-
2
-
-
46249099836
-
Biological switches and clocks
-
2706456, 18522926
-
Tyson JJ, Albert R, Goldbeter A, Ruoff P, Sible J. Biological switches and clocks. J R Soc Interface 2008, 5(Suppl 1):S1-8. 2706456, 18522926.
-
(2008)
J R Soc Interface
, vol.5
, Issue.SUPPL. 1
-
-
Tyson, J.J.1
Albert, R.2
Goldbeter, A.3
Ruoff, P.4
Sible, J.5
-
3
-
-
0037605637
-
Bistability in cell signaling: How to make continuous processes discontinuous, and reversible processes irreversible
-
10.1063/1.1349894, 12779456
-
Ferrell JE, Xiong W. Bistability in cell signaling: How to make continuous processes discontinuous, and reversible processes irreversible. Chaos 2001, 11:227-236. 10.1063/1.1349894, 12779456.
-
(2001)
Chaos
, vol.11
, pp. 227-236
-
-
Ferrell, J.E.1
Xiong, W.2
-
4
-
-
0242416539
-
Noise in eukaryotic gene expression
-
10.1038/nature01546, 12687005
-
Blake WJ, KAErn M, Cantor CR, Collins JJ. Noise in eukaryotic gene expression. Nature 2003, 422:633-637. 10.1038/nature01546, 12687005.
-
(2003)
Nature
, vol.422
, pp. 633-637
-
-
Blake, W.J.1
KAErn, M.2
Cantor, C.R.3
Collins, J.J.4
-
5
-
-
16644373292
-
Noise Minimization in Eukaryotic Gene Expression
-
10.1371/journal.pbio.0020137, 400249, 15124029
-
Fraser HB, Hirsh AE, Giaever G, Kumm J, Eisen MB. Noise Minimization in Eukaryotic Gene Expression. PLoS Biol 2004, 2:e137. 10.1371/journal.pbio.0020137, 400249, 15124029.
-
(2004)
PLoS Biol
, vol.2
-
-
Fraser, H.B.1
Hirsh, A.E.2
Giaever, G.3
Kumm, J.4
Eisen, M.B.5
-
6
-
-
49549102185
-
Uncovering mechanisms of bistability in biological systems
-
10.1016/j.copbio.2008.06.009, 18634875
-
Pomerening JR. Uncovering mechanisms of bistability in biological systems. Curr Opin Biotechnol 2008, 19:381-388. 10.1016/j.copbio.2008.06.009, 18634875.
-
(2008)
Curr Opin Biotechnol
, vol.19
, pp. 381-388
-
-
Pomerening, J.R.1
-
8
-
-
33645073688
-
Phenotypic variation in bacteria: the role of feedback regulation
-
Smits WK, Kuipers OP, Veening J-W. Phenotypic variation in bacteria: the role of feedback regulation. Nat Rev Micro 2006, 4:259-271.
-
(2006)
Nat Rev Micro
, vol.4
, pp. 259-271
-
-
Smits, W.K.1
Kuipers, O.P.2
Veening, J.-.W.3
-
9
-
-
33645097646
-
Multistable and multistep dynamics in neutrophil differentiation
-
10.1186/1471-2121-7-11, 1409771, 16507101
-
Chang H, Oh P, Ingber D, Huang S. Multistable and multistep dynamics in neutrophil differentiation. BMC Cell Biology 2006, 7:11. 10.1186/1471-2121-7-11, 1409771, 16507101.
-
(2006)
BMC Cell Biology
, vol.7
, pp. 11
-
-
Chang, H.1
Oh, P.2
Ingber, D.3
Huang, S.4
-
10
-
-
58249092059
-
Digital Signaling and Hysteresis Characterize Ras Activation in Lymphoid Cells
-
10.1016/j.cell.2008.11.051, 2662698, 19167334
-
Das J, Ho M, Zikherman J, Govern C, Yang M, Weiss A, Chakraborty AK, Roose JP. Digital Signaling and Hysteresis Characterize Ras Activation in Lymphoid Cells. Cell 2009, 136:337-351. 10.1016/j.cell.2008.11.051, 2662698, 19167334.
-
(2009)
Cell
, vol.136
, pp. 337-351
-
-
Das, J.1
Ho, M.2
Zikherman, J.3
Govern, C.4
Yang, M.5
Weiss, A.6
Chakraborty, A.K.7
Roose, J.P.8
-
11
-
-
0345549531
-
Modeling genetic switches with positive feedback loops
-
10.1006/jtbi.2003.3190, 12642114
-
Kobayashi T, Chen L, Aihara K. Modeling genetic switches with positive feedback loops. J Theor Biol 2003, 221:379-399. 10.1006/jtbi.2003.3190, 12642114.
-
(2003)
J Theor Biol
, vol.221
, pp. 379-399
-
-
Kobayashi, T.1
Chen, L.2
Aihara, K.3
-
12
-
-
17444408518
-
Chemical models of genetic toggle switches
-
10.1021/jp045523y, 16851767
-
Warren PB, ten Wolde PR. Chemical models of genetic toggle switches. J Phys Chem B 2005, 109:6812-6823. 10.1021/jp045523y, 16851767.
-
(2005)
J Phys Chem B
, vol.109
, pp. 6812-6823
-
-
Warren, P.B.1
ten Wolde, P.R.2
-
13
-
-
33646876640
-
An integrated model of glucose and galactose metabolism regulated by the GAL genetic switch
-
10.1016/j.compbiolchem.2006.02.004, 16679066
-
Demir O, Aksan Kurnaz I. An integrated model of glucose and galactose metabolism regulated by the GAL genetic switch. Comput Biol Chem 2006, 30:179-192. 10.1016/j.compbiolchem.2006.02.004, 16679066.
-
(2006)
Comput Biol Chem
, vol.30
, pp. 179-192
-
-
Demir, O.1
Aksan Kurnaz, I.2
-
14
-
-
49049122027
-
Predicting the asymmetric response of a genetic switch to noise
-
10.1016/j.jtbi.2008.04.032, 18554612
-
Ochab-Marcinek A. Predicting the asymmetric response of a genetic switch to noise. J Theor Biol 2008, 254:37-44. 10.1016/j.jtbi.2008.04.032, 18554612.
-
(2008)
J Theor Biol
, vol.254
, pp. 37-44
-
-
Ochab-Marcinek, A.1
-
15
-
-
43149108161
-
A bistable Rb-E2F switch underlies the restriction point
-
10.1038/ncb1711, 18364697
-
Yao G, Lee TJ, Mori S, Nevins JR, You L. A bistable Rb-E2F switch underlies the restriction point. Nat Cell Biol 2008, 10:476-482. 10.1038/ncb1711, 18364697.
-
(2008)
Nat Cell Biol
, vol.10
, pp. 476-482
-
-
Yao, G.1
Lee, T.J.2
Mori, S.3
Nevins, J.R.4
You, L.5
-
16
-
-
0034688174
-
Construction of a genetic toggle switch in Escherichia coli
-
10.1038/35002131, 10659857
-
Gardner TS, Cantor CR, Collins JJ. Construction of a genetic toggle switch in Escherichia coli. Nature 2000, 403:339-342. 10.1038/35002131, 10659857.
-
(2000)
Nature
, vol.403
, pp. 339-342
-
-
Gardner, T.S.1
Cantor, C.R.2
Collins, J.J.3
-
17
-
-
46249129370
-
Rate constants rather than biochemical mechanism determine behaviour of genetic clocks
-
2706451, 18426770
-
Conrad E, Mayo AE, Ninfa AJ, Forger DB. Rate constants rather than biochemical mechanism determine behaviour of genetic clocks. J R Soc Interface 2008, 5(Suppl 1):S9-15. 2706451, 18426770.
-
(2008)
J R Soc Interface
, vol.5
, Issue.SUPPL. 1
-
-
Conrad, E.1
Mayo, A.E.2
Ninfa, A.J.3
Forger, D.B.4
-
18
-
-
34547916832
-
Environmental signal integration by a modular AND gate
-
1964800, 17700541
-
Anderson JC, Voigt CA, Arkin AP. Environmental signal integration by a modular AND gate. Mol Syst Biol 2007, 3:133. 1964800, 17700541.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 133
-
-
Anderson, J.C.1
Voigt, C.A.2
Arkin, A.P.3
-
19
-
-
0032496358
-
The biochemical basis of an all-or-none cell fate switch in Xenopus oocytes
-
10.1126/science.280.5365.895, 9572732
-
Ferrell JE, Machleder EM. The biochemical basis of an all-or-none cell fate switch in Xenopus oocytes. Science 1998, 280:895-898. 10.1126/science.280.5365.895, 9572732.
-
(1998)
Science
, vol.280
, pp. 895-898
-
-
Ferrell, J.E.1
Machleder, E.M.2
-
20
-
-
78049263544
-
Large-Scale Analysis of Network Bistability for Human Cancers
-
10.1371/journal.pcbi.1000851, 2900289, 20628618
-
Shiraishi T, Matsuyama S, Kitano H. Large-Scale Analysis of Network Bistability for Human Cancers. PLoS Comput Biol 2010, 6:e1000851. 10.1371/journal.pcbi.1000851, 2900289, 20628618.
-
(2010)
PLoS Comput Biol
, vol.6
-
-
Shiraishi, T.1
Matsuyama, S.2
Kitano, H.3
-
21
-
-
0842288229
-
Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades
-
10.1083/jcb.200308060, 2172246, 14744999
-
Markevich NI, Hoek JB, Kholodenko BN. Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades. The Journal of Cell Biology 2004, 164:353-359. 10.1083/jcb.200308060, 2172246, 14744999.
-
(2004)
The Journal of Cell Biology
, vol.164
, pp. 353-359
-
-
Markevich, N.I.1
Hoek, J.B.2
Kholodenko, B.N.3
-
22
-
-
1442354192
-
Multistability in the lactose utilization network of Escherichia coli
-
10.1038/nature02298, 14973486
-
Ozbudak EM, Thattai M, Lim HN, Shraiman BI, Van Oudenaarden A. Multistability in the lactose utilization network of Escherichia coli. Nature 2004, 427:737-740. 10.1038/nature02298, 14973486.
-
(2004)
Nature
, vol.427
, pp. 737-740
-
-
Ozbudak, E.M.1
Thattai, M.2
Lim, H.N.3
Shraiman, B.I.4
Van Oudenaarden, A.5
-
23
-
-
18144408736
-
Cell fates as high-dimensional attractor states of a complex gene regulatory network
-
Huang S, Eichler G, Bar-Yam Y, Ingber DE. Cell fates as high-dimensional attractor states of a complex gene regulatory network. Phys Rev Lett 2005, 94:128701.
-
(2005)
Phys Rev Lett
, vol.94
, pp. 128701
-
-
Huang, S.1
Eichler, G.2
Bar-Yam, Y.3
Ingber, D.E.4
-
24
-
-
22144452865
-
Hysteresis in a synthetic mammalian gene network
-
10.1073/pnas.0500345102, 1172236, 15972812
-
Kramer BP, Fussenegger M. Hysteresis in a synthetic mammalian gene network. Proceedings of the National Academy of Sciences of the United States of America 2005, 102:9517-9522. 10.1073/pnas.0500345102, 1172236, 15972812.
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, pp. 9517-9522
-
-
Kramer, B.P.1
Fussenegger, M.2
-
25
-
-
82555200340
-
Modeling the Metallicity Distribution of Globular Clusters
-
Muratov AL, Gnedin OY. Modeling the Metallicity Distribution of Globular Clusters. 1002.1325 2010,
-
(2010)
1002.1325
-
-
Muratov, A.L.1
Gnedin, O.Y.2
-
26
-
-
0035063183
-
The Rb/E2F pathway and cancer
-
10.1093/hmg/10.7.699, 11257102
-
Nevins JR. The Rb/E2F pathway and cancer. Human Molecular Genetics 2001, 10:699-703. 10.1093/hmg/10.7.699, 11257102.
-
(2001)
Human Molecular Genetics
, vol.10
, pp. 699-703
-
-
Nevins, J.R.1
-
27
-
-
27744450664
-
A comparative analysis of the GAL genetic switch between not-so-distant cousins: Saccharomyces cerevisiae versus Kluyveromyces lactis
-
10.1016/j.femsyr.2005.05.003, 16014343
-
Rubio-Texeira M. A comparative analysis of the GAL genetic switch between not-so-distant cousins: Saccharomyces cerevisiae versus Kluyveromyces lactis. FEMS Yeast Res 2005, 5:1115-1128. 10.1016/j.femsyr.2005.05.003, 16014343.
-
(2005)
FEMS Yeast Res
, vol.5
, pp. 1115-1128
-
-
Rubio-Texeira, M.1
-
28
-
-
58149204055
-
ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression
-
10.1093/nar/gkn889, 2686529, 19015125
-
Parkinson H, Kapushesky M, Kolesnikov N, Rustici G, Shojatalab M, Abeygunawardena N, Berube H, Dylag M, Emam I, Farne A, Holloway E, Lukk M, Malone J, Mani R, Pilicheva E, Rayner TF, Rezwan F, Sharma A, Williams E, Bradley XZ, Adamusiak T, Brandizi M, Burdett T, Coulson R, Krestyaninova M, Kurnosov P, Maguire E, Neogi SG, Rocca-Serra P, Sansone S-A, Sklyar N, Zhao M, Sarkans U, Brazma A. ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression. Nucleic Acids Res 2009, 37:D868-872. 10.1093/nar/gkn889, 2686529, 19015125.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Parkinson, H.1
Kapushesky, M.2
Kolesnikov, N.3
Rustici, G.4
Shojatalab, M.5
Abeygunawardena, N.6
Berube, H.7
Dylag, M.8
Emam, I.9
Farne, A.10
Holloway, E.11
Lukk, M.12
Malone, J.13
Mani, R.14
Pilicheva, E.15
Rayner, T.F.16
Rezwan, F.17
Sharma, A.18
Williams, E.19
Bradley, X.Z.20
Adamusiak, T.21
Brandizi, M.22
Burdett, T.23
Coulson, R.24
Krestyaninova, M.25
Kurnosov, P.26
Maguire, E.27
Neogi, S.G.28
Rocca-Serra, P.29
Sansone, S.-.A.30
Sklyar, N.31
Zhao, M.32
Sarkans, U.33
Brazma, A.34
more..
-
29
-
-
33751227501
-
DTL/CDT2 is essential for both CDT1 regulation and the early G2/M checkpoint
-
10.1101/gad.1482106, 3206536, 22053279
-
Sansam CL, Shepard JL, Lai K, Ianari A, Danielian PS, Amsterdam A, Hopkins N, Lees JA. DTL/CDT2 is essential for both CDT1 regulation and the early G2/M checkpoint. Genes & Development 2006, 20:3117-3129. 10.1101/gad.1482106, 3206536, 22053279.
-
(2006)
Genes & Development
, vol.20
, pp. 3117-3129
-
-
Sansam, C.L.1
Shepard, J.L.2
Lai, K.3
Ianari, A.4
Danielian, P.S.5
Amsterdam, A.6
Hopkins, N.7
Lees, J.A.8
-
30
-
-
33751232623
-
Role of L2DTL, cell cycle-regulated nuclear and centrosome protein, in aggressive hepatocellular carcinoma
-
10.4161/cc.5.22.3500, 17106265
-
Pan H-W, Chou H-YE, Liu S-H, Peng S-Y, Liu C-L, Hsu H-C. Role of L2DTL, cell cycle-regulated nuclear and centrosome protein, in aggressive hepatocellular carcinoma. Cell Cycle 2006, 5:2676-2687. 10.4161/cc.5.22.3500, 17106265.
-
(2006)
Cell Cycle
, vol.5
, pp. 2676-2687
-
-
Pan, H.-.W.1
Chou, H.-.Y.E.2
Liu, S.-.H.3
Peng, S.-.Y.4
Liu, C.-.L.5
Hsu, H.-.C.6
-
31
-
-
52949125226
-
Involvement of elevated expression of multiple cell-cycle regulator, DTL/RAMP (denticleless/RA-regulated nuclear matrix associated protein), in the growth of breast cancer cells
-
10.1038/onc.2008.186, 18542055
-
Ueki T, Nishidate T, Park JH, Lin ML, Shimo A, Hirata K, Nakamura Y, Katagiri T. Involvement of elevated expression of multiple cell-cycle regulator, DTL/RAMP (denticleless/RA-regulated nuclear matrix associated protein), in the growth of breast cancer cells. Oncogene 2008, 27:5672-5683. 10.1038/onc.2008.186, 18542055.
-
(2008)
Oncogene
, vol.27
, pp. 5672-5683
-
-
Ueki, T.1
Nishidate, T.2
Park, J.H.3
Lin, M.L.4
Shimo, A.5
Hirata, K.6
Nakamura, Y.7
Katagiri, T.8
-
32
-
-
73649135801
-
Gene networks and microRNAs implicated in aggressive prostate cancer
-
10.1158/0008-5472.CAN-09-2183, 2795036, 19996289
-
Wang L, Tang H, Thayanithy V, Subramanian S, Oberg AL, Cunningham JM, Cerhan JR, Steer CJ, Thibodeau SN. Gene networks and microRNAs implicated in aggressive prostate cancer. Cancer Res 2009, 69:9490-9497. 10.1158/0008-5472.CAN-09-2183, 2795036, 19996289.
-
(2009)
Cancer Res
, vol.69
, pp. 9490-9497
-
-
Wang, L.1
Tang, H.2
Thayanithy, V.3
Subramanian, S.4
Oberg, A.L.5
Cunningham, J.M.6
Cerhan, J.R.7
Steer, C.J.8
Thibodeau, S.N.9
-
33
-
-
0034633702
-
Generation of oscillations by the p53-Mdm2 feedback loop: a theoretical and experimental study
-
17186, 11016968
-
Lev Bar-Or R, Maya R, Segel LA, Alon U, Levine AJ, Oren M. Generation of oscillations by the p53-Mdm2 feedback loop: a theoretical and experimental study. Proc Natl Acad Sci USA 2000, 97:11250-11255. 17186, 11016968.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 11250-11255
-
-
Lev Bar-Or, R.1
Maya, R.2
Segel, L.A.3
Alon, U.4
Levine, A.J.5
Oren, M.6
-
34
-
-
33745038921
-
Ranked prediction of p53 targets using hidden variable dynamic modeling
-
10.1186/gb-2006-7-3-r25, 1557743, 16584535
-
Barenco M, Tomescu D, Brewer D, Callard R, Stark J, Hubank M. Ranked prediction of p53 targets using hidden variable dynamic modeling. Genome Biol 2006, 7:R25. 10.1186/gb-2006-7-3-r25, 1557743, 16584535.
-
(2006)
Genome Biol
, vol.7
-
-
Barenco, M.1
Tomescu, D.2
Brewer, D.3
Callard, R.4
Stark, J.5
Hubank, M.6
-
35
-
-
33745451921
-
Oscillations and variability in the p53 system
-
2006.0033
-
Geva-Zatorsky N, Rosenfeld N, Itzkovitz S, Milo R, Sigal A, Dekel E, Yarnitzky T, Liron Y, Polak P, Lahav G, Alon U. Oscillations and variability in the p53 system. Mol Syst Biol 2006, 2. 2006.0033.
-
(2006)
Mol Syst Biol
, vol.2
-
-
Geva-Zatorsky, N.1
Rosenfeld, N.2
Itzkovitz, S.3
Milo, R.4
Sigal, A.5
Dekel, E.6
Yarnitzky, T.7
Liron, Y.8
Polak, P.9
Lahav, G.10
Alon, U.11
-
36
-
-
42949171936
-
Recurrent initiation: a mechanism for triggering p53 pulses in response to DNA damage
-
10.1016/j.molcel.2008.03.016, 2579769, 18471974
-
Batchelor E, Mock CS, Bhan I, Loewer A, Lahav G. Recurrent initiation: a mechanism for triggering p53 pulses in response to DNA damage. Mol Cell 2008, 30:277-289. 10.1016/j.molcel.2008.03.016, 2579769, 18471974.
-
(2008)
Mol Cell
, vol.30
, pp. 277-289
-
-
Batchelor, E.1
Mock, C.S.2
Bhan, I.3
Loewer, A.4
Lahav, G.5
-
37
-
-
67349091738
-
The ups and downs of p53: understanding protein dynamics in single cells
-
10.1038/nrc2604, 2892289, 19360021
-
Batchelor E, Loewer A, Lahav G. The ups and downs of p53: understanding protein dynamics in single cells. Nat Rev Cancer 2009, 9:371-377. 10.1038/nrc2604, 2892289, 19360021.
-
(2009)
Nat Rev Cancer
, vol.9
, pp. 371-377
-
-
Batchelor, E.1
Loewer, A.2
Lahav, G.3
-
38
-
-
77950867279
-
Gene expression patterns distinguish breast carcinomas from normal breast tissues: the Malaysian context
-
10.1016/j.prp.2009.11.006, 20097481
-
Pau Ni IB, Zakaria Z, Muhammad R, Abdullah N, Ibrahim N, Aina Emran N, Hisham Abdullah N, Syed Hussain SNA. Gene expression patterns distinguish breast carcinomas from normal breast tissues: the Malaysian context. Pathol Res Pract 2010, 206:223-228. 10.1016/j.prp.2009.11.006, 20097481.
-
(2010)
Pathol Res Pract
, vol.206
, pp. 223-228
-
-
Pau Ni, I.B.1
Zakaria, Z.2
Muhammad, R.3
Abdullah, N.4
Ibrahim, N.5
Aina Emran, N.6
Hisham Abdullah, N.7
Syed Hussain, S.N.A.8
-
40
-
-
11244272987
-
Bimodal frequency distribution of estrogen receptor immunohistochemical staining results in breast cancer: an analysis of 825 cases
-
10.1309/HCF035N9WK40ETJ0, 15762275
-
Collins LC, Botero ML, Schnitt SJ. Bimodal frequency distribution of estrogen receptor immunohistochemical staining results in breast cancer: an analysis of 825 cases. Am J Clin Pathol 2005, 123:16-20. 10.1309/HCF035N9WK40ETJ0, 15762275.
-
(2005)
Am J Clin Pathol
, vol.123
, pp. 16-20
-
-
Collins, L.C.1
Botero, M.L.2
Schnitt, S.J.3
-
41
-
-
0030722152
-
Auto-regulation of the estrogen receptor promoter
-
10.1016/S0960-0760(97)00023-X, 9393950
-
Castles CG, Oesterreich S, Hansen R, Fuqua SAW. Auto-regulation of the estrogen receptor promoter. The Journal of Steroid Biochemistry and Molecular Biology 1997, 62:155-163. 10.1016/S0960-0760(97)00023-X, 9393950.
-
(1997)
The Journal of Steroid Biochemistry and Molecular Biology
, vol.62
, pp. 155-163
-
-
Castles, C.G.1
Oesterreich, S.2
Hansen, R.3
Fuqua, S.A.W.4
-
42
-
-
78549249846
-
Epigenetically deregulated microRNA-375 is involved in a positive feedback loop with estrogen receptor alpha in breast cancer cells
-
10.1158/0008-5472.CAN-10-1318, 20978187
-
de Souza Rocha Simonini P, Breiling A, Gupta N, Malekpour M, Youns M, Omranipour R, Malekpour F, Volinia S, Croce CM, Najmabadi H, Diederichs S, Sahin O, Mayer D, Lyko F, Hoheisel JD, Riazalhosseini Y. Epigenetically deregulated microRNA-375 is involved in a positive feedback loop with estrogen receptor alpha in breast cancer cells. Cancer Res 2010, 70:9175-9184. 10.1158/0008-5472.CAN-10-1318, 20978187.
-
(2010)
Cancer Res
, vol.70
, pp. 9175-9184
-
-
de Souza Rocha Simonini, P.1
Breiling, A.2
Gupta, N.3
Malekpour, M.4
Youns, M.5
Omranipour, R.6
Malekpour, F.7
Volinia, S.8
Croce, C.M.9
Najmabadi, H.10
Diederichs, S.11
Sahin, O.12
Mayer, D.13
Lyko, F.14
Hoheisel, J.D.15
Riazalhosseini, Y.16
-
43
-
-
0034638925
-
Molecular mechanisms underlying ErbB2/HER2 action in breast cancer
-
10.1038/sj.onc.1203973, 11156523
-
Harari D, Yarden Y. Molecular mechanisms underlying ErbB2/HER2 action in breast cancer. Oncogene 2000, 19:6102-6114. 10.1038/sj.onc.1203973, 11156523.
-
(2000)
Oncogene
, vol.19
, pp. 6102-6114
-
-
Harari, D.1
Yarden, Y.2
-
44
-
-
82555179709
-
A feedback loop between BEX2 and ErbB2 mediated by c-Jun signaling in breast cancer
-
n/a-n/a
-
Naderi A, Liu J, Francis GD. A feedback loop between BEX2 and ErbB2 mediated by c-Jun signaling in breast cancer. Int J Cancer 2011, n/a-n/a.
-
(2011)
Int J Cancer
-
-
Naderi, A.1
Liu, J.2
Francis, G.D.3
-
45
-
-
69249137029
-
Biological determinants of endocrine resistance in breast cancer
-
10.1038/nrc2713, 19701242
-
Musgrove EA, Sutherland RL. Biological determinants of endocrine resistance in breast cancer. Nat Rev Cancer 2009, 9:631-643. 10.1038/nrc2713, 19701242.
-
(2009)
Nat Rev Cancer
, vol.9
, pp. 631-643
-
-
Musgrove, E.A.1
Sutherland, R.L.2
-
46
-
-
34548237309
-
Pathways to tamoxifen resistance
-
10.1016/j.canlet.2007.03.016, 2533271, 17475399
-
Riggins RB, Schrecengost RS, Guerrero MS, Bouton AH. Pathways to tamoxifen resistance. Cancer Lett 2007, 256:1-24. 10.1016/j.canlet.2007.03.016, 2533271, 17475399.
-
(2007)
Cancer Lett
, vol.256
, pp. 1-24
-
-
Riggins, R.B.1
Schrecengost, R.S.2
Guerrero, M.S.3
Bouton, A.H.4
-
47
-
-
79951581505
-
CAMP initiates early phase neuron-like morphology changes and late phase neural differentiation in mesenchymal stem cells
-
10.1007/s00018-010-0497-1, 20725762
-
Zhang L, Seitz LC, Abramczyk AM, Liu L, Chan C. cAMP initiates early phase neuron-like morphology changes and late phase neural differentiation in mesenchymal stem cells. Cell Mol Life Sci 2011, 68:863-876. 10.1007/s00018-010-0497-1, 20725762.
-
(2011)
Cell Mol Life Sci
, vol.68
, pp. 863-876
-
-
Zhang, L.1
Seitz, L.C.2
Abramczyk, A.M.3
Liu, L.4
Chan, C.5
-
48
-
-
0031800858
-
Human Trop-2 is a tumor-associated calcium signal transducer
-
10.1002/(SICI)1097-0215(19980529)76:5<671::AID-IJC10>3.0.CO;2-7, 9610724
-
Ripani E, Sacchetti A, Corda D, Alberti S. Human Trop-2 is a tumor-associated calcium signal transducer. Int J Cancer 1998, 76:671-676. 10.1002/(SICI)1097-0215(19980529)76:5<671::AID-IJC10>3.0.CO;2-7, 9610724.
-
(1998)
Int J Cancer
, vol.76
, pp. 671-676
-
-
Ripani, E.1
Sacchetti, A.2
Corda, D.3
Alberti, S.4
-
50
-
-
59149083888
-
Ca(2+)/calmodulin-dependent protein kinase II promotes cell cycle progression by directly activating MEK1 and subsequently modulating p27 phosphorylation
-
Li N, Wang C, Wu Y, Liu X, Cao X. Ca(2+)/calmodulin-dependent protein kinase II promotes cell cycle progression by directly activating MEK1 and subsequently modulating p27 phosphorylation. J Biol Chem 2009, 284:3021-3027.
-
(2009)
J Biol Chem
, vol.284
, pp. 3021-3027
-
-
Li, N.1
Wang, C.2
Wu, Y.3
Liu, X.4
Cao, X.5
-
51
-
-
77956671612
-
Trop2 expression contributes to tumor pathogenesis by activating the ERK MAPK pathway
-
10.1186/1476-4598-9-253, 2946292, 20858281
-
Cubas R, Zhang S, Li M, Chen C, Yao Q. Trop2 expression contributes to tumor pathogenesis by activating the ERK MAPK pathway. Mol Cancer 2010, 9:253. 10.1186/1476-4598-9-253, 2946292, 20858281.
-
(2010)
Mol Cancer
, vol.9
, pp. 253
-
-
Cubas, R.1
Zhang, S.2
Li, M.3
Chen, C.4
Yao, Q.5
-
53
-
-
0037399992
-
Dynamics in high-dimensional model gene networks
-
Kappler K, Edwards R, Glass L. Dynamics in high-dimensional model gene networks. Signal Processing 2003, 83:789-798.
-
(2003)
Signal Processing
, vol.83
, pp. 789-798
-
-
Kappler, K.1
Edwards, R.2
Glass, L.3
-
54
-
-
22444436489
-
An analytical study of the number of steady states in gene regulatory networks
-
10.1016/j.jtbi.2005.03.015, 15885706
-
Mochizuki A. An analytical study of the number of steady states in gene regulatory networks. J Theor Biol 2005, 236:291-310. 10.1016/j.jtbi.2005.03.015, 15885706.
-
(2005)
J Theor Biol
, vol.236
, pp. 291-310
-
-
Mochizuki, A.1
-
55
-
-
77954607438
-
Simultaneous clustering of multiple gene expression and physical interaction datasets
-
10.1371/journal.pcbi.1000742, 2855327, 20419151
-
Narayanan M, Vetta A, Schadt EE, Zhu J. Simultaneous clustering of multiple gene expression and physical interaction datasets. PLoS Comput Biol 2010, 6:e1000742. 10.1371/journal.pcbi.1000742, 2855327, 20419151.
-
(2010)
PLoS Comput Biol
, vol.6
-
-
Narayanan, M.1
Vetta, A.2
Schadt, E.E.3
Zhu, J.4
-
56
-
-
0141450348
-
Comparison and meta-analysis of microarray data: from the bench to the computer desk
-
10.1016/j.tig.2003.08.006, 14550631
-
Moreau Y, Aerts S, De Moor B, De Strooper B, Dabrowski M. Comparison and meta-analysis of microarray data: from the bench to the computer desk. Trends Genet 2003, 19:570-577. 10.1016/j.tig.2003.08.006, 14550631.
-
(2003)
Trends Genet
, vol.19
, pp. 570-577
-
-
Moreau, Y.1
Aerts, S.2
De Moor, B.3
De Strooper, B.4
Dabrowski, M.5
-
57
-
-
53149135477
-
Key Issues in Conducting a Meta-Analysis of Gene Expression Microarray Datasets
-
Ramasamy A, Mondry A, Holmes CC, Altman DG. Key Issues in Conducting a Meta-Analysis of Gene Expression Microarray Datasets. PLoS Med 2008, 5.
-
(2008)
PLoS Med
, vol.5
-
-
Ramasamy, A.1
Mondry, A.2
Holmes, C.C.3
Altman, D.G.4
-
58
-
-
77950839912
-
Using pre-existing microarray datasets to increase experimental power: application to insulin resistance
-
10.1371/journal.pcbi.1000718, 2845644, 20361040
-
Daigle BJ, Deng A, McLaughlin T, Cushman SW, Cam MC, Reaven G, Tsao PS, Altman RB. Using pre-existing microarray datasets to increase experimental power: application to insulin resistance. PLoS Comput Biol 2010, 6:e1000718. 10.1371/journal.pcbi.1000718, 2845644, 20361040.
-
(2010)
PLoS Comput Biol
, vol.6
-
-
Daigle, B.J.1
Deng, A.2
McLaughlin, T.3
Cushman, S.W.4
Cam, M.C.5
Reaven, G.6
Tsao, P.S.7
Altman, R.B.8
-
59
-
-
0019780296
-
Human trophoblast cell-surface antigens defined by monoclonal antibodies
-
10.1073/pnas.78.8.5147, 320350, 7029529
-
Lipinski M, Parks DR, Rouse RV, Herzenberg LA. Human trophoblast cell-surface antigens defined by monoclonal antibodies. Proc Natl Acad Sci USA 1981, 78:5147-5150. 10.1073/pnas.78.8.5147, 320350, 7029529.
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, pp. 5147-5150
-
-
Lipinski, M.1
Parks, D.R.2
Rouse, R.V.3
Herzenberg, L.A.4
-
60
-
-
38649112304
-
TROP2: a novel prognostic marker in squamous cell carcinoma of the oral cavity
-
Fong D, Spizzo G, Gostner JM, Gastl G, Moser P, Krammel C, Gerhard S, Rasse M, Laimer K. TROP2: a novel prognostic marker in squamous cell carcinoma of the oral cavity. Mod Pathol 2008, 21:186-191.
-
(2008)
Mod Pathol
, vol.21
, pp. 186-191
-
-
Fong, D.1
Spizzo, G.2
Gostner, J.M.3
Gastl, G.4
Moser, P.5
Krammel, C.6
Gerhard, S.7
Rasse, M.8
Laimer, K.9
-
61
-
-
53849132678
-
High expression of TROP2 correlates with poor prognosis in pancreatic cancer
-
10.1038/sj.bjc.6604677, 2570520, 18813308
-
Fong D, Moser P, Krammel C, Gostner JM, Margreiter R, Mitterer M, Gastl G, Spizzo G. High expression of TROP2 correlates with poor prognosis in pancreatic cancer. Br J Cancer 2008, 99:1290-1295. 10.1038/sj.bjc.6604677, 2570520, 18813308.
-
(2008)
Br J Cancer
, vol.99
, pp. 1290-1295
-
-
Fong, D.1
Moser, P.2
Krammel, C.3
Gostner, J.M.4
Margreiter, R.5
Mitterer, M.6
Gastl, G.7
Spizzo, G.8
-
62
-
-
33744800782
-
Clinical significance of TROP2 expression in colorectal cancer
-
10.1158/1078-0432.CCR-05-1961, 16707602
-
Ohmachi T, Tanaka F, Mimori K, Inoue H, Yanaga K, Mori M. Clinical significance of TROP2 expression in colorectal cancer. Clin Cancer Res 2006, 12:3057-3063. 10.1158/1078-0432.CCR-05-1961, 16707602.
-
(2006)
Clin Cancer Res
, vol.12
, pp. 3057-3063
-
-
Ohmachi, T.1
Tanaka, F.2
Mimori, K.3
Inoue, H.4
Yanaga, K.5
Mori, M.6
-
63
-
-
61449110944
-
TROP2 expression as prognostic marker for gastric carcinoma
-
Mühlmann G, Spizzo G, Gostner J, Zitt M, Maier H, Moser P, Gastl G, Zitt M, Müller HM, Margreiter R, Ofner D, Fong D. TROP2 expression as prognostic marker for gastric carcinoma. J Clin Pathol 2009, 62:152-158.
-
(2009)
J Clin Pathol
, vol.62
, pp. 152-158
-
-
Mühlmann, G.1
Spizzo, G.2
Gostner, J.3
Zitt, M.4
Maier, H.5
Moser, P.6
Gastl, G.7
Zitt, M.8
Müller, H.M.9
Margreiter, R.10
Ofner, D.11
Fong, D.12
-
64
-
-
39749154101
-
Identification of Trop-2 as an oncogene and an attractive therapeutic target in colon cancers
-
10.1158/1535-7163.MCT-07-2003, 18281513
-
Wang J, Day R, Dong Y, Weintraub SJ, Michel L. Identification of Trop-2 as an oncogene and an attractive therapeutic target in colon cancers. Molecular Cancer Therapeutics 2008, 7:280-285. 10.1158/1535-7163.MCT-07-2003, 18281513.
-
(2008)
Molecular Cancer Therapeutics
, vol.7
, pp. 280-285
-
-
Wang, J.1
Day, R.2
Dong, Y.3
Weintraub, S.J.4
Michel, L.5
-
65
-
-
0038244058
-
Gene expression predictors of breast cancer outcomes
-
Huang E, Cheng SH, Dressman H, Pittman J, Tsou MH, Horng CF, Bild A, Iversen ES, Liao M, Chen CM, West M, Nevins JR, Huang AT. Gene expression predictors of breast cancer outcomes. The Lancet 2003, 361:1590-1596.
-
(2003)
The Lancet
, vol.361
, pp. 1590-1596
-
-
Huang, E.1
Cheng, S.H.2
Dressman, H.3
Pittman, J.4
Tsou, M.H.5
Horng, C.F.6
Bild, A.7
Iversen, E.S.8
Liao, M.9
Chen, C.M.10
West, M.11
Nevins, J.R.12
Huang, A.T.13
-
66
-
-
58549086529
-
Trop2 identifies a subpopulation of murine and human prostate basal cells with stem cell characteristics
-
Goldstein AS, Lawson DA, Cheng D, Sun W, Garraway IP, Witte ON. Trop2 identifies a subpopulation of murine and human prostate basal cells with stem cell characteristics. Proceedings of the National Academy of Sciences 2008, 105:20882-20887.
-
(2008)
Proceedings of the National Academy of Sciences
, vol.105
, pp. 20882-20887
-
-
Goldstein, A.S.1
Lawson, D.A.2
Cheng, D.3
Sun, W.4
Garraway, I.P.5
Witte, O.N.6
-
67
-
-
68349094342
-
Potential hepatic stem cells reside in EpCAM+ cells of normal and injured mouse liver
-
10.1242/dev.031369, 19429791
-
Okabe M, Tsukahara Y, Tanaka M, Suzuki K, Saito S, Kamiya Y, Tsujimura T, Nakamura K, Miyajima A. Potential hepatic stem cells reside in EpCAM+ cells of normal and injured mouse liver. Development 2009, 136:1951-1960. 10.1242/dev.031369, 19429791.
-
(2009)
Development
, vol.136
, pp. 1951-1960
-
-
Okabe, M.1
Tsukahara, Y.2
Tanaka, M.3
Suzuki, K.4
Saito, S.5
Kamiya, Y.6
Tsujimura, T.7
Nakamura, K.8
Miyajima, A.9
-
68
-
-
78650934534
-
Integrated quantitative analysis of the phosphoproteome and transcriptome in tamoxifen-resistant breast cancer
-
10.1074/jbc.M110.156877, 21044952
-
Oyama M, Nagashima T, Suzuki T, Kozuka-Hata H, Yumoto N, Shiraishi Y, Ikeda K, Kuroki Y, Gotoh N, Ishida T, Inoue S, Kitano H, Okada-Hatakeyama M. Integrated quantitative analysis of the phosphoproteome and transcriptome in tamoxifen-resistant breast cancer. J Biol Chem 2011, 286:818-829. 10.1074/jbc.M110.156877, 21044952.
-
(2011)
J Biol Chem
, vol.286
, pp. 818-829
-
-
Oyama, M.1
Nagashima, T.2
Suzuki, T.3
Kozuka-Hata, H.4
Yumoto, N.5
Shiraishi, Y.6
Ikeda, K.7
Kuroki, Y.8
Gotoh, N.9
Ishida, T.10
Inoue, S.11
Kitano, H.12
Okada-Hatakeyama, M.13
-
69
-
-
79952741351
-
Cyclin E amplification/overexpression is a mechanism of trastuzumab resistance in HER2+ breast cancer patients
-
Scaltriti M, Eichhorn PJ, Cortés J, Prudkin L, Aura C, Jiménez J, Chandarlapaty S, Serra V, Prat A, Ibrahim YH, Guzmán M, Gili M, Rodríguez O, Rodríguez S, Pérez J, Green SR, Mai S, Rosen N, Hudis C, Baselga J. Cyclin E amplification/overexpression is a mechanism of trastuzumab resistance in HER2+ breast cancer patients. Proceedings of the National Academy of Sciences 2011, 108:3761-6.
-
(2011)
Proceedings of the National Academy of Sciences
, vol.108
, pp. 3761-3766
-
-
Scaltriti, M.1
Eichhorn, P.J.2
Cortés, J.3
Prudkin, L.4
Aura, C.5
Jiménez, J.6
Chandarlapaty, S.7
Serra, V.8
Prat, A.9
Ibrahim, Y.H.10
Guzmán, M.11
Gili, M.12
Rodríguez, O.13
Rodríguez, S.14
Pérez, J.15
Green, S.R.16
Mai, S.17
Rosen, N.18
Hudis, C.19
Baselga, J.20
more..
-
71
-
-
0033637153
-
Genomic expression programs in the response of yeast cells to environmental changes
-
15070, 11102521
-
Gasch AP, Spellman PT, Kao CM, Carmel-Harel O, Eisen MB, Storz G, Botstein D, Brown PO. Genomic expression programs in the response of yeast cells to environmental changes. Mol Biol Cell 2000, 11:4241-4257. 15070, 11102521.
-
(2000)
Mol Biol Cell
, vol.11
, pp. 4241-4257
-
-
Gasch, A.P.1
Spellman, P.T.2
Kao, C.M.3
Carmel-Harel, O.4
Eisen, M.B.5
Storz, G.6
Botstein, D.7
Brown, P.O.8
-
72
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
-
25624, 9843569
-
Spellman PT, Sherlock G, Zhang MQ, Iyer VR, Anders K, Eisen MB, Brown PO, Botstein D, Futcher B. Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol Biol Cell 1998, 9:3273-3297. 25624, 9843569.
-
(1998)
Mol Biol Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
Brown, P.O.7
Botstein, D.8
Futcher, B.9
-
73
-
-
78651272522
-
YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface
-
3013800, 20972212
-
Abdulrehman D, Monteiro PT, Teixeira MC, Mira NP, Lourenço AB, Dos Santos SC, Cabrito TR, Francisco AP, Madeira SC, Aires RS, Oliveira AL, Sá-Correia I, Freitas AT. YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface. Nucleic Acids Res 2010, 39:D136-140. 3013800, 20972212.
-
(2010)
Nucleic Acids Res
, vol.39
-
-
Abdulrehman, D.1
Monteiro, P.T.2
Teixeira, M.C.3
Mira, N.P.4
Lourenço, A.B.5
Dos Santos, S.C.6
Cabrito, T.R.7
Francisco, A.P.8
Madeira, S.C.9
Aires, R.S.10
Oliveira, A.L.11
Sá-Correia, I.12
Freitas, A.T.13
-
74
-
-
33745220278
-
Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise
-
10.1038/nature04785, 16699522
-
Newman JRS, Ghaemmaghami S, Ihmels J, Breslow DK, Noble M, DeRisi JL, Weissman JS. Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise. Nature 2006, 441:840-846. 10.1038/nature04785, 16699522.
-
(2006)
Nature
, vol.441
, pp. 840-846
-
-
Newman, J.R.S.1
Ghaemmaghami, S.2
Ihmels, J.3
Breslow, D.K.4
Noble, M.5
DeRisi, J.L.6
Weissman, J.S.7
|