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Volumn 6, Issue 10, 2011, Pages

Fitting the elementary rate constants of the p-gp transporter network in the hmdr1-mdck confluent cell monolayer using a particle swarm algorithm

Author keywords

[No Author keywords available]

Indexed keywords

AMPRENAVIR; DIGOXIN; GLYCOPROTEIN P; LOPERAMIDE; QUINIDINE; ADENOSINE TRIPHOSPHATE; CARBAMIC ACID DERIVATIVE; SULFONAMIDE;

EID: 80054741770     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0025086     Document Type: Article
Times cited : (18)

References (42)
  • 2
    • 33644847684 scopus 로고    scopus 로고
    • Transporters as a determinant of drug clearance and tissue distribution
    • Shitara Y, Horiea T, Sugiyama Y, (2006) Transporters as a determinant of drug clearance and tissue distribution. Eur J Pharm Sci 27: 425-446.
    • (2006) Eur J Pharm Sci , vol.27 , pp. 425-446
    • Shitara, Y.1    Horiea, T.2    Sugiyama, Y.3
  • 4
    • 70349451693 scopus 로고    scopus 로고
    • Imaging the function of P-glycoprotein with radiotracers: Pharmacokinetics and in vivo applications
    • Kannan P, John C, Zoghbi SS, Halldin C, Gottesman MM, et al. (2009) Imaging the function of P-glycoprotein with radiotracers: Pharmacokinetics and in vivo applications. Clin Pharmacol Ther 86: 368-377.
    • (2009) Clin Pharmacol Ther , vol.86 , pp. 368-377
    • Kannan, P.1    John, C.2    Zoghbi, S.S.3    Halldin, C.4    Gottesman, M.M.5
  • 5
    • 4744358624 scopus 로고    scopus 로고
    • The ATP switch model for ATP transporters
    • Higgins CF, Linton K, (2004) The ATP switch model for ATP transporters. Nature Struct & Mol Biol 11: 918-926.
    • (2004) Nature Struct & Mol Biol , vol.11 , pp. 918-926
    • Higgins, C.F.1    Linton, K.2
  • 6
    • 32044453808 scopus 로고    scopus 로고
    • Recent progress in understanding the mechanism of P-glycoprotein-mediated drug efflux
    • Loo TW, Clarke DM, (2005) Recent progress in understanding the mechanism of P-glycoprotein-mediated drug efflux. J Membr Biol 206: 173-185.
    • (2005) J Membr Biol , vol.206 , pp. 173-185
    • Loo, T.W.1    Clarke, D.M.2
  • 8
    • 63449139456 scopus 로고    scopus 로고
    • Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding
    • Aller SG, Yu J, Ward A, Weng Y, Chittaboina S, et al. (2009) Structure of P-glycoprotein reveals a molecular basis for poly-specific drug binding. Science 323: 1718.
    • (2009) Science , vol.323 , pp. 1718
    • Aller, S.G.1    Yu, J.2    Ward, A.3    Weng, Y.4    Chittaboina, S.5
  • 9
    • 0030743356 scopus 로고    scopus 로고
    • Competitive, non-competitive and cooperative interactions between substrates of P-glycoprotein as measured by its ATPase activity
    • Litman T, Zeuthen T, Skovsgaard T, Stein WD, (1997) Competitive, non-competitive and cooperative interactions between substrates of P-glycoprotein as measured by its ATPase activity. Biochim Biophys Acta 61: 169-176.
    • (1997) Biochim Biophys Acta , vol.61 , pp. 169-176
    • Litman, T.1    Zeuthen, T.2    Skovsgaard, T.3    Stein, W.D.4
  • 10
    • 0345599865 scopus 로고    scopus 로고
    • Pumping of drugs by P-glycoprotein: A two-step process?
    • Litman T, Skovsgaard T, Stein WD, (2003) Pumping of drugs by P-glycoprotein: A two-step process? J Pharmacol Exp Ther 307: 846-853.
    • (2003) J Pharmacol Exp Ther , vol.307 , pp. 846-853
    • Litman, T.1    Skovsgaard, T.2    Stein, W.D.3
  • 11
    • 0030782511 scopus 로고    scopus 로고
    • Positively cooperative sites for drug transport by P-glycoprotein with distinct drug specificities
    • Shapiro AB, Ling V, (1997) Positively cooperative sites for drug transport by P-glycoprotein with distinct drug specificities. Eur J Biochem 250: 130-137.
    • (1997) Eur J Biochem , vol.250 , pp. 130-137
    • Shapiro, A.B.1    Ling, V.2
  • 12
    • 77956631092 scopus 로고    scopus 로고
    • Quantitative approaches to delineate passive transport mechanisms in cell culture monolayers
    • In: Amidon GL, Lee V, editors, New York, Marcel Dekker
    • Ho NFH, Raub TJ, Burton PS, Bausuhn CL, Adson A, et al. (2000) Quantitative approaches to delineate passive transport mechanisms in cell culture monolayers. In: Amidon GL, Lee V, editors. Transport processes in pharmaceutical systems New York Marcel Dekker pp. 219-316.
    • (2000) Transport Processes in Pharmaceutical Systems , pp. 219-316
    • Ho, N.F.H.1    Raub, T.J.2    Burton, P.S.3    Bausuhn, C.L.4    Adson, A.5
  • 13
    • 0346732289 scopus 로고    scopus 로고
    • Transition state analysis of the coupling of drug transport to ATP hydrolysis by P-glycoprotein
    • Al-Shawi MK, Polar MK, Omote H, Figler RA, (2003) Transition state analysis of the coupling of drug transport to ATP hydrolysis by P-glycoprotein. J Biol Chem 278: 52629-52640.
    • (2003) J Biol Chem , vol.278 , pp. 52629-52640
    • Al-Shawi, M.K.1    Polar, M.K.2    Omote, H.3    Figler, R.A.4
  • 14
    • 34548058440 scopus 로고    scopus 로고
    • Data-based mathematical modeling of vectorial transport across double-transfected polarized cells
    • Bartholome K, Rius M, Letschert K, Keller D, Timmer J, et al. (2007) Data-based mathematical modeling of vectorial transport across double-transfected polarized cells. Drug Metab Dispos 35: 1476-1481.
    • (2007) Drug Metab Dispos , vol.35 , pp. 1476-1481
    • Bartholome, K.1    Rius, M.2    Letschert, K.3    Keller, D.4    Timmer, J.5
  • 15
    • 0025003117 scopus 로고
    • Transepithelial transport of vinblastine by kidney-derived cell lines. Application of a new kinetic model to estimate in situ KM of the pump
    • Horio M, Pastan I, Gottesman MM, Handler JS, (1990) Transepithelial transport of vinblastine by kidney-derived cell lines. Application of a new kinetic model to estimate in situ KM of the pump. Biochim Biophys Acta- Biomembranes 1027: 116-122.
    • (1990) Biochim Biophys Acta - Biomembranes , vol.1027 , pp. 116-122
    • Horio, M.1    Pastan, I.2    Gottesman, M.M.3    Handler, J.S.4
  • 17
    • 27144482673 scopus 로고    scopus 로고
    • Glucuronidation and the transport of the glucuronide metabolites in LLC-PK1 cells
    • Chang JH, Benet LZ, (2005) Glucuronidation and the transport of the glucuronide metabolites in LLC-PK1 cells. Mol Pharm 2: 428-34.
    • (2005) Mol Pharm , vol.2 , pp. 428-434
    • Chang, J.H.1    Benet, L.Z.2
  • 18
    • 27544483787 scopus 로고    scopus 로고
    • Functional assessment of multiple P-glycoprotein probe substrates: Influence of cell line and modulator concentration on P-gp activity
    • Taub ME, Podila L, Ely D, Almeida I, (2005) Functional assessment of multiple P-glycoprotein probe substrates: Influence of cell line and modulator concentration on P-gp activity. Drug Metab Dispos 33: 1679-1687.
    • (2005) Drug Metab Dispos , vol.33 , pp. 1679-1687
    • Taub, M.E.1    Podila, L.2    Ely, D.3    Almeida, I.4
  • 19
    • 33645805657 scopus 로고    scopus 로고
    • In vitro P-glycoprotein inhibition assays for assessment of clinical drug interaction potential of new drug candidates: A recommendation for probe-substrates
    • Rautio J, Humphreys JE, Webster LO, Balakrishnan A, Keogh JP, et al. (2006) In vitro P-glycoprotein inhibition assays for assessment of clinical drug interaction potential of new drug candidates: A recommendation for probe-substrates. Drug Metab Dispos 34: 786-792.
    • (2006) Drug Metab Dispos , vol.34 , pp. 786-792
    • Rautio, J.1    Humphreys, J.E.2    Webster, L.O.3    Balakrishnan, A.4    Keogh, J.P.5
  • 20
    • 52249103044 scopus 로고    scopus 로고
    • P-glycoprotein senses its substrates and the lateral membrane packing density: consequences for the catalytic cycle
    • Aänismaa P, Gatlik-Landwojtowicz E, Seelig A, (2008) P-glycoprotein senses its substrates and the lateral membrane packing density: consequences for the catalytic cycle. Biochemistry 47: 10197-10207.
    • (2008) Biochemistry , vol.47 , pp. 10197-10207
    • Aänismaa, P.1    Gatlik-Landwojtowicz, E.2    Seelig, A.3
  • 21
    • 76749084410 scopus 로고    scopus 로고
    • P-glycoprotein substrate transport assessed by comparing cellular and vesicular ATPase activity
    • Nervi P, Li-Blatter X, Aänismaa P, Seelig A, (2010) P-glycoprotein substrate transport assessed by comparing cellular and vesicular ATPase activity. Biochim Biophys Acta 1798: 515-525.
    • (2010) Biochim Biophys Acta , vol.1798 , pp. 515-525
    • Nervi, P.1    Li-Blatter, X.2    Aänismaa, P.3    Seelig, A.4
  • 22
    • 40549092951 scopus 로고    scopus 로고
    • ATP occlusion by P-glycoprotein as a surrogate measure for drug coupling
    • Tombline G, Holt JJ, Gannon MK, Donnelly DJ, Wetzel B, et al. (2008) ATP occlusion by P-glycoprotein as a surrogate measure for drug coupling. Biochemistry 47: 3294-307.
    • (2008) Biochemistry , vol.47 , pp. 3294-3307
    • Tombline, G.1    Holt, J.J.2    Gannon, M.K.3    Donnelly, D.J.4    Wetzel, B.5
  • 23
    • 11244309507 scopus 로고    scopus 로고
    • The elementary mass action rate constants of P-gp transport for a confluent monolayer of MDCKII-hMDR1 cells
    • Tran TT, Mittal A, Aldinger T, Polli JW, Ayrton A, et al. (2005) The elementary mass action rate constants of P-gp transport for a confluent monolayer of MDCKII-hMDR1 cells. Biophys J 88: 715-738.
    • (2005) Biophys J , vol.88 , pp. 715-738
    • Tran, T.T.1    Mittal, A.2    Aldinger, T.3    Polli, J.W.4    Ayrton, A.5
  • 24
    • 0032885452 scopus 로고    scopus 로고
    • Role of P-glycoprotein-mediated secretion in absorptive drug permeability: An approach using passive membrane permeability and affinity to P-glycoprotein
    • Doppenschmitt S, Spahn-Langguth H, Regårdh GC, Langguth P, (1999) Role of P-glycoprotein-mediated secretion in absorptive drug permeability: An approach using passive membrane permeability and affinity to P-glycoprotein. J Pharm Sci 88: 1067-1072.
    • (1999) J Pharm Sci , vol.88 , pp. 1067-1072
    • Doppenschmitt, S.1    Spahn-Langguth, H.2    Regårdh, G.C.3    Langguth, P.4
  • 25
    • 33846116128 scopus 로고    scopus 로고
    • Kinetic considerations for the quantitative assessment of efflux activity and inhibition: Implications for understanding and predicting the effects of efflux inhibition
    • Kalvass JC, Pollack GM, (2007) Kinetic considerations for the quantitative assessment of efflux activity and inhibition: Implications for understanding and predicting the effects of efflux inhibition. Pharm Res 24: 265-276.
    • (2007) Pharm Res , vol.24 , pp. 265-276
    • Kalvass, J.C.1    Pollack, G.M.2
  • 26
    • 37549046023 scopus 로고    scopus 로고
    • Permeability, Transport, and Metabolism of Solutes in Caco-2 Cell Monolayers: A Theoretical Study
    • Sun H, Pang KS, (2008) Permeability, Transport, and Metabolism of Solutes in Caco-2 Cell Monolayers: A Theoretical Study. Drug Metab Dispos 36: 102-123.
    • (2008) Drug Metab Dispos , vol.36 , pp. 102-123
    • Sun, H.1    Pang, K.S.2
  • 27
    • 25144511902 scopus 로고    scopus 로고
    • The steady-state Michaelis-Menten analysis of P-glycoprotein mediated transport through a confluent cell monolayer cannot predict the correct Michaelis constant KM
    • Bentz J, Tran TT, Polli JW, Ayrton A, Ellens H, (2005) The steady-state Michaelis-Menten analysis of P-glycoprotein mediated transport through a confluent cell monolayer cannot predict the correct Michaelis constant KM. Pharm Res 22: 1667-1677.
    • (2005) Pharm Res , vol.22 , pp. 1667-1677
    • Bentz, J.1    Tran, T.T.2    Polli, J.W.3    Ayrton, A.4    Ellens, H.5
  • 28
    • 76149115533 scopus 로고    scopus 로고
    • If the KI is defined by the free energy of binding to P-gp, what kinetic parameters define the IC50 for the MDCKII-hMDR1 confluent cell monolayer?
    • Lumen AA, Acharya P, Polli JW, Ayrton A, Ellens H, et al. (2010) If the KI is defined by the free energy of binding to P-gp, what kinetic parameters define the IC50 for the MDCKII-hMDR1 confluent cell monolayer? Drug Metab Disp 38: 260-269.
    • (2010) Drug Metab Disp , vol.38 , pp. 260-269
    • Lumen, A.A.1    Acharya, P.2    Polli, J.W.3    Ayrton, A.4    Ellens, H.5
  • 29
    • 33845930340 scopus 로고    scopus 로고
    • P-glycoprotein expressed in a confluent monolayer of hMDR1-MDCKII cells has more than one efflux pathway with cooperative binding sites
    • Acharya P, Tran TT, Polli JW, Ayrton A, Ellens H, et al. (2006) P-glycoprotein expressed in a confluent monolayer of hMDR1-MDCKII cells has more than one efflux pathway with cooperative binding sites. Biochemistry 45: 15505-15519.
    • (2006) Biochemistry , vol.45 , pp. 15505-15519
    • Acharya, P.1    Tran, T.T.2    Polli, J.W.3    Ayrton, A.4    Ellens, H.5
  • 30
    • 38749113348 scopus 로고    scopus 로고
    • Kinetic identification of membrane transporters that assist P-glycoprotein-mediated transport of digoxin and loperamide through a confluent monolayer of MDCKII-hMDR1 cells
    • Acharya P, O'Connor MP, Polli JW, Ayrton A, Ellens H, et al. (2008) Kinetic identification of membrane transporters that assist P-glycoprotein-mediated transport of digoxin and loperamide through a confluent monolayer of MDCKII-hMDR1 cells. Drug Metab Dispos 36: 452-460.
    • (2008) Drug Metab Dispos , vol.36 , pp. 452-460
    • Acharya, P.1    O'Connor, M.P.2    Polli, J.W.3    Ayrton, A.4    Ellens, H.5
  • 31
    • 34548479280 scopus 로고    scopus 로고
    • A particle swarm pattern search method for bound constrained global optimization
    • Vaz A, Vicente L, (2007) A particle swarm pattern search method for bound constrained global optimization. J Global Opt 39: 197-219.
    • (2007) J Global Opt , vol.39 , pp. 197-219
    • Vaz, A.1    Vicente, L.2
  • 32
    • 3843082996 scopus 로고    scopus 로고
    • An exact kinetic analysis of passive transport across a polarized confluent MDCK cell monolayer modeled as a single barrier
    • Tran TT, Mittal A, Gales T, Maleeff B, Aldinger T, et al. (2004) An exact kinetic analysis of passive transport across a polarized confluent MDCK cell monolayer modeled as a single barrier. J Pharm Sci 93: 2108-2123.
    • (2004) J Pharm Sci , vol.93 , pp. 2108-2123
    • Tran, T.T.1    Mittal, A.2    Gales, T.3    Maleeff, B.4    Aldinger, T.5
  • 34
    • 0033952667 scopus 로고    scopus 로고
    • Rate acceleration of ATP hydrolysis by F1Fo-ATP synthase
    • Senior AE, Sashi N, Weber J, (2000) Rate acceleration of ATP hydrolysis by F1Fo-ATP synthase. J Exp Biol 203: 35-40.
    • (2000) J Exp Biol , vol.203 , pp. 35-40
    • Senior, A.E.1    Sashi, N.2    Weber, J.3
  • 35
    • 33751301012 scopus 로고    scopus 로고
    • Phamacophore-based discovery of ligands for drug transporters
    • Chang C, Ekins S, Bahadduri P, Swaan PW, (2006) Phamacophore-based discovery of ligands for drug transporters. Adv Drug Deliv Rev 58: 1431-1450.
    • (2006) Adv Drug Deliv Rev , vol.58 , pp. 1431-1450
    • Chang, C.1    Ekins, S.2    Bahadduri, P.3    Swaan, P.W.4
  • 36
    • 0030971840 scopus 로고    scopus 로고
    • Structure of the multidrug resistance P-glycoprotein to 3.5 nm resolution determi8ned by electron microscopy and image analysis
    • Rosenberg MF, Callaghan R, Ford RC, Higgins CF, (1997) Structure of the multidrug resistance P-glycoprotein to 3.5 nm resolution determi8ned by electron microscopy and image analysis. J Biol Chem 272: 10685-10694.
    • (1997) J Biol Chem , vol.272 , pp. 10685-10694
    • Rosenberg, M.F.1    Callaghan, R.2    Ford, R.C.3    Higgins, C.F.4
  • 37
    • 38349174530 scopus 로고    scopus 로고
    • Effect of P-glycoprotein expression levels on the concentration-dependent permeability of drugs to the cell membrane
    • Shirasaka Y, Sakane T, Yamashita S, (2008) Effect of P-glycoprotein expression levels on the concentration-dependent permeability of drugs to the cell membrane. J Pharm Sci 97: 553-565.
    • (2008) J Pharm Sci , vol.97 , pp. 553-565
    • Shirasaka, Y.1    Sakane, T.2    Yamashita, S.3
  • 38
    • 0033520934 scopus 로고    scopus 로고
    • Large scale purification of detergent-soluble P-glycoprotein from Pichia pastoris cells and characterization of nucleotide binding properties of wild-type, Walker A, and Walker B mutant proteins
    • Lerner-Marmarosh N, Gimi K, Urbatsch IL, Gros P, Senior AE, (1999) Large scale purification of detergent-soluble P-glycoprotein from Pichia pastoris cells and characterization of nucleotide binding properties of wild-type, Walker A, and Walker B mutant proteins. J Biol Chem 274: 34711-34718.
    • (1999) J Biol Chem , vol.274 , pp. 34711-34718
    • Lerner-Marmarosh, N.1    Gimi, K.2    Urbatsch, I.L.3    Gros, P.4    Senior, A.E.5
  • 39
    • 16644374081 scopus 로고    scopus 로고
    • P-glycoprotein retains function when reconstituted into a sphingolipid and cholesterol rich environment
    • Modok S, Heyward C, Callaghan R, (2004) P-glycoprotein retains function when reconstituted into a sphingolipid and cholesterol rich environment. J Lipid Res 45: 1910-1918.
    • (2004) J Lipid Res , vol.45 , pp. 1910-1918
    • Modok, S.1    Heyward, C.2    Callaghan, R.3
  • 40
    • 0032472791 scopus 로고    scopus 로고
    • Effects of cardiovascular drugs on ATPase activity of P-glycoprotein in plasma membranes and in purified reconstituted form
    • Rebbeor JF, Senior AE, (1998) Effects of cardiovascular drugs on ATPase activity of P-glycoprotein in plasma membranes and in purified reconstituted form. Biochim Biophys Acta 1369: 85-93.
    • (1998) Biochim Biophys Acta , vol.1369 , pp. 85-93
    • Rebbeor, J.F.1    Senior, A.E.2
  • 41
    • 0030921564 scopus 로고    scopus 로고
    • The functional purification of P-glycoprotein is dependent on maintenance of a lipid - protein interface
    • Callaghan R, Berridge G, Ferry DR, Higgins CF, (1997) The functional purification of P-glycoprotein is dependent on maintenance of a lipid - protein interface. Biochim Biophys Acta 1328: 109-124.
    • (1997) Biochim Biophys Acta , vol.1328 , pp. 109-124
    • Callaghan, R.1    Berridge, G.2    Ferry, D.R.3    Higgins, C.F.4
  • 42
    • 73649111071 scopus 로고    scopus 로고
    • Understanding polyspecificity of multidrug ABC transporters: closing in on the gaps in ABCB1
    • Gutmann DAP, Ward A, Urbatsch IL, Chang G, van Veen HW, (2010) Understanding polyspecificity of multidrug ABC transporters: closing in on the gaps in ABCB1. Trends Biochem Sci 35: 36-42.
    • (2010) Trends Biochem Sci , vol.35 , pp. 36-42
    • Gutmann, D.A.P.1    Ward, A.2    Urbatsch, I.L.3    Chang, G.4    van Veen, H.W.5


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