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Volumn 52, Issue 11, 2011, Pages 1957-1972

HRE-type genes are regulated by growth-related changes in internal oxygen concentrations during the normal development of potato (solanum tuberosum) tubers

Author keywords

Co expression; ERF; Hypoxia; Potato; Solanum tuberosum; Tuber

Indexed keywords

OXYGEN; PLANT RNA; STARCH; VEGETABLE PROTEIN;

EID: 81055147024     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcr128     Document Type: Article
Times cited : (21)

References (70)
  • 1
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • Akaike, H. (1974) A new look at the statistical model identification. IEEE Trans. Automat. Control 19: 716-723.
    • (1974) IEEE Trans. Automat. Control , vol.19 , pp. 716-723
    • Akaike, H.1
  • 3
    • 0030988807 scopus 로고    scopus 로고
    • Developmental changes of enzymes involved in conversion of sucrose to hexose-phosphate during early tuberisation of potato
    • DOI 10.1007/s004250050122
    • Appeldoorn, N.J.G., de Bruijn, S.M., Koot-Gronsveld, E.A.M., Visser, R.G.F., Vreugdenhil, D. and Van Der Plas, L.H.W. (1997) Developmental changes of enzymes involved in conversion of sucrose to hexose-phosphate during early tuberisation of potato. Planta 202: 220-226. (Pubitemid 27243122)
    • (1997) Planta , vol.202 , Issue.2 , pp. 220-226
    • Appeldoorn, N.J.G.1    De Bruijn, S.M.2    Koot-Gronsveld, E.A.M.3    Visser, R.G.F.4    Vreugdenhil, D.5    Van Der Plas, L.H.W.6
  • 4
    • 58149307466 scopus 로고    scopus 로고
    • QuantPrime-a flexible tool for reliable high-throughput primer design for quantitative PCR
    • Arvidsson, S., Kwasniewski, M., Riano-Pachon, D.M. and Mueller-Roeber, B. (2008) QuantPrime-a flexible tool for reliable high-throughput primer design for quantitative PCR. BMC Bioinformatics 9: 465.
    • (2008) BMC Bioinformatics , vol.9 , pp. 465
    • Arvidsson, S.1    Kwasniewski, M.2    Riano-Pachon, D.M.3    Mueller-Roeber, B.4
  • 5
    • 0001635863 scopus 로고
    • Evaluation of methods for determining internal gases in banana fruit
    • Banks, N.H. (1983) Evaluation of methods for determining internal gases in banana fruit. J. Exp. Bot. 34: 871-879.
    • (1983) J. Exp. Bot , vol.34 , pp. 871-879
    • Banks, N.H.1
  • 6
    • 65249164096 scopus 로고    scopus 로고
    • H NMR, GC-EI-TOFMS, and data set correlation for fruit metabolomics: Application to spatial metabolite analysis in melon
    • Biais, B., Allwood, J.W., Deborde, C., Xu, Y., Maucourt, M., Beauvoit, B. et al. (2009) H NMR, GC-EI-TOFMS, and data set correlation for fruit metabolomics: application to spatial metabolite analysis in melon. Anal. Chem. 81: 2884-2894.
    • (2009) Anal. Chem , vol.81 , pp. 2884-2894
    • Biais, B.1    Allwood, J.W.2    Deborde, C.3    Xu, Y.4    Maucourt, M.5    Beauvoit, B.6
  • 7
    • 0041508877 scopus 로고    scopus 로고
    • A bypass of sucrose synthase leads to low internal oxygen and impaired metabolic performance in growing potato tubers
    • DOI 10.1104/pp.103.022236
    • Bologa, K.L., Fernie, A.R., Leisse, A., Ehlers Loureiro, M. and Geigenberger, P. (2003) A bypass of sucrose synthase leads to low internal oxygen and impaired metabolic performance in growing potato tubers. Plant Physiol. 132: 2058-2072. (Pubitemid 37024166)
    • (2003) Plant Physiology , vol.132 , Issue.4 , pp. 2058-2072
    • Bologa, K.L.1    Fernie, A.R.2    Leisse, A.3    Ehlers Loureiro, M.4    Geigenberger, P.5
  • 8
    • 36049029610 scopus 로고    scopus 로고
    • Low oxygen sensing and balancing in plant seeds: A role for nitric oxide
    • DOI 10.1111/j.1469-8137.2007.02226.x
    • Borisjuk, L., Macherel, D., Benamar, A., Wobus, U. and Rolletshek, H. (2007) Low oxygen sensing and balancing in plant seeds: a role for nitric oxide. New Phytol. 176: 813-823. (Pubitemid 350098813)
    • (2007) New Phytologist , vol.176 , Issue.4 , pp. 813-823
    • Borisjuk, L.1    Macherel, D.2    Benamar, A.3    Wobus, U.4    Rolletschek, H.5
  • 9
    • 12744276575 scopus 로고    scopus 로고
    • Isolation of a cDNA from potato with structural similarity to the AP2 gene superfamily
    • Campbell, M.A., Woodring, A. and Stidd, J. (1998) Isolation of a cDNA from potato with structural similarity to the AP2 gene superfamily. Plant Physiol. 117: 1127.
    • (1998) Plant Physiol , vol.117 , pp. 1127
    • Campbell, M.A.1    Woodring, A.2    Stidd, J.3
  • 10
    • 26844464130 scopus 로고
    • Effects of relative humidity, oxygen, and carbon dioxide on initiation and early development of stolons and tubers
    • Cary, J.W. (1986) Effects of relative humidity, oxygen, and carbon dioxide on initiation and early development of stolons and tubers. Amer. J. Potato Res. 63: 619-627.
    • (1986) Amer. J. Potato Res , vol.63 , pp. 619-627
    • Cary, J.W.1
  • 11
    • 77957746239 scopus 로고    scopus 로고
    • Comparisons of early transcriptome responses to low-oxygen environments in three dicotyledonous plant species
    • Christianson, A.J., Llewellyn, D.J., Dennis, E.S. and Wilson, W.I. (2010) Comparisons of early transcriptome responses to low-oxygen environments in three dicotyledonous plant species. Plant Signal. Behav. 5: 1006-1009.
    • (2010) Plant Signal. Behav. , vol.5 , pp. 1006-1009
    • Christianson, A.J.1    Llewellyn, D.J.2    Dennis, E.S.3    Wilson, W.I.4
  • 12
    • 32644481938 scopus 로고    scopus 로고
    • Genome-wide identification and testing of superior reference genes for transcript normalization in arabidopsis
    • DOI 10.1104/pp.105.063743
    • Czechowski, T., Stitt, M., Altmann, T., Udvardi, M.K. and Scheible, W.R. (2005) Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol. 139: 5-17. (Pubitemid 43951587)
    • (2005) Plant Physiology , vol.139 , Issue.1 , pp. 5-17
    • Czechowski, T.1    Stitt, M.2    Altmann, T.3    Udvardi, M.K.4    Scheible, W.-R.5
  • 13
    • 0033736476 scopus 로고    scopus 로고
    • Genetic network inference: From co-expression clustering to reverse engineering
    • D'Haeseleer, P., Liang, S. and Somogyi, R. (2000) Genetic network inference: from co-expression clustering to reverse engineering. Bioinformatics 16: 707.
    • (2000) Bioinformatics , vol.16 , pp. 707
    • D'Haeseleer, P.1    Liang, S.2    Somogyi, R.3
  • 14
    • 0001885544 scopus 로고    scopus 로고
    • Mining the gene expression matrix: Inferring gene relationships from large-scale gene expression data
    • Edited by Holcombe, M. and Paton., R. Plenum Press, New York
    • D'Haeseleer, P., Wen, X., Fuhrman, S. and Somogyi, R. (1997) Mining the gene expression matrix: inferring gene relationships from large-scale gene expression data. In Information Processing in Cells and Tissues. Edited by Holcombe, M. and Paton., R. pp. 203-212. Plenum Press, New York.
    • (1997) Information Processing in Cells and Tissues , pp. 203-212
    • D'Haeseleer, P.1    Wen, X.2    Fuhrman, S.3    Somogyi, R.4
  • 15
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • DOI 10.1093/nar/gkh340
    • Edgar, R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucl. Acids Res. 32: 1792-1797. (Pubitemid 38832724)
    • (2004) Nucleic Acids Research , vol.32 , Issue.5 , pp. 1792-1797
    • Edgar, R.C.1
  • 17
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 18
    • 0036787226 scopus 로고    scopus 로고
    • Altered metabolic fluxes result from shifts in metabolite levels in sucrose phosphorylase-expressing potato tubers
    • Fernie, A.R., Tiessen, A., Stitt, M., Willmitzer, L. and Geigenberger, P. (2002) Altered metabolic fluxes result from shifts in metabolite levels in sucrose phosphorylase-expressing potato tubers. Plant Cell Environ. 25: 1219-1232.
    • (2002) Plant Cell Environ , vol.25 , pp. 1219-1232
    • Fernie, A.R.1    Tiessen, A.2    Stitt, M.3    Willmitzer, L.4    Geigenberger, P.5
  • 19
    • 77249131395 scopus 로고    scopus 로고
    • Comparative transcriptome analysis coupled to X-ray CT reveals sucrose supply and growth velocity as major determinants of potato tuber starch biosynthesis
    • Ferreira, S.J., Senninh, M., Sonnewald, S., Kessling, P., Goldstein, R. and Sonnewald, U. (2010) Comparative transcriptome analysis coupled to X-ray CT reveals sucrose supply and growth velocity as major determinants of potato tuber starch biosynthesis. BMC Genomics 11: 93.
    • (2010) BMC Genomics , vol.11 , pp. 93
    • Ferreira, S.J.1    Senninh, M.2    Sonnewald, S.3    Kessling, P.4    Goldstein, R.5    Sonnewald, U.6
  • 20
    • 75149117810 scopus 로고    scopus 로고
    • Hypoxia inducible factors regulate pluripo-tency and proliferation in human embryonic stem cells cultured at reduced oxygen tensions
    • Forristal, C.E., Wright, K.L., Hanley, N.A., Oreffo, R.O. and Houghton, F.D. (2010) Hypoxia inducible factors regulate pluripo-tency and proliferation in human embryonic stem cells cultured at reduced oxygen tensions. Reproduction 139: 85-97.
    • (2010) Reproduction , vol.139 , pp. 85-97
    • Forristal, C.E.1    Wright, K.L.2    Hanley, N.A.3    Oreffo, R.O.4    Houghton, F.D.5
  • 21
    • 0029360594 scopus 로고
    • Sink-and vascular-associated sucrose synthase functions are encoded by different gene classes in potato
    • Fu, H. and Park, W.D. (1995) Sink-and vascular-associated sucrose synthase functions are encoded by different gene classes in potato. Plant Cell 7: 1369-1385.
    • (1995) Plant Cell , vol.7 , pp. 1369-1385
    • Fu, H.1    Park, W.D.2
  • 22
    • 0029360788 scopus 로고
    • 0flanking sequences and the leader intron
    • Fu, H., Kim, S.Y. and Park, W.D. (1995) High-leve1 tuber expression and sucrose inducibility of a potato Sus4 sucrose synthase gene require 50 and 30 flanking sequences and the leader intron. Plant Cell 7: 1387-1394.
    • (1995) Plant Cell , vol.7 , pp. 1387-1394
    • Fu, H.1    Kim, S.Y.2    Park, W.D.3
  • 23
    • 55949104210 scopus 로고    scopus 로고
    • Submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellin responses in rice
    • Fukao, T. and Bailey-Serres, J. (2008) Submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellin responses in rice. Proc. Natl Acad. Sci. USA 105: 16814-16819.
    • (2008) Proc. Natl Acad. Sci. USA , vol.105 , pp. 16814-16819
    • Fukao, T.1    Bailey-Serres, J.2
  • 24
    • 33747496374 scopus 로고    scopus 로고
    • A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice
    • DOI 10.1105/tpc.106.043000
    • Fukao, T., Xu, K., Ronald, P.C. and Bailey-Serres, J. (2006) A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice. Plant Cell 18: 2021-2034. (Pubitemid 44260194)
    • (2006) Plant Cell , vol.18 , Issue.8 , pp. 2021-2034
    • Fukao, T.1    Xu, K.2    Ronald, P.C.3    Bailey-Serres, J.4
  • 25
    • 0037795742 scopus 로고    scopus 로고
    • Response of plant metabolism to too little oxygen
    • DOI 10.1016/S1369-5266(03)00038-4
    • Geigenberger, P. (2003a) Response of plant metabolism to too little oxygen. Curr. Opin. Plant Biol. 6: 247-256. (Pubitemid 36704510)
    • (2003) Current Opinion in Plant Biology , vol.6 , Issue.3 , pp. 247-256
    • Geigenberger, P.1
  • 26
    • 0037241320 scopus 로고    scopus 로고
    • Regulation of sucrose to starch conversion in growing potato tubers
    • DOI 10.1093/jxb/erg074
    • Geigenberger, P. (2003b) Regulation of sucrose to starch conversion in growing potato tubers. J. Exp. Bot. 54: 457-465. (Pubitemid 36122041)
    • (2003) Journal of Experimental Botany , vol.54 , Issue.382 , pp. 457-465
    • Geigenberger, P.1
  • 27
    • 0033832777 scopus 로고    scopus 로고
    • Metabolic activity decreases as an adaptive response to low internal oxygen in growing potato tubers
    • Geigenberger, P., Fernie, A.R., Gibon, Y., Christ, M. and Stitt, M. (2000) Metabolic activity decreases as an adaptive response to low internal oxygen in growing potato tubers. Biol. Chem. 381: 723-740.
    • (2000) Biol. Chem , vol.381 , pp. 723-740
    • Geigenberger, P.1    Fernie, A.R.2    Gibon, Y.3    Christ, M.4    Stitt, M.5
  • 28
    • 69149109855 scopus 로고    scopus 로고
    • The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water
    • Hattori, Y., Nagai, K., Furukawa, S., Song, S.J., Kawano, R., Sakakibara, H. et al. (2009) The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water. Nature 460: 1026-1030.
    • (2009) Nature , vol.460 , pp. 1026-1030
    • Hattori, Y.1    Nagai, K.2    Furukawa, S.3    Song, S.J.4    Kawano, R.5    Sakakibara, H.6
  • 29
    • 79954593092 scopus 로고    scopus 로고
    • Arabidopsis RAP2.2: An ethylene response transcription factor that is important for hypoxia survival
    • Hinz, M., Wilson, I.W., Yang, J., Buerstenbinder, K., Llewellyn, D., Dennis, E.S. et al. (2010) Arabidopsis RAP2.2: an ethylene response transcription factor that is important for hypoxia survival. Plant Physiol. 144: 218-231.
    • (2010) Plant Physiol , vol.144 , pp. 218-231
    • Hinz, M.1    Wilson, I.W.2    Yang, J.3    Buerstenbinder, K.4    Llewellyn, D.5    Dennis, E.S.6
  • 30
    • 0345275236 scopus 로고
    • Soil oxygen and moisture in relation to Russet Burbank potato yield and quality
    • Holder, C.B. and Cary, J.W. (1984) Soil oxygen and moisture in relation to Russet Burbank potato yield and quality. Amer. J. Potato Res. 61: 67-75.
    • (1984) Amer. J. Potato Res , vol.61 , pp. 67-75
    • Holder, C.B.1    Cary, J.W.2
  • 32
    • 48749092333 scopus 로고    scopus 로고
    • Ectopic expression of pepper CaPF1 in potato enhances multiple stresses tolerance and delays initiation of in vitro tuberization
    • Jung, W.Y., Jae, H.J., Doil, C., So, Y.Y., Joung, H. and Hyun, S.K. (2008) Ectopic expression of pepper CaPF1 in potato enhances multiple stresses tolerance and delays initiation of in vitro tuberization. Planta 228: 701-708.
    • (2008) Planta , vol.228 , pp. 701-708
    • Jung, W.Y.1    Jae, H.J.2    Doil, C.3    So, Y.Y.4    Joung, H.5    Hyun, S.K.6
  • 33
    • 52349121875 scopus 로고    scopus 로고
    • Genes driving potato tuber initiation and growth: Identification based on transcriptional changes using the POCI array
    • Kloosterman, B., De Koeyer, D., Griffiths, R., Flinn, B, Steuernagel, B., Scholz, U. et al. (2008) Genes driving potato tuber initiation and growth: identification based on transcriptional changes using the POCI array. Funct. Integr. Genomics 8: 329-340.
    • (2008) Funct. Integr. Genomics , vol.8 , pp. 329-340
    • Kloosterman, B.1    De Koeyer, D.2    Griffiths, R.3    Flinn, B.4    Steuernagel, B.5    Scholz, U.6
  • 34
    • 35148821839 scopus 로고    scopus 로고
    • StGA2ox1 is induced prior to stolon swelling and controls GA levels during potato tuber development
    • DOI 10.1111/j.1365-313X.2007.03245.x
    • Kloosterman, B., Navarro, C., Bijsterbosch, G., Lange, T., Prat, S., Visser, R.G. et al. (2007) StGA2ox1 is induced prior to stolon swelling and controls GA levels during potato tuber development. Plant J. 52: 362-373. (Pubitemid 47537590)
    • (2007) Plant Journal , vol.52 , Issue.2 , pp. 362-373
    • Kloosterman, B.1    Navarro, C.2    Bijsterbosch, G.3    Lange, T.4    Prat, S.5    Visser, R.G.F.6    Bachem, C.W.B.7
  • 36
    • 77449150559 scopus 로고    scopus 로고
    • Coordinated responses to oxygen and sugar deficiency allow rice seedlings to tolerate flooding
    • Lee, K.W., Chen, P.-W., Lu, C.-A., Chen, S., Ho, T.-H.D. and Yu, S.-M. (2009) Coordinated responses to oxygen and sugar deficiency allow rice seedlings to tolerate flooding. Sci. Signal. 2: ra61.
    • (2009) Sci. Signal , vol.2
    • Lee, K.W.1    Chen, P.-W.2    Lu, C.-A.3    Chen, S.4    Ho, T.-H.D.5    Yu, S.-M.6
  • 37
    • 58149194624 scopus 로고    scopus 로고
    • SMART 6: Recent updates and new developments
    • Letunic, I., Doerks, T. and Bork, P. (2009) SMART 6: recent updates and new developments. Nucl. Acids Res. 37: D229-D232.
    • (2009) Nucl. Acids Res , vol.37
    • Letunic, I.1    Doerks, T.2    Bork, P.3
  • 38
    • 78650271190 scopus 로고    scopus 로고
    • Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera
    • Licausi, F., Giorgi, F.M., Zenoni, S., Osti, F., Pezzotti, M. and Perata, P. (2010a) Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera. BMC Genomics 11: 719.
    • (2010) BMC Genomics , vol.11 , pp. 719
    • Licausi, F.1    Giorgi, F.M.2    Zenoni, S.3    Osti, F.4    Pezzotti, M.5    Perata, P.6
  • 39
    • 77951988135 scopus 로고    scopus 로고
    • HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana
    • Licausi, F., Van Dongen, J.T., Giuntoli, B., Novi, G., Santaniello, A., Geigenberger, P. et al. (2010b) HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana. Plant J. 62: 302-315.
    • (2010) Plant J , vol.62 , pp. 302-315
    • Licausi, F.1    Van Dongen, J.T.2    Giuntoli, B.3    Novi, G.4    Santaniello, A.5    Geigenberger, P.6
  • 40
    • 33645232234 scopus 로고    scopus 로고
    • New challenges in biophotonics: Laser-based fluoroimmuno analysis and in vivo optical oxygen monitoring
    • Löhmannsröben, H.-G., Beck, M., Hildebrandt, N., Schmälzlin, E. and van Dongen, J.T. (2005) New challenges in biophotonics: laser-based fluoroimmuno analysis and in vivo optical oxygen monitoring. Proceedings SPIE 6157, 61570E.
    • (2005) Proceedings SPIE , vol.6157
    • Löhmannsröben, H.-G.1    Beck, M.2    Hildebrandt, N.3    Schmälzlin, E.4    Van Dongen, J.T.5
  • 41
    • 0000248856 scopus 로고
    • Composition of gases in intercellular spaces of apples and potatoes
    • Magness, J.R. (1920) Composition of gases in intercellular spaces of apples and potatoes. Bot. Gaz. 70: 308-316.
    • (1920) Bot. Gaz , vol.70 , pp. 308-316
    • Magness, J.R.1
  • 42
    • 0025429255 scopus 로고
    • Alcohol dehydro-genase gene expression in potato following elicitor and stress treatment
    • Matton, D.P., Constabel, P. and Brisson, N. (1990) Alcohol dehydro-genase gene expression in potato following elicitor and stress treatment. Plant Mol. Biol. 14: 775-783.
    • (1990) Plant Mol. Biol , vol.14 , pp. 775-783
    • Matton, D.P.1    Constabel, P.2    Brisson, N.3
  • 43
    • 0027137266 scopus 로고
    • Changes of carbohydrates, metabolites and enzyme activities in potato tubers during development, and within a single tuber along a stolon-apex gradient
    • Merlo, L., Geigenberger, P., Hajirezaei, M. and Stitt, M. (1993) Changes of carbohydrates, metabolites and enzyme activities in potato tubers during development, and within a single tuber along a stolon-apex gradient. J. Plant Physiol. 142: 392-402. (Pubitemid 2002011)
    • (1993) Journal of Plant Physiology , vol.142 , Issue.4 , pp. 392-402
    • Merlo, L.1    Geigenberger, P.2    Hajirezaei, M.3    Stitt, M.4
  • 44
    • 0037267986 scopus 로고    scopus 로고
    • CIP353 encodes an AP2/ERF-domain protein in potato (Solanum tuberosum L.) and responds slowly to cold stress
    • DOI 10.1093/pcp/pcg004
    • Mine, T., Hiyoshi, T., Kasaoka, K. and Ohyama, A. (2003) CIP353 encodes an AP2/ERF-domain protein in potato (Solanum tubero-sum L.) and responds slowly to cold stress. Plant Cell Physiol. 44: 10-15. (Pubitemid 36198981)
    • (2003) Plant and Cell Physiology , vol.44 , Issue.1 , pp. 10-15
    • Mine, T.1    Hiyoshi, T.2    Kasaoka, K.3    Ohyama, A.4
  • 45
    • 77949535960 scopus 로고    scopus 로고
    • Cross-Kingdom comparison of transcriptomic adjustments to low-oxygen stress highlights conserved and plant-specific re sponses
    • Mustroph, A., Lee, S.C., Oosumi, T., Zanetti, M.A., Yang, H., Ma, K. et al. (2010) Cross-Kingdom comparison of transcriptomic adjustments to low-oxygen stress highlights conserved and plant-specific re sponses. Plant Physiol. 152: 1484-1500.
    • (2010) Plant Physiol , vol.152 , pp. 1484-1500
    • Mustroph, A.1    Lee, S.C.2    Oosumi, T.3    Zanetti, M.A.4    Yang, H.5    Ma, K.6
  • 46
    • 33646832415 scopus 로고    scopus 로고
    • Genome-wide analysis of the ERF gene family in arabidopsis and rice
    • DOI 10.1104/pp.105.073783
    • Nakano, T., Suzuki, K., Fujimura, T. and Shinshi, H. (2006) Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol. 140: 411-432. (Pubitemid 43956266)
    • (2006) Plant Physiology , vol.140 , Issue.2 , pp. 411-432
    • Nakano, T.1    Suzuki, K.2    Fujimura, T.3    Shinshi, H.4
  • 47
    • 79953034470 scopus 로고    scopus 로고
    • Comparative analysis between plant species of transcrip-tional and metabolic responses to hypoxia
    • Narsai, R., Rocha, M., Geigenberger, P., Whelan, J. and van Dongen, J.T. (2010) Comparative analysis between plant species of transcrip-tional and metabolic responses to hypoxia. New Phytol. 190: 472-487.
    • (2010) New Phytol , vol.190 , pp. 472-487
    • Narsai, R.1    Rocha, M.2    Geigenberger, P.3    Whelan, J.4    Van Dongen, J.T.5
  • 48
    • 27144456802 scopus 로고    scopus 로고
    • Housekeeping gene selection for real-time RT-PCR normalization in potato during biotic and abiotic stress
    • DOI 10.1093/jxb/eri285
    • Nicot, N., Hausman, J.F., Hoffmann, L. and Evers, D. (2005) Housekeeping gene selection for real-time RT-PCR normalization in potato during biotic and abiotic stress. J. Exp. Bot. 56: 2907-2914. (Pubitemid 41507227)
    • (2005) Journal of Experimental Botany , vol.56 , Issue.421 , pp. 2907-2914
    • Nicot, N.1    Hausman, J.-F.2    Hoffmann, L.3    Evers, D.4
  • 49
    • 33947718967 scopus 로고    scopus 로고
    • Mutual regulation of Arabidopsis thaliana ethylene-responsive element binding protein and a plant floral homeotic gene, APETALA2
    • DOI 10.1093/aob/mcl265
    • Ogawa, T., Uchimiya, H. and Kawai-Yamada, M. (2007) Mutual regulation of Arabidopsis thaliana ethylene-responsive element binding protein and a plant floral homeotic gene, APETALA. Ann. Bot. 99: 239-244. (Pubitemid 47355907)
    • (2007) Annals of Botany , vol.99 , Issue.2 , pp. 239-244
    • Ogawa, T.1    Uchimiya, H.2    Kawai-Yamada, M.3
  • 50
    • 48549102479 scopus 로고    scopus 로고
    • Functional identification of Arabidopsis stress regulatory genes using the controlled cDNA overexpression system
    • DOI 10.1104/pp.108.116897
    • Papdi, C., Ábrahám, E., Joseph, M.P., Popescu, C., Koncz, C. and Szabados, L. (2008) Functional identification of Arabidopsis stress regulatory genes using the controlled cDNA overexpression system. Plant Physiol. 147: 528-542. (Pubitemid 352844299)
    • (2008) Plant Physiology , vol.147 , Issue.2 , pp. 528-542
    • Papdi, C.1    Abraham, E.2    Joseph, M.P.3    Popescu, C.4    Koncz, C.5    Szabados, L.6
  • 52
    • 79960917261 scopus 로고    scopus 로고
    • Expression of rice SUB1A and SUB1C transcription factors in Arabidopsis uncovers flowering inhibition as a submergence-tolerance mechanism
    • Peña-Castro, J.M., van Zanten, M., Lee, S.C., Patel, M.R., Voesenek, L.A., Fukao, T. et al. (2011) Expression of rice SUB1A and SUB1C transcription factors in Arabidopsis uncovers flowering inhibition as a submergence-tolerance mechanism. Plant J. 67: 434-446.
    • (2011) Plant J. , vol.67 , pp. 434-446
    • Peña-Castro, J.M.1    Van Zanten, M.2    Lee, S.C.3    Patel, M.R.4    Voesenek, L.A.5    Fukao, T.6
  • 53
    • 0000833650 scopus 로고
    • Effect of anoxia on the induction of a-amylase in cereal seeds
    • Perata, P., Geshi, N., Yamaguchi, J. and Akazawa, T. (1993) Effect of anoxia on the induction of a-amylase in cereal seeds. Planta 191: 402-408.
    • (1993) Planta , vol.191 , pp. 402-408
    • Perata, P.1    Geshi, N.2    Yamaguchi, J.3    Akazawa, T.4
  • 54
    • 33745947900 scopus 로고    scopus 로고
    • Seasonal control of tuberization in potato: Conserved elements with the flowering response
    • DOI 10.1146/annurev.arplant.57.032905.105224
    • Rodríguez-Falcón, M., Bou, J. and Prat, S. (2006) Seasonal control of tuberization in potato: conserved elements with the flowering response. Annu. Rev. Plant Biol. 57: 151-180. (Pubitemid 44061022)
    • (2006) Annual Review of Plant Biology , vol.57 , pp. 151-180
    • Rodriguez-Falcon, M.1    Bou, J.2    Prat, S.3
  • 55
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. and Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 57
    • 0034486632 scopus 로고    scopus 로고
    • Sugar-induced signal transduction in plants
    • Smeekens, S. (2000) Sugar-induced signal transduction in plants. Plant Mol. Biol. 51: 49-81.
    • (2000) Plant Mol. Biol , vol.51 , pp. 49-81
    • Smeekens, S.1
  • 59
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • DOI 10.1093/molbev/msm092
    • Tamura, K., Dudley, J., Nei, M. and Kumar, S. (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599. (Pubitemid 47236692)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 60
    • 85194972808 scopus 로고    scopus 로고
    • Regression shrinkage and selection via the lasso
    • Tibshirani, R. (1996) Regression shrinkage and selection via the lasso. J. R. Statist. Soc. B 58: 267-288.
    • (1996) J. R. Statist. Soc B , vol.58 , pp. 267-288
    • Tibshirani, R.1
  • 61
    • 70449115789 scopus 로고    scopus 로고
    • Coexpression tools for plant biology: Opportunities for hypothesis generation and caveats
    • Usadel, B., Obayashi, T., Mutwil, M., Giorgi, F.M., Bassel, G.W., Tanimoto, M. et al. (2009a) Coexpression tools for plant biology: opportunities for hypothesis generation and caveats. Plant Cell Environ. 32: 1633-1651.
    • (2009) Plant Cell Environ , vol.32 , pp. 1633-1651
    • Usadel, B.1    Obayashi, T.2    Mutwil, M.3    Giorgi, F.M.4    Bassel, G.W.5    Tanimoto, M.6
  • 62
    • 68249092895 scopus 로고    scopus 로고
    • A guide to using MapMan to visualize and compare Omics data in plants: A case study in the crop species, maize
    • Usadel, B., Poree, F., Nagel, A., Lohse, M., Czedik-Eysenberg, A. and Stitt, M. (2009b) A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, maize. Plant Cell Environ. 32: 1211-1229.
    • (2009) Plant Cell Environ , vol.32 , pp. 1211-1229
    • Usadel, B.1    Poree, F.2    Nagel, A.3    Lohse, M.4    Czedik-Eysenberg, A.5    Stitt, M.6
  • 63
    • 3543022128 scopus 로고    scopus 로고
    • Phloem import and storage metabolism are highly coordinated by the low oxygen concentrations within developing wheat seeds
    • DOI 10.1104/pp.104.040980
    • van Dongen, J.T., Roeb, G.W., Dautzenberg, M., Froehlich, A., Vigeolas, H., Minchin, P.E.H. et al. (2004) Phloem import and storage metabolism are highly coordinated by the low oxygen concentrations within developing wheat seeds. Plant Physiol. 135: 1809-1821. (Pubitemid 39009421)
    • (2004) Plant Physiology , vol.135 , Issue.3 , pp. 1809-1821
    • Van Dongen, J.T.1    Roeb, G.W.2    Dautzenberg, M.3    Froehlich, A.4    Vigeolas, H.5    Minchin, P.E.H.6    Geigenberger, P.7
  • 64
    • 0344942509 scopus 로고    scopus 로고
    • Phloem metabolism and function have to cope with low internal oxygen
    • DOI 10.1104/pp.102.017202
    • van Dongen, J.T., Schurr, U., Pfister, M. and Geigenberger, P. (2003) Phloem metabolism and function have to cope with low internal oxygen. Plant Physiol. 131: 1529-1543. (Pubitemid 36463583)
    • (2003) Plant Physiology , vol.131 , Issue.4 , pp. 1529-1543
    • Van Dongen, J.T.1    Schurr, U.2    Pfister, M.3    Geigenberger, P.4
  • 65
    • 65449188232 scopus 로고    scopus 로고
    • Jalview Version 2-a multiple sequence alignment editor and analysis workbench
    • Waterhouse, A.M., Procter, J.B., Martin, D.M.A., Clamp, M. and Barton, G.J. (2009) Jalview Version 2-a multiple sequence alignment editor and analysis workbench. Bioinformatics 25: 1189-1191.
    • (2009) Bioinformatics , vol.25 , pp. 1189-1191
    • Waterhouse, A.M.1    Procter, J.B.2    Martin, D.M.A.3    Clamp, M.4    Barton, G.J.5
  • 66
    • 0031000565 scopus 로고    scopus 로고
    • Sugar import and metabolism during seed development
    • DOI 10.1016/S1360-1385(97)01030-3
    • Weber, H., Borisjuk, L. and Wobus, U. (1997) Sugar import and metabolism during seed development. Trends Plant Sci. 2: 169-174. (Pubitemid 27186089)
    • (1997) Trends in Plant Science , vol.2 , Issue.5 , pp. 169-174
    • Weber, H.1    Borisjuk, L.2    Wobus, U.3
  • 68
    • 0001619749 scopus 로고    scopus 로고
    • The role of gibberellin, abscisic acid, and sucrose in the regulation of potato tuber formation in vitro
    • Xu, X., van Lammeren, A.A.M., Vermeer, E. and Vreugdenhil, D. (1998) The role of gibberellin, abscisic acid, and sucrose in the regulation of potato tuber formation in vitro. Plant Physiol. 117: 575-584. (Pubitemid 128652830)
    • (1998) Plant Physiology , vol.117 , Issue.2 , pp. 575-584
    • Xu, X.1    Van Lammeren, A.A.M.2    Vermeer, E.3    Vreugdenhil, D.4
  • 69
    • 48749092333 scopus 로고    scopus 로고
    • Ectopic expression of pepper CaPF1 in potato enhances nultiple stresses tolerance and delays initiation of in vitro tuberization
    • Youm, J.W., Jeon, J.H., Choi, D., Yi, S.Y., Joung, H. and Kim, H.S. (2008) Ectopic expression of pepper CaPF1 in potato enhances nultiple stresses tolerance and delays initiation of in vitro tuberization. Planta 228: 701-708.
    • (2008) Planta , vol.228 , pp. 701-708
    • Youm, J.W.1    Jeon, J.H.2    Choi, D.3    Yi, S.Y.4    Joung, H.5    Kim, H.S.6
  • 70
    • 0001895697 scopus 로고
    • Evolutionary dvergence and convergence in proteins
    • Edited by Bryson, W. and Vogel, H.J. Academic Press, New York
    • Zuckerlandl, E. and Pauling, L. (1965) Evolutionary dvergence and convergence in proteins. In Evolving Genes and Protein. Edited by Bryson, W. and Vogel, H.J. pp. 97-166. Academic Press, New York.
    • (1965) Evolving Genes and Protein , pp. 97-166
    • Zuckerlandl, E.1    Pauling, L.2


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