De novo prediction of structured RNAs from genomic sequences

Trends in Biotechnology

Volumn 28, Issue 1, 2010, Pages 9-19

  Gorodkin, Jan ^a   Hofacker, Ivo L ^b   Torarinsson, Elfar ^a   Yao, Zizhen ^c   Havgaard, Jakob H ^a   Ruzzo, Walter L ^c,d  

^a IBHV   (Denmark)

^b UNIVERSITY OF VIENNA   (Austria)

^c Fred Hutchinson Cancer Research Center   (United States)

^d UNIVERSITY OF WASHINGTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALIGNMENT ALGORITHMS; CELLULAR COMPONENTS; COMPARATIVE GENOMICS; CROSS-SPECIES; EVOLUTIONARY CONSERVATIONS; GENOMIC SEQUENCE; HIGH-THROUGHPUT; NON-CODING RNAS; PRIMARY SEQUENCES; SCALE PREDICTION; SECONDARY STRUCTURES; SEQUENCE IDENTITY;

NUCLEIC ACIDS; RNA;

GENES;

AMINO ACID; MICRORNA; NUCLEAR RNA; RNA;

AMINO ACID SUBSTITUTION; COMPUTER MODEL; COMPUTER PROGRAM; GENE CLUSTER; GENE EXPRESSION; GENE FUNCTION; GENE SEQUENCE; GENETIC ALGORITHM; GENETIC CONSERVATION; GENETIC DATABASE; GENETIC SCREENING; HUMAN; HUMAN GENOME; INTERACTIONS WITH RNA; NONHUMAN; ONLINE SYSTEM; PRIORITY JOURNAL; PROTEIN MOTIF; PROTEIN SECONDARY STRUCTURE; REVIEW; RNA STRUCTURE; SEQUENCE ALIGNMENT; STRUCTURAL GENOMICS; UNTRANSLATED REGION;

BASE SEQUENCE; COMPARATIVE GENOMIC HYBRIDIZATION; COMPUTATIONAL BIOLOGY; CONSERVED SEQUENCE; EVOLUTION, MOLECULAR; GENOME; NUCLEIC ACID CONFORMATION; RNA, UNTRANSLATED; SEQUENCE ANALYSIS, RNA;

EID: 71849086639     PISSN: 01677799     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tibtech.2009.09.006     Document Type: Review

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