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Volumn 28, Issue 8, 2011, Pages 1483-1491

Analysis and direct quantification of Saccharomyces cerevisiae and Hanseniaspora guilliermondii populations during alcoholic fermentation by fluorescence in situ hybridization, flow cytometry and quantitative PCR

Author keywords

Culture independent methods; RNA stability; Wine; Yeast population dynamics

Indexed keywords

ALCOHOL;

EID: 80052969845     PISSN: 07400020     EISSN: 10959998     Source Type: Journal    
DOI: 10.1016/j.fm.2011.08.009     Document Type: Article
Times cited : (39)

References (34)
  • 1
    • 80052965316 scopus 로고    scopus 로고
    • Physiological studies of non-Saccharomyces wine-related strains in single and mixed cultures with S. cerevisiae. PhD Thesis, Catholic University of Portugal.
    • Albergaria, H. (2007). Physiological studies of non-Saccharomyces wine-related strains in single and mixed cultures with S. cerevisiae. PhD Thesis, Catholic University of Portugal.
    • (2007)
    • Albergaria, H.1
  • 2
    • 77950626974 scopus 로고    scopus 로고
    • Saccharomyces cerevisiae CCMI 885 secretes peptides that inhibit the growth of some non-Saccharomyces wine-related strains
    • Albergaria H., Francisco D., Gori K., Arneborg N., Gírio F. Saccharomyces cerevisiae CCMI 885 secretes peptides that inhibit the growth of some non-Saccharomyces wine-related strains. Appl. Microbiol. Biotechnol. 2010, 86:965-972.
    • (2010) Appl. Microbiol. Biotechnol. , vol.86 , pp. 965-972
    • Albergaria, H.1    Francisco, D.2    Gori, K.3    Arneborg, N.4    Gírio, F.5
  • 3
    • 0025294528 scopus 로고
    • Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
    • Amann R.I., Binder B.J., Olson R.J., Chisholm S.W., Devereux R., Stahl D.A. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl. Environ. Microbiol. 1990, 56:1919-1925.
    • (1990) Appl. Environ. Microbiol. , vol.56 , pp. 1919-1925
    • Amann, R.I.1    Binder, B.J.2    Olson, R.J.3    Chisholm, S.W.4    Devereux, R.5    Stahl, D.A.6
  • 4
    • 0035370087 scopus 로고    scopus 로고
    • The identification of microorganisms by fluorescence in situ hybridization
    • Amann R., Fuchs B.M., Behrens S. The identification of microorganisms by fluorescence in situ hybridization. Curr. Opin. Biotechnol. 2001, 12:231-236.
    • (2001) Curr. Opin. Biotechnol. , vol.12 , pp. 231-236
    • Amann, R.1    Fuchs, B.M.2    Behrens, S.3
  • 5
    • 49449091287 scopus 로고    scopus 로고
    • Effect of oenological practices on microbial populations using culture independent techniques
    • Andorrà I., Landi S., Mas A., Guillamón J.M., Esteve-Zarzoso B. Effect of oenological practices on microbial populations using culture independent techniques. Food Microbiol. 2008, 25:849-856.
    • (2008) Food Microbiol. , vol.25 , pp. 849-856
    • Andorrà, I.1    Landi, S.2    Mas, A.3    Guillamón, J.M.4    Esteve-Zarzoso, B.5
  • 6
    • 76349093822 scopus 로고    scopus 로고
    • Effect of fermentation temperature on microbial population evolution using culture independent and dependent techniques
    • Andorrà I., Landi S., Mas A., Esteve-Zarzoso B., Guillamón J.M. Effect of fermentation temperature on microbial population evolution using culture independent and dependent techniques. Food Res. Int. 2010, 43:773-779.
    • (2010) Food Res. Int. , vol.43 , pp. 773-779
    • Andorrà, I.1    Landi, S.2    Mas, A.3    Esteve-Zarzoso, B.4    Guillamón, J.M.5
  • 7
    • 0142043307 scopus 로고    scopus 로고
    • Development of specific fluorescent oligonucleotide probes for in situ identification of wine lactic acid bacteria
    • Blasco L., Ferrer S., Pardo I. Development of specific fluorescent oligonucleotide probes for in situ identification of wine lactic acid bacteria. FEMS Microbiol. Lett. 2003, 225:115-123.
    • (2003) FEMS Microbiol. Lett. , vol.225 , pp. 115-123
    • Blasco, L.1    Ferrer, S.2    Pardo, I.3
  • 8
    • 0034256049 scopus 로고    scopus 로고
    • Direct profiling of the yeast dynamics in wine fermentations
    • Cocolin L., Bisson L.F., Mills D.A. Direct profiling of the yeast dynamics in wine fermentations. FEMS Microbiol. Lett. 2000, 189:81-87.
    • (2000) FEMS Microbiol. Lett. , vol.189 , pp. 81-87
    • Cocolin, L.1    Bisson, L.F.2    Mills, D.A.3
  • 9
    • 0038044721 scopus 로고    scopus 로고
    • Wine yeast inhibition by sulphur dioxide: a comparison of culture-dependent and independent methods
    • Cocolin L., Mills D.A. Wine yeast inhibition by sulphur dioxide: a comparison of culture-dependent and independent methods. Am. J. Enol. Vitic. 2003, 54:125-130.
    • (2003) Am. J. Enol. Vitic. , vol.54 , pp. 125-130
    • Cocolin, L.1    Mills, D.A.2
  • 10
    • 0001957122 scopus 로고
    • Yeasts: growth during fermentation
    • Harwood Publishing, Switzerland, G.H. Fleet (Ed.)
    • Fleet G.H., Heard G.M. Yeasts: growth during fermentation. Wine Microbiology and Biotechnology 1993, 27-54. Harwood Publishing, Switzerland. G.H. Fleet (Ed.).
    • (1993) Wine Microbiology and Biotechnology , pp. 27-54
    • Fleet, G.H.1    Heard, G.M.2
  • 11
    • 0041870476 scopus 로고    scopus 로고
    • Yeast interactions and wine flavour
    • Fleet G.H. Yeast interactions and wine flavour. Int. J. Food Microbiol. 2003, 86:11-22.
    • (2003) Int. J. Food Microbiol. , vol.86 , pp. 11-22
    • Fleet, G.H.1
  • 12
    • 0033841434 scopus 로고    scopus 로고
    • Spatial distribution of 16S rRNA levels from uncultured acidobacteria in soil
    • Felske A., de Vos W.M., Akkermans A.D.L. Spatial distribution of 16S rRNA levels from uncultured acidobacteria in soil. Lett. Appl. Microbiol. 2000, 31:118-122.
    • (2000) Lett. Appl. Microbiol. , vol.31 , pp. 118-122
    • Felske, A.1    de Vos, W.M.2    Akkermans, A.D.L.3
  • 13
    • 17444451178 scopus 로고    scopus 로고
    • Comparative study of non-Saccharomyces microflora of musts in fermentation, by physiological and molecular methods
    • Fernández M.T., Ubeda J.F., Briones A.I. Comparative study of non-Saccharomyces microflora of musts in fermentation, by physiological and molecular methods. FEMS Microbiol. Lett. 1999, 173:223-229.
    • (1999) FEMS Microbiol. Lett. , vol.173 , pp. 223-229
    • Fernández, M.T.1    Ubeda, J.F.2    Briones, A.I.3
  • 14
    • 1942453431 scopus 로고    scopus 로고
    • Studying the dynamics of microbial populations during food fermentations
    • Giraffa G. Studying the dynamics of microbial populations during food fermentations. FEMS Microbiol. Rev. 2004, 28:251-260.
    • (2004) FEMS Microbiol. Rev. , vol.28 , pp. 251-260
    • Giraffa, G.1
  • 15
    • 46849102631 scopus 로고    scopus 로고
    • Molecular techniques in food fermentation: principles and applications
    • Springer Publishing Inc, New York, L. Cocolin, D. Ercolini (Eds.)
    • Giraffa G., Carminati D. Molecular techniques in food fermentation: principles and applications. Molecular Techniques in the Microbial Ecology of Fermented Food 2008, 1-30. Springer Publishing Inc, New York. L. Cocolin, D. Ercolini (Eds.).
    • (2008) Molecular Techniques in the Microbial Ecology of Fermented Food , pp. 1-30
    • Giraffa, G.1    Carminati, D.2
  • 16
    • 33751010778 scopus 로고    scopus 로고
    • Real-time quantitative PCR (QPCR) and reverse transcription-QPCR for detection and enumeration of total yeasts in wine
    • Hierro N., Esteve-Zarzoso B., González A., Mas A., Guillamón J.M. Real-time quantitative PCR (QPCR) and reverse transcription-QPCR for detection and enumeration of total yeasts in wine. Appl. Environ. Microbiol. 2006, 72:7148-7155.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 7148-7155
    • Hierro, N.1    Esteve-Zarzoso, B.2    González, A.3    Mas, A.4    Guillamón, J.M.5
  • 17
    • 35448937283 scopus 로고    scopus 로고
    • Monitoring of Saccharomyces and Hanseniaspora populations during alcoholic fermentation by real-time quantitative PCR
    • Hierro N., Esteve-Zarzoso B., Mas A., Guillamón J.M. Monitoring of Saccharomyces and Hanseniaspora populations during alcoholic fermentation by real-time quantitative PCR. FEMS Yeast Res. 2007, 7:1340-1349.
    • (2007) FEMS Yeast Res. , vol.7 , pp. 1340-1349
    • Hierro, N.1    Esteve-Zarzoso, B.2    Mas, A.3    Guillamón, J.M.4
  • 18
    • 18344405247 scopus 로고    scopus 로고
    • In situ accessibility of Saccharomyces cerevisiae 26S rRNA to Cy3-labeled oligonucleotide probes comprising the D1 and D2 domains
    • Inácio J., Behrens S., Fuchs B.M., Fonseca A., Spencer-Martins I., Amann R. In situ accessibility of Saccharomyces cerevisiae 26S rRNA to Cy3-labeled oligonucleotide probes comprising the D1 and D2 domains. Appl. Environ. Microbiol. 2003, 69:2899-2905.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 2899-2905
    • Inácio, J.1    Behrens, S.2    Fuchs, B.M.3    Fonseca, A.4    Spencer-Martins, I.5    Amann, R.6
  • 19
    • 46949095048 scopus 로고    scopus 로고
    • Recent advances in molecular techniques to study microbial communities in food-associated matrices and processes
    • Justé A., Thomma A.B.P.H.J., Lievens B. Recent advances in molecular techniques to study microbial communities in food-associated matrices and processes. Food Microbiol. 2008, 25:745-761.
    • (2008) Food Microbiol. , vol.25 , pp. 745-761
    • Justé, A.1    Thomma, A.B.P.H.J.2    Lievens, B.3
  • 20
    • 0034058404 scopus 로고    scopus 로고
    • The viable but non-culturable state of wine microorganisms during storage
    • Millet V., Lonvaud-Funel A. The viable but non-culturable state of wine microorganisms during storage. Lett. Appl. Microbiol. 2000, 30:136-141.
    • (2000) Lett. Appl. Microbiol. , vol.30 , pp. 136-141
    • Millet, V.1    Lonvaud-Funel, A.2
  • 21
    • 0036795785 scopus 로고    scopus 로고
    • Yeast diversity and persistence in botrytis-affected wine fermentations
    • Mills D.A., Johannsen E.A., Cocolin L. Yeast diversity and persistence in botrytis-affected wine fermentations. Appl. Environ. Microbiol. 2002, 68:4884-4893.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 4884-4893
    • Mills, D.A.1    Johannsen, E.A.2    Cocolin, L.3
  • 23
    • 0037341868 scopus 로고    scopus 로고
    • Viable Saccharomyces cerevisiae cells at high concentrations cause early growth arrest of non-Saccharomyces yeast in mixed cultures by a cell-cell-contact-mediated mechanism
    • Nissen P., Nielsen D., Arneborg N. Viable Saccharomyces cerevisiae cells at high concentrations cause early growth arrest of non-Saccharomyces yeast in mixed cultures by a cell-cell-contact-mediated mechanism. Yeast 2003, 20:331-341.
    • (2003) Yeast , vol.20 , pp. 331-341
    • Nissen, P.1    Nielsen, D.2    Arneborg, N.3
  • 24
    • 15944387317 scopus 로고    scopus 로고
    • The viable but non culturable state in bacteria
    • Oliver J.D. The viable but non culturable state in bacteria. J. Microbiol. 2005, 43:93-100.
    • (2005) J. Microbiol. , vol.43 , pp. 93-100
    • Oliver, J.D.1
  • 25
    • 33645957088 scopus 로고    scopus 로고
    • Cellular death of two non-Saccharomyces wine-related yeasts during mixed fermentations with Saccharomyces cerevisiae
    • Pérez-Nevado F., Albergaria H., Hogg T., Girio F. Cellular death of two non-Saccharomyces wine-related yeasts during mixed fermentations with Saccharomyces cerevisiae. Int. J. Food Microbiol. 2006, 108:336-345.
    • (2006) Int. J. Food Microbiol. , vol.108 , pp. 336-345
    • Pérez-Nevado, F.1    Albergaria, H.2    Hogg, T.3    Girio, F.4
  • 26
    • 2142745367 scopus 로고    scopus 로고
    • Real-time PCR assay for detection and enumeration of Dekkera bruxellensis in wine
    • Phister T.G., Mills D.A. Real-time PCR assay for detection and enumeration of Dekkera bruxellensis in wine. Appl. Environ. Microbiol. 2003, 69:7430-7434.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 7430-7434
    • Phister, T.G.1    Mills, D.A.2
  • 27
    • 17444365485 scopus 로고    scopus 로고
    • Culture-dependent and -independent methods to investigate the microbial ecology of Italian fermented sausages
    • Rantsiou K., Urso R., Lacumin L., Cantoni C., Cattaneo P., Comi G., Cocolin L. Culture-dependent and -independent methods to investigate the microbial ecology of Italian fermented sausages. Appl. Environ. Microbiol. 2005, 71:1977-1986.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 1977-1986
    • Rantsiou, K.1    Urso, R.2    Lacumin, L.3    Cantoni, C.4    Cattaneo, P.5    Comi, G.6    Cocolin, L.7
  • 28
    • 0037445321 scopus 로고    scopus 로고
    • Fluorescent hybridisation combined with flow cytometry and hybridisation of total RNA to analyse the composition of microbial communities in human faeces using 16S rRNA probes
    • Rigottier-Gois L., Bourhis A.G., Gramet G., Rochet V., Doré J. Fluorescent hybridisation combined with flow cytometry and hybridisation of total RNA to analyse the composition of microbial communities in human faeces using 16S rRNA probes. FEMS Microbiol. Ecol. 2003, 43:237-245.
    • (2003) FEMS Microbiol. Ecol. , vol.43 , pp. 237-245
    • Rigottier-Gois, L.1    Bourhis, A.G.2    Gramet, G.3    Rochet, V.4    Doré, J.5
  • 31
    • 0027339723 scopus 로고
    • Optimizing fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes for flow cytometry identification of microorganisms
    • Wallner G., Amann R., Beisker W. Optimizing fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes for flow cytometry identification of microorganisms. Cytometry 1993, 14:136-143.
    • (1993) Cytometry , vol.14 , pp. 136-143
    • Wallner, G.1    Amann, R.2    Beisker, W.3
  • 32
    • 85143848022 scopus 로고
    • Ribosomal RNA analysis of microorganisms as they occur in nature
    • Plenum Press, New York, K.C. Marshall (Ed.)
    • Ward D.M., Bateson M.M., Weller R., Ruff-Roberts A.L. Ribosomal RNA analysis of microorganisms as they occur in nature. Advances in Microbial Ecology 1992, vol. 12:219-286. Plenum Press, New York. K.C. Marshall (Ed.).
    • (1992) Advances in Microbial Ecology , vol.12 , pp. 219-286
    • Ward, D.M.1    Bateson, M.M.2    Weller, R.3    Ruff-Roberts, A.L.4
  • 33
    • 33645929060 scopus 로고    scopus 로고
    • Application of fluorescence in situ hybridization (FISH) to the analysis of yeast population dynamics in winery and laboratory grape must fermentations
    • Xufre A., Albergaria H., Inacio J., Spencer-Martins I., Girio F. Application of fluorescence in situ hybridization (FISH) to the analysis of yeast population dynamics in winery and laboratory grape must fermentations. Int. J. Food Microbiol. 2006, 108:376-384.
    • (2006) Int. J. Food Microbiol. , vol.108 , pp. 376-384
    • Xufre, A.1    Albergaria, H.2    Inacio, J.3    Spencer-Martins, I.4    Girio, F.5


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