-
1
-
-
78149481868
-
The piRNA pathway: a fly's perspective on the guardian of the genome
-
10.1016/j.tig.2010.08.007, 20934772
-
Senti K-A, Brennecke J. The piRNA pathway: a fly's perspective on the guardian of the genome. Trends Genet 2010, 26(12):499-509. 10.1016/j.tig.2010.08.007, 20934772.
-
(2010)
Trends Genet
, vol.26
, Issue.12
, pp. 499-509
-
-
Senti, K.-.A.1
Brennecke, J.2
-
2
-
-
78149476037
-
Small RNA-mediated quiescence of transposable elements in animals
-
10.1016/j.devcel.2010.10.011, 21074719
-
Saito K, Siomi MC. Small RNA-mediated quiescence of transposable elements in animals. Developmental Cell 2010, 19:687-697. 10.1016/j.devcel.2010.10.011, 21074719.
-
(2010)
Developmental Cell
, vol.19
, pp. 687-697
-
-
Saito, K.1
Siomi, M.C.2
-
3
-
-
77956172367
-
PiRNA-mediated silencing in Drosophila germlines
-
Siomi MC, Miyoshi T, Siomi H. piRNA-mediated silencing in Drosophila germlines. Semin Cel Dev Biol 2010, 21(7):754-759.
-
(2010)
Semin Cel Dev Biol
, vol.21
, Issue.7
, pp. 754-759
-
-
Siomi, M.C.1
Miyoshi, T.2
Siomi, H.3
-
4
-
-
52049098967
-
A piRNA pathway primed by individual transposons in linked to de novo methylation in mice
-
10.1016/j.molcel.2008.09.003, 2730041, 18922463
-
Aravin AA, Sachidanandam R, Bourc'his D, Schaefer C, Pezic D, Fejes-Toth K, Bestor T, Hannon GJ. A piRNA pathway primed by individual transposons in linked to de novo methylation in mice. Mol Cell 2008, 31:785-799. 10.1016/j.molcel.2008.09.003, 2730041, 18922463.
-
(2008)
Mol Cell
, vol.31
, pp. 785-799
-
-
Aravin, A.A.1
Sachidanandam, R.2
Bourc'his, D.3
Schaefer, C.4
Pezic, D.5
Fejes-Toth, K.6
Bestor, T.7
Hannon, G.J.8
-
5
-
-
34047154356
-
A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in zebrafish
-
10.1016/j.cell.2007.03.026, 17418787
-
Houwing S, Kamminga LM, Berezikov E, Cronembold D, Girard A, van den Elst H, Filippov DV, Blaser H, Raz E, Moens CB, et al. A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in zebrafish. Cell 2007, 129:69-82. 10.1016/j.cell.2007.03.026, 17418787.
-
(2007)
Cell
, vol.129
, pp. 69-82
-
-
Houwing, S.1
Kamminga, L.M.2
Berezikov, E.3
Cronembold, D.4
Girard, A.5
van den Elst, H.6
Filippov, D.V.7
Blaser, H.8
Raz, E.9
Moens, C.B.10
-
6
-
-
33947273235
-
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
-
10.1016/j.cell.2007.01.043, 17346786
-
Brennecke J, Aravin AA, Stark A, Dus M, Kellis M, Sachidanandam R, Hannon GJ. Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell 2007, 128(6):1089-1103. 10.1016/j.cell.2007.01.043, 17346786.
-
(2007)
Cell
, vol.128
, Issue.6
, pp. 1089-1103
-
-
Brennecke, J.1
Aravin, A.A.2
Stark, A.3
Dus, M.4
Kellis, M.5
Sachidanandam, R.6
Hannon, G.J.7
-
7
-
-
33746502166
-
A distinct small RNA pathway silences selfish genetic elements in the germline
-
10.1126/science.1129333, 16809489
-
Vagin VV, Sigova A, C L, Gvozdev V, Zamore PD. A distinct small RNA pathway silences selfish genetic elements in the germline. Science 2006, 313:320-324. 10.1126/science.1129333, 16809489.
-
(2006)
Science
, vol.313
, pp. 320-324
-
-
Vagin, V.V.1
Sigova, A.2
C, L.3
Gvozdev, V.4
Zamore, P.D.5
-
8
-
-
79953089167
-
PIWI-interacting small RNAs: the vanguard of genome defence
-
Siomi MC, Sato K, Pezic D, Aravin AA. PIWI-interacting small RNAs: the vanguard of genome defence. Nature Reviews: Mol Cell Biol 2011, 12:246-258.
-
(2011)
Nature Reviews: Mol Cell Biol
, vol.12
, pp. 246-258
-
-
Siomi, M.C.1
Sato, K.2
Pezic, D.3
Aravin, A.A.4
-
9
-
-
65549105694
-
Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary
-
10.1016/j.cell.2009.03.040, 2882632, 19395010
-
Malone CD, Brennecke J, Dus M, Stark A, McCombie WR, Sachidanandam R, Hannnon GJ. Specialized piRNA pathways act in germline and somatic tissues of the Drosophila ovary. Cell 2009, 137:522-535. 10.1016/j.cell.2009.03.040, 2882632, 19395010.
-
(2009)
Cell
, vol.137
, pp. 522-535
-
-
Malone, C.D.1
Brennecke, J.2
Dus, M.3
Stark, A.4
McCombie, W.R.5
Sachidanandam, R.6
Hannnon, G.J.7
-
10
-
-
44349174824
-
Endogenous RNA interference provdes a somatic defense against Drosophila transposons
-
10.1016/j.cub.2008.05.006, 2812477, 18501606
-
Chung W-J, Okamura K, Martin R, Lai EC. Endogenous RNA interference provdes a somatic defense against Drosophila transposons. Current Biology 2008, 18:795-802. 10.1016/j.cub.2008.05.006, 2812477, 18501606.
-
(2008)
Current Biology
, vol.18
, pp. 795-802
-
-
Chung, W.-.J.1
Okamura, K.2
Martin, R.3
Lai, E.C.4
-
11
-
-
72649094955
-
A broadly conserved primary pathway generates 3'UTR-direceted primary piRNAs
-
10.1016/j.cub.2009.11.064, 2812478, 20022248
-
Robine N, Lau NC, Balla S, Jin Z, Okamura K, Kuramochi-Miyagawa S, Blower MD, Lai EC. A broadly conserved primary pathway generates 3'UTR-direceted primary piRNAs. Current Biology 2009, 19:2066-2076. 10.1016/j.cub.2009.11.064, 2812478, 20022248.
-
(2009)
Current Biology
, vol.19
, pp. 2066-2076
-
-
Robine, N.1
Lau, N.C.2
Balla, S.3
Jin, Z.4
Okamura, K.5
Kuramochi-Miyagawa, S.6
Blower, M.D.7
Lai, E.C.8
-
12
-
-
70349641600
-
Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line
-
10.1101/gr.094896.109, 2765285, 19541914
-
Lau NC, Robine N, Martin R, Chung W-J, Niki Y, Berezikov E, Lai EC. Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line. Genome Research 2009, 19(10):1776-1785. 10.1101/gr.094896.109, 2765285, 19541914.
-
(2009)
Genome Research
, vol.19
, Issue.10
, pp. 1776-1785
-
-
Lau, N.C.1
Robine, N.2
Martin, R.3
Chung, W.-.J.4
Niki, Y.5
Berezikov, E.6
Lai, E.C.7
-
13
-
-
78649679968
-
PiRNAs, transposon silencing, and Drosophila germline development
-
10.1083/jcb.201006034, 2995163, 21115802
-
Khurana JS, Theurkauf W. piRNAs, transposon silencing, and Drosophila germline development. J Cell Biol 2010, 191(5):905-913. 10.1083/jcb.201006034, 2995163, 21115802.
-
(2010)
J Cell Biol
, vol.191
, Issue.5
, pp. 905-913
-
-
Khurana, J.S.1
Theurkauf, W.2
-
14
-
-
0012341115
-
The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective
-
0084.0081-0084.0020
-
Kaminker JS, Bergman CM, Kronmiller B, Carlson J, Svirskas R, Patel S, Frise E, Wheeler DA, Lewis SE, Rubin GM, et al. The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective. Genome Biology 2002, 3:0084.0081-0084.0020.
-
(2002)
Genome Biology
, vol.3
-
-
Kaminker, J.S.1
Bergman, C.M.2
Kronmiller, B.3
Carlson, J.4
Svirskas, R.5
Patel, S.6
Frise, E.7
Wheeler, D.A.8
Lewis, S.E.9
Rubin, G.M.10
-
15
-
-
34250813192
-
The release 5.1 annotation of Drosophila melanogaster heterochromatin
-
10.1126/science.1139815, 2819280, 17569856
-
Smith CD, Shu S, Mungall CJ, Karpen GH. The release 5.1 annotation of Drosophila melanogaster heterochromatin. Science 2007, 316:1586-1591. 10.1126/science.1139815, 2819280, 17569856.
-
(2007)
Science
, vol.316
, pp. 1586-1591
-
-
Smith, C.D.1
Shu, S.2
Mungall, C.J.3
Karpen, G.H.4
-
16
-
-
34250902354
-
Genome sequence of Aedes aegypti, a major arbovirus vector
-
10.1126/science.1138878, 2868357, 17510324
-
Nene V, Wortman JR, Lawson D, Haas B. Genome sequence of Aedes aegypti, a major arbovirus vector. Science 2007, 316(5832):1718-1723. 10.1126/science.1138878, 2868357, 17510324.
-
(2007)
Science
, vol.316
, Issue.5832
, pp. 1718-1723
-
-
Nene, V.1
Wortman, J.R.2
Lawson, D.3
Haas, B.4
-
17
-
-
0035499467
-
Efficient transformation of the yellow fever mosquito Aedes aegypti using the piggyBac transposable element vector pBac[3xP3-EGFPafm]
-
10.1016/S0965-1748(01)00120-5, 11583926
-
Kokoza V, Ahmed A, Wimmer EA, Raikhel AS. Efficient transformation of the yellow fever mosquito Aedes aegypti using the piggyBac transposable element vector pBac[3xP3-EGFPafm]. Insect Biochem Mol Biol 2001, 31:1137-1143. 10.1016/S0965-1748(01)00120-5, 11583926.
-
(2001)
Insect Biochem Mol Biol
, vol.31
, pp. 1137-1143
-
-
Kokoza, V.1
Ahmed, A.2
Wimmer, E.A.3
Raikhel, A.S.4
-
18
-
-
33645454317
-
High efficiency site-specific engineering of the mosquito genome
-
10.1111/j.1365-2583.2006.00615.x, 1602059, 16640723
-
Nimmo DD, Alphey L, Meredith JM, P E. High efficiency site-specific engineering of the mosquito genome. Insect Mol Biol 2006, 15:129-136. 10.1111/j.1365-2583.2006.00615.x, 1602059, 16640723.
-
(2006)
Insect Mol Biol
, vol.15
, pp. 129-136
-
-
Nimmo, D.D.1
Alphey, L.2
Meredith, J.M.3
P, E.4
-
19
-
-
0344824364
-
RNA interference-mediated knockdown of a GATA factor reveals a link to anautogeny in the mosquito Aedes aegypti
-
10.1073/pnas.2235649100, 263821, 14595016
-
Attardo GM, Higgs S, Klingler KA, Vanlandingham DL, Raikhel AS. RNA interference-mediated knockdown of a GATA factor reveals a link to anautogeny in the mosquito Aedes aegypti. Proc Natl Acad Sci USA 2003, 100(23):13374-13379. 10.1073/pnas.2235649100, 263821, 14595016.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, Issue.23
, pp. 13374-13379
-
-
Attardo, G.M.1
Higgs, S.2
Klingler, K.A.3
Vanlandingham, D.L.4
Raikhel, A.S.5
-
21
-
-
79251648043
-
Mobility properties of the Hermes transposable element in transgenic lines of Aedes aegypti
-
3030943, 20596755
-
Smith RC, Atkinson PW. Mobility properties of the Hermes transposable element in transgenic lines of Aedes aegypti. Genetica 2010, 139(1):7-22. 3030943, 20596755.
-
(2010)
Genetica
, vol.139
, Issue.1
, pp. 7-22
-
-
Smith, R.C.1
Atkinson, P.W.2
-
22
-
-
10744230091
-
Gene vector and transposable element behavior in mosquitoes
-
O'Brochta DA, Sethuramuran N, Wilson R, Hice RH, Pinkerton AC, Levesque CS, Bideshi DK, Jasinskiene N, Coates CJ, James AA, et al. Gene vector and transposable element behavior in mosquitoes. Journal of Experimental Biology 2003, 3823-3834.
-
(2003)
Journal of Experimental Biology
, pp. 3823-3834
-
-
O'Brochta, D.A.1
Sethuramuran, N.2
Wilson, R.3
Hice, R.H.4
Pinkerton, A.C.5
Levesque, C.S.6
Bideshi, D.K.7
Jasinskiene, N.8
Coates, C.J.9
James, A.A.10
-
23
-
-
0042740457
-
Post-integration behavior of a Mos1 mariner gene vector in Aedes aegypti
-
10.1016/S0965-1748(03)00044-4, 12915177
-
Wilson R, Orsetti J, Klocko AK, Aluvihare C, Peckham E, Atkinson PW, Lehane MJ, O'Brochta DA. Post-integration behavior of a Mos1 mariner gene vector in Aedes aegypti. Insect Biochem Mol Biol 2003, 33:853-863. 10.1016/S0965-1748(03)00044-4, 12915177.
-
(2003)
Insect Biochem Mol Biol
, vol.33
, pp. 853-863
-
-
Wilson, R.1
Orsetti, J.2
Klocko, A.K.3
Aluvihare, C.4
Peckham, E.5
Atkinson, P.W.6
Lehane, M.J.7
O'Brochta, D.A.8
-
24
-
-
34547535032
-
Post-integration stability of piggyBac in Aedes aegypti
-
10.1016/j.ibmb.2007.05.004, 1986768, 17681233
-
Sethuraman N, Fraser MJ, Eggleston P, O'Brochta DA. Post-integration stability of piggyBac in Aedes aegypti. Insect Biochem Mol Biol 2007, 37(9):941-951. 10.1016/j.ibmb.2007.05.004, 1986768, 17681233.
-
(2007)
Insect Biochem Mol Biol
, vol.37
, Issue.9
, pp. 941-951
-
-
Sethuraman, N.1
Fraser, M.J.2
Eggleston, P.3
O'Brochta, D.A.4
-
25
-
-
71049187301
-
Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps
-
10.1186/1741-7007-7-73, 2779179, 19891766
-
Trauner J, Schinko J, Lorenzen MD, Shippy TD, Wimmer EA, Beeman RW, Klingler M, Bucher G, Brown SJ. Large-scale insertional mutagenesis of a coleopteran stored grain pest, the red flour beetle Tribolium castaneum, identifies embryonic lethal mutations and enhancer traps. BMC Biology 2009, 7:73. 10.1186/1741-7007-7-73, 2779179, 19891766.
-
(2009)
BMC Biology
, vol.7
, pp. 73
-
-
Trauner, J.1
Schinko, J.2
Lorenzen, M.D.3
Shippy, T.D.4
Wimmer, E.A.5
Beeman, R.W.6
Klingler, M.7
Bucher, G.8
Brown, S.J.9
-
26
-
-
10744231523
-
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac
-
10.1038/ng1314, 14981521
-
Thibault ST, Singer MA, Miyazaki WY, Milash B, Dompe NA, Singh CM, Buchholz R, Demsky M, Fawcett R, Francis-Lang HL, et al. A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. Nat Genet 2004, 36(3):283-287. 10.1038/ng1314, 14981521.
-
(2004)
Nat Genet
, vol.36
, Issue.3
, pp. 283-287
-
-
Thibault, S.T.1
Singer, M.A.2
Miyazaki, W.Y.3
Milash, B.4
Dompe, N.A.5
Singh, C.M.6
Buchholz, R.7
Demsky, M.8
Fawcett, R.9
Francis-Lang, H.L.10
-
27
-
-
23744479962
-
Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice
-
10.1016/j.cell.2005.07.013, 16096065
-
Ding S, Wu X, Li G, Han M, Zhuang Y, Xu T. Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice. Cell 2005, 122:473-483. 10.1016/j.cell.2005.07.013, 16096065.
-
(2005)
Cell
, vol.122
, pp. 473-483
-
-
Ding, S.1
Wu, X.2
Li, G.3
Han, M.4
Zhuang, Y.5
Xu, T.6
-
28
-
-
33947731008
-
Mighty Piwia defend the genome against genome intruders
-
10.1016/j.cell.2007.03.028, 17418784
-
O'Donnell KA, Boeke JD. Mighty Piwia defend the genome against genome intruders. Cell 2007, 129:37-44. 10.1016/j.cell.2007.03.028, 17418784.
-
(2007)
Cell
, vol.129
, pp. 37-44
-
-
O'Donnell, K.A.1
Boeke, J.D.2
-
29
-
-
39049191279
-
The RNA interference proteins and vasa locus are involved in the silencing of retrotransposons in the female germline of Drosophila melanogaster
-
Vagin VV, Klenov MS, Kalmykova AI, Stolyarenko AD, Kotelnikov RN, Gvozdev VA. The RNA interference proteins and vasa locus are involved in the silencing of retrotransposons in the female germline of Drosophila melanogaster. RNA Biol 2004, 1(1):54-58.
-
(2004)
RNA Biol
, vol.1
, Issue.1
, pp. 54-58
-
-
Vagin, V.V.1
Klenov, M.S.2
Kalmykova, A.I.3
Stolyarenko, A.D.4
Kotelnikov, R.N.5
Gvozdev, V.A.6
-
30
-
-
0033966406
-
Piwi encodes a nucleoplasmic factor whose activity modulates the number and divsion rate of germ-line stem cells
-
Cox DN, Chao A, Lin H. Piwi encodes a nucleoplasmic factor whose activity modulates the number and divsion rate of germ-line stem cells. Development 2000, 127:503-514.
-
(2000)
Development
, vol.127
, pp. 503-514
-
-
Cox, D.N.1
Chao, A.2
Lin, H.3
-
31
-
-
33947273235
-
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila
-
10.1016/j.cell.2007.01.043, 17346786
-
Brennecke JB, Aravin AA, Stark A, Dus M, Kellis M, Sachidanandam R, Hannon GL. Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell 2007, 128:1089-1103. 10.1016/j.cell.2007.01.043, 17346786.
-
(2007)
Cell
, vol.128
, pp. 1089-1103
-
-
Brennecke, J.B.1
Aravin, A.A.2
Stark, A.3
Dus, M.4
Kellis, M.5
Sachidanandam, R.6
Hannon, G.L.7
-
32
-
-
33947390781
-
A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila
-
10.1126/science.1140494, 17322028
-
Gunawardane LS, Saito K, Nishida KM, Miyoshi K, Kawamura Y, Nagami T, Siomi H, Siomi MC. A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila. Science 2007, 315(5818):1587-1590. 10.1126/science.1140494, 17322028.
-
(2007)
Science
, vol.315
, Issue.5818
, pp. 1587-1590
-
-
Gunawardane, L.S.1
Saito, K.2
Nishida, K.M.3
Miyoshi, K.4
Kawamura, Y.5
Nagami, T.6
Siomi, H.7
Siomi, M.C.8
-
33
-
-
34347378274
-
Pimet, the Drosophila homolog of HEN1, mediates 2'-O-methylation of Piwi-interacting RNAs at their 3' ends
-
10.1101/gad.1563607, 22187706
-
Saito K, Sakaguchi Y, Suzuki T, Suzunki T, Siomi H, Siomi MC. Pimet, the Drosophila homolog of HEN1, mediates 2'-O-methylation of Piwi-interacting RNAs at their 3' ends. Genes & Development 2007, 21:1603-1608. 10.1101/gad.1563607, 22187706.
-
(2007)
Genes & Development
, vol.21
, pp. 1603-1608
-
-
Saito, K.1
Sakaguchi, Y.2
Suzuki, T.3
Suzunki, T.4
Siomi, H.5
Siomi, M.C.6
-
34
-
-
34447291602
-
The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC
-
10.1016/j.cub.2007.06.030, 17604629
-
Horwich MD, Li C, Matranga C, Vagin V, Farley G, Wang P, Zamore PD. The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC. Current Biology 2007, 17:1265-1272. 10.1016/j.cub.2007.06.030, 17604629.
-
(2007)
Current Biology
, vol.17
, pp. 1265-1272
-
-
Horwich, M.D.1
Li, C.2
Matranga, C.3
Vagin, V.4
Farley, G.5
Wang, P.6
Zamore, P.D.7
-
35
-
-
57149104113
-
An epigenetic role for maternally inherited piRNAs in transposon silencing
-
10.1126/science.1165171, 2805124, 19039138
-
Brennecke J, Malone CD, Aravin AA, Sachidanandam R, Stark A, Hannon GJ. An epigenetic role for maternally inherited piRNAs in transposon silencing. Science 2008, 322:1387-1392. 10.1126/science.1165171, 2805124, 19039138.
-
(2008)
Science
, vol.322
, pp. 1387-1392
-
-
Brennecke, J.1
Malone, C.D.2
Aravin, A.A.3
Sachidanandam, R.4
Stark, A.5
Hannon, G.J.6
-
36
-
-
55749087175
-
Cytoptype regulation of P transposable elements in Drosophila melanogaster: repressor polypeptides or piRNAs?
-
10.1534/genetics.108.087072, 2516058, 18579507
-
Jensen PA, Stuart JR, Goodpaster MP, Goodman JW, Simmons MJ. Cytoptype regulation of P transposable elements in Drosophila melanogaster: repressor polypeptides or piRNAs?. Genetics 2008, 179:1785-1793. 10.1534/genetics.108.087072, 2516058, 18579507.
-
(2008)
Genetics
, vol.179
, pp. 1785-1793
-
-
Jensen, P.A.1
Stuart, J.R.2
Goodpaster, M.P.3
Goodman, J.W.4
Simmons, M.J.5
-
37
-
-
53749084653
-
Comparative genomics of small regulatory pathway components in vector mosquitoes
-
10.1186/1471-2164-9-425, 2566310, 18801182
-
Campbell CL, Black WCBI, Hess AM, Foy BD. Comparative genomics of small regulatory pathway components in vector mosquitoes. BMC Genomics 2008, 9:425. 10.1186/1471-2164-9-425, 2566310, 18801182.
-
(2008)
BMC Genomics
, vol.9
, pp. 425
-
-
Campbell, C.L.1
Black, W.C.B.I.2
Hess, A.M.3
Foy, B.D.4
-
38
-
-
60149088848
-
Origins and mechanisms of miRNAs and siRNAs
-
Carthew RW, Sontheimer EJ. Origins and mechanisms of miRNAs and siRNAs. Cell 2009, 136:632-655.
-
(2009)
Cell
, vol.136
, pp. 632-655
-
-
Carthew, R.W.1
Sontheimer, E.J.2
-
39
-
-
33846634709
-
Testis-specific expression of the ß2 tubulin promoter of Aedes aegypti and its application as a genetic sex-separation marker
-
10.1111/j.1365-2583.2006.00701.x, 17257209
-
Smith RC, Walter MF, Hice RH, O'Brochta DA, Atkinson PW. Testis-specific expression of the ß2 tubulin promoter of Aedes aegypti and its application as a genetic sex-separation marker. Insect Mol Biol 2007, 16:61-71. 10.1111/j.1365-2583.2006.00701.x, 17257209.
-
(2007)
Insect Mol Biol
, vol.16
, pp. 61-71
-
-
Smith, R.C.1
Walter, M.F.2
Hice, R.H.3
O'Brochta, D.A.4
Atkinson, P.W.5
-
40
-
-
74049139612
-
Transpositionally active episomal hAT elements
-
O'Brochta DA, Stosic CD, Pilitt K, Subramanian RA, Hice R, Atkinson PW. Transpositionally active episomal hAT elements. BMC Mol Biol 2009, 14(10):108.
-
(2009)
BMC Mol Biol
, vol.14
, Issue.10
, pp. 108
-
-
O'Brochta, D.A.1
Stosic, C.D.2
Pilitt, K.3
Subramanian, R.A.4
Hice, R.5
Atkinson, P.W.6
-
41
-
-
34547535032
-
Post-integration stability of piggyBac in Aedes aegypti
-
10.1016/j.ibmb.2007.05.004, 1986768, 17681233
-
Sethuraman N, Fraser MJJ, Eggleston P, O'Brochta DA. Post-integration stability of piggyBac in Aedes aegypti. Insect Biochem Mol Biol 2007, 37(9):941-951. 10.1016/j.ibmb.2007.05.004, 1986768, 17681233.
-
(2007)
Insect Biochem Mol Biol
, vol.37
, Issue.9
, pp. 941-951
-
-
Sethuraman, N.1
Fraser, M.J.J.2
Eggleston, P.3
O'Brochta, D.A.4
-
42
-
-
60149098474
-
Small RNAs as guardians of the genome
-
10.1016/j.cell.2009.01.045, 2792755, 19239887
-
Malone CD, Hannon GJ. Small RNAs as guardians of the genome. Cell 2009, 136:656-668. 10.1016/j.cell.2009.01.045, 2792755, 19239887.
-
(2009)
Cell
, vol.136
, pp. 656-668
-
-
Malone, C.D.1
Hannon, G.J.2
-
43
-
-
59649104079
-
Bombyx small RNAs: Genomic defense system against transposon in the silkworm, Bombyx mori
-
Kawaoka S, Hayashi N, Katsuma S, Kishino H, Kohara Y, Mita K, Shimada T. Bombyx small RNAs: Genomic defense system against transposon in the silkworm, Bombyx mori. Insect Biochem Molec Biol 2008,
-
(2008)
Insect Biochem Molec Biol
-
-
Kawaoka, S.1
Hayashi, N.2
Katsuma, S.3
Kishino, H.4
Kohara, Y.5
Mita, K.6
Shimada, T.7
-
44
-
-
33747369856
-
Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome
-
10.1101/gad.1454806, 1553205, 16882972
-
Saito K, Nishida KM, Mori T, Kawamura Y, Miyoshi K, Nagami T, Siomi H, Siomi MC. Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome. Genes Dev 2006, 20:2214-2222. 10.1101/gad.1454806, 1553205, 16882972.
-
(2006)
Genes Dev
, vol.20
, pp. 2214-2222
-
-
Saito, K.1
Nishida, K.M.2
Mori, T.3
Kawamura, Y.4
Miyoshi, K.5
Nagami, T.6
Siomi, H.7
Siomi, M.C.8
-
45
-
-
36949016056
-
Computational analysis of mouse piRNA sequence and biogenesis
-
10.1371/journal.pcbi.0030222, 2065894, 17997596
-
Betel D, Sheridan R, Marks DS, Sander C. Computational analysis of mouse piRNA sequence and biogenesis. PLoS Comput Biol 2007, 3(11):e222. 10.1371/journal.pcbi.0030222, 2065894, 17997596.
-
(2007)
PLoS Comput Biol
, vol.3
, Issue.11
-
-
Betel, D.1
Sheridan, R.2
Marks, D.S.3
Sander, C.4
-
46
-
-
84860389782
-
A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors
-
10.1038/emboj.2011.308, 21863019
-
Handler D, Olivieri D, Novatchkova M, Gruber FS, Meixner K, Mechtler K, Stark A, Sachidanaandam R, Brennecke J. A systematic analysis of Drosophila TUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors. EMBO J 2011, 30:3977-3993. 10.1038/emboj.2011.308, 21863019.
-
(2011)
EMBO J
, vol.30
, pp. 3977-3993
-
-
Handler, D.1
Olivieri, D.2
Novatchkova, M.3
Gruber, F.S.4
Meixner, K.5
Mechtler, K.6
Stark, A.7
Sachidanaandam, R.8
Brennecke, J.9
-
47
-
-
77955101011
-
Small RNA-based silencing strategies for transposons in the process of invading Drosophila species
-
10.1261/rna.2217810, 2905761, 20581131
-
Rozhkov NV, Aravin AA, Zelentsova ES, Schostak NG, Sachidanandam R, McCombie WR, Hannon GJ, Evgen'ev MB. Small RNA-based silencing strategies for transposons in the process of invading Drosophila species. RNA 2010, 16:1634-1645. 10.1261/rna.2217810, 2905761, 20581131.
-
(2010)
RNA
, vol.16
, pp. 1634-1645
-
-
Rozhkov, N.V.1
Aravin, A.A.2
Zelentsova, E.S.3
Schostak, N.G.4
Sachidanandam, R.5
McCombie, W.R.6
Hannon, G.J.7
Evgen'ev, M.B.8
-
48
-
-
70450265542
-
Benchmarking next-generation transcriptome sequencing for functional and evoltionary genomics
-
10.1093/molbev/msp188, 19706727
-
Gibbons JG, Janson EM, Hittinger CT, Johnston M, Abbot P, Rokas A. Benchmarking next-generation transcriptome sequencing for functional and evoltionary genomics. Mol Biol Evol 2009, 26(12):2731-2744. 10.1093/molbev/msp188, 19706727.
-
(2009)
Mol Biol Evol
, vol.26
, Issue.12
, pp. 2731-2744
-
-
Gibbons, J.G.1
Janson, E.M.2
Hittinger, C.T.3
Johnston, M.4
Abbot, P.5
Rokas, A.6
-
49
-
-
0034284437
-
Repbase update: a database and an electronic journal of repetitive elements
-
10.1016/S0168-9525(00)02093-X, 10973072
-
Jurka J. Repbase update: a database and an electronic journal of repetitive elements. Trends Genet 2000, 16(9):418-420. 10.1016/S0168-9525(00)02093-X, 10973072.
-
(2000)
Trends Genet
, vol.16
, Issue.9
, pp. 418-420
-
-
Jurka, J.1
-
50
-
-
79955938975
-
Phylogenetic and functional characterization of the hAT transposon superfamily
-
10.1534/genetics.111.126813, 21368277
-
Arensburger P, Hice RH, Zhou L, Smith RC, Tom AC, Wright JA, J K, O'Brochta DA, Craig NL, Atkinson PW. Phylogenetic and functional characterization of the hAT transposon superfamily. Genetics 2011, 188(1):45-57. 10.1534/genetics.111.126813, 21368277.
-
(2011)
Genetics
, vol.188
, Issue.1
, pp. 45-57
-
-
Arensburger, P.1
Hice, R.H.2
Zhou, L.3
Smith, R.C.4
Tom, A.C.5
Wright, J.A.6
J., K.7
O'Brochta, D.A.8
Craig, N.L.9
Atkinson, P.W.10
-
51
-
-
34447649426
-
Genomic and evolutionary analyses of Tango transposons in Aedes aegypti, Anopheles gambiae and other mosquito species
-
10.1111/j.1365-2583.2007.00735.x, 17506852
-
Coy MR, Tu Z. Genomic and evolutionary analyses of Tango transposons in Aedes aegypti, Anopheles gambiae and other mosquito species. Insect Mol Biol 2007, 16(4):411-421. 10.1111/j.1365-2583.2007.00735.x, 17506852.
-
(2007)
Insect Mol Biol
, vol.16
, Issue.4
, pp. 411-421
-
-
Coy, M.R.1
Tu, Z.2
-
52
-
-
34547868142
-
The Juan non-LTR retrotransposon in mosquitoes: genomic impact, vertical transmission and indications of recent and widespread activity
-
10.1186/1471-2148-7-112, 1947958, 17620143
-
Biedler JK, Tu Z. The Juan non-LTR retrotransposon in mosquitoes: genomic impact, vertical transmission and indications of recent and widespread activity. BMC Evolutionary Biology 2007, 7:112. 10.1186/1471-2148-7-112, 1947958, 17620143.
-
(2007)
BMC Evolutionary Biology
, vol.7
, pp. 112
-
-
Biedler, J.K.1
Tu, Z.2
-
53
-
-
0031827506
-
Strutural, genomic, and phylogenetic analyssis of Lian, a novel family of non-LTR retrotransposons in the yellow fever mosquito, Aedes aegypti
-
Tu Z, Isoe J, Guzova JA. Strutural, genomic, and phylogenetic analyssis of Lian, a novel family of non-LTR retrotransposons in the yellow fever mosquito, Aedes aegypti. Mol Biol Evol 1998, 15(7).
-
(1998)
Mol Biol Evol
, vol.15
, Issue.7
-
-
Tu, Z.1
Isoe, J.2
Guzova, J.A.3
-
54
-
-
0032708964
-
MosquI, a novel family of mosquito retrotransposons distantly related to the Drosophila I factors, may consist of elements of more than one origin
-
Tu Z, Hill JJ. MosquI, a novel family of mosquito retrotransposons distantly related to the Drosophila I factors, may consist of elements of more than one origin. Mol Biol Evol 1999, 16(12):1675-1686.
-
(1999)
Mol Biol Evol
, vol.16
, Issue.12
, pp. 1675-1686
-
-
Tu, Z.1
Hill, J.J.2
-
55
-
-
44349104241
-
An endogenous small interfering RNA pathway in Drosophila
-
10.1038/nature07007, 2895258, 18463631
-
Czech B, Malone CD, Zhou R, Stark A, Schlingheyde C, Dus M, Perrrimon N, Kellis M, Wohlshlegel JA, Sachidanaandam R, et al. An endogenous small interfering RNA pathway in Drosophila. Nature 2008, 453:798-804. 10.1038/nature07007, 2895258, 18463631.
-
(2008)
Nature
, vol.453
, pp. 798-804
-
-
Czech, B.1
Malone, C.D.2
Zhou, R.3
Stark, A.4
Schlingheyde, C.5
Dus, M.6
Perrrimon, N.7
Kellis, M.8
Wohlshlegel, J.A.9
Sachidanaandam, R.10
-
56
-
-
44449096738
-
Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells
-
10.1126/science.1157396, 2953241, 18403677
-
Ghildiyal M, Seitz H, Horwich MD, Li C, Du T, Lee S, Xu J, Kittler ELW, Zapp ML, Weng Z, et al. Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells. Science 2008, 320:1077-1081. 10.1126/science.1157396, 2953241, 18403677.
-
(2008)
Science
, vol.320
, pp. 1077-1081
-
-
Ghildiyal, M.1
Seitz, H.2
Horwich, M.D.3
Li, C.4
Du, T.5
Lee, S.6
Xu, J.7
Kittler, E.L.W.8
Zapp, M.L.9
Weng, Z.10
-
57
-
-
44349103084
-
Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells
-
10.1038/nature06938, 18463636
-
Kawamura Y, Saito K, Kin T, Ono Y, Asai K, Sunohara T, Okada TN, Siomi MC, Siomi H. Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells. Nature 2008, 453:793-798. 10.1038/nature06938, 18463636.
-
(2008)
Nature
, vol.453
, pp. 793-798
-
-
Kawamura, Y.1
Saito, K.2
Kin, T.3
Ono, Y.4
Asai, K.5
Sunohara, T.6
Okada, T.N.7
Siomi, M.C.8
Siomi, H.9
-
58
-
-
79953089167
-
PIWI-interacting small RNAs: the vanguard of genome defence
-
10.1038/nrm3089, 21427766
-
Siomi MC, Sato K, Pezic D, Aravin AA. PIWI-interacting small RNAs: the vanguard of genome defence. Nat Rev Mol Cell Biol 2011, 12(4):246-258. 10.1038/nrm3089, 21427766.
-
(2011)
Nat Rev Mol Cell Biol
, vol.12
, Issue.4
, pp. 246-258
-
-
Siomi, M.C.1
Sato, K.2
Pezic, D.3
Aravin, A.A.4
-
59
-
-
35548991887
-
Gene silencing mechanisms mediated by Aubergine-piRNA complexes in Drosophila male gonad
-
10.1261/rna.744307, 2040086, 17872506
-
Nishida KM, Saito K, Mori T, Kawamura Y, Nagami-Okada T, Inagaki S, Siomi H, Siomi MC. Gene silencing mechanisms mediated by Aubergine-piRNA complexes in Drosophila male gonad. RNA 2007, 13:1911-1922. 10.1261/rna.744307, 2040086, 17872506.
-
(2007)
RNA
, vol.13
, pp. 1911-1922
-
-
Nishida, K.M.1
Saito, K.2
Mori, T.3
Kawamura, Y.4
Nagami-Okada, T.5
Inagaki, S.6
Siomi, H.7
Siomi, M.C.8
-
60
-
-
70449519397
-
A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila
-
10.1038/nature08501, 19812547
-
Saito K, Inagaki S, Mituyama T, Kawamura Y, Ono Y, Sakota E, Kotani H, Asai K, Siomi H, Siomi MC. A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila. Nature 2009, 461:1296-1299. 10.1038/nature08501, 19812547.
-
(2009)
Nature
, vol.461
, pp. 1296-1299
-
-
Saito, K.1
Inagaki, S.2
Mituyama, T.3
Kawamura, Y.4
Ono, Y.5
Sakota, E.6
Kotani, H.7
Asai, K.8
Siomi, H.9
Siomi, M.C.10
-
61
-
-
58149399344
-
Alphavirus-derived small RNAs modulate pathogenesis in disease vector mosquitoes
-
Myles KM, Wiley MR, Morazzani EM, Adelman ZN. Alphavirus-derived small RNAs modulate pathogenesis in disease vector mosquitoes. Proc Natl Acad, Sci USA 2008, 105(50):19938-19943.
-
(2008)
Proc Natl Acad, Sci USA
, vol.105
, Issue.50
, pp. 19938-19943
-
-
Myles, K.M.1
Wiley, M.R.2
Morazzani, E.M.3
Adelman, Z.N.4
-
62
-
-
78449236013
-
C6/36 Aedes albopictus cells have a dysfunctional antiviral RNA interference response
-
10.1371/journal.pntd.0000856, 2964293, 21049065
-
Brackney DE, Scott JC, Sagawa F, Woodward JE, Miller NA, Schilkey FD, Mudge J, Wilusz J, Olson KE, Blair CD, et al. C6/36 Aedes albopictus cells have a dysfunctional antiviral RNA interference response. PLoS Neglected Tropical Diseases 2010, 4(10):e856. 10.1371/journal.pntd.0000856, 2964293, 21049065.
-
(2010)
PLoS Neglected Tropical Diseases
, vol.4
, Issue.10
-
-
Brackney, D.E.1
Scott, J.C.2
Sagawa, F.3
Woodward, J.E.4
Miller, N.A.5
Schilkey, F.D.6
Mudge, J.7
Wilusz, J.8
Olson, K.E.9
Blair, C.D.10
-
63
-
-
79952062931
-
Small RNA profiling of dengue virus-mosquito interactions implicates the PIWI RNA pathway in anti-viral defense
-
10.1186/1471-2180-11-45, 3060848, 21356105
-
Hess AM, Prasad AN, Ptitsyn A, Ebel GD, Olson KE, Barbacioru C, Monighetti C, Campbell CL. Small RNA profiling of dengue virus-mosquito interactions implicates the PIWI RNA pathway in anti-viral defense. BMC Microbiology 2011, 11:45. 10.1186/1471-2180-11-45, 3060848, 21356105.
-
(2011)
BMC Microbiology
, vol.11
, pp. 45
-
-
Hess, A.M.1
Prasad, A.N.2
Ptitsyn, A.3
Ebel, G.D.4
Olson, K.E.5
Barbacioru, C.6
Monighetti, C.7
Campbell, C.L.8
-
64
-
-
0037352528
-
Maelstrom, a Drosophila spindle-class gene, encodes a protein that colocalizes with Vasa and RDE1/AGO1 homolog, Aubergine, in nuage
-
10.1242/dev.00310, 12538514
-
Findley SD, Tamanaha M, Clegg NJ, Ruohola-Baker H. Maelstrom, a Drosophila spindle-class gene, encodes a protein that colocalizes with Vasa and RDE1/AGO1 homolog, Aubergine, in nuage. Development 2003, 130:859-871. 10.1242/dev.00310, 12538514.
-
(2003)
Development
, vol.130
, pp. 859-871
-
-
Findley, S.D.1
Tamanaha, M.2
Clegg, N.J.3
Ruohola-Baker, H.4
-
65
-
-
48549092573
-
Mouse maelstrom, a component of nuage, is essential for spermatogenesis and transposon repression in meosis
-
10.1016/j.devcel.2008.05.015, 2546488, 18694567
-
Soper SFC, van der Heijden GW, Hardiman TC, Goodheart M, Martin SL, de Boer P, Bortvin A. Mouse maelstrom, a component of nuage, is essential for spermatogenesis and transposon repression in meosis. Developmental Cell 2008, 15:285-297. 10.1016/j.devcel.2008.05.015, 2546488, 18694567.
-
(2008)
Developmental Cell
, vol.15
, pp. 285-297
-
-
Soper, S.F.C.1
van der Heijden, G.W.2
Hardiman, T.C.3
Goodheart, M.4
Martin, S.L.5
de Boer, P.6
Bortvin, A.7
-
66
-
-
34249849029
-
Unique germ-line organelle, nuage functions to repress selfish genetic elements in Drosophila melanogaster
-
Lim AK, Kai T. Unique germ-line organelle, nuage functions to repress selfish genetic elements in Drosophila melanogaster. Proc Natl Acad, Sci USA 2007, 104(16):6714-6719.
-
(2007)
Proc Natl Acad, Sci USA
, vol.104
, Issue.16
, pp. 6714-6719
-
-
Lim, A.K.1
Kai, T.2
-
67
-
-
85158058496
-
Miniature inverted-repeat transposable elements (MITEs) and their relationship with established DNA transposons
-
Washington, DC: American Society for Microbiology Press, Craig NL, Craigie R, Gellert M, Lambowitz AM
-
Feschotte C, Zhang X, Wessler S. Miniature inverted-repeat transposable elements (MITEs) and their relationship with established DNA transposons. Mobile DNA II 2002, 1147-1158. Washington, DC: American Society for Microbiology Press, Craig NL, Craigie R, Gellert M, Lambowitz AM.
-
(2002)
Mobile DNA II
, pp. 1147-1158
-
-
Feschotte, C.1
Zhang, X.2
Wessler, S.3
-
68
-
-
61449173808
-
Identification of minature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: New functional impllications for MITEs
-
2612961, 19037014
-
Kuang H, Padmanabhan C, Li F, Kamei A, Bhaskar PB, Ouyang S, Jiang J, Buell CR, Baker B. Identification of minature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: New functional impllications for MITEs. Genome Research 2009, 19:42-56. 2612961, 19037014.
-
(2009)
Genome Research
, vol.19
, pp. 42-56
-
-
Kuang, H.1
Padmanabhan, C.2
Li, F.3
Kamei, A.4
Bhaskar, P.B.5
Ouyang, S.6
Jiang, J.7
Buell, C.R.8
Baker, B.9
-
69
-
-
34250729886
-
Origin and evolution of human microRNAs from transposable elements
-
1894593, 17435244
-
Piriyapongsa J, Marino-Ramirez L, Jordan IK. Origin and evolution of human microRNAs from transposable elements. Genetics 2007, 176:1323-1337. 1894593, 17435244.
-
(2007)
Genetics
, vol.176
, pp. 1323-1337
-
-
Piriyapongsa, J.1
Marino-Ramirez, L.2
Jordan, I.K.3
-
70
-
-
42449099982
-
Dual coding of siRNAs and miRNAs by plant transposable elements
-
10.1261/rna.916708, 2327354, 18367716
-
Piriyapongsa J, Jordan IK. Dual coding of siRNAs and miRNAs by plant transposable elements. RNA 2008, 14:814-821. 10.1261/rna.916708, 2327354, 18367716.
-
(2008)
RNA
, vol.14
, pp. 814-821
-
-
Piriyapongsa, J.1
Jordan, I.K.2
-
71
-
-
10044244768
-
SiRNAs trageting an intronic transposin in the regulation of natural flowering behavior in Arabidopsis
-
10.1101/gad.1217304, 22187706
-
Liu J, He Y, Amasino R, Chen X. siRNAs trageting an intronic transposin in the regulation of natural flowering behavior in Arabidopsis. Genes & Development 2004, 18:2873-2878. 10.1101/gad.1217304, 22187706.
-
(2004)
Genes & Development
, vol.18
, pp. 2873-2878
-
-
Liu, J.1
He, Y.2
Amasino, R.3
Chen, X.4
-
72
-
-
0035838369
-
Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline
-
10.1016/S0960-9822(01)00299-8, 11470406
-
Aravin AA, Naumova NM, Tulin AV, Vagin VV, Rozovsky YM, Gvozdev VA. Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline. Curr Biol 2001, 11(13):1017-1027. 10.1016/S0960-9822(01)00299-8, 11470406.
-
(2001)
Curr Biol
, vol.11
, Issue.13
, pp. 1017-1027
-
-
Aravin, A.A.1
Naumova, N.M.2
Tulin, A.V.3
Vagin, V.V.4
Rozovsky, Y.M.5
Gvozdev, V.A.6
-
73
-
-
48549092573
-
Mouse Maelstrom, a component of nuage is essential for spermatogenesis and transposon repression in meiosis
-
10.1016/j.devcel.2008.05.015, 2546488, 18694567
-
Soper SFC, van der Heijden GW, Hardiman TC, Goodheart M, Martin SL, de Boer P, Bortvin A. Mouse Maelstrom, a component of nuage is essential for spermatogenesis and transposon repression in meiosis. Developmental Cell 2008, 15:285-297. 10.1016/j.devcel.2008.05.015, 2546488, 18694567.
-
(2008)
Developmental Cell
, vol.15
, pp. 285-297
-
-
Soper, S.F.C.1
van der Heijden, G.W.2
Hardiman, T.C.3
Goodheart, M.4
Martin, S.L.5
de Boer, P.6
Bortvin, A.7
-
74
-
-
78449243049
-
Comparison of dengue virus type 2-specific small RNAs from RNA interference-competent and -incompetent mosquito cells
-
Scott JC, Brackney DE, Campbell CL, Bondu-Hawkins V, Hjelle B, Ebel GD, Olson KE, Blair CD. Comparison of dengue virus type 2-specific small RNAs from RNA interference-competent and -incompetent mosquito cells. PlOS NTM 2010, 4:(10).
-
(2010)
PlOS NTM
, vol.4
, Issue.10
-
-
Scott, J.C.1
Brackney, D.E.2
Campbell, C.L.3
Bondu-Hawkins, V.4
Hjelle, B.5
Ebel, G.D.6
Olson, K.E.7
Blair, C.D.8
-
75
-
-
10744230091
-
Gene vector and transposable element behavior in mosquitoes
-
O'Brochta DA, Sethuraman N, Wilson R, Hice RH, Pinkerton AC, Levesque CS, Bideshi D, Jasinskiene J, Coates CJ, James AA, et al. Gene vector and transposable element behavior in mosquitoes. J Experimental Biol 2003, 206:3823-3834.
-
(2003)
J Experimental Biol
, vol.206
, pp. 3823-3834
-
-
O'Brochta, D.A.1
Sethuraman, N.2
Wilson, R.3
Hice, R.H.4
Pinkerton, A.C.5
Levesque, C.S.6
Bideshi, D.7
Jasinskiene, J.8
Coates, C.J.9
James, A.A.10
-
76
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
10.1186/gb-2009-10-3-r25, 2690996, 19261174
-
Langmead B, Trapnell C, Pop M, Salzber SL. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 2009, 10(3):R25. 10.1186/gb-2009-10-3-r25, 2690996, 19261174.
-
(2009)
Genome Biol
, vol.10
, Issue.3
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzber, S.L.4
-
77
-
-
0036226603
-
BLAT - the BLAST - like alignment tool
-
187518, 11932250
-
Kent WJ. BLAT - the BLAST - like alignment tool. Genome Res 2002, 12:656-664. 187518, 11932250.
-
(2002)
Genome Res
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
78
-
-
2142738304
-
WebLogo: a sequence logo generator
-
10.1101/gr.849004, 419797, 15173120
-
Crooks GE, Hon G, Chandonia JM, Brenner SE. WebLogo: a sequence logo generator. Genome Res 2004, 14(6):1188-1190. 10.1101/gr.849004, 419797, 15173120.
-
(2004)
Genome Res
, vol.14
, Issue.6
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
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