-
1
-
-
0031663369
-
-
10.1146/annurev.biochem.67.1.509
-
R. Y. Tsien, Annu. Rev. Biochem. 67, 509 (1998). 10.1146/annurev.biochem. 67.1.509
-
(1998)
Annu. Rev. Biochem.
, vol.67
, pp. 509
-
-
Tsien, R.Y.1
-
2
-
-
0036489443
-
-
10.1021/cr010142r
-
M. Zimmer, Chem. Rev. 102 (3), 759 (2002). 10.1021/cr010142r
-
(2002)
Chem. Rev.
, vol.102
, Issue.3
, pp. 759
-
-
Zimmer, M.1
-
3
-
-
23444431611
-
-
10.1126/science.8303295
-
M. Chalfie, Y. Tu, G. Euskirchen, W. W. Ward, and D. C. Prasher, Science 263 (5148), 802 (1994). 10.1126/science.8303295
-
(1994)
Science
, vol.263
, Issue.5148
, pp. 802
-
-
Chalfie, M.1
Tu, Y.2
Euskirchen, G.3
Ward, W.W.4
Prasher, D.C.5
-
4
-
-
39749178375
-
-
10.1093/protein/gzm075
-
A. Goulding, S. Shrestha, K. Dria, E. Hunt, and S. K. Deo, Protein Eng. Des. Sel. 21 (2), 101 (2008). 10.1093/protein/gzm075
-
(2008)
Protein Eng. Des. Sel.
, vol.21
, Issue.2
, pp. 101
-
-
Goulding, A.1
Shrestha, S.2
Dria, K.3
Hunt, E.4
Deo, S.K.5
-
5
-
-
0032867477
-
-
10.1038/13657
-
M. V. Matz, A. F. Fradkov, Y. A. Labas, A. P. Savitsky, A. G. Zaraisky, M. L. Markelov, and S. A. Lukyanov, Nat. Biotechnol. 17 (10), 969 (1999). 10.1038/13657
-
(1999)
Nat. Biotechnol.
, vol.17
, Issue.10
, pp. 969
-
-
Matz, M.V.1
Fradkov, A.F.2
Labas, Y.A.3
Savitsky, A.P.4
Zaraisky, A.G.5
Markelov, M.L.6
Lukyanov, S.A.7
-
6
-
-
0035895225
-
-
10.1073/pnas.98.2.462
-
D. Yarbrough, R. M. Wachter, K. Kallio, M. V. Matz, and S. J. Remington, Proc. Natl. Acad. Sci. U.S.A. 98 (2), 462 (2001). 10.1073/pnas.98.2.462
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, Issue.2
, pp. 462
-
-
Yarbrough, D.1
Wachter, R.M.2
Kallio, K.3
Matz, M.V.4
Remington, S.J.5
-
7
-
-
0037062424
-
-
10.1073/pnas.082243699
-
R. E. Campbell, O. Tour, A. E. Palmer, P. A. Steinbach, G. S. Baird, D. A. Zacharias, and R. Y. Tsien, Proc. Natl. Acad. Sci. U.S.A. 99 (12), 7877 (2002). 10.1073/pnas.082243699
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, Issue.12
, pp. 7877
-
-
Campbell, R.E.1
Tour, O.2
Palmer, A.E.3
Steinbach, P.A.4
Baird, G.S.5
Zacharias, D.A.6
Tsien, R.Y.7
-
8
-
-
0034710920
-
-
10.1073/pnas.97.22.11984
-
G. S. Baird, D. A. Zacharias, and R. Y. Tsien, Proc. Natl. Acad. Sci. U.S.A. 97 (22), 11984 (2000). 10.1073/pnas.97.22.11984
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, Issue.22
, pp. 11984
-
-
Baird, G.S.1
Zacharias, D.A.2
Tsien, R.Y.3
-
9
-
-
34547659144
-
-
10.1038/nmeth1062
-
E. M. Merzlyak, J. Goedhart, D. Shcherbo, M. E. Bulina, A. S. Shcheglov, A. F. Fradkov, A. Gaintzeva, K. A. Lukyanov, S. Lukyanov, T. W. Gadella, and D. M. Chudakov, Nat. Methods 4 (7), 555 (2007). 10.1038/nmeth1062
-
(2007)
Nat. Methods
, vol.4
, Issue.7
, pp. 555
-
-
Merzlyak, E.M.1
Goedhart, J.2
Shcherbo, D.3
Bulina, M.E.4
Shcheglov, A.S.5
Fradkov, A.F.6
Gaintzeva, A.7
Lukyanov, K.A.8
Lukyanov, S.9
Gadella, T.W.10
Chudakov, D.M.11
-
10
-
-
11144267737
-
-
10.1038/nbt1037
-
N. C. Shaner, R. E. Campbell, P. A. Steinbach, B. N. Giepmans, A. E. Palmer, and R. Y. Tsien, Nat. Biotechnol. 22 (12), 1567 (2004). 10.1038/nbt1037
-
(2004)
Nat. Biotechnol.
, vol.22
, Issue.12
, pp. 1567
-
-
Shaner, N.C.1
Campbell, R.E.2
Steinbach, P.A.3
Giepmans, B.N.4
Palmer, A.E.5
Tsien, R.Y.6
-
11
-
-
30944467113
-
-
10.1038/nmeth819
-
N. C. Shaner, P. A. Steinbach, and R. Y. Tsien, Nat. Methods 2 (12), 905 (2005). 10.1038/nmeth819
-
(2005)
Nat. Methods
, vol.2
, Issue.12
, pp. 905
-
-
Shaner, N.C.1
Steinbach, P.A.2
Tsien, R.Y.3
-
12
-
-
44449109239
-
-
10.1038/nmeth.1209
-
N. C. Shaner, M. Z. Lin, M. R. McKeown, P. A. Steinbach, K. L. Hazelwood, M. W. Davidson, and R. Y. Tsien, Nat. Methods 5 (6), 545 (2008). 10.1038/nmeth.1209
-
(2008)
Nat. Methods
, vol.5
, Issue.6
, pp. 545
-
-
Shaner, N.C.1
Lin, M.Z.2
McKeown, M.R.3
Steinbach, P.A.4
Hazelwood, K.L.5
Davidson, M.W.6
Tsien, R.Y.7
-
13
-
-
0034813458
-
-
10.1110/ps.14201
-
P. Amara, P. Andreoletti, H. M. Jouve, and M. J. Field, Protein Sci. 10 (10), 1927 (2001). 10.1110/ps.14201
-
(2001)
Protein Sci.
, vol.10
, Issue.10
, pp. 1927
-
-
Amara, P.1
Andreoletti, P.2
Jouve, H.M.3
Field, M.J.4
-
14
-
-
0030031593
-
-
10.1021/bi951767k
-
M. L. Carlson, R. M. Regan, and Q. H. Gibson, Biochemistry 35 (4), 1125 (1996). 10.1021/bi951767k
-
(1996)
Biochemistry
, vol.35
, Issue.4
, pp. 1125
-
-
Carlson, M.L.1
Regan, R.M.2
Gibson, Q.H.3
-
15
-
-
2942655520
-
-
10.1529/biophysj.103.037432
-
C. Bossa, M. Anselmi, D. Roccatano, A. Amadei, B. Vallone, M. Brunori, and A. Di Nola, Biophys. J. 86 (6), 3855 (2004). 10.1529/biophysj.103.037432
-
(2004)
Biophys. J.
, vol.86
, Issue.6
, pp. 3855
-
-
Bossa, C.1
Anselmi, M.2
Roccatano, D.3
Amadei, A.4
Vallone, B.5
Brunori, M.6
Di Nola, A.7
-
16
-
-
1642619052
-
-
10.1016/j.bpc.2003.10.002
-
D. C. Lamb, A. Arcovito, K. Nienhaus, O. Minkow, F. Draghi, M. Brunori, and G. U. Nienhaus, Biophys. Chem. 109 (1), 41 (2004). 10.1016/j.bpc.2003.10.002
-
(2004)
Biophys. Chem.
, vol.109
, Issue.1
, pp. 41
-
-
Lamb, D.C.1
Arcovito, A.2
Nienhaus, K.3
Minkow, O.4
Draghi, F.5
Brunori, M.6
Nienhaus, G.U.7
-
17
-
-
0026526264
-
-
Q. H. Gibson, R. Regan, R. Elber, J. S. Olson, and T. E. Carver, J. Biol. Chem. 267 (31), 22022 (1992).
-
(1992)
J. Biol. Chem.
, vol.267
, Issue.31
, pp. 22022
-
-
Gibson, Q.H.1
Regan, R.2
Elber, R.3
Olson, J.S.4
Carver, T.E.5
-
18
-
-
0034867130
-
-
10.1093/embo-reports/kve159
-
M. Brunori and Q. H. Gibson, EMBO Rep. 2 (8), 674 (2001). 10.1093/embo-reports/kve159
-
(2001)
EMBO Rep.
, vol.2
, Issue.8
, pp. 674
-
-
Brunori, M.1
Gibson, Q.H.2
-
19
-
-
24344440880
-
-
10.1016/j.str.2005.05.013
-
J. Cohen, K. Kim, P. King, M. Seibert, and K. Schulten, Structure 13 (9), 1321 (2005). 10.1016/j.str.2005.05.013
-
(2005)
Structure
, vol.13
, Issue.9
, pp. 1321
-
-
Cohen, J.1
Kim, K.2
King, P.3
Seibert, M.4
Schulten, K.5
-
21
-
-
0015895751
-
-
10.1021/bi00745a021
-
J. R. Lakowicz and G. Weber, Biochemistry 12 (21), 4171 (1973). 10.1021/bi00745a021
-
(1973)
Biochemistry
, vol.12
, Issue.21
, pp. 4171
-
-
Lakowicz, J.R.1
Weber, G.2
-
23
-
-
0021114712
-
-
10.1021/bi00276a002
-
D. B. Calhoun, J. M. Vanderkooi, G. V. Woodrow III, and S. W. Englander, Biochemistry 22 (7), 1526 (1983). 10.1021/bi00276a002
-
(1983)
Biochemistry
, vol.22
, Issue.7
, pp. 1526
-
-
Calhoun, D.B.1
Vanderkooi, J.M.2
Woodrow III, G.V.3
Englander, S.W.4
-
24
-
-
0032515404
-
-
10.1021/ja973019j
-
B. R. Branchini, A. R. Nemser, and M. Zimmer, J. Am. Chem. Soc. 120 (1), 1 (1998). 10.1021/ja973019j
-
(1998)
J. Am. Chem. Soc.
, vol.120
, Issue.1
, pp. 1
-
-
Branchini, B.R.1
Nemser, A.R.2
Zimmer, M.3
-
25
-
-
33747479549
-
-
10.1021/bi060773l
-
X. Shu, N. C. Shaner, C. A. Yarbrough, R. Y. Tsien, and S. J. Remington, Biochemistry 45 (32), 9639 (2006). 10.1021/bi060773l
-
(2006)
Biochemistry
, vol.45
, Issue.32
, pp. 9639
-
-
Shu, X.1
Shaner, N.C.2
Yarbrough, C.A.3
Tsien, R.Y.4
Remington, S.J.5
-
26
-
-
0042852135
-
-
10.1006/jcph.1999.6218
-
R. G. Justin, B. Rosemary, and S. Klaus, J. Comput. Phys. 151 (1), 190 (1999). 10.1006/jcph.1999.6218
-
(1999)
J. Comput. Phys.
, vol.151
, Issue.1
, pp. 190
-
-
Justin, R.G.1
Rosemary, B.2
Klaus, S.3
-
27
-
-
0029633155
-
-
10.1016/0010-4655(95)00053-I
-
B. Roux, Comp. Phys. Commun. 91 (1-3), 275 (1995). 10.1016/0010-4655(95) 00053-I
-
(1995)
Comp. Phys. Commun.
, vol.91
, Issue.13
, pp. 275
-
-
Roux, B.1
-
28
-
-
33748460871
-
-
10.1529/biophysj.106.085746
-
J. Cohen, A. Arkhipov, R. Braun, and K. Schulten, Biophys. J. 91 (5), 1844 (2006). 10.1529/biophysj.106.085746
-
(2006)
Biophys. J.
, vol.91
, Issue.5
, pp. 1844
-
-
Cohen, J.1
Arkhipov, A.2
Braun, R.3
Schulten, K.4
-
29
-
-
33847313314
-
-
10.1016/j.jsb.2006.11.008
-
Y. Wang, J. Cohen, W. F. Boron, K. Schulten, and E. Tajkhorshid, J. Struct. Biol. 157 (3), 534 (2007); 10.1016/j.jsb.2006.11.008
-
(2007)
J. Struct. Biol.
, vol.157
, Issue.3
, pp. 534
-
-
Wang, Y.1
Cohen, J.2
Boron, W.F.3
Schulten, K.4
Tajkhorshid, E.5
-
30
-
-
34547101240
-
-
10.1074/jbc.M701308200
-
B. J. Johnson, J. Cohen, R. W. Welford, A. R. Pearson, K. Schulten, J. P. Klinman, and C. M. Wilmot, J. Biol. Chem. 282 (24), 17767 (2007). 10.1074/jbc.M701308200
-
(2007)
J. Biol. Chem.
, vol.282
, Issue.24
, pp. 17767
-
-
Johnson, B.J.1
Cohen, J.2
Welford, R.W.3
Pearson, A.R.4
Schulten, K.5
Klinman, J.P.6
Wilmot, C.M.7
-
31
-
-
34548060346
-
-
10.1073/pnas.0702401104
-
J. Saam, I. Ivanov, M. Walther, H. G. Holzhutter, and H. Kuhn, Proc. Natl. Acad. Sci. U.S.A. 104 (33), 13319 (2007). 10.1073/pnas.0702401104
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, Issue.33
, pp. 13319
-
-
Saam, J.1
Ivanov, I.2
Walther, M.3
Holzhutter, H.G.4
Kuhn, H.5
-
32
-
-
77955288875
-
-
10.1074/jbc.M110.131193
-
J. Saam, E. Rosini, G. Molla, K. Schulten, L. Pollegioni, and S. Ghisla, J. Biol. Chem. 285 (32), 24439 (2010). 10.1074/jbc.M110.131193
-
(2010)
J. Biol. Chem.
, vol.285
, Issue.32
, pp. 24439
-
-
Saam, J.1
Rosini, E.2
Molla, G.3
Schulten, K.4
Pollegioni, L.5
Ghisla, S.6
-
33
-
-
67649819680
-
-
10.1073/pnas.0903809106
-
R. Baron, C. Riley, P. Chenprakhon, K. Thotsaporn, R. T. Winter, A. Alfieri, F. Forneris, W. J. van Berkel, P. Chaiyen, M. W. Fraaije, A. Mattevi, and J. A. McCammon, Proc. Natl. Acad. Sci. U.S.A. 106 (26), 10603 (2009). 10.1073/pnas.0903809106
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, Issue.26
, pp. 10603
-
-
Baron, R.1
Riley, C.2
Chenprakhon, P.3
Thotsaporn, K.4
Winter, R.T.5
Alfieri, A.6
Forneris, F.7
Van Berkel, W.J.8
Chaiyen, P.9
Fraaije, M.W.10
Mattevi, A.11
McCammon, J.A.12
-
34
-
-
67651226892
-
-
10.1021/ja902557r
-
Y. Fan, L. Lund, Q. Shao, Y. Q. Gao, and F. M. Raushel, J. Am. Chem. Soc. 131 (29), 10211 (2009). 10.1021/ja902557r
-
(2009)
J. Am. Chem. Soc.
, vol.131
, Issue.29
, pp. 10211
-
-
Fan, Y.1
Lund, L.2
Shao, Q.3
Gao, Y.Q.4
Raushel, F.M.5
-
35
-
-
77949865832
-
-
10.1021/ja910441v
-
L. Lund, Y. Fan, Q. Shao, Y. Q. Gao, and F. M. Raushel, J. Am. Chem. Soc. 132 (11), 3870 (2010). 10.1021/ja910441v
-
(2010)
J. Am. Chem. Soc.
, vol.132
, Issue.11
, pp. 3870
-
-
Lund, L.1
Fan, Y.2
Shao, Q.3
Gao, Y.Q.4
Raushel, F.M.5
-
36
-
-
73149092075
-
-
10.1021/bi901521d
-
X. S. Wang, A. E. Roitberg, and N. G. Richards, Biochemistry 48 (51), 12272 (2009). 10.1021/bi901521d
-
(2009)
Biochemistry
, vol.48
, Issue.51
, pp. 12272
-
-
Wang, X.S.1
Roitberg, A.E.2
Richards, N.G.3
-
37
-
-
66149112165
-
-
10.1002/prot.22283
-
R. Daigle, M. Guertin, and P. Lague, Proteins 75 (3), 735 (2009). 10.1002/prot.22283
-
(2009)
Proteins
, vol.75
, Issue.3
, pp. 735
-
-
Daigle, R.1
Guertin, M.2
Lague, P.3
-
38
-
-
0035800773
-
-
10.1074/jbc.M102815200
-
O. Griesbeck, G. S. Baird, R. E. Campbell, D. A. Zacharias, and R. Y. Tsien, J. Biol. Chem. 276 (31), 29188 (2001). 10.1074/jbc.M102815200
-
(2001)
J. Biol. Chem.
, vol.276
, Issue.31
, pp. 29188
-
-
Griesbeck, O.1
Baird, G.S.2
Campbell, R.E.3
Zacharias, D.A.4
Tsien, R.Y.5
-
40
-
-
0034604399
-
-
10.1006/jmbi.2000.3905
-
R. M. Wachter, D. Yarbrough, K. Kallio, and S. J. Remington, J. Mol. Biol. 301 (1), 157 (2000). 10.1006/jmbi.2000.3905
-
(2000)
J. Mol. Biol.
, vol.301
, Issue.1
, pp. 157
-
-
Wachter, R.M.1
Yarbrough, D.2
Kallio, K.3
Remington, S.J.4
-
41
-
-
0037184962
-
-
10.1074/jbc.M209524200
-
A. Rekas, J. R. Alattia, T. Nagai, A. Miyawaki, and M. Ikura, J. Biol. Chem. 277 (52), 50573 (2002). 10.1074/jbc.M209524200
-
(2002)
J. Biol. Chem.
, vol.277
, Issue.52
, pp. 50573
-
-
Rekas, A.1
Alattia, J.R.2
Nagai, T.3
Miyawaki, A.4
Ikura, M.5
-
42
-
-
70349318573
-
-
10.1039/b903641p
-
T. D. Craggs, Chem. Soc. Rev. 38 (10), 2865 (2009). 10.1039/b903641p
-
(2009)
Chem. Soc. Rev.
, vol.38
, Issue.10
, pp. 2865
-
-
Craggs, T.D.1
-
43
-
-
33749247635
-
-
10.1038/sj.embor.7400787
-
A. G. Evdokimov, M. E. Pokross, N. S. Egorov, A. G. Zaraisky, I. V. Yampolsky, E. M. Merzlyak, A. N. Shkoporov, I. Sander, K. A. Lukyanov, and D. M. Chudakov, EMBO Rep. 7 (10), 1006 (2006). 10.1038/sj.embor.7400787
-
(2006)
EMBO Rep.
, vol.7
, Issue.10
, pp. 1006
-
-
Evdokimov, A.G.1
Pokross, M.E.2
Egorov, N.S.3
Zaraisky, A.G.4
Yampolsky, I.V.5
Merzlyak, E.M.6
Shkoporov, A.N.7
Sander, I.8
Lukyanov, K.A.9
Chudakov, D.M.10
-
44
-
-
84986512474
-
-
10.1002/jcc.540040211
-
B. R. Brooks, R. E. Bruccoleri, B. D. Olafson, D. J. States, S. Swaminathan, and M. Karplus, J. Comp. Chem. 4 (2), 187 (1983). 10.1002/jcc.540040211
-
(1983)
J. Comp. Chem.
, vol.4
, Issue.2
, pp. 187
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
45
-
-
38049034590
-
-
10.1110/ps.062095806
-
N. Eswar, B. Webb, M. A. Marti-Renom, M. S. Madhusudhan, D. Eramian, M. Y. Shen, U. Pieper, and A. Sali, Curr. Protoc. Bioinf. 15, 5.6-1 (2006). 10.1110/ps.062095806
-
(2006)
Curr. Protoc. Bioinf.
, vol.15
, pp. 56-1
-
-
Eswar, N.1
Webb, B.2
Marti-Renom, M.A.3
Madhusudhan, M.S.4
Eramian, D.5
Shen, M.Y.6
Pieper, U.7
Sali, A.8
-
46
-
-
50449096951
-
-
10.1073/pnas.0804039105
-
B. T. Andrews, S. Gosavi, J. M. Finke, J. N. Onuchic, and P. A. Jennings, Proc. Natl. Acad. Sci. U.S.A. 105 (34), 12283 (2008). 10.1073/pnas.0804039105
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, Issue.34
, pp. 12283
-
-
Andrews, B.T.1
Gosavi, S.2
Finke, J.M.3
Onuchic, J.N.4
Jennings, P.A.5
-
47
-
-
1942423619
-
-
10.1016/j.jmgm.2003.12.005
-
M. Feig, J. Karanicolas, and C. L. Brooks 3rd, J. Mol. Graphics Modell. 22 (5), 377 (2004). 10.1016/j.jmgm.2003.12.005
-
(2004)
J. Mol. Graphics Modell.
, vol.22
, Issue.5
, pp. 377
-
-
Feig, M.1
Karanicolas, J.2
Brooks III, C.L.3
-
48
-
-
33645961739
-
-
10.1063/1.470117
-
E. Ulrich, P. Lalith, L. B. Max, D. Tom, L. Hsing, and G. P. Lee, J. Chem. Phys. 103 (19), 8577 (1995). 10.1063/1.470117
-
(1995)
J. Chem. Phys.
, vol.103
, Issue.19
, pp. 8577
-
-
Ulrich, E.1
Lalith, P.2
Max, L.B.3
Tom, D.4
Hsing, L.5
Lee, G.P.6
-
50
-
-
0029878720
-
-
10.1016/0263-7855(96)00018-5
-
W. Humphrey, A. Dalke, and K. Schulten, J. Mol. Graphics 14 (1), 33 (1996). 10.1016/0263-7855(96)00018-5
-
(1996)
J. Mol. Graphics
, vol.14
, Issue.1
, pp. 33
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
|