Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications

Journal of Biological Chemistry

Volumn 276, Issue 31, 2001, Pages 29188-29194

  Griesbeck, Oliver ^a   Baird, Geoffrey S ^a,b   Campbell, Robert E ^b   Zacharias, David A ^a   Tsien, Roger Y ^a,b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b San Diego   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMISTRY; CELLS; CHEMICAL BONDS; CHLORINE; CHROMOPHORES; CRYSTAL STRUCTURE; ESCHERICHIA COLI; FLUORESCENCE; MUTAGENESIS; PH; PHYSIOLOGY;

CHIMERAS; PHOTOSTABILITY;

PROTEINS;

CALCIUM; CALMODULIN; CALMODULIN BINDING PROTEIN; CHLORIDE; CITRINE; HALIDE; METHIONINE; UNCLASSIFIED DRUG; YELLOW FLUORESCENT PROTEIN; BACTERIAL PROTEIN; CITRINE PROTEIN, BACTERIA; FLUORESCENT DYE; PHOTOPROTEIN; RECOMBINANT PROTEIN; YELLOW FLUORESCENT PROTEIN, BACTERIA;

ARTICLE; CELL ORGANELLE; CELLULAR DISTRIBUTION; CHIMERA; CHROMATOPHORE; CRYSTAL STRUCTURE; ESCHERICHIA COLI; GOLGI COMPLEX; HUMAN; HUMAN CELL; IMAGING; PH; PKA; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN INTERACTION; SIGNAL TRANSDUCTION; AMINO ACID SUBSTITUTION; BINDING SITE; CHEMICAL STRUCTURE; CHEMISTRY; GENETIC TRANSFECTION; GENETICS; HELA CELL; METABOLISM; MOLECULAR CLONING; PHOTOLYSIS; POLYMERASE CHAIN REACTION; PROTEIN CONFORMATION; RADIATION EXPOSURE; SITE DIRECTED MUTAGENESIS; X RAY CRYSTALLOGRAPHY;

ESCHERICHIA COLI; INSERTION SEQUENCES;

AMINO ACID SUBSTITUTION; BACTERIAL PROTEINS; BINDING SITES; CALCIUM; CALMODULIN; CHLORIDES; CLONING, MOLECULAR; CRYSTALLOGRAPHY, X-RAY; ESCHERICHIA COLI; FLUORESCENT DYES; GOLGI APPARATUS; HELA CELLS; HUMANS; HYDROGEN-ION CONCENTRATION; LUMINESCENT PROTEINS; MODELS, MOLECULAR; MUTAGENESIS, SITE-DIRECTED; PHOTOLYSIS; POLYMERASE CHAIN REACTION; PROTEIN CONFORMATION; RECOMBINANT PROTEINS; TRANSFECTION;

EID: 0035800773     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M102815200     Document Type: Article

References (51)

1. Ormö, M., Cubitt, A. B., Kallio, K., Gross, L. A., Tsien, R. Y., and Remington, S. J. (1996) Science 273, 1392-1395
2. Tsien, R. Y. (1995) Annu. Rev. Biochem. 67, 509-544
3. Wachter, R. M., Elsliger, M.-A., Kallio, K., Hanson, G. T., and Remington, S. J. (1998) Structure 6, 1267-1277
4. Dickson, R. M., Cubitt, A. B., Tsien, R. Y., and Moerner, W. E. (1997) Nature 388, 355-358
5. Miyawaki, A., and Tsien, R. Y. (2000) Methods Enzymol. 327, 472-500
6. Llopis, J., McCaffery, J. M., Miyawaki, A., Farquhar, M. G., and Tsien, R. Y. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 6803-6808
7. Matsuyama, S., Llopis, J., Deveraux, Q. L., Tsien, R. Y., and Reed, J. C. (2000) Nat. Cell Biol. 2, 318-325
8. Miyawaki, A., Griesbeck, O., Heim, R., and Tsien, R. Y. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 2135-2140
9. Elsliger, M.-A., Wachter, R. M., Hanson, G. T., Kallio, K., and Remington, S. J. (1999) Biochemistry 38, 5296-5301
10. Wachter, R. M., Yarbrough, D., Kallio, K., and Remington, S. J. (2000) J. Mol. Biol. 301, 157-171
11. Wachter, R. M., and Remington, S. J. (1999) Curr. Biol. 9, R628-R629
12. Jayaraman, S., Haggie, P., Wachter, R. M., Remington, S. J., and Verkman, A. S. (2000) J. Biol. Chem. 275, 6047-6050
13. Tsien, R. Y., and Miyawaki, A. (1998) Science 280, 1954-1955
14. Ellenberg, J., Lippincott-Schwartz, J., and Presley, J. F. (1999) Trends Cell Biol. 9, 52-56
15. Green, G., Kain, S. R., and Angres, B. (2000) Methods Enzymol. 327, 89-94
16. Heim, R., and Tsien, R. Y. (1996) Curr. Biol. 6, 178-182
17. Zacharias, D. A., Baird, G. S., and Tsien, R. Y. (2000) Curr. Opin. Neurobiol. 10, 416-421
18. Llopis, J., Westin, S., Ricote, M., Wang, J., Cho, C. Y., Kurokawa, R., Rose, D. W., Rosenfeld, M. G., Tsien, R. Y., and Glass, C. K. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 4363-4368
19. Damelin, M., and Silver, P. A. (2000) Mol. Cell 5, 133-140
20. Ruehr, M. L., Zakhary, D. R., Damron, D. S., and Bond, M. (1999) J. Biol. Chem. 274, 33092-33096
21. Janetopoulos, C., Jin, T., and Devreotes, P. (2001) Science 291, 2408-2411
22. Overton, M. C., and Blumer, K. J. (2000) Curr. Biol. 10, 341-344
23. Siegel, R. M., Frederiksen, J. K., Zacharias, D. A., Chan, F. K. M., Johnson, M., Lynch, D., Tsien, R. Y., and Lenardo, M. J. (2000) Science 288, 2354-2357
24. Romoser, V. A., Hinkle, P. M., and Persechini, A. (1997) J. Biol. Chem. 272, 13270-13274
25. Persechini, A., Lynch, J. A., and Romoser, V. A. (1997) Cell Calcium 22, 209-216
26. Miyawaki, A., Llopis, J., Heim, R., McCaffery, J. M., Adams, J. A., Ikura, M., and Tsien, R. Y. (1997) Nature 388, 882-887
27. Persechini, A., and Cronk, B. (1999) J. Biol. Chem. 274, 6827-6830
28. Pearce, L. L., Gandley, R. E., Han, W., Wasserloos, K., Stitt, M., Kanai, A. J., McLaughlin, M. K., Pitt, B. R., and Levitan, E. S. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 477-482
29. Sato, M., Hida, N., Ozawa, T., and Umezawa, Y. (2000) Anal. Chem. 72, 5918-5924
30. Honda, A., Adams, S. R., Sawyer, C. L., Lev-Ram, V., Tsien, R. Y., and Dostmann, W. R. G. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 2437-2442
31. Mahajan, N. P., Harrison-Shostak, D. C., Michaux, J., and Herman, B. (1999) Chem. Biol. 6, 401-409
32. Vanderklish, P. W., Krushel, L. A., Holst, B. H., Gaily, J. A., Crossin, K. L., and Edelman, G. M. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 2253-2258
33. Nagai, Y., Miyazaki, M., Aoki, R., Zama, T., Inouye, S., Hirose, K., Iino, M., and Hagiwara, M. (2000) Nat. Biotechnol. 18, 313-316
34. Baird, G. S., Zacharias, D. A., and Tsien, R. Y. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 11241-11246
35. Heikal, A. A., Hess, S. T., Baird, G. S., Tsien, R. Y., and Webb, W. W. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 11996-12001
36. Kendall, J. M., Dormer, R. L., and Campbell, A. K. (1992) Biochem. Biophys. Res. Comm. 189, 1008-1016
37. Otwinowski, Z., and Minor, W. (1997) Methods Enzymol. 276, 307-326
38. Brunger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Acta Cryst. D Biol. Cryst. 54, 905-921
39. McRee, D. E. (1999) J. Struct. Biol. 125, 156-165
40. Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Cryst. 26, 283-291
41. Sanner, M. F., Olson, A. J., and Spehner, J. C. (1996) Biopolymers 38, 305-320
42. Baird, G. S., Zacharias, D. A., and Tsien, R. Y. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 11984-11989
43. Chesler, M., and Kaila, K. (1992) Trends Neurosci. 15, 396-402
44. Kuner, T., and Augustine, G. J. (2000) Neuron 27, 447-459
45. Nagai, T., Sawano, A., Park, E., and Miyawaki, A. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 3197-3202
46. Rizzuto, R., Pinton, P., Carrington, W., Fay, F. S., Fogarty, K. E., Lifshitz, L. M., Tuft, R. A., and Pozzan, T. (1998) Science 280, 1763-1766
47. Nakai, J., Ohkura, M., and Imoto, K. (2001) Nat. Biotechnol. 19, 137-141
48. Kim, J. H., Johannes, L., Goud, B., Antony, C., Lingwood, C. A., Daneman, R., and Grinstein, S. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 2997-3002
49. Pinton, P., Pozzan, T., and Rizzuto, R. (1998) EMBO J. 17, 5298-5308
50. Lawrence, M. C., and Bourke, P. D. (2000) J. Appl. Cryst. 33, 990-991
51. Kraulis, P. J. (1991) J. Appl. Cryst. 24, 946-950