메뉴 건너뛰기




Volumn 44, Issue 9, 2011, Pages 709-717

Bioorthogonal Labeling of 5-Hydroxymethylcytosine in Genomic DNA and Diazirine-Based DNA Photo-Cross-Linking Probes

Author keywords

[No Author keywords available]

Indexed keywords

5 HYDROXYMETHYLCYTOSINE; 5 METHYLCYTOSINE; 5-HYDROXYMETHYLCYTOSINE; AZIDE; BIOTIN; CROSS LINKING REAGENT; CYTOSINE; DIAZOMETHANE; DNA; DRUG DERIVATIVE; GLUCOSYLTRANSFERASE; STREPTAVIDIN;

EID: 80053048343     PISSN: 00014842     EISSN: 15204898     Source Type: Journal    
DOI: 10.1021/ar2000502     Document Type: Article
Times cited : (44)

References (75)
  • 2
    • 57349121991 scopus 로고    scopus 로고
    • Exploring RNA transcription and turnover in vivo by using click chemistry
    • Jao, C. Y.; Salic, A. Exploring RNA transcription and turnover in vivo by using click chemistry Proc. Natl. Acad. Sci. U.S.A. 2008, 105, 15779-15784
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , pp. 15779-15784
    • Jao, C.Y.1    Salic, A.2
  • 4
    • 55549117509 scopus 로고    scopus 로고
    • A diazirine-based nucleoside analogue for efficient DNA interstrand photocross-linking
    • Qiu, Z.; Lu, L.; Jian, X.; He, C. A diazirine-based nucleoside analogue for efficient DNA interstrand photocross-linking J. Am. Chem. Soc. 2008, 130, 14398-14399
    • (2008) J. Am. Chem. Soc. , vol.130 , pp. 14398-14399
    • Qiu, Z.1    Lu, L.2    Jian, X.3    He, C.4
  • 5
    • 37549057349 scopus 로고    scopus 로고
    • Diazirine-based DNA photo-cross-linking probes for the study of protein-DNA interactions
    • Shigdel, U. K.; Zhang, J.; He, C. Diazirine-based DNA photo-cross-linking probes for the study of protein-DNA interactions Angew. Chem., Int. Ed. 2008, 47, 90-93
    • (2008) Angew. Chem., Int. Ed. , vol.47 , pp. 90-93
    • Shigdel, U.K.1    Zhang, J.2    He, C.3
  • 6
    • 39649122136 scopus 로고    scopus 로고
    • Cancer epigenetics: Modifications, screening, and therapy
    • DOI 10.1146/annurev.med.59.061606.095816
    • Gal-Yam, E. N.; Saito, Y.; Egger, G.; Jones, P. A. Cancer epigenetics: modifications, screening, and therapy Annu. Rev. Med. 2008, 59, 267-280 (Pubitemid 351287937)
    • (2008) Annual Review of Medicine , vol.59 , pp. 267-280
    • Gal-Yam, E.N.1    Saito, Y.2    Egger, G.3    Jones, P.A.4
  • 7
    • 34249279527 scopus 로고    scopus 로고
    • Stability and flexibility of epigenetic gene regulation in mammalian development
    • DOI 10.1038/nature05918, PII NATURE05918
    • Reik, W. Stability and flexibility of epigenetic gene regulation in mammalian development Nature 2007, 447, 425-432 (Pubitemid 46816749)
    • (2007) Nature , vol.447 , Issue.7143 , pp. 425-432
    • Reik, W.1
  • 8
    • 15744401773 scopus 로고    scopus 로고
    • Eukaryotic cytosine methyltransferases
    • DOI 10.1146/annurev.biochem.74.010904.153721
    • Goll, M. G.; Bestor, T. H. Eukaryotic cytosine methyltransferases Annu. Rev. Biochem. 2005, 74, 481-514 (Pubitemid 40995515)
    • (2005) Annual Review of Biochemistry , vol.74 , pp. 481-514
    • Goll, M.G.1    Bestor, T.H.2
  • 9
    • 34250188803 scopus 로고    scopus 로고
    • Genomic patterns of DNA methylation: Targets and function of an epigenetic mark
    • DOI 10.1016/j.ceb.2007.04.011, PII S0955067407000634, Nucleus and Gene Expression
    • Weber, M.; Schubeler, D. Genomic patterns of DNA methylation: targets and function of an epigenetic mark Curr. Opin. Cell Biol. 2007, 19, 273-280 (Pubitemid 46899512)
    • (2007) Current Opinion in Cell Biology , vol.19 , Issue.3 , pp. 273-280
    • Weber, M.1    Schubeler, D.2
  • 10
    • 32344450824 scopus 로고    scopus 로고
    • Genomic DNA methylation: The mark and its mediators
    • DOI 10.1016/j.tibs.2005.12.008, PII S096800040500352X
    • Klose, R. J.; Bird, A. P. Genomic DNA methylation: the mark and its mediators Trends Biochem. Sci. 2006, 31, 89-97 (Pubitemid 43221841)
    • (2006) Trends in Biochemical Sciences , vol.31 , Issue.2 , pp. 89-97
    • Klose, R.J.1    Bird, A.P.2
  • 11
    • 66149123748 scopus 로고    scopus 로고
    • The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain
    • Kriaucionis, S.; Heintz, N. The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain Science 2009, 324, 929-930
    • (2009) Science , vol.324 , pp. 929-930
    • Kriaucionis, S.1    Heintz, N.2
  • 13
    • 74049151209 scopus 로고    scopus 로고
    • A non-heme iron-mediated chemical demethylation in DNA and RNA
    • Yi, C.; Yang, C. G.; He, C. A non-heme iron-mediated chemical demethylation in DNA and RNA Acc. Chem. Res. 2009, 42, 519-529
    • (2009) Acc. Chem. Res. , vol.42 , pp. 519-529
    • Yi, C.1    Yang, C.G.2    He, C.3
  • 14
    • 2442628211 scopus 로고    scopus 로고
    • FeII/alpha-ketoglutarate-dependent hydroxylases and related enzymes
    • Hausinger, R. P. FeII/alpha-ketoglutarate-dependent hydroxylases and related enzymes Crit. Rev. Biochem. Mol. Biol. 2004, 39, 21-68
    • (2004) Crit. Rev. Biochem. Mol. Biol. , vol.39 , pp. 21-68
    • Hausinger, R.P.1
  • 15
    • 77956189495 scopus 로고    scopus 로고
    • Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification
    • Ito, S.; D'Alessio, A. C.; Taranova, O. V.; Hong, K.; Sowers, L. C.; Zhang, Y. Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification Nature 2010, 466, 1129-1133
    • (2010) Nature , vol.466 , pp. 1129-1133
    • Ito, S.1    D'Alessio, A.C.2    Taranova, O.V.3    Hong, K.4    Sowers, L.C.5    Zhang, Y.6
  • 18
    • 67649510355 scopus 로고    scopus 로고
    • Oxygenase Catalyzed 5-Methylcytosine Hydroxylation
    • Loenarz, C.; Schofield, C. J. Oxygenase Catalyzed 5-Methylcytosine Hydroxylation Chem. Biol. 2009, 16, 580-583
    • (2009) Chem. Biol. , vol.16 , pp. 580-583
    • Loenarz, C.1    Schofield, C.J.2
  • 19
    • 0018796242 scopus 로고
    • Reaction of bisulfite with the 5-hydroxymethyl group in pyrimidines and in phage DNAs
    • Hayatsu, H.; Shiragami, M. Reaction of bisulfite with the 5-hydroxymethyl group in pyrimidines and in phage DNAs Biochemistry 1979, 18, 632-637
    • (1979) Biochemistry , vol.18 , pp. 632-637
    • Hayatsu, H.1    Shiragami, M.2
  • 20
    • 77954061853 scopus 로고    scopus 로고
    • Enzymatic approaches and bisulfite sequencing cannot distinguish between 5-methylcytosine and 5-hydroxymethylcytosine in DNA
    • Nestor, C.; Ruzov, A.; Meehan, R. R.; Dunican, D. S. Enzymatic approaches and bisulfite sequencing cannot distinguish between 5-methylcytosine and 5-hydroxymethylcytosine in DNA BioTechniques 2010, 48, 317-319
    • (2010) BioTechniques , vol.48 , pp. 317-319
    • Nestor, C.1    Ruzov, A.2    Meehan, R.R.3    Dunican, D.S.4
  • 21
    • 77749277177 scopus 로고    scopus 로고
    • The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing
    • Huang, Y.; Pastor, W. A.; Shen, Y.; Tahiliani, M.; Liu, D. R.; Rao, A. The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing PLoS One 2010, 5, e8888
    • (2010) PLoS One , vol.5 , pp. 8888
    • Huang, Y.1    Pastor, W.A.2    Shen, Y.3    Tahiliani, M.4    Liu, D.R.5    Rao, A.6
  • 22
    • 77954362183 scopus 로고    scopus 로고
    • Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine
    • Jin, S. G.; Kadam, S.; Pfeifer, G. P. Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine Nucleic Acids Res. 2010, 38, e125
    • (2010) Nucleic Acids Res. , vol.38 , pp. 125
    • Jin, S.G.1    Kadam, S.2    Pfeifer, G.P.3
  • 24
    • 0036514084 scopus 로고    scopus 로고
    • Photoaffinity labeling in drug discovery and developments: Chemical gateway for entering proteomic frontier
    • Hatanaka, Y.; Sadakane, Y. Photoaffinity labeling in drug discovery and developments: chemical gateway for entering proteomic frontier Curr. Top. Med. Chem. 2002, 2, 271-288
    • (2002) Curr. Top. Med. Chem. , vol.2 , pp. 271-288
    • Hatanaka, Y.1    Sadakane, Y.2
  • 27
    • 14744299050 scopus 로고    scopus 로고
    • Photoaffinity labeling technique for studying DNA replication and DNA repair
    • Khodyreva, S. N.; Lavrik, O. I. Photoaffinity labeling technique for studying DNA replication and DNA repair Curr. Med. Chem. 2005, 12, 641-655 (Pubitemid 40331057)
    • (2005) Current Medicinal Chemistry , vol.12 , Issue.6 , pp. 641-655
    • Khodyreva, S.N.1    Lavrik, O.I.2
  • 28
    • 0027203297 scopus 로고
    • New photolabeling and crosslinking methods
    • Brunner, J. New photolabeling and crosslinking methods Annu. Rev. Biochem. 1993, 62, 483-514 (Pubitemid 23237879)
    • (1993) Annual Review of Biochemistry , vol.62 , pp. 483-514
    • Brunner, J.1
  • 29
    • 4444337335 scopus 로고    scopus 로고
    • Dual functions, clamp opening and primer-template recognition, define a key clamp loader subunit
    • DOI 10.1016/j.jmb.2004.07.097, PII S0022283604009519
    • Magdalena Coman, M.; Jin, M.; Ceapa, R.; Finkelstein, J.; O'Donnell, M.; Chait, B. T.; Hingorani, M. M. Dual functions, clamp opening and primer-template recognition, define a key clamp loader subunit J. Mol. Biol. 2004, 342, 1457-1469 (Pubitemid 39208672)
    • (2004) Journal of Molecular Biology , vol.342 , Issue.5 , pp. 1457-1469
    • Magdalena Coman, M.1    Jin, M.2    Ceapa, R.3    Finkelstein, J.4    O'Donnell, M.5    Chait, B.T.6    Hingorani, M.M.7
  • 30
    • 2542553347 scopus 로고    scopus 로고
    • Identification of nuclear proteins that interact with platinum-modified DNA by photoaffinity labeling
    • DOI 10.1021/ja049533o
    • Zhang, C. X.; Chang, P. V.; Lippard, S. J. Identification of Nuclear Proteins that Interact with Platinum-Modified DNA by Photoaffinity Labeling J. Am. Chem. Soc. 2004, 126, 6536-6537 (Pubitemid 38697338)
    • (2004) Journal of the American Chemical Society , vol.126 , Issue.21 , pp. 6536-6537
    • Zhang, C.X.1    Chang, P.V.2    Lippard, S.J.3
  • 32
    • 0028107408 scopus 로고
    • Acceptor helix interactions in a class II tRNA synthetase: Photoaffinity cross-linking of an RNA miniduplex substrate
    • Musier-Forsyth, K.; Schimmel, P. Acceptor helix interactions in a class II tRNA synthetase: photoaffinity cross-linking of an RNA miniduplex substrate Biochemistry 1994, 33, 773-779 (Pubitemid 24064116)
    • (1994) Biochemistry , vol.33 , Issue.3 , pp. 773-779
    • Musier-Forsyth, K.1    Schimmel, P.2
  • 33
    • 0033538004 scopus 로고    scopus 로고
    • Photocross-linking of the homing endonuclease PI-SceI to its recognition sequence
    • Pingoud, V.; Thole, H.; Christ, F.; Grindl, W.; Wende, W.; Pingoud, A. Photocross-linking of the homing endonuclease PI-SceI to its recognition sequence J. Biol. Chem. 1999, 274, 10235-10243
    • (1999) J. Biol. Chem. , vol.274 , pp. 10235-10243
    • Pingoud, V.1    Thole, H.2    Christ, F.3    Grindl, W.4    Wende, W.5    Pingoud, A.6
  • 34
    • 33645507015 scopus 로고    scopus 로고
    • Cross-linking chemistry and biology: Development of multifunctional photoaffinity probes
    • DOI 10.1002/tcr.20058
    • Tomohiro, T.; Hashimoto, M.; Hatanaka, Y. Cross-linking chemistry and biology: development of multifunctional photoaffinity probes Chem. Rec. 2005, 5, 385-395 (Pubitemid 43499199)
    • (2005) Chemical Record , vol.5 , Issue.6 , pp. 385-395
    • Tomohiro, T.1    Hashimoto, M.2    Hatanaka, Y.3
  • 35
    • 0029814310 scopus 로고    scopus 로고
    • A photolabile 2',3'-dideoxyuridylate analog bearing an aryl(trifluoromethyl)diazirine moiety: Photoaffinity labeling of HIV-1 reverse transcriptase
    • Yamaguchi, T.; Saneyoshi, M. A photolabile 2′,3′- dideoxyuridylate analog bearing an aryl(trifluoromethyl)diazirine moiety: photoaffinity labeling of HIV-1 reverse transcriptase Nucleic Acids Res. 1996, 24, 3364-3369 (Pubitemid 26294448)
    • (1996) Nucleic Acids Research , vol.24 , Issue.17 , pp. 3364-3369
    • Yamaguchi, T.1    Saneyoshi, M.2
  • 36
    • 0030831236 scopus 로고    scopus 로고
    • Synthesis and evaluation of oligodeoxyribonucleotides containing an aryl(trifluoromethyl)diazirine moiety as the cross-linking probe: Photoaffinity labeling of mammalian DNA polymerase β
    • DOI 10.1093/nar/25.12.2352
    • Yamaguchi, T.; Suyama, K.; Narita, K.; Kohgo, S.; Tomikawa, A.; Saneyoshi, M. Synthesis and evaluation of oligodeoxyribonucleotides containing an aryl(trifluoromethyl)diazirine moiety as the cross-linking probe: photoaffinity labeling of mammalian DNA polymerase beta Nucleic Acids Res. 1997, 25, 2352-2358 (Pubitemid 27303693)
    • (1997) Nucleic Acids Research , vol.25 , Issue.12 , pp. 2352-2358
    • Yamaguchi, T.1    Suyama, K.2    Narita, K.3    Kohgo, S.4    Tomikawa, A.5    Saneyoshi, M.6
  • 37
    • 0030923759 scopus 로고    scopus 로고
    • The path of mRNA through the bacterial ribosome: A site-directed crosslinking study using new photoreactive derivatives of guanosine and uridine
    • Sergiev, P. V.; Lavrik, I. N.; Wlasoff, V. A.; Dokudovskaya, S. S.; Dontsova, O. A.; Bogdanov, A. A.; Brimacombe, R. The path of mRNA through the bacterial ribosome: a site-directed crosslinking study using new photoreactive derivatives of guanosine and uridine RNA 1997, 3, 464-475 (Pubitemid 27203909)
    • (1997) RNA , vol.3 , Issue.5 , pp. 464-475
    • Sergiev, P.V.1    Lavrik, I.N.2    Wlasoff, V.A.3    Dokudovskaya, S.S.4    Dontsova, O.A.5    Bogdanov, A.A.6    Brimacombe, R.7
  • 38
    • 0031801047 scopus 로고    scopus 로고
    • Synthesis of a new photo-cross-linking nucleoside analogue containing an aryl(trifluoromethyl)diazirine group: Application for EcoRII and MvaI restriction-modification enzymes
    • Topin, A. N.; Gritsenko, O. M.; Brevnov, M. G.; Gromova, E. S.; Korshunova, G. A. Synthesis of a new Photo-Cross-Linking Nucleoside Analogue Containing an Aryl(Trifluoromethyl)Diazirine Group: Application for Eco RII and Mva I Restriction-Modification Enzymes Nucleosides Nucleotides 1998, 17, 1163-1175 (Pubitemid 28274742)
    • (1998) Nucleosides and Nucleotides , vol.17 , Issue.7 , pp. 1163-1175
    • Topin, A.N.1    Gritsenko, O.M.2    Brevnov, M.G.3    Gromova, E.S.4    Korshunova, G.A.5
  • 39
    • 0032520692 scopus 로고    scopus 로고
    • Survey of four different photoreactive moieties for DNA photoaffinity labeling of yeast RNA polymerase III transcription complexes
    • DOI 10.1093/nar/26.6.1421
    • Tate, J. J.; Persinger, J.; Bartholomew, B. Survey of four different photoreactive moieties for DNA photoaffinity labeling of yeast RNA polymerase III transcription complexes Nucleic Acids Res. 1998, 26, 1421-1426 (Pubitemid 28291616)
    • (1998) Nucleic Acids Research , vol.26 , Issue.6 , pp. 1421-1426
    • Tate, J.J.1    Persinger, J.2    Bartholomew, B.3
  • 40
    • 0033002085 scopus 로고    scopus 로고
    • Spatial organization of the core region of yeast TFIIIB-DNA complexes
    • Persinger, J.; Sengupta, S. M.; Bartholomew, B. Spatial organization of the core region of yeast TFIIIB-DNA complexes Mol. Cell. Biol. 1999, 19, 5218-5234 (Pubitemid 29289559)
    • (1999) Molecular and Cellular Biology , vol.19 , Issue.7 , pp. 5218-5234
    • Persinger, J.1    Sengupta, S.M.2    Bartholomew, B.3
  • 41
    • 0034327374 scopus 로고    scopus 로고
    • Two novel dATP analogs for DNA photoaffinity labeling
    • Zofall, M.; Bartholomew, B. Two novel dATP analogs for DNA photoaffinity labeling Nucleic Acids Res. 2000, 28, 4382-4390
    • (2000) Nucleic Acids Res. , vol.28 , pp. 4382-4390
    • Zofall, M.1    Bartholomew, B.2
  • 42
    • 0042319308 scopus 로고    scopus 로고
    • Photoaffinity labeling on magnetic microspheres (PALMm) methodology for topographic mapping: Preparation of PALMm reagents and demonstration of biochemical relevance
    • Halbfinger, E.; Gorochesky, K.; Levesque, S. A.; Beaudoin, A. R.; Sheihet, L.; Margel, S.; Fischer, B. Photoaffinity labeling on magnetic microspheres (PALMm) methodology for topographic mapping: preparation of PALMm reagents and demonstration of biochemical relevance Org. Biomol. Chem. 2003, 1, 2821-2832
    • (2003) Org. Biomol. Chem. , vol.1 , pp. 2821-2832
    • Halbfinger, E.1    Gorochesky, K.2    Levesque, S.A.3    Beaudoin, A.R.4    Sheihet, L.5    Margel, S.6    Fischer, B.7
  • 43
    • 0032102925 scopus 로고    scopus 로고
    • The environment of 5S rRNA in the ribosome: Cross-links to the GTPase-associated area of 23S rRNA
    • DOI 10.1093/nar/26.11.2519
    • Sergiev, P.; Dokudovskaya, S.; Romanova, E.; Topin, A.; Bogdanov, A.; Brimacombe, R.; Dontsova, O. The environment of 5S rRNA in the ribosome: cross-links to the GTPase-associated area of 23S rRNA Nucleic Acids Res. 1998, 26, 2519-2525 (Pubitemid 28297360)
    • (1998) Nucleic Acids Research , vol.26 , Issue.11 , pp. 2519-2525
    • Sergiev, P.1    Dokudovskaya, S.2    Romanova, E.3    Topin, A.4    Bogdanov, A.5    Brimacombe, R.6    Dontsova, O.7
  • 44
    • 33845457210 scopus 로고    scopus 로고
    • A new photoactive building block for investigation of DNA backbone interactions: Photoaffinity labeling of human DNA polymerase β
    • DOI 10.1002/cbic.200600333
    • Liebmann, M.; Di Pasquale, F.; Marx, A. A new photoactive building block for investigation of DNA backbone interactions: photoaffinity labeling of human DNA polymerase beta ChemBioChem 2006, 7, 1965-1969 (Pubitemid 44893533)
    • (2006) ChemBioChem , vol.7 , Issue.12 , pp. 1965-1969
    • Liebmann, M.1    Di Pasquale, F.2    Marx, A.3
  • 45
    • 18744389180 scopus 로고    scopus 로고
    • Photo-leucine and photo-methionine allow identification of protein-protein interactions in living cells
    • DOI 10.1038/nmeth752
    • Suchanek, M.; Radzikowska, A.; Thiele, C. Photo-leucine and photo-methionine allow identification of protein-protein interactions in living cells Nat. Methods 2005, 2, 261-267 (Pubitemid 41131007)
    • (2005) Nature Methods , vol.2 , Issue.4 , pp. 261-267
    • Suchanek, M.1    Radzikowska, A.2    Thiele, C.3
  • 46
    • 0001129080 scopus 로고
    • The bases of the nucleic acids of some bacterial and animal viruses: The occurrence of 5-hydroxymethylcytosine
    • Wyatt, G. R.; Cohen, S. S. The bases of the nucleic acids of some bacterial and animal viruses: the occurrence of 5-hydroxymethylcytosine Biochem. J. 1953, 55, 774-782
    • (1953) Biochem. J. , vol.55 , pp. 774-782
    • Wyatt, G.R.1    Cohen, S.S.2
  • 47
    • 0001445044 scopus 로고
    • Differences in the Chemical Composition of the Phage Nucleic Acids
    • Jesaitis, M. A. Differences in the Chemical Composition of the Phage Nucleic Acids Nature 1956, 178, 637-637
    • (1956) Nature , vol.178 , pp. 637-637
    • Jesaitis, M.A.1
  • 48
    • 0001587321 scopus 로고
    • Glucosylation of Deoxyribonucleic Acid 0.3. Alpha and Beta-Glucosyl Transferases from T4-Infected Escherichia Coli
    • Josse, J.; Kornberg, A. Glucosylation of Deoxyribonucleic Acid 0.3. Alpha and Beta-Glucosyl Transferases from T4-Infected Escherichia Coli J. Biol. Chem. 1962, 237, 1968-1976
    • (1962) J. Biol. Chem. , vol.237 , pp. 1968-1976
    • Josse, J.1    Kornberg, A.2
  • 49
    • 4544328906 scopus 로고    scopus 로고
    • Structural evidence of a passive base-flipping mechanism for β-glucosyltransferase
    • DOI 10.1074/jbc.M404394200
    • Lariviere, L.; Morera, S. Structural evidence of a passive base-flipping mechanism for beta-glucosyltransferase J. Biol. Chem. 2004, 279, 34715-34720 (Pubitemid 39318102)
    • (2004) Journal of Biological Chemistry , vol.279 , Issue.33 , pp. 34715-34720
    • Lariviere, L.1    Morera, S.2
  • 50
    • 0037099395 scopus 로고    scopus 로고
    • A stepwise huisgen cycloaddition process: Copper(I)-catalyzed regioselective "ligation" of azides and terminal alkynes
    • DOI 10.1002/1521-3773(20020715)41:14<2596::AID-ANIE2596>3.0.CO;2-4
    • Rostovtsev, V. V.; Green, L. G.; Fokin, V. V.; Sharpless, K. B. A stepwise Huisgen cycloaddition process: Copper(I)-catalyzed regioselective "ligation" of azides and terminal alkynes Angew. Chem., Int. Ed. 2002, 41, 2596-2599 (Pubitemid 34803480)
    • (2002) Angewandte Chemie - International Edition , vol.41 , Issue.14 , pp. 2596-2599
    • Rostovtsev, V.V.1    Green, L.G.2    Fokin, V.V.3    Sharpless, K.B.4
  • 51
    • 1942522084 scopus 로고    scopus 로고
    • Profiling enzyme activities in vivo using click chemistry methods
    • DOI 10.1016/j.chembiol.2004.03.012, PII S1074552104000961
    • Speers, A. E.; Cravatt, B. F. Profiling enzyme activities in vivo using click chemistry methods Chem. Biol. 2004, 11, 535-546 (Pubitemid 38511759)
    • (2004) Chemistry and Biology , vol.11 , Issue.4 , pp. 535-546
    • Speers, A.E.1    Cravatt, B.F.2
  • 52
    • 67650474557 scopus 로고    scopus 로고
    • Click chemistry and bioorthogonal reactions: Unprecedented selectivity in the labeling of biological molecules
    • Best, M. D. Click chemistry and bioorthogonal reactions: unprecedented selectivity in the labeling of biological molecules Biochemistry 2009, 48, 6571-6584
    • (2009) Biochemistry , vol.48 , pp. 6571-6584
    • Best, M.D.1
  • 53
    • 70349917806 scopus 로고    scopus 로고
    • Bioorthogonal Chemistry: Fishing for Selectivity in a Sea of Functionality
    • Sletten, E. M.; Bertozzi, C. R. Bioorthogonal Chemistry: Fishing for Selectivity in a Sea of Functionality Angew. Chem., Int. Ed. 2009, 48, 6974-6998
    • (2009) Angew. Chem., Int. Ed. , vol.48 , pp. 6974-6998
    • Sletten, E.M.1    Bertozzi, C.R.2
  • 54
    • 77949786732 scopus 로고    scopus 로고
    • In situ click chemistry: Probing the binding landscapes of biological molecules
    • Mamidyala, S. K.; Finn, M. G. In situ click chemistry: probing the binding landscapes of biological molecules Chem. Soc. Rev. 2010, 39, 1252-1261
    • (2010) Chem. Soc. Rev. , vol.39 , pp. 1252-1261
    • Mamidyala, S.K.1    Finn, M.G.2
  • 55
    • 0030842443 scopus 로고    scopus 로고
    • Solid phase synthesis and restriction endonuclease cleavage of oligodeoxynucleotides containing 5-(hydroxymethyl)-cytosine
    • Tardy-Planechaud, S.; Fujimoto, J.; Lin, S. S.; Sowers, L. C. Solid phase synthesis and restriction endonuclease cleavage of oligodeoxynucleotides containing 5-(hydroxymethyl)-cytosine Nucleic Acids Res. 1997, 25, 553-559
    • (1997) Nucleic Acids Res. , vol.25 , pp. 553-559
    • Tardy-Planechaud, S.1    Fujimoto, J.2    Lin, S.S.3    Sowers, L.C.4
  • 56
    • 79956094894 scopus 로고    scopus 로고
    • Syntheses of Two 5-Hydroxymethyl-2′-deoxycytidine Phosphoramidites with TBDMS as the 5-Hydroxymethyl Protecting Group and Their Incorporation into DNA
    • published online April 4.
    • Dai, Q.; Song, C.-X.; Pan, T.; He, C. Syntheses of Two 5-Hydroxymethyl-2′-deoxycytidine Phosphoramidites with TBDMS as the 5-Hydroxymethyl Protecting Group and Their Incorporation into DNA. J. Org. Chem. 2011, published online April 4, http://dx.doi.org/10.1021/jo200566d.
    • (2011) J. Org. Chem.
    • Dai, Q.1    Song, C.-X.2    Pan, T.3    He, C.4
  • 58
    • 41049098451 scopus 로고    scopus 로고
    • Visualizing metabolically labeled glycoconjugates of living cells by copper-free and fast huisgen cycloadditions
    • Ning, X.; Guo, J.; Wolfert, M. A.; Boons, G. J. Visualizing metabolically labeled glycoconjugates of living cells by copper-free and fast huisgen cycloadditions Angew. Chem., Int. Ed. 2008, 47, 2253-2255
    • (2008) Angew. Chem., Int. Ed. , vol.47 , pp. 2253-2255
    • Ning, X.1    Guo, J.2    Wolfert, M.A.3    Boons, G.J.4
  • 59
    • 77949863611 scopus 로고    scopus 로고
    • Cu-free click cycloaddition reactions in chemical biology
    • Jewett, J. C.; Bertozzi, C. R. Cu-free click cycloaddition reactions in chemical biology Chem. Soc. Rev. 2010, 39, 1272-1279
    • (2010) Chem. Soc. Rev. , vol.39 , pp. 1272-1279
    • Jewett, J.C.1    Bertozzi, C.R.2
  • 64
    • 0038018858 scopus 로고    scopus 로고
    • Covalent trapping of protein-DNA complexes
    • DOI 10.1146/annurev.biochem.72.121801.161447
    • Verdine, G. L.; Norman, D. P. Covalent trapping of protein-DNA complexes Annu. Rev. Biochem. 2003, 72, 337-366 (Pubitemid 36930449)
    • (2003) Annual Review of Biochemistry , vol.72 , pp. 337-366
    • Verdine, G.L.1    Norman, D.P.G.2
  • 65
    • 42549128712 scopus 로고    scopus 로고
    • Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA
    • DOI 10.1038/nature06889, PII NATURE06889
    • Yang, C. G.; Yi, C.; Duguid, E. M.; Sullivan, C. T.; Jian, X.; Rice, P. A.; He, C. Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA Nature 2008, 452, 961-965 (Pubitemid 351589622)
    • (2008) Nature , vol.452 , Issue.7190 , pp. 961-965
    • Yang, C.-G.1    Yi, C.2    Duguid, E.M.3    Sullivan, C.T.4    Jian, X.5    Rice, P.A.6    He, C.7
  • 66
    • 74049151209 scopus 로고    scopus 로고
    • A non-heme iron-mediated chemical demethylation in DNA and RNA
    • Yi, C.; Yang, C. G.; He, C. A non-heme iron-mediated chemical demethylation in DNA and RNA Acc. Chem. Res. 2009, 42, 519-529
    • (2009) Acc. Chem. Res. , vol.42 , pp. 519-529
    • Yi, C.1    Yang, C.G.2    He, C.3
  • 67
  • 68
    • 58849116830 scopus 로고    scopus 로고
    • A New 1′-Methylenedisulfide Deoxyribose that Forms an Efficient Cross-Link to DNA Cytosine-5 Methyltransferase (DNMT)
    • Shigdel, U. K.; He, C. A New 1′-Methylenedisulfide Deoxyribose that Forms an Efficient Cross-Link to DNA Cytosine-5 Methyltransferase (DNMT) J. Am. Chem. Soc. 2008, 130, 17634-17635
    • (2008) J. Am. Chem. Soc. , vol.130 , pp. 17634-17635
    • Shigdel, U.K.1    He, C.2
  • 69
    • 0000330501 scopus 로고
    • Diazirines. II. Synthesis and properties of small functionalized diazirine molecules. Observations on the reaction of a diaziridine with the iodine-iodide ion system
    • Church, R. F. R.; Weiss, M. J. Diazirines. II. Synthesis and properties of small functionalized diazirine molecules. Observations on the reaction of a diaziridine with the iodine-iodide ion system J. Org. Chem. 1970, 35, 2465-2471
    • (1970) J. Org. Chem. , vol.35 , pp. 2465-2471
    • Church, R.F.R.1    Weiss, M.J.2
  • 70
    • 0034324021 scopus 로고    scopus 로고
    • Photoactivatable Reagents Based on Aryl(trifluoromethyl)diazirines: Synthesis and Application for Studying Nucleic Acid-Protein Interactions
    • DOI 10.1023/A:1026671624793
    • Korshunova, G. A.; Sumbatyan, N. V.; Topin, A. N.; Mtchedlidze, M. T. Photoactivatable Reagents Based on Aryl(trifluoromethyl)diazirines: Synthesis and Application for Studying Nucleic Acid-Protein Interactions Mol. Biol. 2000, 34, 823-839 (Pubitemid 33214743)
    • (2000) Molecular Biology , vol.34 , Issue.6 , pp. 823-839
    • Korshunova, G.A.1    Sumbatyan, N.V.2    Topin, A.N.3    Mtchedlidze, M.T.4
  • 71
    • 0001599016 scopus 로고
    • Synthesis of DNA containing modified bases by post-synthetic substitution. Synthesis of oligomers containing 4-substituted thymine: O4-alkylthymine, 5-methylcytosine, N4-dimethylamino-5-methylcytosine, and 4-thiothymine
    • Xu, Y. Z.; Zheng, Q.; Swann, P. F. Synthesis of DNA containing modified bases by post-synthetic substitution. Synthesis of oligomers containing 4-substituted thymine: O4-alkylthymine, 5-methylcytosine, N4-dimethylamino-5- methylcytosine, and 4-thiothymine J. Org. Chem. 1992, 57, 3839-3845
    • (1992) J. Org. Chem. , vol.57 , pp. 3839-3845
    • Xu, Y.Z.1    Zheng, Q.2    Swann, P.F.3
  • 72
    • 0025650326 scopus 로고
    • Synthesis of Functionally Tethered Oligodeoxynucleotides by the Convertible Nucleoside Approach
    • Macmillan, A. M.; Verdine, G. L. Synthesis of Functionally Tethered Oligodeoxynucleotides by the Convertible Nucleoside Approach J. Org. Chem. 1990, 55, 5931-5933
    • (1990) J. Org. Chem. , vol.55 , pp. 5931-5933
    • MacMillan, A.M.1    Verdine, G.L.2
  • 73
    • 0025969972 scopus 로고
    • Engineering Tethered DNA-Molecules by the Convertible Nucleoside Approach
    • Macmillan, A. M.; Verdine, G. L. Engineering Tethered DNA-Molecules by the Convertible Nucleoside Approach Tetrahedron 1991, 47, 2603-2616
    • (1991) Tetrahedron , vol.47 , pp. 2603-2616
    • MacMillan, A.M.1    Verdine, G.L.2
  • 75
    • 67749132423 scopus 로고    scopus 로고
    • Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
    • Chi, S. W.; Zang, J. B.; Mele, A.; Darnell, R. B. Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps Nature 2009, 460, 479-486
    • (2009) Nature , vol.460 , pp. 479-486
    • Chi, S.W.1    Zang, J.B.2    Mele, A.3    Darnell, R.B.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.