-
1
-
-
0031905698
-
A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initiation of hepatitis C and classical swine fever virus RNAs
-
Pestova, T.V., Shatsky, I.N., Fletcher, S.P., Jackson, R.J. & Hellen, C.U. A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initiation of hepatitis C and classical swine fever virus RNAs. Genes Dev. 12, 67-83 (1998).
-
(1998)
Genes Dev.
, vol.12
, pp. 67-83
-
-
Pestova, T.V.1
Shatsky, I.N.2
Fletcher, S.P.3
Jackson, R.J.4
Hellen, C.U.5
-
2
-
-
0030731419
-
Starting at the beginning, middle, and end: Translation initiation in eukaryotes
-
Sachs, A.B., Sarnow, P. & Hentze, M.W. Starting at the beginning, middle, and end: translation initiation in eukaryotes. Cell 89, 831-838 (1997).
-
(1997)
Cell
, vol.89
, pp. 831-838
-
-
Sachs, A.B.1
Sarnow, P.2
Hentze, M.W.3
-
3
-
-
0035260658
-
Mechanism of ribosome recruitment by hepatitis C IRES RNA
-
Kieft, J.S., Zhou, K., Jubin, R. & Doudna, J.A. Mechanism of ribosome recruitment by hepatitis C IRES RNA. RNA 7, 194-206 (2001).
-
(2001)
RNA
, vol.7
, pp. 194-206
-
-
Kieft, J.S.1
Zhou, K.2
Jubin, R.3
Doudna, J.A.4
-
4
-
-
0035831269
-
Hepatitis C virus IRES RNA-induced changes in the conformation of the 40s ribosomal subunit
-
Spahn, C.M. et al. Hepatitis C virus IRES RNA-induced changes in the conformation of the 40s ribosomal subunit. Science 291, 1959-1962 (2001).
-
(2001)
Science
, vol.291
, pp. 1959-1962
-
-
Spahn, C.M.1
-
5
-
-
0036077344
-
Ribosomal proteins mediate the hepatitis C virus IRES-HeLa 40S interaction
-
Otto, G.A., Lukavsky, P.J., Lancaster, A.M., Sarnow, P. & Puglisi, J.D. Ribosomal proteins mediate the hepatitis C virus IRES-HeLa 40S interaction. RNA 8, 913-923 (2002).
-
(2002)
RNA
, vol.8
, pp. 913-923
-
-
Otto, G.A.1
Lukavsky, P.J.2
Lancaster, A.M.3
Sarnow, P.4
Puglisi, J.D.5
-
6
-
-
0037077562
-
NMR study of 100kDa HCV IRES RNA using segmental isotope labeling
-
Kim, I., Lukavsky, P.J. & Puglisi, J.D. NMR study of 100kDa HCV IRES RNA using segmental isotope labeling. J. Am. Chem. Soc. 124, 9338-9339 (2002).
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 9338-9339
-
-
Kim, I.1
Lukavsky, P.J.2
Puglisi, J.D.3
-
7
-
-
0030722243
-
Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium
-
Tjandra, N. & Bax, A. Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium. Science 278, 1111-1114 (1997).
-
(1997)
Science
, vol.278
, pp. 1111-1114
-
-
Tjandra, N.1
Bax, A.2
-
8
-
-
0032012610
-
Direct structure refinement against residual dipolar couplings in the presence of rhombicity of unknown magnitude
-
Clore, G.M., Gronenborn, A.M. & Tjandra, N. Direct structure refinement against residual dipolar couplings in the presence of rhombicity of unknown magnitude. J. Magn. Reson. 131, 159-162 (1998).
-
(1998)
J. Magn. Reson.
, vol.131
, pp. 159-162
-
-
Clore, G.M.1
Gronenborn, A.M.2
Tjandra, N.3
-
9
-
-
0037470595
-
Refined solution structure of the iron-responsive element RNA using residual dipolar couplings
-
McCallum, S.A. & Pardi, A. Refined solution structure of the iron-responsive element RNA using residual dipolar couplings. J. Mol. Biol. 326, 1037-1050 (2003).
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 1037-1050
-
-
McCallum, S.A.1
Pardi, A.2
-
10
-
-
0032903304
-
A phylogenetically conserved stem-loop structure at the 5′ border of the internal ribosome entry site of hepatitis C virus is required for cap-independent viral translation
-
Honda, M., Beard, M.R., Ping, L.H. & Lemon, S.M. A phylogenetically conserved stem-loop structure at the 5′ border of the internal ribosome entry site of hepatitis C virus is required for cap-independent viral translation. J. Virol. 73, 1165-1174 (1999).
-
(1999)
J. Virol.
, vol.73
, pp. 1165-1174
-
-
Honda, M.1
Beard, M.R.2
Ping, L.H.3
Lemon, S.M.4
-
11
-
-
0035081519
-
Genetic analysis of a poliovirus/hepatitis C virus chimera: New structure for domain II of the internal ribosomal entry site of hepatitis C virus
-
Zhao, W.D. & Wimmer, E. Genetic analysis of a poliovirus/hepatitis C virus chimera: new structure for domain II of the internal ribosomal entry site of hepatitis C virus. J. Virol. 75, 3719-3730 (2001).
-
(2001)
J. Virol.
, vol.75
, pp. 3719-3730
-
-
Zhao, W.D.1
Wimmer, E.2
-
12
-
-
0034921520
-
Identification and characterization of metal ion binding sites in RNA
-
Gonzalez, R.L., Jr. & Tinoco, I. Jr. Identification and characterization of metal ion binding sites in RNA. Methods Enzymol. 338, 421-443 (2001).
-
(2001)
Methods Enzymol.
, vol.338
, pp. 421-443
-
-
Gonzalez Jr., R.L.1
Tinoco Jr., I.2
-
13
-
-
0033673387
-
Structures of two essential RNA domains for hepatitis C virus internal ribosome entry site function
-
Lukavsky, P.J., Otto, G.A., Lancaster, A.M., Sarnow, P. & Puglisi, J.D. Structures of two essential RNA domains for hepatitis C virus internal ribosome entry site function. Nat. Struct. Biol. 7, 1105-1110 (2000).
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 1105-1110
-
-
Lukavsky, P.J.1
Otto, G.A.2
Lancaster, A.M.3
Sarnow, P.4
Puglisi, J.D.5
-
14
-
-
0032505999
-
Crystal structure of the ribosomal RNA domain essential for binding elongation factors
-
Correll, C.C. et al. Crystal structure of the ribosomal RNA domain essential for binding elongation factors. Proc. Natl. Acad. Sci. USA 95, 13436-13441 (1998).
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 13436-13441
-
-
Correll, C.C.1
-
15
-
-
0029027606
-
Variation of the hepatitis C virus 5′ non-coding region: Implications for secondary structure, virus detection and typing
-
The International HCV Collaborative Study Group
-
Smith, D.B. et al. Variation of the hepatitis C virus 5′ non-coding region: implications for secondary structure, virus detection and typing. The International HCV Collaborative Study Group. J. Gen. Virol. 76, 1749-1761 (1995).
-
(1995)
J. Gen. Virol.
, vol.76
, pp. 1749-1761
-
-
Smith, D.B.1
-
16
-
-
0028820398
-
Biochemical and NMR studies of RNA conformation with an emphasis on RNA pseudoknots
-
Puglisi, J.D. & Wyatt, J.R. Biochemical and NMR studies of RNA conformation with an emphasis on RNA pseudoknots. Methods Enzymol. 261, 323-350 (1995).
-
(1995)
Methods Enzymol.
, vol.261
, pp. 323-350
-
-
Puglisi, J.D.1
Wyatt, J.R.2
-
17
-
-
0035720187
-
RNAPack: An integrated NMR approach to RNA structure determination
-
Lukavsky, P.J. & Puglisi, J.D. RNAPack: an integrated NMR approach to RNA structure determination. Methods 25, 316-332 (2001).
-
(2001)
Methods
, vol.25
, pp. 316-332
-
-
Lukavsky, P.J.1
Puglisi, J.D.2
-
18
-
-
0026744912
-
Preparation of isotopically labeled ribonucleotides for multidimensional NMR spectroscopy of RNA
-
Batey, R.T., Inada, M., Kujawinski, E., Puglisi, J.D. & Williamson, J.R. Preparation of isotopically labeled ribonucleotides for multidimensional NMR spectroscopy of RNA. Nucleic Acids Res. 20, 4515-4523 (1992).
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 4515-4523
-
-
Batey, R.T.1
Inada, M.2
Kujawinski, E.3
Puglisi, J.D.4
Williamson, J.R.5
-
19
-
-
0031760503
-
Tunable alignment of macromolecules by filamentous phage yields dipolar coupling interactions
-
Hansen, M.R., Mueller, L. & Pardi, A. Tunable alignment of macromolecules by filamentous phage yields dipolar coupling interactions. Nat. Struct. Biol. 5, 1065-1074 (1998).
-
(1998)
Nat. Struct. Biol.
, vol.5
, pp. 1065-1074
-
-
Hansen, M.R.1
Mueller, L.2
Pardi, A.3
-
20
-
-
0004040543
-
-
University of California, San Francisco
-
Goddard, T.D. & Kneller, D.G. Sparky 3. (University of California, San Francisco, 2000).
-
(2000)
Sparky 3
-
-
Goddard, T.D.1
Kneller, D.G.2
-
22
-
-
0032556228
-
Single scan, sensitivity- and gradient-enhanced TROSY for multidimensional NMR experiments
-
Weigelt, J. Single scan, sensitivity- and gradient-enhanced TROSY for multidimensional NMR experiments. J. Am. Chem. Soc. 120, 10778-10779 (1998).
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 10778-10779
-
-
Weigelt, J.1
-
23
-
-
0030612833
-
Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution
-
Pervushin, K., Riek, R., Wider, G. & Wüthrich, K. Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution. Proc. Natl. Acad. Sci. USA 94, 12366-12371 (1997).
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 12366-12371
-
-
Pervushin, K.1
Riek, R.2
Wider, G.3
Wüthrich, K.4
-
24
-
-
0003769049
-
-
Yale Univ. Press, New Haven, Connecticut, USA
-
Brunger, A.T. X-PLOR, Version 3.1. A System for X-ray Crystallography and NMR (Yale Univ. Press, New Haven, Connecticut, USA, 1992).
-
(1992)
X-PLOR Version 3.1. A System for X-ray Crystallography and NMR
-
-
Brunger, A.T.1
-
25
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger, A.T. et al. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D 54, 905-921 (1998).
-
(1998)
Acta Crystallogr. D
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
-
26
-
-
0033145058
-
Order matrix analysis of residual dipolar couplings using singular value decomposition
-
Losonczi, J.A., Andrec, M., Fischer, M.W. & Prestegard, J.H. Order matrix analysis of residual dipolar couplings using singular value decomposition. J. Magn. Reson. 138, 334-342 (1999).
-
(1999)
J. Magn. Reson.
, vol.138
, pp. 334-342
-
-
Losonczi, J.A.1
Andrec, M.2
Fischer, M.W.3
Prestegard, J.H.4
-
27
-
-
0034685436
-
Prediction of sterically induced alignment in a dilute liquid crystalline phase: Aid to protein structure determination by NMR
-
Zweckstetter, M. & Bax, A. Prediction of sterically induced alignment in a dilute liquid crystalline phase: aid to protein structure determination by NMR. J. Am. Chem. Soc. 122, 3791-3792 (2000).
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 3791-3792
-
-
Zweckstetter, M.1
Bax, A.2
-
28
-
-
0024539180
-
Defining the structure of irregular nucleic acids: Conventions and principles
-
Lavery, R. & Sklenar, H. Defining the structure of irregular nucleic acids: conventions and principles. J. Biomol. Struct. Dyn. 6, 655-667 (1989).
-
(1989)
J. Biomol. Struct. Dyn.
, vol.6
, pp. 655-667
-
-
Lavery, R.1
Sklenar, H.2
-
29
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structures
-
Koradi, R., Billeter, M. & Wüthrich, K. MOLMOL: a program for display and analysis of macromolecular structures. J. Mol. Graph. 14, 51-55, 29-32 (1996).
-
(1996)
J. Mol. Graph.
, vol.14
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wüthrich, K.3
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