-
1
-
-
0031815749
-
How do small single-domain proteins fold?
-
Jackson, S.E. How do small single-domain proteins fold? Fold. Des., 1998, 3 (4), R81-R91.
-
(1998)
Fold. Des
, vol.3
, Issue.4
-
-
Jackson, S.E.1
-
2
-
-
27844584367
-
Industrial relevance of thermophilic Archaea
-
Egorova, K.; Antranikian, G. Industrial relevance of thermophilic Archaea. Curr. Opin. Microbiol., 2005, 8 (6), 649-655.
-
(2005)
Curr. Opin. Microbiol
, vol.8
, Issue.6
, pp. 649-655
-
-
Egorova, K.1
Antranikian, G.2
-
3
-
-
0032502839
-
Contact order, transition state placement and the refolding rates of single domain proteins
-
Plaxco, K.W.; Simons, K.T.; Baker, D. Contact order, transition state placement and the refolding rates of single domain proteins. J. Mol. Biol., 1998, 277 (4), 985-994.
-
(1998)
J. Mol. Biol
, vol.277
, Issue.4
, pp. 985-994
-
-
Plaxco, K.W.1
Simons, K.T.2
Baker, D.3
-
4
-
-
0035967862
-
Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: Application of long-range order to folding rate prediction
-
Gromiha, M.M.; Selvaraj, S. Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: application of long-range order to folding rate prediction. J. Mol. Biol., 2001, 310 (1), 27-32.
-
(2001)
J. Mol. Biol
, vol.310
, Issue.1
, pp. 27-32
-
-
Gromiha, M.M.1
Selvaraj, S.2
-
5
-
-
0036215854
-
Folding rate prediction using total contact distance
-
Zhou, H.; Zhou, Y. Folding rate prediction using total contact distance. Biophys. J., 2002, 82 (1 Pt 1), 458-463.
-
(2002)
Biophys. J
, vol.82
, Issue.1 Pt 1
, pp. 458-463
-
-
Zhou, H.1
Zhou, Y.2
-
6
-
-
0037375366
-
Prediction of folding rates and transition-state placement from native-state geometry
-
Micheletti, C. Prediction of folding rates and transition-state placement from native-state geometry. Proteins, 2003, 51 (1), 74-84.
-
(2003)
Proteins
, vol.51
, Issue.1
, pp. 74-84
-
-
Micheletti, C.1
-
7
-
-
66149112049
-
Multiple contact network is a key determinant to protein folding rates
-
Gromiha, M.M. Multiple contact network is a key determinant to protein folding rates. J. Chem. Inf. Model., 2009, 49 (4), 1130-1135.
-
(2009)
J. Chem. Inf. Model
, vol.49
, Issue.4
, pp. 1130-1135
-
-
Gromiha, M.M.1
-
8
-
-
39349111249
-
Understanding the folding rates and folding nuclei of globular proteins
-
Finkelstein, A.V.; Ivankov, D.N.; Garbuzynskiy, S.O.; Galzitskaya, O.V. Understanding the folding rates and folding nuclei of globular proteins. Curr. Prot. Pept. Sci., 2007, 8 (6), 521-536.
-
(2007)
Curr. Prot. Pept. Sci
, vol.8
, Issue.6
, pp. 521-536
-
-
Finkelstein, A.V.1
Ivankov, D.N.2
Garbuzynskiy, S.O.3
Galzitskaya, O.V.4
-
9
-
-
0025370815
-
Dominant forces in protein folding
-
Dill, K.A. Dominant forces in protein folding. Biochemistry, 1990, 29 (31), 7133-7155.
-
(1990)
Biochemistry
, vol.29
, Issue.31
, pp. 7133-7155
-
-
Dill, K.A.1
-
10
-
-
0028068751
-
On the conformational stability of oligonucleotide duplexes and tRNA molecules
-
Ponnuswamy, P.K.; Gromiha, M.M. On the conformational stability of oligonucleotide duplexes and tRNA molecules. J. Theor. Biol., 1994, 169 (4), 419-432.
-
(1994)
J. Theor. Biol
, vol.169
, Issue.4
, pp. 419-432
-
-
Ponnuswamy, P.K.1
Gromiha, M.M.2
-
11
-
-
0025019350
-
Conformational stability of globular proteins
-
Pace, C.N. Conformational stability of globular proteins. Trends Biochem. Sci., 1990, 15 (1), 14-17.
-
(1990)
Trends Biochem. Sci
, vol.15
, Issue.1
, pp. 14-17
-
-
Pace, C.N.1
-
12
-
-
0032916868
-
ProTherm: Thermodynamic Database for Proteins and Mutants
-
Gromiha, M.M.; An, J.; Kono, H.; Oobatake, M.; Uedaira, H.; Sarai, A. ProTherm: Thermodynamic Database for Proteins and Mutants. Nucleic Acids Res., 1999, 27 (1), 286-288.
-
(1999)
Nucleic Acids Res
, vol.27
, Issue.1
, pp. 286-288
-
-
Gromiha, M.M.1
An, J.2
Kono, H.3
Oobatake, M.4
Uedaira, H.5
Sarai, A.6
-
13
-
-
77952783129
-
Thermodynamic database for proteins: Features and applications
-
Gromiha, M.M.; Sarai, A. Thermodynamic database for proteins: features and applications. Methods Mol. Biol., 2010, 609, 97-112.
-
(2010)
Methods Mol. Biol
, vol.609
, pp. 97-112
-
-
Gromiha, M.M.1
Sarai, A.2
-
14
-
-
0029873155
-
Stability changes upon mutation of solvent-accessible residues in proteins evaluated by database-derived potentials
-
Gilis, D.; Rooman, M. Stability changes upon mutation of solvent-accessible residues in proteins evaluated by database-derived potentials. J. Mol. Biol., 1996, 257 (5), 1112-1126.
-
(1996)
J. Mol. Biol
, vol.257
, Issue.5
, pp. 1112-1126
-
-
Gilis, D.1
Rooman, M.2
-
15
-
-
33845664889
-
Structural analysis and prediction of protein mutant stability using distance and torsion potentials: Role of secondary structure and solvent accessibility
-
Parthiban, V.; Gromiha, M.M.; Hoppe, C.; Schomburg, D. Structural analysis and prediction of protein mutant stability using distance and torsion potentials: role of secondary structure and solvent accessibility. Proteins, 2007, 66 (1), 41-52.
-
(2007)
Proteins
, vol.66
, Issue.1
, pp. 41-52
-
-
Parthiban, V.1
Gromiha, M.M.2
Hoppe, C.3
Schomburg, D.4
-
16
-
-
0031023842
-
Prediction of the stability of protein mutants based on structural environment-dependent amino acid substitution and propensity tables
-
Topham, C.M.; Srinivasan, N.; Blundell, T.L. Prediction of the stability of protein mutants based on structural environment-dependent amino acid substitution and propensity tables. Prot. Eng., 1997, 10 (1), 7-21.
-
(1997)
Prot. Eng
, vol.10
, Issue.1
, pp. 7-21
-
-
Topham, C.M.1
Srinivasan, N.2
Blundell, T.L.3
-
17
-
-
0032773941
-
Role of structural and sequence information in the prediction of protein stability changes: Comparison between buried and partially buried mutations
-
Gromiha, M.M.; Oobatake, M.; Kono, H.; Uedaira, H.; Sarai, A. Role of structural and sequence information in the prediction of protein stability changes: comparison between buried and partially buried mutations. Prot. Eng., 1999, 12 (7), 549-555.
-
(1999)
Prot. Eng
, vol.12
, Issue.7
, pp. 549-555
-
-
Gromiha, M.M.1
Oobatake, M.2
Kono, H.3
Uedaira, H.4
Sarai, A.5
-
18
-
-
0032863182
-
Relationship between amino acid properties and protein stability: Buried mutations
-
Gromiha, M.M.; Oobatake, M.; Kono, H.; Uedaira, H.; Sarai, A. Relationship between amino acid properties and protein stability: buried mutations. J. Prot. Chem., 1999, 18 (5), 565-578.
-
(1999)
J. Prot. Chem
, vol.18
, Issue.5
, pp. 565-578
-
-
Gromiha, M.M.1
Oobatake, M.2
Kono, H.3
Uedaira, H.4
Sarai, A.5
-
19
-
-
0033747515
-
Importance of surrounding residues for protein stability of partially buried mutations
-
Gromiha, M.M.; Oobatake, M.; Kono, H.; Uedaira, H.; Sarai, A. Importance of surrounding residues for protein stability of partially buried mutations. J. Biomol. Struct. Dyn., 2000, 18 (2), 281-295.
-
(2000)
J. Biomol. Struct. Dyn
, vol.18
, Issue.2
, pp. 281-295
-
-
Gromiha, M.M.1
Oobatake, M.2
Kono, H.3
Uedaira, H.4
Sarai, A.5
-
20
-
-
0037025821
-
Importance of mutant position in Ramachandran plot for predicting protein stability of surface mutations
-
Gromiha, M.M.; Oobatake, M.; Kono, H.; Uedaira, H.; Sarai, A. Importance of mutant position in Ramachandran plot for predicting protein stability of surface mutations. Biopolymers, 2002, 64 (4), 210-220.
-
(2002)
Biopolymers
, vol.64
, Issue.4
, pp. 210-220
-
-
Gromiha, M.M.1
Oobatake, M.2
Kono, H.3
Uedaira, H.4
Sarai, A.5
-
21
-
-
0037834835
-
Factors influencing the thermal stability of buried protein mutants
-
Gromiha, M.M. Factors influencing the thermal stability of buried protein mutants. Polymer, 2003, 44 (14), 4061-4066.
-
(2003)
Polymer
, vol.44
, Issue.14
, pp. 4061-4066
-
-
Gromiha, M.M.1
-
22
-
-
68349156292
-
Revisiting reverse hydrophobic effect: Applicable only to coil mutations at the surface
-
Gromiha, M.M. Revisiting reverse hydrophobic effect: applicable only to coil mutations at the surface. Biopolymers, 2009, 91 (7), 591-599.
-
(2009)
Biopolymers
, vol.91
, Issue.7
, pp. 591-599
-
-
Gromiha, M.M.1
-
23
-
-
0036291145
-
Predicting changes in the stability of proteins and protein complexes: A study of more than 1000 mutations
-
Guerois, R.; Nielsen, J.E.; Serrano, L. Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations. J. Mol. Biol., 2002, 320 (2), 369-387.
-
(2002)
J. Mol. Biol
, vol.320
, Issue.2
, pp. 369-387
-
-
Guerois, R.1
Nielsen, J.E.2
Serrano, L.3
-
24
-
-
4544334447
-
Large-scale prediction of protein geometry and stability changes for arbitrary single point mutations
-
Bordner, A.J.; Abagyan, R.A. Large-scale prediction of protein geometry and stability changes for arbitrary single point mutations. Proteins, 2004, 57 (2), 400-413.
-
(2004)
Proteins
, vol.57
, Issue.2
, pp. 400-413
-
-
Bordner, A.J.1
Abagyan, R.A.2
-
25
-
-
34249777526
-
Eris: An automated estimator of protein stability
-
Yin, S.; Ding, F.; Dokholyan, N.V. Eris: an automated estimator of protein stability. Nat. Methods, 2007, 4 (6), 466-467.
-
(2007)
Nat. Methods
, vol.4
, Issue.6
, pp. 466-467
-
-
Yin, S.1
Ding, F.2
Dokholyan, N.V.3
-
26
-
-
0036893044
-
Stability scale and atomic solvation parameters extracted from 1023 mutation experiments
-
Zhou, H.; Zhou, Y. Stability scale and atomic solvation parameters extracted from 1023 mutation experiments. Proteins, 2002, 49 (4), 483-492.
-
(2002)
Proteins
, vol.49
, Issue.4
, pp. 483-492
-
-
Zhou, H.1
Zhou, Y.2
-
27
-
-
1242294472
-
Can contact potentials reliably predict stability of proteins
-
Khatun, J.; Khare, S.D.; Dokholyan, N.V. Can contact potentials reliably predict stability of proteins? J. Mol. Biol., 2004, 336 (5), 1223-1238.
-
(2004)
J. Mol. Biol
, vol.336
, Issue.5
, pp. 1223-1238
-
-
Khatun, J.1
Khare, S.D.2
Dokholyan, N.V.3
-
28
-
-
12444274892
-
Relative importance of secondary structure and solvent accessibility to the stability of protein mutants. A case study with amino acid properties and energetics on T4 and human lysozymes
-
Saraboji, K.; Gromiha, M.M.; Ponnuswamy, M.N. Relative importance of secondary structure and solvent accessibility to the stability of protein mutants. A case study with amino acid properties and energetics on T4 and human lysozymes. Comput. Biol. Chem., 2005, 29 (1), 25-35.
-
(2005)
Comput. Biol. Chem
, vol.29
, Issue.1
, pp. 25-35
-
-
Saraboji, K.1
Gromiha, M.M.2
Ponnuswamy, M.N.3
-
29
-
-
33646053131
-
Average assignment method for predicting the stability of protein mutants
-
Saraboji, K.; Gromiha, M.M.; Ponnuswamy, M.N. Average assignment method for predicting the stability of protein mutants. Biopolymers, 2006, 82 (1), 80-92.
-
(2006)
Biopolymers
, vol.82
, Issue.1
, pp. 80-92
-
-
Saraboji, K.1
Gromiha, M.M.2
Ponnuswamy, M.N.3
-
30
-
-
11844281294
-
A neural-network-based method for predicting protein stability changes upon single point mutations
-
Capriotti, E.; Fariselli, P.; Casadio, R. A neural-network-based method for predicting protein stability changes upon single point mutations. Bioinformatics, 2004, 20 Suppl 1, i63-i68.
-
(2004)
Bioinformatics
, vol.20
, Issue.SUPPL. 1
-
-
Capriotti, E.1
Fariselli, P.2
Casadio, R.3
-
31
-
-
27544469800
-
Predicting protein stability changes from sequences using support vector machines
-
Capriotti, E.; Fariselli, P.; Calabrese, R.; Casadio, R. Predicting protein stability changes from sequences using support vector machines. Bioinformatics, 2005, 21 Suppl 2, ii54-ii58.
-
Bioinformatics
, vol.2005
, Issue.21 SUPPL 2
-
-
Capriotti, E.1
Fariselli, P.2
Calabrese, R.3
Casadio, R.4
-
32
-
-
33644847172
-
Prediction of protein stability changes for single-site mutations using support vector machines
-
Cheng, J.; Randall, A.; Baldi, P. Prediction of protein stability changes for single-site mutations using support vector machines. Proteins, 2006, 62 (4), 1125-1132.
-
(2006)
Proteins
, vol.62
, Issue.4
, pp. 1125-1132
-
-
Cheng, J.1
Randall, A.2
Baldi, P.3
-
33
-
-
51749110028
-
Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis
-
Masso, M.; Vaisman, I.I. Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis. Bioinformatics, 2008, 24 (18), 2002-2009.
-
(2008)
Bioinformatics
, vol.24
, Issue.18
, pp. 2002-2009
-
-
Masso, M.1
Vaisman, I.I.2
-
34
-
-
61849134386
-
Robust prediction of mutation-induced protein stability change by property encoding of amino acids
-
Kang, S.; Chen, G.; Xiao, G. Robust prediction of mutation-induced protein stability change by property encoding of amino acids. Prot. Eng. Des. Sel., 2009, 22 (2), 75-83.
-
(2009)
Prot. Eng. Des. Sel
, vol.22
, Issue.2
, pp. 75-83
-
-
Kang, S.1
Chen, G.2
Xiao, G.3
-
35
-
-
34447338865
-
IPTREE-STAB: Interpretable decision tree based method for predicting protein stability changes upon mutations
-
Huang, L.T.; Gromiha, M.M.; Ho, S.Y. IPTREE-STAB: interpretable decision tree based method for predicting protein stability changes upon mutations. Bioinformatics, 2007, 23 (10), 1292-1293.
-
(2007)
Bioinformatics
, vol.23
, Issue.10
, pp. 1292-1293
-
-
Huang, L.T.1
Gromiha, M.M.2
Ho, S.Y.3
-
36
-
-
33846396137
-
Prediction of protein mutant stability using classification and regression tool
-
Huang, L.T.; Saraboji, K.; Ho, S.Y.; Hwang, S.F.; Ponnuswamy, M.N.; Gromiha, M.M. Prediction of protein mutant stability using classification and regression tool. Biophys. Chem., 2007, 125 (2-3), 462-470.
-
(2007)
Biophys. Chem
, vol.125
, Issue.2-3
, pp. 462-470
-
-
Huang, L.T.1
Saraboji, K.2
Ho, S.Y.3
Hwang, S.F.4
Ponnuswamy, M.N.5
Gromiha, M.M.6
-
37
-
-
33745380521
-
Amino Acid Sequence Autocorrelation vectors and ensembles of Bayesian-Regularized Genetic Neural Networks for prediction of conformational stability of human lysozyme mutants
-
Caballero, J.; Fernandez, L.; Abreu, J.I.; Fernandez, M. Amino Acid Sequence Autocorrelation vectors and ensembles of Bayesian-Regularized Genetic Neural Networks for prediction of conformational stability of human lysozyme mutants. J. Chem. Inf. Model., 2006, 46 (3), 1255-1268.
-
(2006)
J. Chem. Inf. Model
, vol.46
, Issue.3
, pp. 1255-1268
-
-
Caballero, J.1
Fernandez, L.2
Abreu, J.I.3
Fernandez, M.4
-
38
-
-
77949517296
-
A novel scoring function for discriminating hyperthermophilic and mesophilic proteins with application to predicting relative thermostability of protein mutants
-
Li, Y.; Middaugh, C.R.; Fang, J. A novel scoring function for discriminating hyperthermophilic and mesophilic proteins with application to predicting relative thermostability of protein mutants. BMC Bioinformatics, 2010, 11 (1), 62.
-
(2010)
BMC Bioinformatics
, vol.11
, Issue.1
, pp. 62
-
-
Li, Y.1
Middaugh, C.R.2
Fang, J.3
-
39
-
-
70349847872
-
Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMuSiC-2.0
-
Dehouck, Y.; Grosfils, A.; Folch, B.; Gilis, D.; Bogaerts, P.; Rooman, M. Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMuSiC-2.0. Bioinformatics, 2009, 25 (19), 2537-2543.
-
(2009)
Bioinformatics
, vol.25
, Issue.19
, pp. 2537-2543
-
-
Dehouck, Y.1
Grosfils, A.2
Folch, B.3
Gilis, D.4
Bogaerts, P.5
Rooman, M.6
-
40
-
-
33846054321
-
Protein Folding Database (PFD 2.0): An online environment for the International Foldeomics Consortium
-
(Database issue)
-
Fulton, K.F.; Bate, M.A.; Faux, N.G.; Mahmood, K.; Betts, C.; Buckle, A.M. Protein Folding Database (PFD 2.0): an online environment for the International Foldeomics Consortium. Nucleic Acids Res., 2007, 35 (Database issue), D304-D307.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Fulton, K.F.1
Bate, M.A.2
Faux, N.G.3
Mahmood, K.4
Betts, C.5
Buckle, A.M.6
-
41
-
-
58149199581
-
KineticDB: A database of protein folding kinetics
-
(Database issue)
-
Bogatyreva, N.S.; Osypov, A.A.; Ivankov, D.N. KineticDB: a database of protein folding kinetics. Nucleic Acids Res., 2009, 37 (Database issue), D342-D346.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Bogatyreva, N.S.1
Osypov, A.A.2
Ivankov, D.N.3
-
43
-
-
16344383328
-
Application of residue distribution along the sequence for discriminating outer membrane proteins
-
Gromiha, M.M.; Ahmad, S.; Suwa, M. Application of residue distribution along the sequence for discriminating outer membrane proteins. Comput. Biol. Chem., 2005, 29 (2), 135-142.
-
(2005)
Comput. Biol. Chem
, vol.29
, Issue.2
, pp. 135-142
-
-
Gromiha, M.M.1
Ahmad, S.2
Suwa, M.3
-
44
-
-
38549155006
-
AAindex: Amino acid index database, progress report 2008
-
(Database issue)
-
Kawashima, S.; Pokarowski, P.; Pokarowska, M.; Kolinski, A.; Katayama, T.; Kanehisa, M. AAindex: amino acid index database, progress report 2008. Nucleic Acids Res., 2008, 36 (Database issue), D202-D205.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Kawashima, S.1
Pokarowski, P.2
Pokarowska, M.3
Kolinski, A.4
Katayama, T.5
Kanehisa, M.6
-
45
-
-
43149103140
-
ROC analysis: Applications to the classification of biological sequences and 3D structures
-
Sonego, P.; Kocsor, A.; Pongor, S. ROC analysis: applications to the classification of biological sequences and 3D structures. Brief Bioinform., 2008, 9 (3), 198-209.
-
(2008)
Brief Bioinform
, vol.9
, Issue.3
, pp. 198-209
-
-
Sonego, P.1
Kocsor, A.2
Pongor, S.3
-
46
-
-
1842464687
-
Inter-residue interactions in protein folding and stability
-
Gromiha, M.M.; Selvaraj, S. Inter-residue interactions in protein folding and stability. Prog. Biophys. Mol. Biol., 2004, 86 (2), 235-277.
-
(2004)
Prog. Biophys. Mol. Biol
, vol.86
, Issue.2
, pp. 235-277
-
-
Gromiha, M.M.1
Selvaraj, S.2
-
47
-
-
0036678120
-
Experimental evaluation of topological parameters determining protein-folding rates
-
Miller, E.J.; Fischer, K.F.; Marqusee, S. Experimental evaluation of topological parameters determining protein-folding rates. Proc. Natl. Acad. Sci. USA, 2002, 99 (16), 10359-10363.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, Issue.16
, pp. 10359-10363
-
-
Miller, E.J.1
Fischer, K.F.2
Marqusee, S.3
-
48
-
-
0033521194
-
First principles prediction of protein folding rates
-
Debe, D.A.; Goddard, W.A. 3rd, First principles prediction of protein folding rates. J. Mol. Biol., 1999, 294 (3), 619-625.
-
(1999)
J. Mol. Biol
, vol.294
, Issue.3
, pp. 619-625
-
-
Debe, D.A.1
Goddard, W.A.2
-
49
-
-
0033613165
-
A simple model for calculating the kinetics of protein folding from three-dimensional structures
-
Munoz, V.; Eaton, W.A. A simple model for calculating the kinetics of protein folding from three-dimensional structures. Proc. Natl. Acad. Sci. USA, 1999, 96 (20), 11311-11316.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, Issue.20
, pp. 11311-11316
-
-
Munoz, V.1
Eaton, W.A.2
-
50
-
-
0035173844
-
The roles of stability and contact order in determining protein folding rates
-
Dinner, A.R.; Karplus, M. The roles of stability and contact order in determining protein folding rates. Nat. Struct. Biol., 2001, 8 (1), 21-22.
-
(2001)
Nat. Struct. Biol
, vol.8
, Issue.1
, pp. 21-22
-
-
Dinner, A.R.1
Karplus, M.2
-
51
-
-
0037133574
-
How the folding rate constant of simple, single-domain proteins depends on the number of native contacts
-
Makarov, D.E.; Keller, C.A.; Plaxco, K.W.; Metiu, H. How the folding rate constant of simple, single-domain proteins depends on the number of native contacts. Proc. Natl. Acad. Sci. USA, 2002, 99 (6), 3535-3539.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, Issue.6
, pp. 3535-3539
-
-
Makarov, D.E.1
Keller, C.A.2
Plaxco, K.W.3
Metiu, H.4
-
52
-
-
0037215268
-
The topomer search model: A simple, quantitative theory of two-state protein folding kinetics
-
Makarov, D.E.; Plaxco, K.W. The topomer search model: A simple, quantitative theory of two-state protein folding kinetics. Prot. Sci., 2003, 12 (1), 17-26.
-
(2003)
Prot. Sci
, vol.12
, Issue.1
, pp. 17-26
-
-
Makarov, D.E.1
Plaxco, K.W.2
-
53
-
-
0037173002
-
Topological determinants of protein folding
-
Dokholyan, N. V.; Li, L.; Ding, F.; Shakhnovich, E. I. Topological determinants of protein folding. Proc. Natl. Acad. Sci. USA, 2002, 99 (13), 8637-8641.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, Issue.13
, pp. 8637-8641
-
-
Dokholyan, N.V.1
Li, L.2
Ding, F.3
Shakhnovich, E.I.4
-
54
-
-
0346003776
-
Folding rate prediction based on neural network model
-
Zhang, L.; Li, J.; Jiang, Z.; Xia, A. Folding rate prediction based on neural network model. Polymer, 2003, 44 (5), 1751-1756.
-
(2003)
Polymer
, vol.44
, Issue.5
, pp. 1751-1756
-
-
Zhang, L.1
Li, J.2
Jiang, Z.3
Xia, A.4
-
55
-
-
0141959709
-
Importance of native-state topology for determining the folding rate of two-state proteins
-
Gromiha, M.M. Importance of native-state topology for determining the folding rate of two-state proteins. J. Chem. Inf. Comput. Sci., 2003, 43 (5), 1481-1485.
-
(2003)
J. Chem. Inf. Comput. Sci
, vol.43
, Issue.5
, pp. 1481-1485
-
-
Gromiha, M.M.1
-
56
-
-
0037402639
-
Chain length is the main determinant of the folding rate for proteins with three-state folding kinetics
-
Galzitskaya, O.V.; Garbuzynskiy, S.O.; Ivankov, D.N.; Finkelstein, A.V. Chain length is the main determinant of the folding rate for proteins with three-state folding kinetics. Proteins, 2003, 51 (2), 162-166.
-
(2003)
Proteins
, vol.51
, Issue.2
, pp. 162-166
-
-
Galzitskaya, O.V.1
Garbuzynskiy, S.O.2
Ivankov, D.N.3
Finkelstein, A.V.4
-
57
-
-
0042510944
-
Contact order revisited: Influence of protein size on the folding rate
-
Ivankov, D.N.; Garbuzynskiy, S.O.; Alm, E.; Plaxco, K.W.; Baker, D.; Finkelstein, A.V. Contact order revisited: influence of protein size on the folding rate. Prot. Sci., 2003, 12 (9), 2057-2062.
-
(2003)
Prot. Sci
, vol.12
, Issue.9
, pp. 2057-2062
-
-
Ivankov, D.N.1
Garbuzynskiy, S.O.2
Alm, E.3
Plaxco, K.W.4
Baker, D.5
Finkelstein, A.V.6
-
58
-
-
67849124732
-
Protein folding rates and stability: How much is there beyond size
-
De Sancho, D.; Doshi, U.; Munoz, V. Protein folding rates and stability: how much is there beyond size? J. Am. Chem. Soc., 2009, 131 (6), 2074-2075.
-
(2009)
J. Am. Chem. Soc
, vol.131
, Issue.6
, pp. 2074-2075
-
-
de Sancho, D.1
Doshi, U.2
Munoz, V.3
-
59
-
-
0037566828
-
A simple parameter relating sequences with folding rates of small alpha helical proteins
-
Shao, H.; Peng, Y.; Zeng, Z.H. A simple parameter relating sequences with folding rates of small alpha helical proteins. Prot. Pept. Lett., 2003, 10 (3), 277-280.
-
(2003)
Prot. Pept. Lett
, vol.10
, Issue.3
, pp. 277-280
-
-
Shao, H.1
Peng, Y.2
Zeng, Z.H.3
-
60
-
-
0038693127
-
Structural determinants of the rate of protein folding
-
Nolting, B.; Schalike, W.; Hampel, P.; Grundig, F.; Gantert, S.; Sips, N.; Bandlow, W.; Qi, P.X. Structural determinants of the rate of protein folding. J. Theor. Biol., 2003, 223 (3), 299-307.
-
(2003)
J. Theor. Biol
, vol.223
, Issue.3
, pp. 299-307
-
-
Nolting, B.1
Schalike, W.2
Hampel, P.3
Grundig, F.4
Gantert, S.5
Sips, N.6
Bandlow, W.7
Qi, P.X.8
-
61
-
-
11144269751
-
Folding rate prediction using n-order contact distance for proteins with two- and three-state folding kinetics
-
Zhang, L.; Sun, T. Folding rate prediction using n-order contact distance for proteins with two- and three-state folding kinetics. Biophys. Chem., 2005, 113 (1), 9-16.
-
(2005)
Biophys. Chem
, vol.113
, Issue.1
, pp. 9-16
-
-
Zhang, L.1
Sun, T.2
-
62
-
-
35648931551
-
On the role of structural class of a protein with two-state folding kinetics in determining correlations between its size, topology, and folding rate
-
Istomin, A.Y.; Jacobs, D.J.; Livesay, D.R. On the role of structural class of a protein with two-state folding kinetics in determining correlations between its size, topology, and folding rate. Prot. Sci., 2007, 16 (11), 2564-2569.
-
(2007)
Prot. Sci
, vol.16
, Issue.11
, pp. 2564-2569
-
-
Istomin, A.Y.1
Jacobs, D.J.2
Livesay, D.R.3
-
63
-
-
38949121906
-
Bioinformatics Approaches for Understanding and Predicting Protein Folding Rates
-
Gromiha, M.M.; Selvaraj, S. Bioinformatics Approaches for Understanding and Predicting Protein Folding Rates. Curr. Bioinform., 2008, 3 (1), 1-9.
-
(2008)
Curr. Bioinform
, vol.3
, Issue.1
, pp. 1-9
-
-
Gromiha, M.M.1
Selvaraj, S.2
-
64
-
-
77749324277
-
Cooperativity and protein folding rates
-
Portman, J.J. Cooperativity and protein folding rates. Curr. Opin. Struct. Biol., 2010, 20 (1), 11-15.
-
(2010)
Curr. Opin. Struct. Biol
, vol.20
, Issue.1
, pp. 11-15
-
-
Portman, J.J.1
-
65
-
-
0037432567
-
Local secondary structure content predicts folding rates for simple, two-state proteins
-
Gong, H.; Isom, D.G.; Srinivasan, R.; Rose, G.D. Local secondary structure content predicts folding rates for simple, two-state proteins. J. Mol. Biol., 2003, 327 (5), 1149-1154.
-
(2003)
J. Mol. Biol
, vol.327
, Issue.5
, pp. 1149-1154
-
-
Gong, H.1
Isom, D.G.2
Srinivasan, R.3
Rose, G.D.4
-
66
-
-
2942689229
-
Prediction of protein folding rates from the amino acid sequence-predicted secondary structure
-
Ivankov, D.N.; Finkelstein, A.V. Prediction of protein folding rates from the amino acid sequence-predicted secondary structure. Proc. Natl. Acad. Sci. USA, 2004, 101 (24), 8942-4.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, Issue.24
, pp. 8942-8944
-
-
Ivankov, D.N.1
Finkelstein, A.V.2
-
67
-
-
18344371857
-
A statistical model for predicting protein folding rates from amino acid sequence with structural class information
-
Gromiha, M.M. A statistical model for predicting protein folding rates from amino acid sequence with structural class information. J. Chem. Inf. Model., 2005, 45 (2), 494-501.
-
(2005)
J. Chem. Inf. Model
, vol.45
, Issue.2
, pp. 494-501
-
-
Gromiha, M.M.1
-
68
-
-
17144369578
-
Protein folding rates estimated from contact predictions
-
Punta, M.; Rost, B. Protein folding rates estimated from contact predictions. J. Mol. Biol., 2005, 348 (3), 507-512.
-
(2005)
J. Mol. Biol
, vol.348
, Issue.3
, pp. 507-512
-
-
Punta, M.1
Rost, B.2
-
69
-
-
0020997912
-
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch, W.; Sander, C. Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers, 1983, 22 (12), 2577-2637.
-
(1983)
Biopolymers
, vol.22
, Issue.12
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
70
-
-
0033578684
-
Protein secondary structure prediction based on position-specific scoring matrices
-
Jones, D.T. Protein secondary structure prediction based on position-specific scoring matrices. J. Mol. Biol., 1999, 292 (2), 195-202.
-
(1999)
J. Mol. Biol
, vol.292
, Issue.2
, pp. 195-202
-
-
Jones, D.T.1
-
71
-
-
33646028225
-
Amino acid sequence predicts folding rate for middle-size two-state proteins
-
Huang, J.T.; Tian, J. Amino acid sequence predicts folding rate for middle-size two-state proteins. Proteins, 2006, 63 (3), 551-554.
-
(2006)
Proteins
, vol.63
, Issue.3
, pp. 551-554
-
-
Huang, J.T.1
Tian, J.2
-
72
-
-
33749035288
-
Direct correlation between proteins' folding rates and their amino acid compositions: An ab initio folding rate prediction
-
Ma, B.G.; Guo, J.X.; Zhang, H.Y. Direct correlation between proteins' folding rates and their amino acid compositions: an ab initio folding rate prediction. Proteins, 2006, 65 (2), 362-372.
-
(2006)
Proteins
, vol.65
, Issue.2
, pp. 362-372
-
-
Ma, B.G.1
Guo, J.X.2
Zhang, H.Y.3
-
73
-
-
80052237291
-
Intrinsic relationship of amino acid composition/occurrence with topological parameters and protein folding rates
-
Gromiha, M.M. Intrinsic relationship of amino acid composition/occurrence with topological parameters and protein folding rates. The Open Struct. Biol. J., 2009, 3, 126-132.
-
(2009)
The Open Struct. Biol. J
, vol.3
, pp. 126-132
-
-
Gromiha, M.M.1
-
74
-
-
69949110263
-
Prediction of protein folding rates from primary sequence by fusing multiple sequential features
-
Shen, H.B.; Song, J.N.; Chou, K.C. Prediction of protein folding rates from primary sequence by fusing multiple sequential features. J. Biomed. Sci. Eng., 2009, 2, 136-143.
-
(2009)
J. Biomed. Sci. Eng
, vol.2
, pp. 136-143
-
-
Shen, H.B.1
Song, J.N.2
Chou, K.C.3
-
75
-
-
70349613231
-
FoldRate: A web-server for predicting protein folding rates from primary sequence
-
Shen, H.B.; Chou, K.C. FoldRate: a web-server for predicting protein folding rates from primary sequence. The Open Bioinform. J., 2009, 3, 31-50.
-
(2009)
The Open Bioinform. J
, vol.3
, pp. 31-50
-
-
Shen, H.B.1
Chou, K.C.2
-
76
-
-
33846064578
-
A Protein Classification Benchmark collection for machine learning
-
(Database issue)
-
Sonego, P.; Pacurar, M.; Dhir, S.; Kertesz-Farkas, A.; Kocsor, A.; Gaspari, Z.; Leunissen, J.A.; Pongor, S. A Protein Classification Benchmark collection for machine learning. Nucleic Acids Res., 2007, 35 (Database issue), D232-D236.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Sonego, P.1
Pacurar, M.2
Dhir, S.3
Kertesz-Farkas, A.4
Kocsor, A.5
Gaspari, Z.6
Leunissen, J.A.7
Pongor, S.8
-
77
-
-
33646780174
-
Discrimination of outer membrane proteins using machine learning algorithms
-
Gromiha, M.M.; Suwa, M. Discrimination of outer membrane proteins using machine learning algorithms. Proteins, 2006, 63 (4), 1031-1037.
-
(2006)
Proteins
, vol.63
, Issue.4
, pp. 1031-1037
-
-
Gromiha, M.M.1
Suwa, M.2
-
78
-
-
39749148317
-
Discrimination of mesophilic and thermophilic proteins using machine learning algorithms
-
Gromiha, M.M.; Suresh, M.X. Discrimination of mesophilic and thermophilic proteins using machine learning algorithms. Proteins, 2008, 70 (4), 1274-1279.
-
(2008)
Proteins
, vol.70
, Issue.4
, pp. 1274-1279
-
-
Gromiha, M.M.1
Suresh, M.X.2
-
79
-
-
3042618109
-
Bayesian network multi-classifiers for protein secondary structure prediction
-
Robles, V.; Larranaga, P.; Pena, J.M.; Menasalvas, E.; Perez, M.S.; Herves, V.; Wasilewska, A. Bayesian network multi-classifiers for protein secondary structure prediction. Artif. Intell. Med., 2004, 31 (2), 117-136.
-
(2004)
Artif. Intell. Med
, vol.31
, Issue.2
, pp. 117-136
-
-
Robles, V.1
Larranaga, P.2
Pena, J.M.3
Menasalvas, E.4
Perez, M.S.5
Herves, V.6
Wasilewska, A.7
-
81
-
-
0023803244
-
Predicting the secondary structure of globular proteins using neural network models
-
Qian, N.; Sejnowski, T.J. Predicting the secondary structure of globular proteins using neural network models. J. Mol. Biol., 1988, 202 (4), 865-884.
-
(1988)
J. Mol. Biol
, vol.202
, Issue.4
, pp. 865-884
-
-
Qian, N.1
Sejnowski, T.J.2
-
82
-
-
1842688091
-
Neural network-based prediction of transmembrane beta-strand segments in outer membrane proteins
-
Gromiha, M.M.; Ahmad, S.; Suwa, M. Neural network-based prediction of transmembrane beta-strand segments in outer membrane proteins. J. Comput. Chem., 2004, 25 (5), 762-767.
-
(2004)
J. Comput. Chem
, vol.25
, Issue.5
, pp. 762-767
-
-
Gromiha, M.M.1
Ahmad, S.2
Suwa, M.3
-
83
-
-
0032117676
-
Using Model Trees for Classification
-
Frank, E.; Wang, Y.; Inglis, S.; Holmes, G.; Witten, I.H. Using Model Trees for Classification. Mach. Learn. 1998, 32 (1), 63-76.
-
(1998)
Mach. Learn
, vol.32
, Issue.1
, pp. 63-76
-
-
Frank, E.1
Wang, Y.2
Inglis, S.3
Holmes, G.4
Witten, I.H.5
-
85
-
-
0031211090
-
A decision-theoretic generalization of on-line learning and an application to boosting
-
Freund, Y.; Schapire, R.E. A decision-theoretic generalization of on-line learning and an application to boosting. J. Comput. Syst. Sci., 1997, 55 (1), 119-139.
-
(1997)
J. Comput. Syst. Sci
, vol.55
, Issue.1
, pp. 119-139
-
-
Freund, Y.1
Schapire, R.E.2
-
86
-
-
85052770793
-
-
Wadsworth International Group: Belmont, Calif
-
Breiman, L. Classification and regression trees. Wadsworth International Group: Belmont, Calif, 1984; p x, 358 p.
-
(1984)
Classification and Regression Trees
, pp. 358
-
-
Breiman, L.1
-
88
-
-
33747822326
-
FOLD-RATE: Prediction of protein folding rates from amino acid sequence
-
(Web Server issue)
-
Gromiha, M.M.; Thangakani, A.M.; Selvaraj, S. FOLD-RATE: prediction of protein folding rates from amino acid sequence. Nucleic Acids Res., 2006, 34 (Web Server issue), W70-4.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Gromiha, M.M.1
Thangakani, A.M.2
Selvaraj, S.3
-
89
-
-
46449092464
-
Analysis and prediction of protein folding rates using quadratic response surface models
-
Huang, L.T.; Gromiha, M.M. Analysis and prediction of protein folding rates using quadratic response surface models. J. Comput. Chem., 2008, 29 (10), 1675-1683.
-
(2008)
J. Comput. Chem
, vol.29
, Issue.10
, pp. 1675-1683
-
-
Huang, L.T.1
Gromiha, M.M.2
-
90
-
-
64549141572
-
Prediction of protein folding rates from primary sequences using hybrid sequence representation
-
Jiang, Y.; Iglinski, P.; Kurgan, L. Prediction of protein folding rates from primary sequences using hybrid sequence representation. J. Comput. Chem., 2009, 30 (5), 772-783.
-
(2009)
J. Comput. Chem
, vol.30
, Issue.5
, pp. 772-783
-
-
Jiang, Y.1
Iglinski, P.2
Kurgan, L.3
-
91
-
-
77953592974
-
Accurate prediction of protein folding rates from sequence and sequence-derived residue flexibility and solvent accessibility
-
Gao, J.; Zhang, T.; Zhang, H.; Shen, S.; Ruan, J.; Kurgan, L. Accurate prediction of protein folding rates from sequence and sequence-derived residue flexibility and solvent accessibility. Prot.: Struct., Funct., Bioinform., 2010.
-
(2010)
Prot.: Struct., Funct., Bioinform
-
-
Gao, J.1
Zhang, T.2
Zhang, H.3
Shen, S.4
Ruan, J.5
Kurgan, L.6
-
92
-
-
77952953441
-
Global and local prediction of protein folding rates based on sequence autocorrelation information
-
Xi, L.; Li, S.; Liu, H.; Li, J.; Lei, B.; Yao, X. Global and local prediction of protein folding rates based on sequence autocorrelation information. J. Theor. Biol., 2010.
-
(2010)
J. Theor. Biol
-
-
Xi, L.1
Li, S.2
Liu, H.3
Li, J.4
Lei, B.5
Yao, X.6
-
93
-
-
77955951200
-
First insight into the prediction of protein folding rate change upon point mutation
-
DOI: 10.1093/bioinformatics/btq350
-
Huang, L.-T.; Gromiha, M.M. First insight into the prediction of protein folding rate change upon point mutation. Bioinformatics, 2010, DOI: 10.1093/bioinformatics/btq350.
-
(2010)
Bioinformatics
-
-
Huang, L.-T.1
Gromiha, M.M.2
-
94
-
-
25844482592
-
Prediction of protein thermostability with a direction- and distance-dependent knowledge-based potential
-
Hoppe, C.; Schomburg, D. Prediction of protein thermostability with a direction- and distance-dependent knowledge-based potential. Prot. Sci., 2005, 14 (10), 2682-2692.
-
(2005)
Prot. Sci
, vol.14
, Issue.10
, pp. 2682-2692
-
-
Hoppe, C.1
Schomburg, D.2
-
95
-
-
37749052245
-
Prediction of protein stability upon point mutations
-
Gromiha, M.M. Prediction of protein stability upon point mutations. Biochem. Soc. Transac., 2007, 35 (Pt 6), 1569-1573.
-
(2007)
Biochem. Soc. Transac
, vol.35
, Issue.Pt 6
, pp. 1569-1573
-
-
Gromiha, M.M.1
-
96
-
-
33747838537
-
CUPSAT: Prediction of protein stability upon point mutations
-
(Web Server issue)
-
Parthiban, V.; Gromiha, M.M.; Schomburg, D. CUPSAT: prediction of protein stability upon point mutations. Nucleic Acids Res., 2006, 34 (Web Server issue), W239-W242.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Parthiban, V.1
Gromiha, M.M.2
Schomburg, D.3
-
97
-
-
33751311798
-
Knowledge acquisition and development of accurate rules for predicting protein stability changes
-
Huang, L.T.; Gromiha, M.M.; Hwang, S.F.; Ho, S.Y. Knowledge acquisition and development of accurate rules for predicting protein stability changes. Comput. Biol. Chem., 2006, 30 (6), 408-415.
-
(2006)
Comput. Biol. Chem
, vol.30
, Issue.6
, pp. 408-415
-
-
Huang, L.T.1
Gromiha, M.M.2
Hwang, S.F.3
Ho, S.Y.4
-
98
-
-
57049177027
-
Sequence Based Prediction of Protein Mutant Stability and Discrimination of Thermophilic Proteins
-
Gromiha, M.M.; Huang, L.T.; Lai, L.F. Sequence Based Prediction of Protein Mutant Stability and Discrimination of Thermophilic Proteins. Lecture Notes in Bioinform., 2008, 5265, 1-12.
-
(2008)
Lecture Notes In Bioinform
, vol.5265
, pp. 1-12
-
-
Gromiha, M.M.1
Huang, L.T.2
Lai, L.F.3
-
99
-
-
69949115157
-
Reliable prediction of protein thermostability change upon double mutation from amino acid sequence
-
Huang, L.T.; Gromiha, M.M. Reliable prediction of protein thermostability change upon double mutation from amino acid sequence. Bioinformatics, 2009, 25 (17), 2181-2187.
-
(2009)
Bioinformatics
, vol.25
, Issue.17
, pp. 2181-2187
-
-
Huang, L.T.1
Gromiha, M.M.2
-
100
-
-
77955590137
-
Human allelic variation: Perspective from protein function, structure, and evolution
-
Jordan, D.M.; Ramensky, V.E.; Sunyaev, S.R. Human allelic variation: perspective from protein function, structure, and evolution. Curr. Opin. Struct. Biol., 2010, 20 (3), 342-350.
-
(2010)
Curr. Opin. Struct. Biol
, vol.20
, Issue.3
, pp. 342-350
-
-
Jordan, D.M.1
Ramensky, V.E.2
Sunyaev, S.R.3
-
101
-
-
0035065485
-
SNPs, protein structure, and disease
-
Wang, Z.; Moult, J. SNPs, protein structure, and disease. Hum. Mutat. 2001, 17 (4), 263-270.
-
(2001)
Hum. Mutat
, vol.17
, Issue.4
, pp. 263-270
-
-
Wang, Z.1
Moult, J.2
-
102
-
-
25144523127
-
Loss of protein structure stability as a major causative factor in monogenic disease
-
Yue, P.; Li, Z.; Moult, J. Loss of protein structure stability as a major causative factor in monogenic disease. J. Mol. Biol., 2005, 353 (2), 459-473.
-
(2005)
J. Mol. Biol
, vol.353
, Issue.2
, pp. 459-473
-
-
Yue, P.1
Li, Z.2
Moult, J.3
-
103
-
-
70350668615
-
A survey of proteins encoded by non-synonymous single nucleotide polymorphisms reveals a significant fraction with altered stability and activity
-
Allali-Hassani, A.; Wasney, G.A.; Chau, I.; Hong, B.S.; Senisterra, G.; Loppnau, P.; Shi, Z.; Moult, J.; Edwards, A.M.; Arrowsmith, C.H.; Park, H.W.; Schapira, M.; Vedadi, M. A survey of proteins encoded by non-synonymous single nucleotide polymorphisms reveals a significant fraction with altered stability and activity. Biochem. J., 2009, 424 (1), 15-26.
-
(2009)
Biochem. J
, vol.424
, Issue.1
, pp. 15-26
-
-
Allali-Hassani, A.1
Wasney, G.A.2
Chau, I.3
Hong, B.S.4
Senisterra, G.5
Loppnau, P.6
Shi, Z.7
Moult, J.8
Edwards, A.M.9
Arrowsmith, C.H.10
Park, H.W.11
Schapira, M.12
Vedadi, M.13
-
104
-
-
74549207309
-
Assessing computational methods for predicting protein stability upon mutation: Good on average but not in the details
-
Potapov, V.; Cohen, M.; Schreiber, G. Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details. Prot. Eng. Des. Sel., 2009, 22 (9), 553-560.
-
(2009)
Prot. Eng. Des. Sel
, vol.22
, Issue.9
, pp. 553-560
-
-
Potapov, V.1
Cohen, M.2
Schreiber, G.3
-
105
-
-
77952706843
-
Performance of protein stability predictors
-
Khan, S.; Vihinen, M. Performance of protein stability predictors. Hum. Mutat., 2010, 31 (6), 675-684.
-
(2010)
Hum. Mutat
, vol.31
, Issue.6
, pp. 675-684
-
-
Khan, S.1
Vihinen, M.2
-
106
-
-
33847255036
-
K-Fold: A tool for the prediction of the protein folding kinetic order and rate
-
Capriotti, E.; Casadio, R. K-Fold: a tool for the prediction of the protein folding kinetic order and rate. Bioinformatics, 2007, 23 (3), 385-386.
-
(2007)
Bioinformatics
, vol.23
, Issue.3
, pp. 385-386
-
-
Capriotti, E.1
Casadio, R.2
-
107
-
-
78149280890
-
Human-readable rule generator for integrating amino acid sequence information and stability of mutant proteins
-
IEEE/ACM Transactions on 2010, DOI: 10.1109/TCBB.2008.128
-
Huang, L.-T.; Lai, L.-F.; Gromiha, M.M. Human-readable rule generator for integrating amino acid sequence information and stability of mutant proteins. Comput. Biol. Bioinform., IEEE/ACM Transactions on 2010, DOI: 10.1109/TCBB.2008.128.
-
Comput. Biol. Bioinform
-
-
Huang, L.-T.1
Lai, L.-F.2
Gromiha, M.M.3
-
108
-
-
79961018920
-
-
Proceedings of the 17th International Federation of Automatic Control World Congress, Seoul, Korea, July 6-11; International Federation of Automatic Control: Seoul, Korea
-
Grosfils, A.; Dehouck, Y.; Gilis, D.; Rooman, M.; Bogaerts, P. In Neural networks to predict protein stability changes upon mutation, Proceedings of the 17th International Federation of Automatic Control World Congress, Seoul, Korea, July 6-11; International Federation of Automatic Control: Seoul, Korea, 2008; pp 12619-12624.
-
(2008)
In Neural Networks to Predict Protein Stability Changes Upon Mutation
, pp. 12619-12624
-
-
Grosfils, A.1
Dehouck, Y.2
Gilis, D.3
Rooman, M.4
Bogaerts, P.5
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