메뉴 건너뛰기




Volumn 12, Issue 1, 2012, Pages 40-48

Targeting cancer using fragment based drug discovery

Author keywords

Cancer; Drug discovery; Fragment screening; Ligand efficiency

Indexed keywords

1 CYCLOPROPYL 3 [3 (5 MORPHOLINOMETHYL 1H BENZIMIDAZOL 2 YL) 1H PYRAZOL 4 YL]UREA; 4 [4 (4' CHLORO 2 BIPHENYLYLMETHYL) 1 PIPERAZINYL] N [4 [3 DIMETHYLAMINO 1 (PHENYLTHIOMETHYL)PROPYLAMINO] 3 NITROBENZENESULFONYL]BENZAMIDE; AURORA KINASE INHIBITOR; CYCLIN DEPENDENT KINASE 1; CYCLIN DEPENDENT KINASE 2; CYCLIN DEPENDENT KINASE 4; CYCLIN DEPENDENT KINASE 5; ENZYME INHIBITOR; HEAT SHOCK PROTEIN 90; JANUS KINASE 2; JANUS KINASE 2 INHIBITOR; MEXILETINE; NAVITOCLAX; PEPTIDYLPROLYL ISOMERASE PIN1; PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE 1; PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE 1 INHIBITOR; PLX 4720; PROTEIN BCL 2; PROTEIN KINASE B; SAR 011797; UNCLASSIFIED DRUG; VEMURAFENIB;

EID: 84855282457     PISSN: 18715206     EISSN: 18755992     Source Type: Journal    
DOI: 10.2174/187152012798764660     Document Type: Article
Times cited : (6)

References (67)
  • 3
    • 77955982439 scopus 로고    scopus 로고
    • Structural biology in fragment-based drug design
    • Murray, C.W.; Blundell, T.L. Structural biology in fragment-based drug design. Curr. Opin. Struct. Biol., 2010, 20, 497-507.
    • (2010) Curr. Opin. Struct. Biol. , vol.20 , pp. 497-507
    • Murray, C.W.1    Blundell, T.L.2
  • 4
    • 77952546241 scopus 로고    scopus 로고
    • Drugging challenging targets using fragment-based approaches
    • Coyne, A.G.; Scott, D.E.; Abell, C. Drugging challenging targets using fragment-based approaches. Curr. Opin. Chem. Biol., 2010, 14, 299-307.
    • (2010) Curr. Opin. Chem. Biol. , vol.14 , pp. 299-307
    • Coyne, A.G.1    Scott, D.E.2    Abell, C.3
  • 5
    • 70349425790 scopus 로고    scopus 로고
    • Recent progress in fragment-based lead discovery
    • Schulz, M.N.; Hubbard, R.E. Recent progress in fragment-based lead discovery. Curr Opin Pharmacol., 2009 9, 615-621.
    • (2009) Curr Opin Pharmacol , vol.9 , pp. 615-621
    • Schulz, M.N.1    Hubbard, R.E.2
  • 6
    • 16244388286 scopus 로고    scopus 로고
    • Virtual exploration of the small-molecule chemical universe below 160 daltons
    • Fink, T.; Bruggesser, H.; Reymond, J.L. Virtual exploration of the small-molecule chemical universe below 160 daltons. Angew. Chem., Int. Ed., 2005, 44, 1504-1508.
    • (2005) Angew. Chem., Int. Ed. , vol.44 , pp. 1504-1508
    • Fink, T.1    Bruggesser, H.2    Reymond, J.L.3
  • 7
    • 0030039619 scopus 로고    scopus 로고
    • The art and practice of structure-based drug design: A molecular modeling perspective
    • Bohacek, R.S.; McMartin, C.; Guida, W.C. The art and practice of structure-based drug design: a molecular modeling perspective. Med. Res. Rev., 1996, 16, 3-50.
    • (1996) Med. Res. Rev. , vol.16 , pp. 3-50
    • Bohacek, R.S.1    McMartin, C.2    Guida, W.C.3
  • 8
    • 1942453243 scopus 로고    scopus 로고
    • Ligand efficiency: A useful metric for lead selection
    • Hopkins, A.L.; Groom, C.R.; Alex, A. Ligand efficiency: a useful metric for lead selection. Drug Discov. Today, 2004, 9, 430-431.
    • (2004) Drug Discov. Today. , vol.9 , pp. 430-431
    • Hopkins, A.L.1    Groom, C.R.2    Alex, A.3
  • 11
    • 0035324944 scopus 로고    scopus 로고
    • Molecular Complexity and Its Impact on the Probability of Finding Leads for Drug Discovery
    • Hann, M.M.; Leach, A.R.; Harper, G. Molecular Complexity and Its Impact on the Probability of Finding Leads for Drug Discovery. J. Chem. Inf. Model., 2001, 41, 856-864.
    • (2001) J. Chem. Inf. Model. , vol.41 , pp. 856-864
    • Hann, M.M.1    Leach, A.R.2    Harper, G.3
  • 12
    • 0037256186 scopus 로고    scopus 로고
    • Design of small molecule libraries for NMR screening and other applications in drug discovery
    • Jacoby, E.; Davies, J.; Blommers, M.J. Design of small molecule libraries for NMR screening and other applications in drug discovery. Curr. Top. Med. Chem., 2003, 3, 11-23.
    • (2003) Curr. Top. Med. Chem. , vol.3 , pp. 11-23
    • Jacoby, E.1    Davies, J.2    Blommers, M.J.3
  • 13
    • 34249094150 scopus 로고    scopus 로고
    • Informatics and modelling challenges in fragment-based drug discovery
    • Hubbard, R.E.; Chen, I.; Davis, B. Informatics and modelling challenges in fragment-based drug discovery. Curr. Opin. Drug Discov. Dev., 2007, 10, 289-297.
    • (2007) Curr. Opin. Drug Discov. Dev. , vol.10 , pp. 289-297
    • Hubbard, R.E.1    Chen, I.2    Davis, B.3
  • 14
    • 36549033318 scopus 로고    scopus 로고
    • Integration of fragment screening and library design
    • Siegal, G.; Ab, E.; Schultz, J. Integration of fragment screening and library design. Drug Discov. Today, 2007, 12, 1032-1039.
    • (2007) Drug Discov. Today. , vol.12 , pp. 1032-1039
    • Siegal, G.1    Ab, E.2    Schultz, J.3
  • 15
    • 78650754832 scopus 로고    scopus 로고
    • Fragment Library Design: Efficiently Hunting Drugs in Chemical Space
    • doi:10.1016
    • Boyd, S. M.; de Kloe, G. E. Fragment Library Design: Efficiently Hunting Drugs in Chemical Space, Drug Discov. Today: Technologies, 2010, 7(3), 173-180; doi:10.1016
    • (2010) Drug Discov. Today: Technologies. , vol.7 , Issue.3 , pp. 173-180
    • Boyd, S.M.1    de Kloe, G.E.2
  • 16
  • 17
    • 61649114657 scopus 로고    scopus 로고
    • Kinase-targeted libraries: The design and synthesis of novel, potent, and selective kinase inhibitors
    • Akritopoulou-Zanze, I.; Hajduk, P.J. Kinase-targeted libraries: the design and synthesis of novel, potent, and selective kinase inhibitors. Drug Discov. Today, 2009, 14, 291-297
    • (2009) Drug Discov. Today. , vol.14 , pp. 291-297
    • Akritopoulou-Zanze, I.1    Hajduk, P.J.2
  • 18
    • 57549115967 scopus 로고    scopus 로고
    • Identification and selection of "privileged fragments" suitable for primary screening
    • Gianti, E.; Sartori, L. Identification and selection of "privileged fragments" suitable for primary screening. J. Chem. Inform. Model, 2008, 48, 2129-2139.
    • (2008) J. Chem. Inform. Model. , vol.48 , pp. 2129-2139
    • Gianti, E.1    Sartori, L.2
  • 20
    • 79955686355 scopus 로고    scopus 로고
    • Weak affinity chromatography as a new approach for fragment screening in drug discovery
    • Duong-Thi, M-D.; Meiby, E.; Bergström, M.; Fex, T.; Isaksson, R.; Ohlson, S. Weak affinity chromatography as a new approach for fragment screening in drug discovery. Anal Biochem., 2011, 414, 138-146.
    • (2011) Anal Biochem , vol.414 , pp. 138-146
    • Duong-Thi, M.-D.1    Meiby, E.2    Bergström, M.3    Fex, T.4    Isaksson, R.5    Ohlson, S.6
  • 22
    • 33749659675 scopus 로고    scopus 로고
    • SAR by NMR: Putting the pieces together
    • Hajduk, P.J. SAR by NMR: putting the pieces together. Mol. Interv., 2006, 6, 266-272.
    • (2006) Mol. Interv. , vol.6 , pp. 266-272
    • Hajduk, P.J.1
  • 23
    • 84969396119 scopus 로고    scopus 로고
    • NMR-based screening: A powerful tool in fragment-based drug discovery
    • Klages, J.; Coles, M.; Kessler, H. NMR-based screening: a powerful tool in fragment-based drug discovery. Mol. Biosyst., 2006, 2, 319-331.
    • (2006) Mol. Biosyst. , vol.2 , pp. 319-331
    • Klages, J.1    Coles, M.2    Kessler, H.3
  • 24
    • 0033553844 scopus 로고    scopus 로고
    • Characterization of ligand binding by saturation transfer difference NMR spectroscopy
    • Mayer, M.; Meyer, B. Characterization of ligand binding by saturation transfer difference NMR spectroscopy. Angew. Chem. Int. Ed., 1999, 38, 1784-1788.
    • (1999) Angew. Chem. Int. Ed. , vol.38 , pp. 1784-1788
    • Mayer, M.1    Meyer, B.2
  • 25
    • 0033789206 scopus 로고    scopus 로고
    • Identification of compounds with binding affinity to proteins via magnetization transfer from bulk water
    • Dalvit, C.; Pevarello, P.; Tatò, M.; Veronesi, M.; Vulpetti, A.; Sundström, M. Identification of compounds with binding affinity to proteins via magnetization transfer from bulk water. J. Biomol. NMR, 2000, 18, 65-68.
    • (2000) J. Biomol. NMR. , vol.18 , pp. 65-68
    • Dalvit, C.1    Pevarello, P.2    Tatò, M.3    Veronesi, M.4    Vulpetti, A.5    Sundström, M.6
  • 28
    • 33845890639 scopus 로고    scopus 로고
    • It's a GPCR world
    • Filmore, D. It's a GPCR world. Modern Drug Discov., 2004, 7, 24-28.
    • (2004) Modern Drug Discov , vol.7 , pp. 24-28
    • Filmore, D.1
  • 29
    • 77956515615 scopus 로고    scopus 로고
    • Labeled ligand displacement: Extending NMR-based screening of protein targets
    • Swann, S.L.; Song, D.; Sun, C.; Hajduk, P.J.; Petros, A.M. Labeled ligand displacement: extending NMR-based screening of protein targets. ACS Med. Chem. Lett., 2010, 1, 295-299.
    • (2010) ACS Med. Chem. Lett. , vol.1 , pp. 295-299
    • Swann, S.L.1    Song, D.2    Sun, C.3    Hajduk, P.J.4    Petros, A.M.5
  • 30
    • 0036558207 scopus 로고    scopus 로고
    • Structure-based screening of low-affinity compounds
    • Carr, R.; Jhoti, H. Structure-based screening of low-affinity compounds. Drug Discov. Today, 2002, 7, 522-527.
    • (2002) Drug Discov. Today. , vol.7 , pp. 522-527
    • Carr, R.1    Jhoti, H.2
  • 31
    • 0026848170 scopus 로고
    • In search of new lead compounds for trypanosomiasis drug design: A protein structure- based linked-fragments approach
    • Verlinde, C.L.M.J.; Rudenko, G.; Hol, W.G.J.; In search of new lead compounds for trypanosomiasis drug design: a protein structure- based linked-fragments approach. J. Comput. Aided Mol. Des., 1992, 6, 131-147.
    • (1992) J. Comput. Aided Mol. Des. , vol.6 , pp. 131-147
    • Verlinde, C.L.M.J.1    Rudenko, G.2    Hol, W.G.J.3
  • 32
    • 0001928830 scopus 로고    scopus 로고
    • Anti-trypanosomiasis drug development based on structures of glycolytic enzymes
    • In, Ed. Veerapandian. Marcel Dekker, NY
    • Verlinde, C.L.M.J.; Kim, H.; Bernstein, B.E.; Mande, S.C.; Hol, W.G.J.; Anti-trypanosomiasis drug development based on structures of glycolytic enzymes. In 'Structure-based drug design', Ed. Veerapandian. Marcel Dekker, NY, 1997, 365-394.
    • (1997) Structure-based Drug Design , pp. 365-394
    • Verlinde, C.L.M.J.1    Kim, H.2    Bernstein, B.E.3    Mande, S.C.4    Hol, W.G.J.5
  • 33
    • 40549086568 scopus 로고    scopus 로고
    • Automated technologies and novel techniques to accelerate protein crystallography for structural genomics
    • Manjasetty, B.A.; Turnbull, A.P.; Panjikar, S.; Büssow, K.; Chance, M.R. Automated technologies and novel techniques to accelerate protein crystallography for structural genomics. Proteomics, 2008, 8, 612-625.
    • (2008) Proteomics , vol.8 , pp. 612-625
    • Manjasetty, B.A.1    Turnbull, A.P.2    Panjikar, S.3    Büssow, K.4    Chance, M.R.5
  • 39
    • 4143121255 scopus 로고    scopus 로고
    • Evaluation of fluorescence-based thermal shift assays for hit identification in drug discovery
    • Lo, M.C.; Aulabaugh, A.; Jin, G.; Cowling, R.; Bard, J.; Malamas, M.; Ellestad, G. Evaluation of fluorescence-based thermal shift assays for hit identification in drug discovery. Anal. Biochem. 2004, 332, 153-159.
    • (2004) Anal. Biochem. , vol.332 , pp. 153-159
    • Lo, M.C.1    Aulabaugh, A.2    Jin, G.3    Cowling, R.4    Bard, J.5    Malamas, M.6    Ellestad, G.7
  • 40
    • 33749850046 scopus 로고    scopus 로고
    • Universal Screening Methods and Applications of ThermoFluor®
    • Cummings, M.D.; Farnum, M.A.; Nelen, M.I. Universal Screening Methods and Applications of ThermoFluor®. J. Biomol. Screen., 2006, 11, 854-863
    • (2006) J. Biomol. Screen. , vol.11 , pp. 854-863
    • Cummings, M.D.1    Farnum, M.A.2    Nelen, M.I.3
  • 43
    • 0034646370 scopus 로고    scopus 로고
    • Combinatorial target-guided ligand assembly: Identification of potent subtype-selective s-Src inhibitors
    • Maly D.J.; Choong I.C.; Ellman J.A. Combinatorial target-guided ligand assembly: identification of potent subtype-selective s-Src inhibitors. PNAS, 2009, 7, 2419-2424.
    • (2009) PNAS , vol.7 , pp. 2419-2424
    • Maly, D.J.1    Choong, I.C.2    Ellman, J.A.3
  • 54
    • 42449142359 scopus 로고    scopus 로고
    • Fragment approaches in structure-based drug discovery
    • Hubbard, R.E. Fragment approaches in structure-based drug discovery. J. Synchrotron Rad., 2008, 15, 227-230.
    • (2008) J. Synchrotron Rad. , vol.15 , pp. 227-230
    • Hubbard, R.E.1
  • 62
    • 84855292486 scopus 로고    scopus 로고
    • Plexxikon Inc. Press Releases, Accessed May 16
    • Plexxikon Inc. Press Releases. http://www.plexxikon.com/view.cfm/86/Press-Releases (Accessed May 16, 2011).
    • (2011)


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.