-
1
-
-
60149091189
-
Regulation of translation initiation in eukaryotes: Mechanisms and biological targets
-
Sonenberg, N. and Hinnebusch, A.G. (2009) Regulation of translation initiation in eukaryotes: mechanisms and biological targets. Cell, 136, 731-745.
-
(2009)
Cell
, vol.136
, pp. 731-745
-
-
Sonenberg, N.1
Hinnebusch, A.G.2
-
2
-
-
42749086185
-
The impact of RNA structure on picornavirus IRES activity
-
Martinez-Salas, E. (2008) The impact of RNA structure on picornavirus IRES activity. Trends Microbiol., 16, 230-237.
-
(2008)
Trends Microbiol.
, vol.16
, pp. 230-237
-
-
Martinez-Salas, E.1
-
3
-
-
78649375395
-
Translational regulation of gene expression during conditions of cell stress
-
Spriggs, K.A., Bushell, M. and Willis, A.E. (2010) Translational regulation of gene expression during conditions of cell stress. Mol. Cell, 40, 228-237.
-
(2010)
Mol. Cell
, vol.40
, pp. 228-237
-
-
Spriggs, K.A.1
Bushell, M.2
Willis, A.E.3
-
4
-
-
37849021316
-
TRNA-mRNA mimicry drives translation initiation from a viral IRES
-
Costantino, D.A., Pfingsten, J.S., Rambo, R.P. and Kieft, J.S. (2008) tRNA-mRNA mimicry drives translation initiation from a viral IRES. Nat. Struct. Mol. Biol., 15, 57-64.
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, pp. 57-64
-
-
Costantino, D.A.1
Pfingsten, J.S.2
Rambo, R.P.3
Kieft, J.S.4
-
5
-
-
80051778062
-
Activity of the human immunodeficiency virus type 1 cell cycle-dependent internal ribosomal entry site is modulated by IRES trans-acting factors
-
April 10; epub ahead of print; doi:10.1093/nar/gkr189
-
Vallejos, M., Deforges, J., Plank, T.D., Letelier, A., Ramdohr, P., Abraham, C.G., Valiente-Echeverria, F., Kieft, J.S., Sargueil, B. and Lopez-Lastra, M. (2011) Activity of the human immunodeficiency virus type 1 cell cycle-dependent internal ribosomal entry site is modulated by IRES trans-acting factors. Nucleic Acids Res., April 10; epub ahead of print; doi:10.1093/nar/gkr189.
-
(2011)
Nucleic Acids Res.
-
-
Vallejos, M.1
Deforges, J.2
Plank, T.D.3
Letelier, A.4
Ramdohr, P.5
Abraham, C.G.6
Valiente-Echeverria, F.7
Kieft, J.S.8
Sargueil, B.9
Lopez-Lastra, M.10
-
6
-
-
33845361023
-
Structure of the ribosome-bound cricket paralysis virus IRES RNA
-
Schuler, M., Connell, S.R., Lescoute, A., Giesebrecht, J., Dabrowski, M., Schroeer, B., Mielke, T., Penczek, P.A., Westhof, E. and Spahn, C.M. (2006) Structure of the ribosome-bound cricket paralysis virus IRES RNA. Nat. Struct. Mol. Biol., 13, 1092-1096.
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 1092-1096
-
-
Schuler, M.1
Connell, S.R.2
Lescoute, A.3
Giesebrecht, J.4
Dabrowski, M.5
Schroeer, B.6
Mielke, T.7
Penczek, P.A.8
Westhof, E.9
Spahn, C.M.10
-
7
-
-
49449093122
-
Eukaryotic translation initiation machinery can operate in a bacterial-like mode without eIF2
-
Terenin, I.M., Dmitriev, S.E., Andreev, D.E. and Shatsky, I.N. (2008) Eukaryotic translation initiation machinery can operate in a bacterial-like mode without eIF2. Nat. Struct. Mol. Biol., 15, 836-841.
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, pp. 836-841
-
-
Terenin, I.M.1
Dmitriev, S.E.2
Andreev, D.E.3
Shatsky, I.N.4
-
8
-
-
79953700874
-
A conserved structure within the HIV gag open reading frame that controls translation initiation directly recruits the 40S subunit and eIF3
-
Locker, N., Chamond, N. and Sargueil, B. (2011) A conserved structure within the HIV gag open reading frame that controls translation initiation directly recruits the 40S subunit and eIF3. Nucleic Acids Res., 39, 2367-2377.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 2367-2377
-
-
Locker, N.1
Chamond, N.2
Sargueil, B.3
-
9
-
-
10744229009
-
Structural organization of a viral IRES depends on the integrity of the GNRA motif
-
Fernandez-Miragall, O. and Martinez-Salas, E. (2003) Structural organization of a viral IRES depends on the integrity of the GNRA motif. RNA, 9, 1333-1344.
-
(2003)
RNA
, vol.9
, pp. 1333-1344
-
-
Fernandez-Miragall, O.1
Martinez-Salas, E.2
-
10
-
-
70449717470
-
Conserved functional domains and a novel tertiary interaction near the pseudoknot drive translational activity of hepatitis C virus and hepatitis C virus-like internal ribosome entry sites
-
Easton, L.E., Locker, N. and Lukavsky, P.J. (2009) Conserved functional domains and a novel tertiary interaction near the pseudoknot drive translational activity of hepatitis C virus and hepatitis C virus-like internal ribosome entry sites. Nucleic Acids Res., 37, 5537-5549.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 5537-5549
-
-
Easton, L.E.1
Locker, N.2
Lukavsky, P.J.3
-
11
-
-
78650271083
-
An RNA G-quadruplex is essential for cap-independent translation initiation in human VEGF IRES
-
Morris, M.J., Negishi, Y., Pazsint, C., Schonhoft, J.D. and Basu, S. (2010) An RNA G-quadruplex is essential for cap-independent translation initiation in human VEGF IRES. J. Am. Chem. Soc., 132, 17831-17839.
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 17831-17839
-
-
Morris, M.J.1
Negishi, Y.2
Pazsint, C.3
Schonhoft, J.D.4
Basu, S.5
-
12
-
-
38649085954
-
Tertiary interactions determine the accuracy of RNA folding
-
Chauhan, S. and Woodson, S.A. (2008) Tertiary interactions determine the accuracy of RNA folding. J. Am. Chem. Soc., 130, 1296-1303.
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 1296-1303
-
-
Chauhan, S.1
Woodson, S.A.2
-
13
-
-
76549124254
-
Solution structure of the cap-independent translational enhancer and ribosome-binding element in the 30 UTR of turnip crinkle virus
-
Zuo, X., Wang, J., Yu, P., Eyler, D., Xu, H., Starich, M.R., Tiede, D.M., Simon, A.E., Kasprzak, W., Schwieters, C.D. et al. (2010) Solution structure of the cap-independent translational enhancer and ribosome-binding element in the 30 UTR of turnip crinkle virus. Proc. Natl Acad. Sci. USA, 107, 1385-1390.
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 1385-1390
-
-
Zuo, X.1
Wang, J.2
Yu, P.3
Eyler, D.4
Xu, H.5
Starich, M.R.6
Tiede, D.M.7
Simon, A.E.8
Kasprzak, W.9
Schwieters, C.D.10
-
14
-
-
62049083223
-
A complex gene regulatory mechanism that operates at the nexus of multiple RNA processing decisions
-
McPheeters, D.S., Cremona, N., Sunder, S., Chen, H.M., Averbeck, N., Leatherwood, J. and Wise, J.A. (2009) A complex gene regulatory mechanism that operates at the nexus of multiple RNA processing decisions. Nat. Struct. Mol. Biol., 16, 255-264.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 255-264
-
-
McPheeters, D.S.1
Cremona, N.2
Sunder, S.3
Chen, H.M.4
Averbeck, N.5
Leatherwood, J.6
Wise, J.A.7
-
15
-
-
71849086639
-
De novo prediction of structured RNAs from genomic sequences
-
Gorodkin, J., Hofacker, I.L., Torarinsson, E., Yao, Z., Havgaard, J.H. and Ruzzo, W.L. (2010) De novo prediction of structured RNAs from genomic sequences. Trends Biotechnol., 28, 9-19.
-
(2010)
Trends Biotechnol.
, vol.28
, pp. 9-19
-
-
Gorodkin, J.1
Hofacker, I.L.2
Torarinsson, E.3
Yao, Z.4
Havgaard, J.H.5
Ruzzo, W.L.6
-
16
-
-
84934442235
-
Virus evolution as a tool to study HIV-1 biology
-
Berkhout, B. and Das, A.T. (2009) Virus evolution as a tool to study HIV-1 biology. Methods Mol. Biol., 485, 436-451.
-
(2009)
Methods Mol. Biol.
, vol.485
, pp. 436-451
-
-
Berkhout, B.1
Das, A.T.2
-
17
-
-
0029027606
-
Variation of the hepatitis C virus 5 non-coding region: Implications for secondary structure, virus detection and typing
-
The International HCV Collaborative Study Group
-
Smith, D.B., Mellor, J., Jarvis, L.M., Davidson, F., Kolberg, J., Urdea, M., Yap, P.L. and Simmonds, P. (1995) Variation of the hepatitis C virus 5 non-coding region: implications for secondary structure, virus detection and typing. The International HCV Collaborative Study Group. J. Gen. Virol., 76 (Pt 7), 1749-1761.
-
(1995)
J. Gen. Virol.
, vol.76
, Issue.PART 7
, pp. 1749-1761
-
-
Smith, D.B.1
Mellor, J.2
Jarvis, L.M.3
Davidson, F.4
Kolberg, J.5
Urdea, M.6
Yap, P.L.7
Simmonds, P.8
-
18
-
-
0026589151
-
Foot-and-mouth disease virus populations are quasispecies
-
Domingo, E., Escarmis, C., Martinez, M.A., Martinez-Salas, E. and Mateu, M.G. (1992) Foot-and-mouth disease virus populations are quasispecies. Curr. Top Microbiol. Immunol., 176, 33-47.
-
(1992)
Curr. Top Microbiol. Immunol.
, vol.176
, pp. 33-47
-
-
Domingo, E.1
Escarmis, C.2
Martinez, M.A.3
Martinez-Salas, E.4
Mateu, M.G.5
-
19
-
-
33749069918
-
The 30 end of the foot-and-mouth disease virus genome establishes two distinct long-range RNA-RNA interactions with the 50 end region
-
Serrano, P., Pulido, M.R., Saiz, M. and Martinez-Salas, E. (2006) The 30 end of the foot-and-mouth disease virus genome establishes two distinct long-range RNA-RNA interactions with the 50 end region. J. Gen. Virol., 87, 3013-3022.
-
(2006)
J. Gen. Virol.
, vol.87
, pp. 3013-3022
-
-
Serrano, P.1
Pulido, M.R.2
Saiz, M.3
Martinez-Salas, E.4
-
20
-
-
67349196058
-
Rescue of internal initiation of translation by RNA complementation provides evidence for a distribution of functions between individual IRES domains
-
Serrano, P., Ramajo, J. and Martinez-Salas, E. (2009) Rescue of internal initiation of translation by RNA complementation provides evidence for a distribution of functions between individual IRES domains. Virology, 388, 221-229.
-
(2009)
Virology
, vol.388
, pp. 221-229
-
-
Serrano, P.1
Ramajo, J.2
Martinez-Salas, E.3
-
21
-
-
42449114149
-
New insights into internal ribosome entry site elements relevant for viral gene expression
-
Martinez-Salas, E., Pacheco, A., Serrano, P. and Fernandez, N. (2008) New insights into internal ribosome entry site elements relevant for viral gene expression. J. Gen. Virol., 89, 611-626.
-
(2008)
J. Gen. Virol.
, vol.89
, pp. 611-626
-
-
Martinez-Salas, E.1
Pacheco, A.2
Serrano, P.3
Fernandez, N.4
-
22
-
-
34447530523
-
Differential factor requirement to assemble translation initiation complexes at the alternative start codons of foot-and-mouth disease virus RNA
-
Andreev, D.E., Fernandez-Miragall, O., Ramajo, J., Dmitriev, S.E., Terenin, I.M., Martinez-Salas, E. and Shatsky, I.N. (2007) Differential factor requirement to assemble translation initiation complexes at the alternative start codons of foot-and-mouth disease virus RNA. RNA, 13, 1366-1374.
-
(2007)
RNA
, vol.13
, pp. 1366-1374
-
-
Andreev, D.E.1
Fernandez-Miragall, O.2
Ramajo, J.3
Dmitriev, S.E.4
Terenin, I.M.5
Martinez-Salas, E.6
Shatsky, I.N.7
-
23
-
-
0034852292
-
IRES interaction with translation initiation factors: Functional characterization of novel RNA contacts with eIF3, eIF4B, and eIF4GII
-
Lopez de Quinto, S., Lafuente, E. and Martinez-Salas, E. (2001) IRES interaction with translation initiation factors: functional characterization of novel RNA contacts with eIF3, eIF4B, and eIF4GII. RNA, 7, 1213-1226.
-
(2001)
RNA
, vol.7
, pp. 1213-1226
-
-
Lopez De Quinto, S.1
Lafuente, E.2
Martinez-Salas, E.3
-
24
-
-
59649126267
-
A novel role for Gemin5 in mRNA translation
-
Pacheco, A., Lopez de Quinto, S., Ramajo, J., Fernandez, N. and Martinez-Salas, E. (2009) A novel role for Gemin5 in mRNA translation. Nucleic Acids Res., 37, 582-590.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 582-590
-
-
Pacheco, A.1
Lopez De Quinto, S.2
Ramajo, J.3
Fernandez, N.4
Martinez-Salas, E.5
-
25
-
-
59749086877
-
Relevance of RNA structure for the activity of picornavirus IRES elements
-
Fernandez-Miragall, O., Lopez de Quinto, S. and Martinez-Salas, E. (2009) Relevance of RNA structure for the activity of picornavirus IRES elements. Virus Res., 139, 172-182.
-
(2009)
Virus Res.
, vol.139
, pp. 172-182
-
-
Fernandez-Miragall, O.1
Lopez De Quinto, S.2
Martinez-Salas, E.3
-
26
-
-
55849150550
-
Riboproteomic analysis of polypeptides interacting with the internal ribosome-entry site element of foot-and-mouth disease viral RNA
-
Pacheco, A., Reigadas, S. and Martinez-Salas, E. (2008) Riboproteomic analysis of polypeptides interacting with the internal ribosome-entry site element of foot-and-mouth disease viral RNA. Proteomics, 8, 4782-4790.
-
(2008)
Proteomics
, vol.8
, pp. 4782-4790
-
-
Pacheco, A.1
Reigadas, S.2
Martinez-Salas, E.3
-
27
-
-
0030999946
-
Conserved structural motifs located in distal loops of aphthovirus internal ribosome entry site domain 3 are required for internal initiation of translation
-
Lopez de Quinto, S. and Martinez-Salas, E. (1997) Conserved structural motifs located in distal loops of aphthovirus internal ribosome entry site domain 3 are required for internal initiation of translation. J. Virol., 71, 4171-4175.
-
(1997)
J. Virol.
, vol.71
, pp. 4171-4175
-
-
Lopez De Quinto, S.1
Martinez-Salas, E.2
-
28
-
-
0032863246
-
A selection system for functional internal ribosome entry site (IRES) elements: Analysis of the requirement for a conserved GNRA tetraloop in the encephalomyocarditis virus IRES
-
Robertson, M.E., Seamons, R.A. and Belsham, G.J. (1999) A selection system for functional internal ribosome entry site (IRES) elements: analysis of the requirement for a conserved GNRA tetraloop in the encephalomyocarditis virus IRES. RNA, 5, 1167-1179.
-
(1999)
RNA
, vol.5
, pp. 1167-1179
-
-
Robertson, M.E.1
Seamons, R.A.2
Belsham, G.J.3
-
29
-
-
0030061153
-
Identification of an essential region for internal initiation of translation in the aphthovirus internal ribosome entry site and implications for viral evolution
-
Martinez-Salas, E., Regalado, M.P. and Domingo, E. (1996) Identification of an essential region for internal initiation of translation in the aphthovirus internal ribosome entry site and implications for viral evolution. J. Virol., 70, 992-998.
-
(1996)
J. Virol.
, vol.70
, pp. 992-998
-
-
Martinez-Salas, E.1
Regalado, M.P.2
Domingo, E.3
-
30
-
-
59749085225
-
Structure and function of HCV IRES domains
-
Lukavsky, P.J. (2009) Structure and function of HCV IRES domains. Virus Res., 139, 166-171.
-
(2009)
Virus Res.
, vol.139
, pp. 166-171
-
-
Lukavsky, P.J.1
-
31
-
-
66849089596
-
Toward a structural understanding of IRES RNA function
-
Filbin, M.E. and Kieft, J.S. (2009) Toward a structural understanding of IRES RNA function. Curr. Opin. Struct. Biol., 19, 267-276.
-
(2009)
Curr. Opin. Struct. Biol.
, vol.19
, pp. 267-276
-
-
Filbin, M.E.1
Kieft, J.S.2
-
32
-
-
16244412610
-
RNA structure analysis at single nucleotide resolution by selective 20-hydroxyl acylation and primer extension (SHAPE)
-
Merino, E.J., Wilkinson, K.A., Coughlan, J.L. and Weeks, K.M. (2005) RNA structure analysis at single nucleotide resolution by selective 20-hydroxyl acylation and primer extension (SHAPE). J. Am. Chem. Soc., 127, 4223-4231.
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 4223-4231
-
-
Merino, E.J.1
Wilkinson, K.A.2
Coughlan, J.L.3
Weeks, K.M.4
-
33
-
-
68449092202
-
Architecture and secondary structure of an entire HIV-1 RNA genome
-
Watts, J.M., Dang, K.K., Gorelick, R.J., Leonard, C.W., Bess, J.W. Jr, Swanstrom, R., Burch, C.L. and Weeks, K.M. (2009) Architecture and secondary structure of an entire HIV-1 RNA genome. Nature, 460, 711-716.
-
(2009)
Nature
, vol.460
, pp. 711-716
-
-
Watts, J.M.1
Dang, K.K.2
Gorelick, R.J.3
Leonard, C.W.4
Bess Jr., J.W.5
Swanstrom, R.6
Burch, C.L.7
Weeks, K.M.8
-
34
-
-
78650261546
-
Structural analysis provides insights into the modular organization of picornavirus IRES
-
Fernandez, N., Garcia-Sacristan, A., Ramajo, J., Briones, C. and Martinez-Salas, E. (2011) Structural analysis provides insights into the modular organization of picornavirus IRES. Virology, 409, 251-261.
-
(2011)
Virology
, vol.409
, pp. 251-261
-
-
Fernandez, N.1
Garcia-Sacristan, A.2
Ramajo, J.3
Briones, C.4
Martinez-Salas, E.5
-
35
-
-
0344980095
-
Long-range RNA interactions between structural domains of the aphthovirus internal ribosome entry site (IRES)
-
Ramos, R. and Martinez-Salas, E. (1999) Long-range RNA interactions between structural domains of the aphthovirus internal ribosome entry site (IRES). RNA, 5, 1374-1383.
-
(1999)
RNA
, vol.5
, pp. 1374-1383
-
-
Ramos, R.1
Martinez-Salas, E.2
-
36
-
-
0027289282
-
A single nucleotide substitution in the internal ribosome entry site of foot-and-mouth disease virus leads to enhanced cap-independent translation in vivo
-
Martinez-Salas, E., Saiz, J.C., Davila, M., Belsham, G.J. and Domingo, E. (1993) A single nucleotide substitution in the internal ribosome entry site of foot-and-mouth disease virus leads to enhanced cap-independent translation in vivo. J. Virol., 67, 3748-3755.
-
(1993)
J. Virol.
, vol.67
, pp. 3748-3755
-
-
Martinez-Salas, E.1
Saiz, J.C.2
Davila, M.3
Belsham, G.J.4
Domingo, E.5
-
37
-
-
33947720028
-
Selective 2-hydroxyl acylation analyzed by primer extension (SHAPE): Quantitative RNA structure analysis at single nucleotide resolution
-
Wilkinson, K.A., Merino, E.J. and Weeks, K.M. (2006) Selective 2-hydroxyl acylation analyzed by primer extension (SHAPE): quantitative RNA structure analysis at single nucleotide resolution. Nat. Protoc., 1, 1610-1616.
-
(2006)
Nat. Protoc.
, vol.1
, pp. 1610-1616
-
-
Wilkinson, K.A.1
Merino, E.J.2
Weeks, K.M.3
-
38
-
-
31044449305
-
Evidence of reciprocal tertiary interactions between conserved motifs involved in organizing RNA structure essential for internal initiation of translation
-
Fernandez-Miragall, O., Ramos, R., Ramajo, J. and Martinez-Salas, E. (2006) Evidence of reciprocal tertiary interactions between conserved motifs involved in organizing RNA structure essential for internal initiation of translation. RNA, 12, 223-234.
-
(2006)
RNA
, vol.12
, pp. 223-234
-
-
Fernandez-Miragall, O.1
Ramos, R.2
Ramajo, J.3
Martinez-Salas, E.4
-
39
-
-
0029972930
-
A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA
-
Paillart, J.C., Skripkin, E., Ehresmann, B., Ehresmann, C. and Marquet, R. (1996) A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA. Proc. Natl Acad. Sci. USA, 93, 5572-5577.
-
(1996)
Proc. Natl Acad. Sci. USA
, vol.93
, pp. 5572-5577
-
-
Paillart, J.C.1
Skripkin, E.2
Ehresmann, B.3
Ehresmann, C.4
Marquet, R.5
-
40
-
-
0025789625
-
Interaction of a cellular 57-kilodalton protein with the internal translation initiation site of foot-and-mouth disease virus
-
Luz, N. and Beck, E. (1991) Interaction of a cellular 57-kilodalton protein with the internal translation initiation site of foot-and-mouth disease virus. J. Virol., 65, 6486-6494.
-
(1991)
J. Virol.
, vol.65
, pp. 6486-6494
-
-
Luz, N.1
Beck, E.2
-
41
-
-
0033623486
-
Interaction of the eIF4G initiation factor with the aphthovirus IRES is essential for internal translation initiation in vivo
-
Lopez de Quinto, S. and Martinez-Salas, E. (2000) Interaction of the eIF4G initiation factor with the aphthovirus IRES is essential for internal translation initiation in vivo. RNA, 6, 1380-1392.
-
(2000)
RNA
, vol.6
, pp. 1380-1392
-
-
Lopez De Quinto, S.1
Martinez-Salas, E.2
-
42
-
-
0032806372
-
Differential utilization of poly(rC) binding protein 2 in translation directed by picornavirus IRES elements
-
Walter, B.L., Nguyen, J.H., Ehrenfeld, E. and Semler, B.L. (1999) Differential utilization of poly(rC) binding protein 2 in translation directed by picornavirus IRES elements. RNA, 5, 1570-1585.
-
(1999)
RNA
, vol.5
, pp. 1570-1585
-
-
Walter, B.L.1
Nguyen, J.H.2
Ehrenfeld, E.3
Semler, B.L.4
-
43
-
-
79959452628
-
Common conformational changes induced in type 2 picornavirus IRESs by cognate trans-acting factors
-
Yu, Y., Abaeva, I.S., Marintchev, A., Pestova, T.V. and Hellen, C.U. (2011) Common conformational changes induced in type 2 picornavirus IRESs by cognate trans-acting factors. Nucleic Acids Res, 39, 4851-4865.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 4851-4865
-
-
Yu, Y.1
Abaeva, I.S.2
Marintchev, A.3
Pestova, T.V.4
Hellen, C.U.5
-
44
-
-
4444253828
-
NMR studies of the structure and Mg2+binding properties of a conserved RNA motif of EMCV picornavirus IRES element
-
Phelan, M., Banks, R.J., Conn, G. and Ramesh, V. (2004) NMR studies of the structure and Mg2+binding properties of a conserved RNA motif of EMCV picornavirus IRES element. Nucleic Acids Res., 32, 4715-4724.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 4715-4724
-
-
Phelan, M.1
Banks, R.J.2
Conn, G.3
Ramesh, V.4
-
45
-
-
2442457098
-
NMR structures of loop B RNAs from the stem-loop IV domain of the enterovirus internal ribosome entry site: A single C to U substitution drastically changes the shape and flexibility of RNA
-
Du, Z., Ulyanov, N.B., Yu, J., Andino, R. and James, T.L. (2004) NMR structures of loop B RNAs from the stem-loop IV domain of the enterovirus internal ribosome entry site: a single C to U substitution drastically changes the shape and flexibility of RNA. Biochemistry, 43, 5757-5771.
-
(2004)
Biochemistry
, vol.43
, pp. 5757-5771
-
-
Du, Z.1
Ulyanov, N.B.2
Yu, J.3
Andino, R.4
James, T.L.5
-
46
-
-
0037370110
-
Common and distinctive features of GNRA tetraloops based on a GUAA tetraloop structure at 1.4 A resolution
-
Correll, C.C. and Swinger, K. (2003) Common and distinctive features of GNRA tetraloops based on a GUAA tetraloop structure at 1.4 A resolution. RNA, 9, 355-363.
-
(2003)
RNA
, vol.9
, pp. 355-363
-
-
Correll, C.C.1
Swinger, K.2
-
47
-
-
40249103230
-
Comprehensive features of natural and in vitro selected GNRA tetraloop-binding receptors
-
Geary, C., Baudrey, S. and Jaeger, L. (2008) Comprehensive features of natural and in vitro selected GNRA tetraloop-binding receptors. Nucleic Acids Res., 36, 1138-1152.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 1138-1152
-
-
Geary, C.1
Baudrey, S.2
Jaeger, L.3
-
48
-
-
78649986714
-
Promoting RNA helical stacking via A-minor junctions
-
Geary, C., Chworos, A. and Jaeger, L. (2011) Promoting RNA helical stacking via A-minor junctions. Nucleic Acids Res., 39, 1066-1080.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 1066-1080
-
-
Geary, C.1
Chworos, A.2
Jaeger, L.3
-
49
-
-
0033740772
-
Coupled nucleotide covariations reveal dynamic RNA interaction patterns
-
Gultyaev, A.P., Franch, T. and Gerdes, K. (2000) Coupled nucleotide covariations reveal dynamic RNA interaction patterns. RNA, 6, 1483-1491.
-
(2000)
RNA
, vol.6
, pp. 1483-1491
-
-
Gultyaev, A.P.1
Franch, T.2
Gerdes, K.3
-
50
-
-
0344628782
-
Structure of HCV IRES domain II determined by NMR
-
Lukavsky, P.J., Kim, I., Otto, G.A. and Puglisi, J.D. (2003) Structure of HCV IRES domain II determined by NMR. Nat. Struct. Biol., 10, 1033-1038.
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 1033-1038
-
-
Lukavsky, P.J.1
Kim, I.2
Otto, G.A.3
Puglisi, J.D.4
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