Innate and adaptive immune responses to viral infection and vaccination

Current Opinion in Virology

Volumn 1, Issue 4, 2011, Pages 226-232

  Aoshi, Taiki ^a,b   Koyama, Shohei ^c   Kobiyama, Kouji ^a,b   Akira, Shizuo ^b   Ishii, Ken J ^a,b  

^a NATIONAL INSTITUTE OF BIOMEDICAL INNOVATION   (Japan)

^b OSAKA UNIVERSITY   (Japan)

^c TOHOKU UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

C TYPE LECTIN RECEPTOR; RETINOIC ACID INDUCIBLE PROTEIN I; RIG 1 LIKE RECEPTOR; TOLL LIKE RECEPTOR; UNCLASSIFIED DRUG;

ADAPTIVE IMMUNITY; ANTIGEN RECOGNITION; ARTICLE; CYTOSOL; HUMAN; IMMUNE RESPONSE; INFLUENZA; INFLUENZA VIRUS; INNATE IMMUNITY; NONHUMAN; PRIORITY JOURNAL; VACCINATION; VIRUS DETECTION; VIRUS INFECTION;

EID: 80053353462     PISSN: 18796257     EISSN: 18796265     Source Type: Journal    
DOI: 10.1016/j.coviro.2011.07.002     Document Type: Review

References (65)

1. T. Kawai, and S. Akira The role of pattern-recognition receptors in innate immunity: update on Toll-like receptors Nat Immunol 11 2010 373 384
2. T.B.H. Geijtenbeek, and S.I. Gringhuis Signalling through C-type lectin receptors: shaping immune responses Nat Rev Immunol 9 2009 465 479
3. M. Yoneyama, and T. Fujita RNA recognition and signal transduction by RIG-I-like receptors Immunol Rev 227 2009 54 65
4. L. Franchi, N. Wamer, K. Viani, and G. Nunez Function of Nod-like receptors in microbial recognition and host defense Immunol Rev 227 2009 106 128
5. L. Unterholzner, S.E. Keating, M. Baran, K.A. Horan, S.B. Jensen, S. Sharma, C.M. Sirois, T.C. Jin, E. Latz, and T.S. Xiao IFI16 is an innate immune sensor for intracellular DNA Nat Immunol 11 2010 997 1004
6. G.Y. Chen, and G. Nunez Sterile inflammation: sensing and reacting to damage Nat Rev Immunol 10 2010 826 837
7. O. Takeuchi, and S. Akira Pattern recognition receptors and inflammation Cell 140 2010 805 820
8. N.W. Palm, and R. Medzhitov Pattern recognition receptors and control of adaptive immunity Immunol Rev 227 2009 221 233
9. S. Manicassamy, and B. Pulendran Modulation of adaptive immunity with Toll-like receptors Semin Immunol 21 2009 185 193
10. S. Koyama, C. Coban, T. Aoshi, T. Horii, S. Akira, and K.J. Ishii Innate immune control of nucleic acid-based vaccine immunogenicity Expert Rev Vaccines 8 2009 1099 1107
11. A. Williams, R.A. Flavell, and S.C. Eisenbarth The role of NOD-like receptors in shaping adaptive immunity Curr Opin Immunol 22 2010 34 40
12. O. Joffre, M.A. Nolte, R. Sporri, and C.R.E. Sousa Inflammatory signals in dendritic cell activation and the induction of adaptive immunity Immunol Rev 227 2009 234 247
13. R.E. Vance, R.R. Isberg, and D.A. Portnoy Patterns of pathogenesis: discrimination of pathogenic and nonpathogenic microbes by the innate immune system Cell Host Microbe 6 2009 10 21
14. G.A. Versteeg, and A. Garcia-Sastre Viral tricks to grid-lock the type I interferon system Curr Opin Microbiol 13 2010 508 516
15. R.W. Finberg, J.P. Wang, and E.A. Kurt-Jones Toll like receptors and viruses Rev Med Virol 17 2007 35 43 (Pubitemid 46114123)
16. M. Carty, and A.G. Bowie Recent insights into the role of Toll-like receptors in viral infection Clin Exp Immunol 161 2010 397 406
17. R. Barbalat, L. Lau, R.M. Locksley, and G.M. Barton Toll-like receptor 2 on inflammatory monocytes induces type I interferon in response to viral but not bacterial ligands Nat Immunol 10 2009 1200 1207
18. A.L. Blasius, and B. Beutler Intracellular Toll-like receptors Immunity 32 2010 305 315
19. M. Schlee, A. Roth, V. Hornung, C.A. Hagmann, V. Wimmenauer, W. Barchet, C. Coch, M. Janke, A. Mihailovic, and G. Wardle Recognition of 5′ triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus Immunity 31 2009 25 34
20. J. Rehwinkel, C.P. Tan, D. Goubau, O. Schulz, A. Pichlmair, K. Bier, N. Robb, F. Vreede, W. Barclay, and E. Fodor RIG-I detects viral genomic RNA during negative-strand RNA virus infection Cell 140 2010 397 408
21. A. Pichlmair, O. Schulz, C.P. Tan, J. Rehwinkel, H. Kato, O. Takeuchi, S. Akira, M. Way, G. Schiavo, and C.R.E. Sousa Activation of MDA5 requires higher-order RNA structures generated during virus infection J Virol 83 2009 10761 10769
22. A. Schmidt, S. Endres, and S. Rothenfusser Pattern recognition of viral nucleic acids by RIG-I-like helicases J Mol Med 89 2011 5 12
23. T. Satoh, H. Kato, Y. Kumagai, M. Yoneyama, S. Sato, K. Matsushita, T. Tsujimura, T. Fujita, S. Akira, and O. Takeuchi LGP2 is a positive regulator of RIG-I- and MDA5-mediated antiviral responses Proc Natl Acad Sci U S A 107 2010 1512 1517
24. H. Poeck, M. Bscheider, O. Gross, K. Finger, S. Roth, M. Rebsamen, N. Hannesschlager, M. Schlee, S. Rothenfusser, and W. Barchet Recognition of RNA virus by RIG-I results in activation of CARD9 and inflammasome signaling for interleukin 1 beta production Nat Immunol 11 2010 63 1824
25. T.D. Kanneganti Central roles of NLRs and inflammasomes in viral infection Nat Rev Immunol 10 2010 688 698
26. A. Sabbah, T.H. Chang, R. Harnack, V. Frohlich, K. Tominaga, P.H. Dube, Y. Xiang, and S. Bose Activation of innate immune antiviral responses by Nod2 Nat Immunol 10 2009 1073 1080
27. M.H. Shaw, N. Kamada, N. Warner, Y.G. Kim, and G. Nunez The ever-expanding function of NOD2: autophagy, viral recognition, and T cell activation Trends Immunol 32 2011 73 79
28. F. Martinon, A. Mayor, and J. Tschopp The inflammasomes: guardians of the body Ann Rev Immunol 27 2009 229 265
29. T. Burckstummer, C. Baumann, S. Bluml, E. Dixit, G. Durnberger, H. Jahn, M. Planyavsky, M. Bilban, J. Colinge, and K.L. Bennett An orthogonal proteomic-genomic screen identifies AIM2 as a cytoplasmic DNA sensor for the inflammasome Nat Immunol 10 2009 266 272
30. T. Fernandes-Alnemri, J.W. Yu, C. Juliana, L. Solorzano, S. Kang, J.H. Wu, P. Datta, M. McCormick, L. Huang, and E. McDermott The AIM2 inflammasome is critical for innate immunity to Francisella tularensis Nat Immunol 11 2010 385 394
31. V. Hornung, A. Ablasser, M. Charrel-Dennis, F. Bauernfeind, G. Horvath, D.R. Caffrey, E. Latz, and K.A. Fitzgerald AIM2 recognizes cytosolic dsDNA and forms a caspase-1-activating inflammasome with ASC Nature 458 2009 514 518
32. T.L. Roberts, A. Idris, J.A. Dunn, G.M. Kelly, C.M. Burnton, S. Hodgson, L.L. Hardy, V. Garceau, M.J. Sweet, and I.L. Ross HIN-200 proteins regulate caspase activation in response to foreign cytoplasmic DNA Science 323 2009 1057 1060
33. J.W. Jones, N. Kayagaki, P. Broz, T. Henry, K. Newton, K. O'Rourke, S. Chan, J. Dong, Y. Qu, and M. Roose-Girma Absent in melanoma 2 is required for innate immune recognition of Francisella tularensis Proc Natl Acad Sci U S A 107 2010 9771 9776
34. V.A.K. Rathinam, Z.Z. Jiang, S.N. Waggoner, S. Sharma, L.E. Cole, L. Waggoner, S.K. Vanaja, B.G. Monks, S. Ganesan, and E. Latz The AIM2 inflammasome is essential for host defense against cytosolic bacteria and DNA viruses Nat Immunol 11 2010 395 403
35. D. Goubau, J. Rehwinkel, and C.R.E. Sousa PYHIN proteins: center stage in DNA sensing Nat Immunol 11 2010 984 986
36. D. Choubey, X. Duan, E. Dickerson, L. Ponomareva, R. Panchanathan, H. Shen, and R. Srivastava Interferon-inducible p200-family proteins as novel sensors of cytoplasmic DNA: role in inflammation and autoimmunity J Interferon Cytokine Res 30 2010 371 380
37. M. Gariglio, M. Mondini, M. De Andrea, and S. Landolfo The multifaceted interferon-inducible p200 family proteins: from cell biology to human pathology J Interferon Cytokine Res 31 2011 159 172
38. A. Takaoka, Z. Wang, M.K. Choi, H. Yanai, H. Negishi, T. Ban, Y. Lu, M. Miyagishi, T. Kodama, and K. Honda DAI (DLM-1/ZBP1) is a cytosolic DNA sensor and an activator of innate immune response Nature 448 2007 501 505 (Pubitemid 47123520)
39. K.J. Ishii, T. Kawagoe, S. Koyama, K. Matsui, H. Kumar, T. Kawai, S. Uematsu, O. Takeuchi, F. Takeshita, and C. Coban TANK-binding kinase-1 delineates innate and adaptive immune responses to DNA vaccines Nature 451 2008 725 729 (Pubitemid 351220566)
40. P.Y. Yang, H.Z. An, X.G. Liu, M.Y. Wen, Y.Y. Zheng, Y.C. Rui, and X.T. Cao The cytosolic nucleic acid sensor LRRFIP1 mediates the production of type I interferon via a beta-catenin-dependent pathway Nat Immunol 11 2010 487 494
41. T. Kim, S. Pazhoor, M.S. Bao, Z.Q. Zhang, S. Hanabuchi, V. Facchinetti, L. Bover, J. Plumas, L. Chaperot, and J. Qin Aspartate-glutamate-alanine- histidine box motif (DEAH)/RNA helicase A helicases sense microbial DNA in human plasmacytoid dendritic cells Proc Natl Acad Sci U S A 107 2010 15181 15186
42. A. Ablasser, F. Bauernfeind, G. Hartmann, E. Latz, K.A. Fitzgerald, and V. Hornung RIG-I-dependent sensing of poly(dA:dT) through the induction of an RNA polymerase III-transcribed RNA intermediate Nat Immunol 10 2009 1065 1072
43. Y.H. Chiu, J.B. MacMillan, and Z.J.J. Chen RNA polymerase III detects cytosolic DNA and induces type I interferons through the RIG-I pathway Cell 138 2009 576 591
44. K. Kobiyama, F. Takeshita, N. Jounai, A. Sakaue-Sawano, A. Miyawaki, K.J. Ishii, T. Kawai, S. Sasaki, H. Hirano, and N. Ishii Extrachromosomal histone H2B mediates innate antiviral immune responses induced by intracellular double-stranded DNA J Virol 84 2010 822 832
45. K.J. Ishii, and S. Akira Toll or toll-free adjuvant path toward the optimal vaccine development J Clin Immunol 27 2007 363 371 (Pubitemid 46906656)
46. T. Querec, S. Bennouna, S.K. Alkan, Y. Laouar, K. Gorden, R. Flavell, S. Akira, R. Ahmed, and B. Pulendran Yellow fever vaccine YF-17D activates multiple dendritic cell subsets via TLR2, 7, 8, and 9 to stimulate polyvalent immunity J Exp Med 203 2006 413 424 (Pubitemid 43290850)
47. T.D. Querec, R.S. Akondy, E.K. Lee, W.P. Cao, H.I. Nakaya, D. Teuwen, A. Pirani, K. Gernert, J.S. Deng, and B. Marzolf Systems biology approach predicts immunogenicity of the yellow fever vaccine in humans Nat Immunol 10 2009 116 125
48. S. Koyama, T. Aoshi, T. Tanimoto, Y. Kumagai, K. Kobiyama, T. Tougan, K. Sakurai, C. Coban, T. Horii, and S. Akira Plasmacytoid dendritic cells delineate immunogenicity of influenza vaccine subtypes Sci Transl Med 2 2010 24 25
49. T. Ichinohe Respective roles of TLR, RIG-I and NLRP3 in influenza virus infection and immunity: impact on vaccine design Expert Rev Vaccines 9 2010 1315 1324
50. C.B. Lopez, B. Moltedo, L. Alexopoulou, L. Bonifaz, R.A. Flavell, and T.M. Moran TLR-independent induction of dendritic cell maturation and adaptive immunity by negative-strand RNA viruses J Immunol 173 2004 6882 6889 (Pubitemid 39541075)
51. A.K. Heer, A. Shamshiev, A. Donda, S. Uematsu, S. Akira, M. Kopf, and B.J. Marsland TLR signaling fine-tunes anti-influenza B cell responses without regulating effector T cell responses J Immunol 178 2007 2182 2191 (Pubitemid 46233416)
52. S. Koyama, K.J. Ishii, H. Kumar, T. Tanimoto, C. Coban, S. Uematsu, T. Kawai, and S. Akira Differential role of TLR- and RLR-signaling in the immune responses to influenza a virus infection and vaccination J Immunol 179 2007 4711 4720
53. S.U. Seo, H.J. Kwon, J.H. Song, Y.H. Byun, B.L. Seong, T. Kawai, S. Akira, and M.N. Kweon MyD88 Signaling Is Indispensable for Primary Influenza A Virus Infection but Dispensable for Secondary Infection Journal of Virology 84 2010 12713 12722
54. F. Geeraedts, N. Goutagny, V. Hornung, M. Severa, A. de Haan, J. Pool, J. Wilschut, K.A. Fitzgerald, and A. Huckriede Superior immunogenicity of inactivated whole virus H5N1 influenza vaccine is primarily controlled by Toll-like receptor signalling PLoS Pathogens 4 2008 e1000138
55. A. Jung, H. Kato, Y. Kumagai, H. Kumar, T. Kawai, O. Takeuchi, and S. Akira Lymphocytoid choriomeningitis virus activates plasmacytoid dendritic cells and induces a cytotoxic T-cell response via MyD88 J Virol 82 2008 196 206 (Pubitemid 350309136)
56. T.D. Kanneganti, M. Body-Malapel, A. Amer, J.H. Park, J. Whitfield, L. Franchi, Z.F. Taraporewala, D. Miller, J.T. Patton, and N. Inohara Critical role for Cryopyrin/Nalp3 in activation of caspase-1 in response to viral infection and double-stranded RNA J Biol Chem 281 2006 36560 36568 (Pubitemid 46042123)
57. T. Ichinohe, I.K. Pang, and A. Iwasaki Influenza virus activates inflammasomes via its intracellular M2 ion channel Nat Immunol 11 2010 404 410
58. T. Ichinohe, H.K. Lee, Y. Ogura, R. Flavell, and A. Iwasaki Inflammasome recognition of influenza virus is essential for adaptive immune responses J Exp Med 206 2009 79 87
59. I.C. Allen, M.A. Scull, C.B. Moore, E.K. Holl, E. McElvania-TeKippe, D.J. Taxman, E.H. Guthrie, R.J. Pickles, and J.P.Y. Ting The NLRP3 inflammasome mediates in vivo innate immunity to influenza A virus through recognition of viral RNA Immunity 30 2009 556 565
60. P.G. Thomas, P. Dash, J.R. Aldridge, A.H. Ellebedy, C. Reynolds, A.J. Funk, W.J. Martin, M. Lamkanfi, R.J. Webby, and K.L. Boyd The intracellular sensor NLRP3 mediates key innate and healing responses to influenza A virus via the regulation of caspase-1 Immunity 30 2009 566 575
61. I.K. Pang, and A. Iwasaki Inflammasomes as mediators of immunity against influenza virus Trends Immunol 32 2011 34 41
62. B. Heynisch, T. Frensing, K. Heinze, C. Seitz, Y. Genzel, and U. Reichl Differential activation of host cell signalling pathways through infection with two variants of influenza A/Puerto Rico/8/34 (H1N1) in MDCK cells Vaccine 28 2010 8210 8218
63. M. Schmolke, and A. Garcia-Sastre Evasion of innate and adaptive immune responses by influenza A virus Cell Microbiol 12 2010 873 880
64. S.M. Gregory, B.K. Davis, J.A. West, D.J. Taxman, S. Matsuzawa, J.C. Reed, J.P.Y. Ting, and B. Damania Discovery of a viral NLR homolog that inhibits the inflammasome Science 331 2011 330 334
65. S.P. Kasturi, I. Skountzou, R.A. Albrecht, D. Koutsonanos, T. Hua, H.I. Nakaya, R. Ravindran, S. Stewart, M. Alam, and M. Kwissa Programming the magnitude and persistence of antibody responses with innate immunity Nature 470 2011 543 547