263491 scopus 로고    scopus 로고
    • Small RNAs as big players in plant abiotic stress responses and nutrient deprivation
    • Sunkar R., Chinnusamy V., Zhu J., Zhu J.-K. Small RNAs as big players in plant abiotic stress responses and nutrient deprivation. Trends Plant Sci. 2007, 12:301-309.
    • (2007) Trends Plant Sci. , vol.12 , pp. 301-309
    • Sunkar, R.1    Chinnusamy, V.2    Zhu, J.3    Zhu, J.-K.4
  • 71
    • 33745271035 scopus 로고    scopus 로고
    • Functions of microRNAs and related small RNAs in plants
    • Mallory A.C., Vaucheret H. Functions of microRNAs and related small RNAs in plants. Nat. Genet. 2006, 38:S31-S36. Suppl.
    • (2006) Nat. Genet. , vol.38 , Issue.SUPPL.
    • Mallory, A.C.1    Vaucheret, H.2
  • 72
    • 60149088848 scopus 로고    scopus 로고
    • Origins and mechanisms of miRNAs and siRNAs
    • Carthew R.W., Sontheimer E.J. Origins and mechanisms of miRNAs and siRNAs. Cell 2009, 136:642-655.
    • (2009) Cell , vol.136 , pp. 642-655
    • Carthew, R.W.1    Sontheimer, E.J.2
  • 73
    • 77952884377 scopus 로고    scopus 로고
    • Profiling of cold-stress-responsive miRNAs in rice by microarrays
    • Lv D., Bai X., Li Y., Ding X., Ge Y., Cai H., et al. Profiling of cold-stress-responsive miRNAs in rice by microarrays. Gene 2010, 459:39-47.
    • (2010) Gene , vol.459 , pp. 39-47
    • Lv, D.1    Bai, X.2    Li, Y.3    Ding, X.4    Ge, Y.5    Cai, H.6
  • 74
    • 70350438585 scopus 로고    scopus 로고
    • Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response
    • Zhang J., Xu Y., Huan Q., Chong K. Deep sequencing of Brachypodium small RNAs at the global genome level identifies microRNAs involved in cold stress response. BMC Genomics 2009, 10:449.
    • (2009) BMC Genomics , vol.10 , pp. 449
    • Zhang, J.1    Xu, Y.2    Huan, Q.3    Chong, K.4
  • 75
    • 77950531313 scopus 로고    scopus 로고
    • Over-expression of osa-MIR396c decreases salt and alkali stress tolerance
    • Gao P., Bai X., Yang L., Lv D., Li Y., Cai H., et al. Over-expression of osa-MIR396c decreases salt and alkali stress tolerance. Planta 2010, 231:991-1001.
    • (2010) Planta , vol.231 , pp. 991-1001
    • Gao, P.1    Bai, X.2    Yang, L.3    Lv, D.4    Li, Y.5    Cai, H.6
  • 76
    • 77955498202 scopus 로고    scopus 로고
    • Diverse set of microRNAs are responsive to powdery mildew infection and heat stress in wheat (Triticum aestivum L.)
    • Xin M., Wang Y., Yao Y., Xie C., Peng H., Ni Z., et al. Diverse set of microRNAs are responsive to powdery mildew infection and heat stress in wheat (Triticum aestivum L.). BMC Plant Biol. 2010, 10:123.
    • (2010) BMC Plant Biol. , vol.10 , pp. 123
    • Xin, M.1    Wang, Y.2    Yao, Y.3    Xie, C.4    Peng, H.5    Ni, Z.6
  • 77
    • 79952042541 scopus 로고    scopus 로고
    • Small RNAs from MITE-derived stem-loop precursors regulate abscisic acid signaling and abiotic stress responses in rice
    • Yan Y., Zhang Y., Yang K., Sun Z., Fu Y., Chen X., et al. Small RNAs from MITE-derived stem-loop precursors regulate abscisic acid signaling and abiotic stress responses in rice. Plant J. 2011, 65:820-828.
    • (2011) Plant J. , vol.65 , pp. 820-828
    • Yan, Y.1    Zhang, Y.2    Yang, K.3    Sun, Z.4    Fu, Y.5    Chen, X.6
  • 78
    • 78349304997 scopus 로고    scopus 로고
    • Differential sensitivity of Arabidopsis siRNA biogenesis mutants to genotoxic stress
    • Yao Y., Bilichak A., Golubov A., Blevins T., Kovalchuk I. Differential sensitivity of Arabidopsis siRNA biogenesis mutants to genotoxic stress. Plant Cell Rep. 2010, 29:1401-1410.
    • (2010) Plant Cell Rep. , vol.29 , pp. 1401-1410
    • Yao, Y.1    Bilichak, A.2    Golubov, A.3    Blevins, T.4    Kovalchuk, I.5
  • 79
    • 77953193344 scopus 로고    scopus 로고
    • MiR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth
    • Marin E., Jouannet V., Herz A., Lokerse A.S., Weijers D., Vaucheret H., et al. miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth. Plant Cell 2010, 22:1104-1117.
    • (2010) Plant Cell , vol.22 , pp. 1104-1117
    • Marin, E.1    Jouannet, V.2    Herz, A.3    Lokerse, A.S.4    Weijers, D.5    Vaucheret, H.6
  • 80
    • 67650159718 scopus 로고    scopus 로고
    • Endogenous TasiRNAs mediate non-cell autonomous effects on gene regulation in Arabidopsis thaliana
    • Schwab R., Maizel A., Ruiz-Ferrer V., Garcia D., Bayer M., Crespi M., et al. Endogenous TasiRNAs mediate non-cell autonomous effects on gene regulation in Arabidopsis thaliana. PLoS One 2009, 4:e5980.
    • (2009) PLoS One , vol.4
    • Schwab, R.1    Maizel, A.2    Ruiz-Ferrer, V.3    Garcia, D.4    Bayer, M.5    Crespi, M.6
  • 81
    • 77949389564 scopus 로고    scopus 로고
    • Co-ordination of developmental processes by small RNAs during leaf development
    • Pulido A., Laufs P. Co-ordination of developmental processes by small RNAs during leaf development. J. Exp. Bot. 2010, 61:1277-1291.
    • (2010) J. Exp. Bot. , vol.61 , pp. 1277-1291
    • Pulido, A.1    Laufs, P.2
  • 83
    • 0037041422 scopus 로고    scopus 로고
    • Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase
    • Jackson J.P., Lindroth A.M., Cao X., Jacobsen S.E. Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature 2002, 416:556-560.
    • (2002) Nature , vol.416 , pp. 556-560
    • Jackson, J.P.1    Lindroth, A.M.2    Cao, X.3    Jacobsen, S.E.4
  • 84
    • 12244271065 scopus 로고    scopus 로고
    • An Arabidopsis SET domain protein required for maintenance but not establishment of DNA methylation
    • Malagnac F., Bartee L., Bender J. An Arabidopsis SET domain protein required for maintenance but not establishment of DNA methylation. EMBO J. 2002, 21:6842-6852.
    • (2002) EMBO J. , vol.21 , pp. 6842-6852
    • Malagnac, F.1    Bartee, L.2    Bender, J.3
  • 85
    • 65249186659 scopus 로고    scopus 로고
    • Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes
    • Reinders J., Wulff B.B.H., Mirouze M., Marí-Ordóñez A., Dapp M., Rozhon W., et al. Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes. Genes Dev. 2009, 23:939-950.
    • (2009) Genes Dev. , vol.23 , pp. 939-950
    • Reinders, J.1    Wulff, B.B.H.2    Mirouze, M.3    Marí-Ordóñez, A.4    Dapp, M.5    Rozhon, W.6
  • 86
    • 79957679448 scopus 로고    scopus 로고
    • Epigenetic contribution to stress adaptation in plants
    • Mirouze M., Paszkowski J. Epigenetic contribution to stress adaptation in plants. Curr. Opin. Plant Biol. 2011, 14:267-274.
    • (2011) Curr. Opin. Plant Biol. , vol.14 , pp. 267-274
    • Mirouze, M.1    Paszkowski, J.2
  • 87
    • 4243085624 scopus 로고    scopus 로고
    • Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification
    • Lippman Z., May B., Yordan C., Singer T., Martienssen R. Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification. PLoS Biol. 2003, 1.
    • (2003) PLoS Biol. , vol.1
    • Lippman, Z.1    May, B.2    Yordan, C.3    Singer, T.4    Martienssen, R.5
  • 88
    • 66449124318 scopus 로고    scopus 로고
    • Epigenetic regulation of transposable elements in plants
    • Lisch D. Epigenetic regulation of transposable elements in plants. Annu. Rev. Plant Biol. 2009, 60:43-66.
    • (2009) Annu. Rev. Plant Biol. , vol.60 , pp. 43-66
    • Lisch, D.1
  • 89
    • 41349114789 scopus 로고    scopus 로고
    • Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide
    • Mi S., Cai T., Hu Y., Chen Y., Hodges E., Ni F., et al. Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide. Cell 2008, 133:116-127.
    • (2008) Cell , vol.133 , pp. 116-127
    • Mi, S.1    Cai, T.2    Hu, Y.3    Chen, Y.4    Hodges, E.5    Ni, F.6
  • 90
    • 34248195475 scopus 로고    scopus 로고
    • The plant genome's methylation status and response to stress: implications for plant improvement
    • Lukens L.N., Zhan S. The plant genome's methylation status and response to stress: implications for plant improvement. Curr. Opin. Plant Biol. 2007, 10:317-322.
    • (2007) Curr. Opin. Plant Biol. , vol.10 , pp. 317-322
    • Lukens, L.N.1    Zhan, S.2
  • 91
    • 55049139974 scopus 로고    scopus 로고
    • The role of microRNAs and other endogenous small RNAs in plant stress responses
    • Shukla L.I., Chinnusamy V., Sunkar R. The role of microRNAs and other endogenous small RNAs in plant stress responses. Biochim. Biophys. Acta 2008, 1779:743-748.
    • (2008) Biochim. Biophys. Acta , vol.1779 , pp. 743-748
    • Shukla, L.I.1    Chinnusamy, V.2    Sunkar, R.3
  • 93
    • 33646111709 scopus 로고    scopus 로고
    • Effect of water deficits on the activity of anti-oxidative enzymes and osmoregulation among three different genotypes of Radix Astragali at seeding stage
    • Tan Y., Liang Z., Shao H., Du F. Effect of water deficits on the activity of anti-oxidative enzymes and osmoregulation among three different genotypes of Radix Astragali at seeding stage. Colloids Surf. B Biointerfaces 2006, 49:60-65.
    • (2006) Colloids Surf. B Biointerfaces , vol.49 , pp. 60-65
    • Tan, Y.1    Liang, Z.2    Shao, H.3    Du, F.4
  • 94
    • 1642441342 scopus 로고    scopus 로고
    • Molecular genetic perspectives on cross-talk and specificity in abiotic stress signalling in plants
    • Chinnusamy V., Schumaker K., Zhu J.-K. Molecular genetic perspectives on cross-talk and specificity in abiotic stress signalling in plants. J. Exp. Bot. 2004, 55:225-236.
    • (2004) J. Exp. Bot. , vol.55 , pp. 225-236
    • Chinnusamy, V.1    Schumaker, K.2    Zhu, J.-K.3
  • 95
    • 62349088361 scopus 로고    scopus 로고
    • Phenotypic instability and epigenetic variability in a diploid potato of hybrid origin, Solanum ruiz-lealii
    • Marfil C.F., Camadro E.L., Masuelli R.W. Phenotypic instability and epigenetic variability in a diploid potato of hybrid origin, Solanum ruiz-lealii. BMC Plant Biol. 2009, 9:21.
    • (2009) BMC Plant Biol. , vol.9 , pp. 21
    • Marfil, C.F.1    Camadro, E.L.2    Masuelli, R.W.3
  • 96
    • 79955122393 scopus 로고    scopus 로고
    • Natural epigenetic variation in plant species: a view from the field
    • Richards E.J. Natural epigenetic variation in plant species: a view from the field. Curr. Opin. Plant Biol. 2011.
    • (2011) Curr. Opin. Plant Biol.
    • Richards, E.J.1
  • 97
    • 79953778399 scopus 로고    scopus 로고
    • Untangling individual variation in natural populations: ecological, genetic and epigenetic correlates of long-term inequality in herbivory
    • Herrera C.M., Bazaga P. Untangling individual variation in natural populations: ecological, genetic and epigenetic correlates of long-term inequality in herbivory. Mol. Ecol. 2011, 20:1675-1688.
    • (2011) Mol. Ecol. , vol.20 , pp. 1675-1688
    • Herrera, C.M.1    Bazaga, P.2
  • 99
    • 77958587359 scopus 로고    scopus 로고
    • Genome-wide DNA methylation alterations of Alternanthera philoxeroides in natural and manipulated habitats: implications for epigenetic regulation of rapid responses to environmental fluctuation and phenotypic variation
    • Gao L., Geng Y., Li B., Chen J., Yang J. Genome-wide DNA methylation alterations of Alternanthera philoxeroides in natural and manipulated habitats: implications for epigenetic regulation of rapid responses to environmental fluctuation and phenotypic variation. Plant Cell Environ. 2010, 33:1820-1827.
    • (2010) Plant Cell Environ. , vol.33 , pp. 1820-1827
    • Gao, L.1    Geng, Y.2    Li, B.3    Chen, J.4    Yang, J.5
  • 100
    • 0033198981 scopus 로고    scopus 로고
    • DNA markers in plant improvement: an overview
    • Kumar L.S. DNA markers in plant improvement: an overview. Biotechnol. Adv. 1999, 17:143-182.
    • (1999) Biotechnol. Adv. , vol.17 , pp. 143-182
    • Kumar, L.S.1
  • 101
    • 79952258247 scopus 로고    scopus 로고
    • QTL analysis of seed germination and pre-emergence growth at extreme temperatures in Medicago truncatula
    • Dias P.M.B., Brunel-Muguet S., Dürr C., Huguet T., Demilly D., Wagner M.-H., et al. QTL analysis of seed germination and pre-emergence growth at extreme temperatures in Medicago truncatula. Theor. Appl. Genet. 2011, 122:429-444.
    • (2011) Theor. Appl. Genet. , vol.122 , pp. 429-444
    • Dias, P.M.B.1    Brunel-Muguet, S.2    Dürr, C.3    Huguet, T.4    Demilly, D.5    Wagner, M.-H.6
  • 102
    • 78650768337 scopus 로고    scopus 로고
    • Genic SNP markers and legume synteny reveal candidate genes underlying QTL for Macrophomina phaseolina resistance and maturity in cowpea [Vigna unguiculata (L) Walp.].
    • Muchero W., Ehlers J.D., Close T.J., Roberts P.A. Genic SNP markers and legume synteny reveal candidate genes underlying QTL for Macrophomina phaseolina resistance and maturity in cowpea [Vigna unguiculata (L) Walp.]. BMC Genomics 2011, 12:8.
    • (2011) BMC Genomics , vol.12 , pp. 8
    • Muchero, W.1    Ehlers, J.D.2    Close, T.J.3    Roberts, P.A.4
  • 103
    • 77956628415 scopus 로고    scopus 로고
    • Quantitative trait locus mapping of genes under selection across multiple years and sites in Avena barbata: epistasis, pleiotropy, and genotype by environment interactions.
    • Latta R.G., Gardner K.M., Staples D.A. Quantitative trait locus mapping of genes under selection across multiple years and sites in Avena barbata: epistasis, pleiotropy, and genotype by environment interactions. Genetics 2010, 385:375-385.
    • (2010) Genetics , vol.385 , pp. 375-385
    • Latta, R.G.1    Gardner, K.M.2    Staples, D.A.3
  • 105
    • 79953232012 scopus 로고    scopus 로고
    • Cold sensitivity in rice (Oryza sativa L.) is strongly correlated with a naturally occurring I99V mutation in the multifunctional glutathione transferase isoenzyme GSTZ2
    • Kim S.-I., Andaya V.C., Tai T.H. Cold sensitivity in rice (Oryza sativa L.) is strongly correlated with a naturally occurring I99V mutation in the multifunctional glutathione transferase isoenzyme GSTZ2. Biochem. J. 2011, 435:373-380.
    • (2011) Biochem. J. , vol.435 , pp. 373-380
    • Kim, S.-I.1    Andaya, V.C.2    Tai, T.H.3
  • 106
    • 34748889509 scopus 로고    scopus 로고
    • Molecular ecology of global change
    • Reusch T.B.H., Wood T.E. Molecular ecology of global change. Mol. Ecol. 2007, 16:3973-3992.
    • (2007) Mol. Ecol. , vol.16 , pp. 3973-3992
    • Reusch, T.B.H.1    Wood, T.E.2
  • 107
    • 33750992817 scopus 로고    scopus 로고
    • Microsatellite signature of ecological selection for salt tolerance in a wild sunflower hybrid species, Helianthus paradoxus
    • Edelist C., Lexer C., Dillmann C., Sicard D., Rieseberg L.H. Microsatellite signature of ecological selection for salt tolerance in a wild sunflower hybrid species, Helianthus paradoxus. Mol. Ecol. 2006, 15:4623-4634.
    • (2006) Mol. Ecol. , vol.15 , pp. 4623-4634
    • Edelist, C.1    Lexer, C.2    Dillmann, C.3    Sicard, D.4    Rieseberg, L.H.5
  • 109
    • 34548564136 scopus 로고    scopus 로고
    • Differential epigenetic regulation within an Arabidopsis retroposon family
    • Rangwala S.H., Richards E.J. Differential epigenetic regulation within an Arabidopsis retroposon family. Genetics 2007, 176:151-160.
    • (2007) Genetics , vol.176 , pp. 151-160
    • Rangwala, S.H.1    Richards, E.J.2
  • 110
    • 43249131622 scopus 로고    scopus 로고
    • Small RNA-directed epigenetic natural variation in Arabidopsis thaliana
    • Zhai J., Liu J., Liu B., Li P., Meyers B.C., Chen X., et al. Small RNA-directed epigenetic natural variation in Arabidopsis thaliana. PLoS Genet. 2008, 4:e1000056.
    • (2008) PLoS Genet. , vol.4
    • Zhai, J.1    Liu, J.2    Liu, B.3    Li, P.4    Meyers, B.C.5    Chen, X.6
  • 111
    • 77954916966 scopus 로고    scopus 로고
    • Inheritance of acquired traits in plants: reinstatement of Lamarck
    • Sano H. Inheritance of acquired traits in plants: reinstatement of Lamarck. Plant Signal. Behav. 2010, 5:346-348.
    • (2010) Plant Signal. Behav. , vol.5 , pp. 346-348
    • Sano, H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.