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Volumn 193, Issue 19, 2011, Pages 5400-5411

Characterization of Escherichia coli UmuC active-site loops identifies variants that confer UV hypersensitivity

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE;

EID: 80053579394     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.05301-11     Document Type: Article
Times cited : (8)

References (83)
  • 1
    • 31544450286 scopus 로고    scopus 로고
    • Construction of Escherichia coli K-12 in-frame, singlegene knockout mutants: the Keio collection
    • 2006.0008
    • Baba, T., et al 2006. Construction of Escherichia coli K-12 in-frame, singlegene knockout mutants: the Keio collection. Mol. Syst. Biol. 2:2006.0008.
    • (2006) Mol. Syst. Biol. , vol.2
    • Baba, T.1
  • 2
    • 0037566670 scopus 로고    scopus 로고
    • Structural insights into the origins of DNA polymerase fidelity
    • Beard, W. A., and S. H. Wilson 2003. Structural insights into the origins of DNA polymerase fidelity. Structure 11:489-496.
    • (2003) Structure , vol.11 , pp. 489-496
    • Beard, W.A.1    Wilson, S.H.2
  • 3
    • 0033607496 scopus 로고    scopus 로고
    • SOS mutagenesis results from upregulation of translesion synthesis
    • Becherel, O. J., and R. P. Fuchs 1999. SOS mutagenesis results from upregulation of translesion synthesis. J. Mol. Biol. 294:299-306.
    • (1999) J. Mol. Biol. , vol.294 , pp. 299-306
    • Becherel, O.J.1    Fuchs, R.P.2
  • 4
    • 0037019606 scopus 로고    scopus 로고
    • Pivotal role of the beta-clamp in translesion DNA synthesis and mutagenesis in E. coli cells
    • Becherel, O. J., R. P. P. Fuchs, and J. Wagner 2002. Pivotal role of the beta-clamp in translesion DNA synthesis and mutagenesis in E. coli cells. DNA Repair (Amst.) 1:703-708.
    • (2002) DNA Repair (Amst.) , vol.1 , pp. 703-708
    • Becherel, O.J.1    Fuchs, R.P.P.2    Wagner, J.3
  • 5
    • 70349156469 scopus 로고    scopus 로고
    • Characterization of novel alleles of the Escherichia coli umuDC genes identifies additional interaction sites of UmuC with the beta clamp
    • Beuning, P. J., et al 2009. Characterization of novel alleles of the Escherichia coli umuDC genes identifies additional interaction sites of UmuC with the beta clamp. J. Bacteriol. 191:5910-5920.
    • (2009) J. Bacteriol. , vol.191 , pp. 5910-5920
    • Beuning, P.J.1
  • 6
    • 33645064547 scopus 로고    scopus 로고
    • Two processivity clamp interactions differentially alter the dual activities of UmuC
    • Beuning, P. J., D. Sawicka, D. Barsky, and G. C. Walker 2006. Two processivity clamp interactions differentially alter the dual activities of UmuC. Mol. Microbiol. 59:460-474.
    • (2006) Mol. Microbiol. , vol.59 , pp. 460-474
    • Beuning, P.J.1    Sawicka, D.2    Barsky, D.3    Walker, G.C.4
  • 7
    • 33745021288 scopus 로고    scopus 로고
    • Characterization of Escherichia coli translesion synthesis polymerases and their accessory factors
    • Beuning, P. J., S. M. Simon, V. G. Godoy, D. F. Jarosz, and G. C. Walker 2006. Characterization of Escherichia coli translesion synthesis polymerases and their accessory factors. Methods Enzymol. 408:318-340.
    • (2006) Methods Enzymol , vol.408 , pp. 318-340
    • Beuning, P.J.1    Simon, S.M.2    Godoy, V.G.3    Jarosz, D.F.4    Walker, G.C.5
  • 9
    • 77953924511 scopus 로고    scopus 로고
    • Structure and mechanism of human DNA polymerase eta
    • Biertumpfel, C., et al. 2010. Structure and mechanism of human DNA polymerase eta. Nature 465:1044-1048.
    • (2010) Nature , vol.465 , pp. 1044-1048
    • Biertumpfel, C.1
  • 11
    • 0037198267 scopus 로고    scopus 로고
    • Structure-based interpretation of missense mutations in Y-family DNA polymerases and their implications for polymerase function and lesion bypass
    • Boudsocq, F., H. Ling, W. Yang, and R. Woodgate 2002. Structure-based interpretation of missense mutations in Y-family DNA polymerases and their implications for polymerase function and lesion bypass. DNA Repair (Amst.) 1:343-358.
    • (2002) DNA Repair (Amst.) , vol.1 , pp. 343-358
    • Boudsocq, F.1    Ling, H.2    Yang, W.3    Woodgate, R.4
  • 12
    • 0024121565 scopus 로고
    • UmuD mutagenesis protein of Escherichia coli: overproduction, purification, and cleavage by RecA
    • Burckhardt, S. E., R. Woodgate, R. H. Scheuermann, and H. Echols 1988. UmuD mutagenesis protein of Escherichia coli: overproduction, purification, and cleavage by RecA. Proc. Natl. Acad. Sci. U. S. A. 85:1811-1815.
    • (1988) Proc. Natl. Acad. Sci. U. S. A. , vol.85 , pp. 1811-1815
    • Burckhardt, S.E.1    Woodgate, R.2    Scheuermann, R.H.3    Echols, H.4
  • 13
    • 79955924958 scopus 로고    scopus 로고
    • Architecture of y-family DNA polymerases relevant to translesion DNA synthesis as revealed in structural and molecular modeling studies
    • pii=784081
    • Chandani, S., C. Jacobs, and E. L. Loechler 2010. Architecture of y-family DNA polymerases relevant to translesion DNA synthesis as revealed in structural and molecular modeling studies. J. Nucleic Acids 2010: pii 784081.
    • (2010) J. Nucleic Acids , vol.2010
    • Chandani, S.1    Jacobs, C.2    Loechler, E.L.3
  • 14
    • 61449241642 scopus 로고    scopus 로고
    • Y-family DNA polymerases may use two different dNTP shapes for insertion: a hypothesis and its implications
    • Chandani, S., and E. L. Loechler 2009. Y-family DNA polymerases may use two different dNTP shapes for insertion: a hypothesis and its implications. J. Mol. Graph. Model. 27:759-769.
    • (2009) J. Mol. Graph. Model. , vol.27 , pp. 759-769
    • Chandani, S.1    Loechler, E.L.2
  • 15
    • 0021714276 scopus 로고
    • A pSC101-derived plasmid which shows no sequence homology to other commonly used cloning vectors
    • Churchward, G., D. Belin, and Y. Nagamine 1984. A pSC101-derived plasmid which shows no sequence homology to other commonly used cloning vectors. Gene 31:165-171.
    • (1984) Gene , vol.31 , pp. 165-171
    • Churchward, G.1    Belin, D.2    Nagamine, Y.3
  • 16
    • 21344460325 scopus 로고    scopus 로고
    • Inhibition of mutation and combating the evolution of antibiotic resistance
    • Cirz, R. T., et al 2005. Inhibition of mutation and combating the evolution of antibiotic resistance. PLoS Biol. 3:e176.
    • (2005) PLoS Biol , vol.3
    • Cirz, R.T.1
  • 17
    • 33846252282 scopus 로고    scopus 로고
    • Complete and SOS-mediated response of Staphylococcus aureus to the antibiotic ciprofloxacin
    • Cirz, R. T., et al 2007. Complete and SOS-mediated response of Staphylococcus aureus to the antibiotic ciprofloxacin. J. Bacteriol. 189:531-539.
    • (2007) J. Bacteriol. , vol.189 , pp. 531-539
    • Cirz, R.T.1
  • 18
    • 0033538493 scopus 로고    scopus 로고
    • Stopping DNA replication in its tracks
    • Cleaver, J. E 1999. Stopping DNA replication in its tracks. Science 285:212- 213.
    • (1999) Science , vol.285 , pp. 212-213
    • Cleaver, J.E.1
  • 19
    • 33745153750 scopus 로고    scopus 로고
    • Nascent DNA processing by RecJ favors lesion repair over translesion synthesis at arrested replication forks in Escherichia coli
    • Courcelle, C. T., K. H. Chow, A. Casey, and J. Courcelle 2006. Nascent DNA processing by RecJ favors lesion repair over translesion synthesis at arrested replication forks in Escherichia coli. Proc. Natl. Acad. Sci. U. S. A. 103:9154- 9159.
    • (2006) Proc. Natl. Acad. Sci. U. S. A. , vol.103 , pp. 9154-9159
    • Courcelle, C.T.1    Chow, K.H.2    Casey, A.3    Courcelle, J.4
  • 20
  • 21
    • 0034737314 scopus 로고    scopus 로고
    • Visualization of two binding sites for the Escherichia coli UmuD′(2)C complex (DNA pol V) on RecA-ssDNA filaments
    • Frank, E. G., et al 2000. Visualization of two binding sites for the Escherichia coli UmuD′(2)C complex (DNA pol V) on RecA-ssDNA filaments. J. Mol. Biol. 297:585-597.
    • (2000) J. Mol. Biol. , vol.297 , pp. 585-597
    • Frank, E.G.1
  • 23
    • 70349296874 scopus 로고    scopus 로고
    • Biochemical basis for the essential genetic requirements of RecA and the beta-clamp in Pol V activation
    • Fujii, S., and R. P. Fuchs 2009. Biochemical basis for the essential genetic requirements of RecA and the beta-clamp in Pol V activation. Proc. Natl. Acad. Sci. U. S. A. 106:14825-14830.
    • (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 14825-14830
    • Fujii, S.1    Fuchs, R.P.2
  • 24
    • 9144264274 scopus 로고    scopus 로고
    • Defining the position of the switches between replicative and bypass DNA polymerases
    • Fujii, S., and R. P. Fuchs 2004. Defining the position of the switches between replicative and bypass DNA polymerases. EMBO J. 23:4342-4352.
    • (2004) EMBO J , vol.23 , pp. 4342-4352
    • Fujii, S.1    Fuchs, R.P.2
  • 25
    • 3342995284 scopus 로고    scopus 로고
    • The biochemical requirements of DNA polymerase V-mediated translesion synthesis revisited
    • Fujii, S., V. Gasser, and R. P. Fuchs 2004. The biochemical requirements of DNA polymerase V-mediated translesion synthesis revisited. J. Mol. Biol. 341:405-417.
    • (2004) J. Mol. Biol. , vol.341 , pp. 405-417
    • Fujii, S.1    Gasser, V.2    Fuchs, R.P.3
  • 26
    • 0037126608 scopus 로고    scopus 로고
    • Mutations in human DNA polymerase eta motif II alter bypass of DNA lesions
    • Glick, E., K. L. Vigna, and L. A. Loeb 2001. Mutations in human DNA polymerase eta motif II alter bypass of DNA lesions. EMBO J 20:7303- 7312.
    • (2001) EMBO J , vol.20 , pp. 7303-7312
    • Glick, E.1    Vigna, K.L.2    Loeb, L.A.3
  • 27
    • 0030479442 scopus 로고    scopus 로고
    • Analysis of the region between amino acids 30 and 42 of intact UmuD by a monocysteine approach
    • Guzzo, A., M. H. Lee, K. Oda, and G. C. Walker 1996. Analysis of the region between amino acids 30 and 42 of intact UmuD by a monocysteine approach. J. Bacteriol. 178:7295-7303.
    • (1996) J. Bacteriol. , vol.178 , pp. 7295-7303
    • Guzzo, A.1    Lee, M.H.2    Oda, K.3    Walker, G.C.4
  • 30
    • 30544445218 scopus 로고    scopus 로고
    • A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates
    • Jarosz, D. F., V. G. Godoy, J. C. Delaney, J. M. Essigmann, and G. C. Walker 2006. A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates. Nature 439:225-228.
    • (2006) Nature , vol.439 , pp. 225-228
    • Jarosz, D.F.1    Godoy, V.G.2    Delaney, J.C.3    Essigmann, J.M.4    Walker, G.C.5
  • 31
    • 67650831457 scopus 로고    scopus 로고
    • The active form of DNA polymerase V is UmuD′(2)C-RecA-ATP
    • Jiang, Q., K. Karata, R. Woodgate, M. M. Cox, and M. F. Goodman 2009. The active form of DNA polymerase V is UmuD′(2)C-RecA-ATP. Nature 460:359-363.
    • (2009) Nature , vol.460 , pp. 359-363
    • Jiang, Q.1    Karata, K.2    Woodgate, R.3    Cox, M.M.4    Goodman, M.F.5
  • 32
    • 0033538470 scopus 로고    scopus 로고
    • hRAD30 mutations in the variant form of xeroderma pigmentosum
    • Johnson, R. E., C. M. Kondratick, S. Prakash, and L. Prakash 1999. hRAD30 mutations in the variant form of xeroderma pigmentosum. Science 285:263-265.
    • (1999) Science , vol.285 , pp. 263-265
    • Johnson, R.E.1    Kondratick, C.M.2    Prakash, S.3    Prakash, L.4
  • 34
    • 0037388383 scopus 로고    scopus 로고
    • Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations
    • Johnson, S. J., J. S. Taylor, and L. S. Beese 2003. Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations. Proc. Natl. Acad. Sci. U. S. A. 100:3895-3900.
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 3895-3900
    • Johnson, S.J.1    Taylor, J.S.2    Beese, L.S.3
  • 35
    • 0003890119 scopus 로고
    • (ed. ), 2nd ed. W. H. Freeman & Company, New York, NY.
    • Kornberg, A., and T. A. Baker (ed.) 1992. DNA replication, 2nd ed. W. H. Freeman & Company, New York, NY.
    • (1992) DNA replication
    • Kornberg, A.1    Baker, T.A.2
  • 36
    • 0025375829 scopus 로고
    • Mutation frequency and spectrum resulting from a single abasic site in a singlestranded vector
    • Lawrence, C. W., A. Borden, S. K. Banerjee, and J. E. LeClerc 1990. Mutation frequency and spectrum resulting from a single abasic site in a singlestranded vector. Nucleic Acids Res. 18:2153-2157.
    • (1990) Nucleic Acids Res , vol.18 , pp. 2153-2157
    • Lawrence, C.W.1    Borden, A.2    Banerjee, S.K.3    LeClerc, J.E.4
  • 37
    • 0033736066 scopus 로고    scopus 로고
    • The processing of a benzo (a) pyrene adduct into a frameshift or a base substitution mutation requires a different set of genes in Escherichia coli
    • Lenne-Samuel, N., R. Janel-Bintz, A. Kolbanovskiy, N. E. Geacintov, and R. P. Fuchs 2000. The processing of a benzo (a) pyrene adduct into a frameshift or a base substitution mutation requires a different set of genes in Escherichia coli. Mol. Microbiol. 38:299-307.
    • (2000) Mol. Microbiol. , vol.38 , pp. 299-307
    • Lenne-Samuel, N.1    Janel-Bintz, R.2    Kolbanovskiy, A.3    Geacintov, N.E.4    Fuchs, R.P.5
  • 38
    • 0026674737 scopus 로고
    • DNA replication defect in Salmonella typhimurium mutants lacking the editing (epsilon) subunit of DNA polymerase III
    • Lifsics, M. R., E. D. Lancy, Jr., and R. Maurer 1992. DNA replication defect in Salmonella typhimurium mutants lacking the editing (epsilon) subunit of DNA polymerase III. J. Bacteriol. 174:6965-6973.
    • (1992) J. Bacteriol. , vol.174 , pp. 6965-6973
    • Lifsics, M.R.1    Lancy Jr., E.D.2    Maurer, R.3
  • 39
    • 0035812849 scopus 로고    scopus 로고
    • Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication
    • Ling, H., F. Boudsocq, R. Woodgate, and W. Yang 2001. Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication. Cell 107:91-102.
    • (2001) Cell , vol.107 , pp. 91-102
    • Ling, H.1    Boudsocq, F.2    Woodgate, R.3    Yang, W.4
  • 40
    • 0022453793 scopus 로고
    • Replication of UV-irradiated single-stranded DNA by DNA polymerase III holoenzyme of Escherichia coli: evidence for bypass of pyrimidine photodimers
    • Livneh, Z 1986. Replication of UV-irradiated single-stranded DNA by DNA polymerase III holoenzyme of Escherichia coli: evidence for bypass of pyrimidine photodimers. Proc. Natl. Acad. Sci. U. S. A. 83:4599-4603.
    • (1986) Proc. Natl. Acad. Sci. U. S. A. , vol.83 , pp. 4599-4603
    • Livneh, Z.1
  • 41
    • 0348134870 scopus 로고    scopus 로고
    • Competitive processivity-clamp usage by DNA polymerases during DNA replication and repair
    • Lopez de Saro, F. J., R. E. Georgescu, M. F. Goodman, and M. O'Donnell 2003. Competitive processivity-clamp usage by DNA polymerases during DNA replication and repair. EMBO J. 22:6408-6418.
    • (2003) EMBO J , vol.22 , pp. 6408-6418
    • Lopez de Saro, F.J.1    Georgescu, R.E.2    Goodman, M.F.3    O'Donnell, M.4
  • 42
    • 0037016026 scopus 로고    scopus 로고
    • Analysis of the stimulation of DNA polymerase V of Escherichia coli by processivity proteins
    • Maor-Shoshani, A., and Z. Livneh 2002. Analysis of the stimulation of DNA polymerase V of Escherichia coli by processivity proteins. Biochemistry 41: 14438-14446.
    • (2002) Biochemistry , vol.41 , pp. 14438-14446
    • Maor-Shoshani, A.1    Livneh, Z.2
  • 43
    • 0034660259 scopus 로고    scopus 로고
    • Mechanisms of accurate translesion synthesis by human DNA polymerase eta
    • Masutani, C., R. Kusumoto, S. Iwai, and F. Hanaoka 2000. Mechanisms of accurate translesion synthesis by human DNA polymerase eta. EMBO J 19:3100-3109.
    • (2000) EMBO J , vol.19 , pp. 3100-3109
    • Masutani, C.1    Kusumoto, R.2    Iwai, S.3    Hanaoka, F.4
  • 44
    • 0033578040 scopus 로고    scopus 로고
    • The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase eta
    • Masutani, C., et al 1999. The XPV (xeroderma pigmentosum variant) gene encodes human DNA polymerase eta. Nature 399:700-704.
    • (1999) Nature , vol.399 , pp. 700-704
    • Masutani, C.1
  • 45
  • 46
    • 0024121518 scopus 로고
    • RecAmediated cleavage activates UmuD for mutagenesis: mechanistic relationship between transcriptional derepression and posttranslational activation
    • Nohmi, T., J. R. Battista, L. A. Dodson, and G. C. Walker 1988. RecAmediated cleavage activates UmuD for mutagenesis: mechanistic relationship between transcriptional derepression and posttranslational activation. Proc. Natl. Acad. Sci. U. S. A. 85:1816-1820.
    • (1988) Proc. Natl. Acad. Sci. U. S. A. , vol.85 , pp. 1816-1820
    • Nohmi, T.1    Battista, J.R.2    Dodson, L.A.3    Walker, G.C.4
  • 47
    • 17944380943 scopus 로고    scopus 로고
    • The Y-family of DNA polymerases
    • Ohmori, H., et al 2001. The Y-family of DNA polymerases. Mol. Cell 8:7-8.
    • (2001) Mol. Cell , vol.8 , pp. 7-8
    • Ohmori, H.1
  • 48
    • 79952780138 scopus 로고    scopus 로고
    • The dimeric SOS mutagenesis protein UmuD is active as a monomer
    • Ollivierre, J. N., J. L. Sikora, and P. J. Beuning 2011. The dimeric SOS mutagenesis protein UmuD is active as a monomer. J. Biol. Chem. 286:3607- 3617.
    • (2011) J. Biol. Chem. , vol.286 , pp. 3607-3617
    • Ollivierre, J.N.1    Sikora, J.L.2    Beuning, P.J.3
  • 49
    • 67749113270 scopus 로고    scopus 로고
    • Nucleotide excision repair is a predominant mechanism for processing nitrofurazone-induced DNA damage in Escherichia coli
    • Ona, K. R., C. T. Courcelle, and J. Courcelle 2009. Nucleotide excision repair is a predominant mechanism for processing nitrofurazone-induced DNA damage in Escherichia coli. J. Bacteriol 191:4959-4965.
    • (2009) J. Bacteriol , vol.191 , pp. 4959-4965
    • Ona, K.R.1    Courcelle, C.T.2    Courcelle, J.3
  • 51
    • 0029745671 scopus 로고    scopus 로고
    • The genetic requirements for UmuDC-mediated cold sensitivity are distinct from those for SOS mutagenesis
    • Opperman, T., S. Murli, and G. C. Walker 1996. The genetic requirements for UmuDC-mediated cold sensitivity are distinct from those for SOS mutagenesis. J. Bacteriol. 178:4400-4411.
    • (1996) J. Bacteriol. , vol.178 , pp. 4400-4411
    • Opperman, T.1    Murli, S.2    Walker, G.C.3
  • 52
    • 0037115955 scopus 로고    scopus 로고
    • How DNA lesions are turned into mutations within cells?
    • Pages, V., and R. P. Fuchs 2002. How DNA lesions are turned into mutations within cells? Oncogene 21:8957-8966.
    • (2002) Oncogene , vol.21 , pp. 8957-8966
    • Pages, V.1    Fuchs, R.P.2
  • 53
    • 24044500612 scopus 로고    scopus 로고
    • Pol III proofreading activity prevents lesion bypass as evidenced by its molecular signature within E. coli cells
    • Pages, V., R. Janel-Bintz, and R. P. Fuchs 2005. Pol III proofreading activity prevents lesion bypass as evidenced by its molecular signature within E. coli cells. J. Mol. Biol. 352:501-509.
    • (2005) J. Mol. Biol. , vol.352 , pp. 501-509
    • Pages, V.1    Janel-Bintz, R.2    Fuchs, R.P.3
  • 54
    • 0035906661 scopus 로고    scopus 로고
    • Prokaryotic DNA polymerase I: evolution, structure, and "base flipping" mechanism for nucleotide selection
    • Patel, P. H., M. Suzuki, E. Adman, A. Shinkai, and L. A. Loeb 2001. Prokaryotic DNA polymerase I: evolution, structure, and "base flipping" mechanism for nucleotide selection. J. Mol. Biol. 308:823-837.
    • (2001) J. Mol. Biol. , vol.308 , pp. 823-837
    • Patel, P.H.1    Suzuki, M.2    Adman, E.3    Shinkai, A.4    Loeb, L.A.5
  • 55
    • 0000155801 scopus 로고
    • Phenomenology of an inducible mutagenic DNA repair pathway in Escherichia coli: SOS repair hypothesis
    • L. Prakash et al. (ed.), xv, 289. Thomas, Springfield, IL
    • Radman, M 1974. Phenomenology of an inducible mutagenic DNA repair pathway in Escherichia coli: SOS repair hypothesis, p. xv, 289. In L. Prakash et al. (ed.), Molecular and environmental aspects of mutagenesis. Thomas, Springfield, IL.
    • (1974) Molecular and environmental aspects of mutagenesis
    • Radman, M.1
  • 56
    • 0032484207 scopus 로고    scopus 로고
    • Modulation of RecA nucleoprotein function by the mutagenic UmuD′C protein complex
    • Rehrauer, W. M., I. Bruck, R. Woodgate, M. F. Goodman, and S. C. Kowalczykowski 1998. Modulation of RecA nucleoprotein function by the mutagenic UmuD′C protein complex. J. Biol. Chem. 273:32384-32387.
    • (1998) J. Biol. Chem. , vol.273 , pp. 32384-32387
    • Rehrauer, W.M.1    Bruck, I.2    Woodgate, R.3    Goodman, M.F.4    Kowalczykowski, S.C.5
  • 57
    • 0033527533 scopus 로고    scopus 로고
    • The mutagenesis protein UmuC is a DNA polymerase activated by UmuD′, RecA, and SSB and is specialized for translesion replication
    • Reuven, N. B., G. Arad, A. Maor-Shoshani, and Z. Livneh 1999. The mutagenesis protein UmuC is a DNA polymerase activated by UmuD′, RecA, and SSB and is specialized for translesion replication. J. Biol. Chem. 274: 31763-31766.
    • (1999) J. Biol. Chem. , vol.274 , pp. 31763-31766
    • Reuven, N.B.1    Arad, G.2    Maor-Shoshani, A.3    Livneh, Z.4
  • 58
    • 0035937141 scopus 로고    scopus 로고
    • Lesion bypass by the Escherichia coli DNA polymerase V requires assembly of a RecA nucleoprotein filament
    • Reuven, N. B., G. Arad, A. Z. Stasiak, A. Stasiak, and Z. Livneh 2001. Lesion bypass by the Escherichia coli DNA polymerase V requires assembly of a RecA nucleoprotein filament. J. Biol. Chem. 276:5511-5517.
    • (2001) J. Biol. Chem. , vol.276 , pp. 5511-5517
    • Reuven, N.B.1    Arad, G.2    Stasiak, A.Z.3    Stasiak, A.4    Livneh, Z.5
  • 60
    • 33747862944 scopus 로고    scopus 로고
    • RecA acts in trans to allow replication of damaged DNA by DNA polymerase V
    • Schlacher, K., M. M. Cox, R. Woodgate, and M. F. Goodman 2006. RecA acts in trans to allow replication of damaged DNA by DNA polymerase V. Nature 442:883-887.
    • (2006) Nature , vol.442 , pp. 883-887
    • Schlacher, K.1    Cox, M.M.2    Woodgate, R.3    Goodman, M.F.4
  • 61
    • 13944270317 scopus 로고    scopus 로고
    • DNA polymerase V and RecA protein, a minimal mutasome
    • Schlacher, K., et al 2005. DNA polymerase V and RecA protein, a minimal mutasome. Mol. Cell 17:561-572.
    • (2005) Mol. Cell , vol.17 , pp. 561-572
    • Schlacher, K.1
  • 62
    • 68949218762 scopus 로고    scopus 로고
    • Amino acid architecture that influences dNTP insertion efficiency in Y-family DNA polymerase V of E. coli
    • Seo, K. Y., et al 2009. Amino acid architecture that influences dNTP insertion efficiency in Y-family DNA polymerase V of E. coli. J. Mol. Biol. 392:270-282.
    • (2009) J. Mol. Biol. , vol.392 , pp. 270-282
    • Seo, K.Y.1
  • 63
    • 0037085366 scopus 로고    scopus 로고
    • Efficiency and accuracy of SOS-induced DNA polymerases replicating benzo[a]pyrene-7,8-diol 9,10-epoxide A and G adducts
    • Shen, X., et al 2002. Efficiency and accuracy of SOS-induced DNA polymerases replicating benzo[a]pyrene-7,8-diol 9,10-epoxide A and G adducts. J. Biol. Chem. 277:5265-5274.
    • (2002) J. Biol. Chem. , vol.277 , pp. 5265-5274
    • Shen, X.1
  • 65
  • 67
    • 0028055071 scopus 로고
    • holE, the gene coding for the theta subunit of DNA polymerase III of Escherichia coli: characterization of a holE mutant and comparison with a dnaQ (epsilonsubunit) mutant
    • Slater, S. C., M. R. Lifsics, M. O'Donnell, and R. Maurer 1994. holE, the gene coding for the theta subunit of DNA polymerase III of Escherichia coli: characterization of a holE mutant and comparison with a dnaQ (epsilonsubunit) mutant. J. Bacteriol. 176:815-821.
    • (1994) J. Bacteriol. , vol.176 , pp. 815-821
    • Slater, S.C.1    Lifsics, M.R.2    O'Donnell, M.3    Maurer, R.4
  • 68
    • 0027729063 scopus 로고
    • The appearance of the UmuD′C protein complex in Escherichia coli switches repair from homologous recombination to SOS mutagenesis
    • Sommer, S., A. Bailone, and R. Devoret 1993. The appearance of the UmuD′C protein complex in Escherichia coli switches repair from homologous recombination to SOS mutagenesis. Mol. Microbiol. 10:963-971.
    • (1993) Mol. Microbiol. , vol.10 , pp. 963-971
    • Sommer, S.1    Bailone, A.2    Devoret, R.3
  • 69
    • 0031944934 scopus 로고    scopus 로고
    • Specific RecA amino acid changes affect RecA-UmuD′C interaction
    • Sommer, S., F. Boudsocq, R. Devoret, and A. Bailone 1998. Specific RecA amino acid changes affect RecA-UmuD′C interaction. Mol. Microbiol. 28: 281-291.
    • (1998) Mol. Microbiol. , vol.28 , pp. 281-291
    • Sommer, S.1    Boudsocq, F.2    Devoret, R.3    Bailone, A.4
  • 70
    • 0034120803 scopus 로고    scopus 로고
    • Specific amino acid changes enhance the anti-recombination activity of the UmuD′C complex
    • Sommer, S., G. Coste, and A. Bailone 2000. Specific amino acid changes enhance the anti-recombination activity of the UmuD′C complex. Mol. Microbiol. 35:1443-1453.
    • (2000) Mol. Microbiol. , vol.35 , pp. 1443-1453
    • Sommer, S.1    Coste, G.2    Bailone, A.3
  • 71
    • 0027299907 scopus 로고
    • Induction of only one SOS operon, umuDC, is required for SOS mutagenesis in Escherichia coli
    • Sommer, S., J. Knezevic, A. Bailone, and R. Devoret 1993. Induction of only one SOS operon, umuDC, is required for SOS mutagenesis in Escherichia coli. Mol. Gen. Genet. 239:137-144.
    • (1993) Mol. Gen. Genet. , vol.239 , pp. 137-144
    • Sommer, S.1    Knezevic, J.2    Bailone, A.3    Devoret, R.4
  • 72
    • 0026111317 scopus 로고
    • The 'A rule' of mutagen specificity: a consequence of DNA polymerase bypass of non-instructional lesions?
    • Strauss, B. S 1991. The 'A rule' of mutagen specificity: a consequence of DNA polymerase bypass of non-instructional lesions? Bioessays 13:79-84.
    • (1991) Bioessays , vol.13 , pp. 79-84
    • Strauss, B.S.1
  • 73
    • 15944400711 scopus 로고    scopus 로고
    • Mutant forms of the Escherichia coli beta sliding clamp that distinguish between its roles in replication and DNA polymerase V-dependent translesion DNA synthesis
    • Sutton, M. D., J. M. Duzen, and R. W. Maul 2005. Mutant forms of the Escherichia coli beta sliding clamp that distinguish between its roles in replication and DNA polymerase V-dependent translesion DNA synthesis. Mol. Microbiol. 55:1751-1766.
    • (2005) Mol. Microbiol. , vol.55 , pp. 1751-1766
    • Sutton, M.D.1    Duzen, J.M.2    Maul, R.W.3
  • 74
    • 0035185616 scopus 로고    scopus 로고
    • Genetic and biochemical characterization of a novel umuD mutation: insights into a mechanism for UmuD self-cleavage
    • Sutton, M. D., M. Kim, and G. C. Walker 2001. Genetic and biochemical characterization of a novel umuD mutation: insights into a mechanism for UmuD self-cleavage. J. Bacteriol. 183:347-357.
    • (2001) J. Bacteriol. , vol.183 , pp. 347-357
    • Sutton, M.D.1    Kim, M.2    Walker, G.C.3
  • 75
    • 0029916565 scopus 로고    scopus 로고
    • Substitution of mucAB or rumAB for umuDC alters the relative frequencies of the two classes of mutations induced by a site-specific T-T cyclobutane dimer and the efficiency of translesion DNA synthesis
    • Szekeres, E. S., Jr., R. Woodgate, and C. W. Lawrence 1996. Substitution of mucAB or rumAB for umuDC alters the relative frequencies of the two classes of mutations induced by a site-specific T-T cyclobutane dimer and the efficiency of translesion DNA synthesis. J. Bacteriol. 178:2559-2563.
    • (1996) J. Bacteriol. , vol.178 , pp. 2559-2563
    • Szekeres Jr., E.S.1    Woodgate, R.2    Lawrence, C.W.3
  • 76
    • 0029587614 scopus 로고
    • In vitro inhibition of RecA-mediated homologous pairing by UmuD′C proteins
    • Szpilewska, H., P. Bertrand, A. Bailone, and M. Dutreix 1995. In vitro inhibition of RecA-mediated homologous pairing by UmuD′C proteins. Biochimie 77:848-853.
    • (1995) Biochimie , vol.77 , pp. 848-853
    • Szpilewska, H.1    Bertrand, P.2    Bailone, A.3    Dutreix, M.4
  • 77
    • 0034720286 scopus 로고    scopus 로고
    • Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis
    • Tang, M., et al 2000. Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis. Nature 404:1014-1018.
    • (2000) Nature , vol.404 , pp. 1014-1018
    • Tang, M.1
  • 78
    • 0033529763 scopus 로고    scopus 로고
    • UmuD′(2)C is an error-prone DNA polymerase, Escherichia coli pol V
    • Tang, M., et al 1999. UmuD′(2)C is an error-prone DNA polymerase, Escherichia coli pol V. Proc. Natl. Acad. Sci. U. S. A. 96:8919-8924.
    • (1999) Proc. Natl. Acad. Sci. U. S. A. , vol.96 , pp. 8919-8924
    • Tang, M.1
  • 79
    • 0032447594 scopus 로고    scopus 로고
    • Efficient translesion replication in the absence of Escherichia coli Umu proteins and 3′-5′ exonuclease proofreading function
    • Vandewiele, D., A. Borden, P. I. O'Grady, R. Woodgate, and C. W. Lawrence 1998. Efficient translesion replication in the absence of Escherichia coli Umu proteins and 3′-5′ exonuclease proofreading function. Proc. Natl. Acad. Sci. U. S. A. 95:15519-15524.
    • (1998) Proc. Natl. Acad. Sci. U. S. A. , vol.95 , pp. 15519-15524
    • Vandewiele, D.1    Borden, A.2    O'Grady, P.I.3    Woodgate, R.4    Lawrence, C.W.5
  • 80
    • 0034574554 scopus 로고    scopus 로고
    • The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity
    • Wagner, J., S. Fujii, P. Gruz, T. Nohmi, and R. P. Fuchs 2000. The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity. EMBO Rep. 1:484-488.
    • (2000) EMBO Rep , vol.1 , pp. 484-488
    • Wagner, J.1    Fujii, S.2    Gruz, P.3    Nohmi, T.4    Fuchs, R.P.5
  • 81
    • 2542472534 scopus 로고
    • UmuC mutagenesis protein of Escherichia coli: purification and interaction with UmuD and UmuD′
    • Woodgate, R., M. Rajagopalan, C. Lu, and H. Echols 1989. UmuC mutagenesis protein of Escherichia coli: purification and interaction with UmuD and UmuD′. Proc. Natl. Acad. Sci. U. S. A. 86:7301-7305.
    • (1989) Proc. Natl. Acad. Sci. U. S. A. , vol.86 , pp. 7301-7305
    • Woodgate, R.1    Rajagopalan, M.2    Lu, C.3    Echols, H.4
  • 82
    • 0026640077 scopus 로고
    • Mutagenesis induced by bacterial UmuDC proteins and their plasmid homologues
    • Woodgate, R., and S. G. Sedgwick 1992. Mutagenesis induced by bacterial UmuDC proteins and their plasmid homologues. Mol. Microbiol. 6:2213- 2218.
    • (1992) Mol. Microbiol. , vol.6 , pp. 2213-2218
    • Woodgate, R.1    Sedgwick, S.G.2
  • 83
    • 0842303308 scopus 로고    scopus 로고
    • A role for DNA polymerase V in G → T mutations from the major benzo[a]pyrene N2-dG adduct when studied in a 5′-TGT sequence in E. coli
    • Yin, J., K. Y. Seo, and E. L. Loechler 2004. A role for DNA polymerase V in G → T mutations from the major benzo[a]pyrene N2-dG adduct when studied in a 5′-TGT sequence in E. coli. DNA Repair (Amst.) 3:323-334.
    • (2004) DNA Repair (Amst. ) , vol.3 , pp. 323-334
    • Yin, J.1    Seo, K.Y.2    Loechler, E.L.3


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