-
1
-
-
0031972059
-
Epigenetic inheritance in evolution
-
Jablonka E, Lamb M (1998) Epigenetic inheritance in evolution. J Evol Biol 11: 159-183.
-
(1998)
J Evol Biol
, vol.11
, pp. 159-183
-
-
Jablonka, E.1
Lamb, M.2
-
2
-
-
3042701155
-
Epigenomics: Beyond CpG islands
-
Fazzari M, Greally J (2004) Epigenomics: beyond CpG islands. Nat Rev Genet 5: 446-455.
-
(2004)
Nat Rev Genet
, vol.5
, pp. 446-455
-
-
Fazzari, M.1
Greally, J.2
-
3
-
-
85058724245
-
Epigenetics: Imprinting in plants and mammal the same but different?
-
Scott R, Spielman M (2006) Epigenetics: imprinting in plants and mammal the same but different? Curr Biol 14: R200-R203.
-
(2006)
Curr Biol
, vol.14
-
-
Scott, R.1
Spielman, M.2
-
4
-
-
17344392822
-
Plant epigenetics
-
Bender J (2000) Plant epigenetics. Curr Biol 12: R412-414.
-
(2000)
Curr Biol
, vol.12
-
-
Bender, J.1
-
5
-
-
29644435144
-
Epigenetics and plant evolution
-
Rapp R, Wendel J (2005) Epigenetics and plant evolution. New Phytol 168: 81-91.
-
(2005)
New Phytol
, vol.168
, pp. 81-91
-
-
Rapp, R.1
Wendel, J.2
-
6
-
-
70449341719
-
Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes
-
Parisod C, Salmon A, Tenaillon M, Zerjal T, Grandbastien MA, et al. (2009) Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes. New Phytol 183: 1003-1015.
-
(2009)
New Phytol
, vol.183
, pp. 1003-1015
-
-
Parisod, C.1
Salmon, A.2
Tenaillon, M.3
Zerjal, T.4
Grandbastien, M.A.5
-
7
-
-
34249798697
-
DNA methylation dynamics in plant genomes
-
Gehring M, Henikoff S (2007) DNA methylation dynamics in plant genomes. Biochim Biophys Acta 1769: 276-286.
-
(2007)
Biochim Biophys Acta
, vol.1769
, pp. 276-286
-
-
Gehring, M.1
Henikoff, S.2
-
8
-
-
0035810998
-
Protein-coding genes are epigenetically regulated in Arabidopsis polyploids
-
Lee HS, Chen ZJ (2001) Protein-coding genes are epigenetically regulated in Arabidopsis polyploids. Proc Natl Acad Sci U S A 98: 6753-6758.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 6753-6758
-
-
Lee, H.S.1
Chen, Z.J.2
-
9
-
-
2342635059
-
Genetic and epigenetic evaluations of citrus calluses recovered from slow-growth culture
-
Hao Y, Wen X, Deng X (2004) Genetic and epigenetic evaluations of citrus calluses recovered from slow-growth culture. J Plant Physiol 161: 479-484.
-
(2004)
J Plant Physiol
, vol.161
, pp. 479-484
-
-
Hao, Y.1
Wen, X.2
Deng, X.3
-
10
-
-
33745726564
-
RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in Arabidopsis
-
Chan SL, Henderson I, Zhang X, Shah G, Chien JC, et al. (2006) RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in Arabidopsis. PLoS Genet 2: 791-797.
-
(2006)
PLoS Genet
, vol.2
, pp. 791-797
-
-
Chan, S.L.1
Henderson, I.2
Zhang, X.3
Shah, G.4
Chien, J.C.5
-
11
-
-
33745561418
-
Endogenous targets of RNA-directed DNA methylation and pol IV in Arabidopsis
-
Huettel B, Kanno T, Daxinger L, Aufsatz W, Matzke A, et al. (2006) Endogenous targets of RNA-directed DNA methylation and pol IV in Arabidopsis. EMBO J 25: 2826-2836.
-
(2006)
EMBO J
, vol.25
, pp. 2826-2836
-
-
Huettel, B.1
Kanno, T.2
Daxinger, L.3
Aufsatz, W.4
Matzke, A.5
-
12
-
-
33748629119
-
Genome-wide high-resolution mapping and functional analysis of DNA methylation in Arabidopsis
-
Zhang X, Yazaki J, Sundaresan A, Cokus S, Chan S, et al. (2006) Genome-wide high-resolution mapping and functional analysis of DNA methylation in Arabidopsis. Cell 126: 1189-1201.
-
(2006)
Cell
, vol.126
, pp. 1189-1201
-
-
Zhang, X.1
Yazaki, J.2
Sundaresan, A.3
Cokus, S.4
Chan, S.5
-
13
-
-
42549085238
-
The epigenetic landscape of plants
-
Zhang X (2008) The epigenetic landscape of plants. Science 320: 489-492.
-
(2008)
Science
, vol.320
, pp. 489-492
-
-
Zhang, X.1
-
14
-
-
2942598781
-
Epialleles via DNA methylation: Consequences for plant evolution
-
Kalisz S, Purugganan M (2004) Epialleles via DNA methylation: consequences for plant evolution. Trends Ecol Evol 19: 309-314.
-
(2004)
Trends Ecol Evol
, vol.19
, pp. 309-314
-
-
Kalisz, S.1
Purugganan, M.2
-
16
-
-
33646885228
-
Arabidopsis displays centromeric DNA hypomethylation and cytological alterations of heterochro-matin upon attack by Pseudomonas syringae
-
Pavet V, Quintero C, Cecchini N, Rosa A, Alvarez M (2006) Arabidopsis displays centromeric DNA hypomethylation and cytological alterations of heterochro-matin upon attack by Pseudomonas syringae. Mol Plant Microbe Interact 19: 577-587.
-
(2006)
Mol Plant Microbe Interact
, vol.19
, pp. 577-587
-
-
Pavet, V.1
Quintero, C.2
Cecchini, N.3
Rosa, A.4
Alvarez, M.5
-
17
-
-
34248195475
-
The plant genomes methylation status and response to stress: Implications for plant improvement
-
Lukens L, Zhan S (2007) The plant genomes methylation status and response to stress: implications for plant improvement. Curr Opin Plant Biol 10: 317- 322.
-
(2007)
Curr Opin Plant Biol
, vol.10
, pp. 317-322
-
-
Lukens, L.1
Zhan, S.2
-
19
-
-
33646792917
-
Paleoenvironment interpretation of a 1760 years b.p. old sediment in a mangrove area of the bay of Guanabara, using pollen analysis
-
Barth O, So-Tihago L, Barros M (2006) Paleoenvironment interpretation of a 1760 years b.p. old sediment in a mangrove area of the bay of Guanabara, using pollen analysis. An Acad Bras Cienc 78: 227-229.
-
(2006)
An Acad Bras Cienc
, vol.78
, pp. 227-229
-
-
Barth, O.1
So-Tihago, L.2
Barros, M.3
-
22
-
-
0033005346
-
Patterns of cytosine methylation in an elite rice hybrid and its parental lines, detected by a methylation-sensitive amplification polymorphism technique
-
Xiong L, Xu C, Saghai-Maroof M, Zhang Q (1999) Patterns of cytosine methylation in an elite rice hybrid and its parental lines, detected by a methylation-sensitive amplification polymorphism technique. Mol Genet Genomics 261: 439-446.
-
(1999)
Mol Genet Genomics
, vol.261
, pp. 439-446
-
-
Xiong, L.1
Xu, C.2
Saghai-Maroof, M.3
Zhang, Q.4
-
23
-
-
0036456019
-
Analysis of DNA methylation in Arabidopsis thaliana based on methylation-sensitive AFLP markers
-
Cervera M, Ruiz-Garca L, Martnez-Zapater J (2002) Analysis of DNA methylation in Arabidopsis thaliana based on methylation-sensitive AFLP markers. Mol Genet Genomics 268: 543-552.
-
(2002)
Mol Genet Genomics
, vol.268
, pp. 543-552
-
-
Cervera, M.1
Ruiz-Garca, L.2
Martnez-Zapater, J.3
-
24
-
-
39449088572
-
Genome-wide approaches to studying chromatin modifications
-
Schones D, Zhao K (2008) Genome-wide approaches to studying chromatin modifications. Nat Rev Genet 9: 179-191.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 179-191
-
-
Schones, D.1
Zhao, K.2
-
25
-
-
48849104642
-
Variation in DNA methylation patterns of grapevine somaclones (Vitis vinifera L.)
-
Schellenbaum P, Mohler V, Wenzel G, Walter B (2008) Variation in DNA methylation patterns of grapevine somaclones (Vitis vinifera L.). BMC Plant Biol 8: 78-87.
-
(2008)
BMC Plant Biol
, vol.8
, pp. 78-87
-
-
Schellenbaum, P.1
Mohler, V.2
Wenzel, G.3
Walter, B.4
-
26
-
-
1942520183
-
Search for methylation-sensitive amplification polymorphisms associated with the mantled variant phenotype in oil palm (Elaeis guineensis Jacq)
-
Jaligot E, Beul T, Baurens F, Billotte N, Rival A (2004) Search for methylation-sensitive amplification polymorphisms associated with the mantled variant phenotype in oil palm (Elaeis guineensis Jacq). Genome 47: 224-228.
-
(2004)
Genome
, vol.47
, pp. 224-228
-
-
Jaligot, E.1
Beul, T.2
Baurens, F.3
Billotte, N.4
Rival, A.5
-
27
-
-
16344367626
-
Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae)
-
Salmon A, Ainouche M, Wendel J (2005) Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae). Mol Ecol 14: 1163-1175.
-
(2005)
Mol Ecol
, vol.14
, pp. 1163-1175
-
-
Salmon, A.1
Ainouche, M.2
Wendel, J.3
-
28
-
-
15744372592
-
DNA methylation polymorphisms in rice and wild rice strains: Detection of epigenetic markers
-
Takata M, Kishima Y, Sano Y (2005) DNA methylation polymorphisms in rice and wild rice strains: detection of epigenetic markers. Breed Sci 55: 57-63.
-
(2005)
Breed Sci
, vol.55
, pp. 57-63
-
-
Takata, M.1
Kishima, Y.2
Sano, Y.3
-
29
-
-
34248145207
-
Infraspecific DNA methylation polymorphism in cotton (Gossypium hirsutum L.)
-
Keyte A, Percifield R, Liu B, Wendel J (2006) Infraspecific DNA methylation polymorphism in cotton (Gossypium hirsutum L.). J Hered 97: 444-450.
-
(2006)
J Hered
, vol.97
, pp. 444-450
-
-
Keyte, A.1
Percifield, R.2
Liu, B.3
Wendel, J.4
-
30
-
-
34047168659
-
Epigenetic inheritance and variation of DNA methylation level and pattern in maize intra-specific hybrids
-
Zhao X, Chai Y, Liu B (2007) Epigenetic inheritance and variation of DNA methylation level and pattern in maize intra-specific hybrids. Plant Sci 172: 930-938.
-
(2007)
Plant Sci
, vol.172
, pp. 930-938
-
-
Zhao, X.1
Chai, Y.2
Liu, B.3
-
31
-
-
77950959077
-
Impact of transposable elements on the organization and function of allopolyploid genomes
-
in press
-
Parisod C, Alix K, Just J, Petit M, Sarilar V, et al. (2010) Impact of transposable elements on the organization and function of allopolyploid genomes. New Phytol, in press.
-
(2010)
New Phytol
-
-
Parisod, C.1
Alix, K.2
Just, J.3
Petit, M.4
Sarilar, V.5
-
32
-
-
36148957919
-
Brassica oleracea displays a high level of DNA methylation polymorphism
-
Salmon A, Clotault J, Jenczewski E, Chable V, Manzanares-Dauleux M (2008) Brassica oleracea displays a high level of DNA methylation polymorphism. Plant Sci 174: 61-70.
-
(2008)
Plant Sci
, vol.174
, pp. 61-70
-
-
Salmon, A.1
Clotault, J.2
Jenczewski, E.3
Chable, V.4
Manzanares-Dauleux, M.5
-
33
-
-
0034901448
-
Detection of DNA methylation changes in micropropagated banana plants using methylation-sensitive amplification polymorphism (MSAP)
-
Peraza-Echeverria S, Herrera-Valencia V, Kay A (2001) Detection of DNA methylation changes in micropropagated banana plants using methylation-sensitive amplification polymorphism (MSAP). Plant Sci 161: 359-367.
-
(2001)
Plant Sci
, vol.161
, pp. 359-367
-
-
Peraza-Echeverria, S.1
Herrera-Valencia, V.2
Kay, A.3
-
35
-
-
0031545391
-
LAI and leaf size differences in two red mangrove forest types in south Florida
-
Araújo R, Jaramillo J, Snedaker S (1997) LAI and leaf size differences in two red mangrove forest types in south Florida. Bull Mar Sci 60: 643-647.
-
(1997)
Bull Mar Sci
, vol.60
, pp. 643-647
-
-
Araújo, R.1
Jaramillo, J.2
Snedaker, S.3
-
36
-
-
12544254467
-
DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes
-
Tran R, Henikoff J, Zilberman D, Ditt R, Jacobsen S, et al. (2005) DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes. Curr Biol 15: 154-159.
-
(2005)
Curr Biol
, vol.15
, pp. 154-159
-
-
Tran, R.1
Henikoff, J.2
Zilberman, D.3
Ditt, R.4
Jacobsen, S.5
-
37
-
-
0036810094
-
Epi-alleles in plants: Inheritance of epigenetic information over generations
-
Kakutani T (2002) Epi-alleles in plants: Inheritance of epigenetic information over generations. Plant Cell Physiol 43: 1106-1111.
-
(2002)
Plant Cell Physiol
, vol.43
, pp. 1106-1111
-
-
Kakutani, T.1
-
38
-
-
62349111195
-
Epigenetic regulation of stress responses in plants
-
Chinnusamy V, Zhu JK (2009) Epigenetic regulation of stress responses in plants. Curr Opin Plant Biol 12: 133-139.
-
(2009)
Curr Opin Plant Biol
, vol.12
, pp. 133-139
-
-
Chinnusamy, V.1
Zhu, J.K.2
-
39
-
-
62349088361
-
Phenotypic instability and epigenetic variability in a diploid potato of hybrid origin, Solanum ruiz-lealii
-
Marfil C, Camadro E, Masuelli R (2009) Phenotypic instability and epigenetic variability in a diploid potato of hybrid origin, Solanum ruiz-lealii. BMC Plant Biol 9: 21-37.
-
(2009)
BMC Plant Biol
, vol.9
, pp. 21-37
-
-
Marfil, C.1
Camadro, E.2
Masuelli, R.3
-
40
-
-
0033824241
-
Plant DNA methyltransferases
-
Finnegan E, Kovac K (2000) Plant DNA methyltransferases. Plant Mol Biol 43: 189-201.
-
(2000)
Plant Mol Biol
, vol.43
, pp. 189-201
-
-
Finnegan, E.1
Kovac, K.2
-
41
-
-
0030857543
-
DNA methylation and plant development
-
Richards E (1997) DNA methylation and plant development. Trends Genet 13: 319-323.
-
(1997)
Trends Genet
, vol.13
, pp. 319-323
-
-
Richards, E.1
-
42
-
-
29144499987
-
Epigenetics and its implications for plant biology 2. The epigenetic epiphany: Epigenetics, evolution and beyond
-
Grant-Downton R, Dickinson H (2006) Epigenetics and its implications for plant biology 2. The epigenetic epiphany: Epigenetics, evolution and beyond. Ann Bot 97: 11-27.
-
(2006)
Ann Bot
, vol.97
, pp. 11-27
-
-
Grant-Downton, R.1
Dickinson, H.2
-
43
-
-
26044457918
-
A multivariate study of mangrove morphology (Rhizophora mangle) using both above and below-water plant architecture
-
Brooks R, Bell S (2005) A multivariate study of mangrove morphology (Rhizophora mangle) using both above and below-water plant architecture. Estuar Coast Shelf Sci 65: 440-448.
-
(2005)
Estuar Coast Shelf Sci
, vol.65
, pp. 440-448
-
-
Brooks, R.1
Bell, S.2
-
44
-
-
77956412353
-
-
R Foundation for Statistical Computing, Vienna, Austria R version 2.6.0
-
R Foundation for Statistical Computing, Vienna, Austria R version 2.6.0. URL http://www.R-project.org.
-
-
-
-
45
-
-
0031744869
-
High genetic differentiation among remnant populations of the endangered Caesalpinia echinata Lam
-
Leguminosae Caesalpinioideae
-
Cardoso M, Provan J, Powell W, Ferreira P, de Oliveira D (1998) High genetic differentiation among remnant populations of the endangered Caesalpinia echinata Lam. (Leguminosae Caesalpinioideae). Mol Ecol 7: 601-608.
-
(1998)
Mol Ecol
, vol.7
, pp. 601-608
-
-
Cardoso, M.1
Provan, J.2
Powell, W.3
Ferreira, P.4
de Oliveira, D.5
-
46
-
-
0028834605
-
AFLP: A new technique for DNA fingerprinting
-
Vos P, Hogers R, Bleeker M, Reijans M, Van de Lee T, et al. (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23: 4407-4414.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 4407-4414
-
-
Vos, P.1
Hogers, R.2
Bleeker, M.3
Reijans, M.4
van de Lee, T.5
-
47
-
-
7044264955
-
How to track and assess genotyping errors in population genetics studies
-
Bonin A, Bellemain E, Broken Eidesen P, Pompanon F, Brochmann C, et al. (2004) How to track and assess genotyping errors in population genetics studies. Mol Ecol 13: 3261-3273.
-
(2004)
Mol Ecol
, vol.13
, pp. 3261-3273
-
-
Bonin, A.1
Bellemain, E.2
Broken, E.P.3
Pompanon, F.4
Brochmann, C.5
-
48
-
-
34548570134
-
Statistical analysis of amplified fragment length polymorphism data: A toolbox for molecular ecologists and evolutionists
-
Bonin A, Ehrich D, Manel S (2007) Statistical analysis of amplified fragment length polymorphism data: a toolbox for molecular ecologists and evolutionists. Mol Ecol 16: 3737-3758.
-
(2007)
Mol Ecol
, vol.16
, pp. 3737-3758
-
-
Bonin, A.1
Ehrich, D.2
Manel, S.3
-
49
-
-
41149179541
-
Genome-wide association to fine-scale ecological heterogeneity within a continuous population of Biscutella laevigata (Brassicaceae)
-
Parisod C, Christin PA (2008) Genome-wide association to fine-scale ecological heterogeneity within a continuous population of Biscutella laevigata (Brassicaceae). New Phytol 178: 436-447.
-
(2008)
New Phytol
, vol.178
, pp. 436-447
-
-
Parisod, C.1
Christin, P.A.2
-
50
-
-
0033061722
-
The distribution of random amplified polymorphic DNA (RAPD) diversity amongst populations of Isotoma petraea (Lobeliaceae)
-
Bussel J (1999) The distribution of random amplified polymorphic DNA (RAPD) diversity amongst populations of Isotoma petraea (Lobeliaceae). Mol Ecol 8: 775-789.
-
(1999)
Mol Ecol
, vol.8
, pp. 775-789
-
-
Bussel, J.1
-
51
-
-
0000625869
-
Analyzing tables of statistical tests
-
Rice W (1989) Analyzing tables of statistical tests. Evol 43: 223-225.
-
(1989)
Evol
, vol.43
, pp. 223-225
-
-
Rice, W.1
-
53
-
-
65049091436
-
Hybridization, polyploidy and invasion: Lessons from Spartina (Poaceae)
-
Ainouche M, Fortune P, Salmon A, Parisod C, Grandbastien MA, et al. (2009) Hybridization, polyploidy and invasion: Lessons from Spartina (Poaceae). Biol Invasions 11: 1159-1173.
-
(2009)
Biol Invasions
, vol.11
, pp. 1159-1173
-
-
Ainouche, M.1
Fortune, P.2
Salmon, A.3
Parisod, C.4
Grandbastien, M.A.5
-
54
-
-
84977421344
-
Co-inertia analysis: An alternative method for studying species-environment relationships
-
Doldec S, Chessel D (1994) Co-inertia analysis: an alternative method for studying species-environment relationships. Freshw Biol 31: 277-294.
-
(1994)
Freshw Biol
, vol.31
, pp. 277-294
-
-
Doldec, S.1
Chessel, D.2
-
55
-
-
0035983456
-
A bayesian approach to inferring population structure from dominant markers
-
Holsinger K, Lewis P, Dey D (2002) A bayesian approach to inferring population structure from dominant markers. Mol Ecol 11: 1157-1164.
-
(2002)
Mol Ecol
, vol.11
, pp. 1157-1164
-
-
Holsinger, K.1
Lewis, P.2
Dey, D.3
-
56
-
-
36048938355
-
Do inbreeding depression and relative male fitness explain the maintenance of androdioecy in white mangrove, Laguncularia racemosa (Combretaceae)?
-
Landry C, Rathcke B (2007) Do inbreeding depression and relative male fitness explain the maintenance of androdioecy in white mangrove, Laguncularia racemosa (Combretaceae)? New Phytol 176: 891-901.
-
(2007)
New Phytol
, vol.176
, pp. 891-901
-
-
Landry, C.1
Rathcke, B.2
|