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Volumn 12, Issue , 2011, Pages

Diverse and tissue-enriched small RNAs in the plant pathogenic fungus, Magnaporthe oryzae

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL RNA; RIBOSOME RNA; SMALL INTERFERING RNA; SMALL NUCLEAR RNA; SMALL RNA; TRANSCRIPTOME; TRANSFER RNA; UNCLASSIFIED DRUG; SMALL UNTRANSLATED RNA; SPACER DNA;

EID: 79960061199     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-12-288     Document Type: Article
Times cited : (103)

References (60)
  • 1
    • 0027751663 scopus 로고
    • The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
    • 10.1016/0092-8674(93)90529-Y, 8252621
    • Lee RC, Feinbaum RL, Ambros V. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 1993, 75(5):843-854. 10.1016/0092-8674(93)90529-Y, 8252621.
    • (1993) Cell , vol.75 , Issue.5 , pp. 843-854
    • Lee, R.C.1    Feinbaum, R.L.2    Ambros, V.3
  • 2
    • 24144494563 scopus 로고    scopus 로고
    • The let-7 microRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in Caenorhabditis elegans
    • 10.1016/j.devcel.2005.07.009, 16139228
    • Abbott AL, Alvarez-Saavedra E, Miska EA, Lau NC, Bartel DP, Horvitz HR, Ambros V. The let-7 microRNA family members mir-48, mir-84, and mir-241 function together to regulate developmental timing in Caenorhabditis elegans. Dev Cell 2005, 9:403-414. 10.1016/j.devcel.2005.07.009, 16139228.
    • (2005) Dev Cell , vol.9 , pp. 403-414
    • Abbott, A.L.1    Alvarez-Saavedra, E.2    Miska, E.A.3    Lau, N.C.4    Bartel, D.P.5    Horvitz, H.R.6    Ambros, V.7
  • 3
    • 59649104079 scopus 로고    scopus 로고
    • Bombyx small RNAs: Genomic defense system against transposons in the silkworm, Bombyx mori
    • 10.1016/j.ibmb.2008.03.007, 18801438
    • Kawaoka S, Hayashi N, Katsuma S, Kishino H, Kohara Y, Mita K, Shimada T. Bombyx small RNAs: Genomic defense system against transposons in the silkworm, Bombyx mori. Insect Biochem Mol Biol 2008, 38:1058-1065. 10.1016/j.ibmb.2008.03.007, 18801438.
    • (2008) Insect Biochem Mol Biol , vol.38 , pp. 1058-1065
    • Kawaoka, S.1    Hayashi, N.2    Katsuma, S.3    Kishino, H.4    Kohara, Y.5    Mita, K.6    Shimada, T.7
  • 4
    • 66149084316 scopus 로고    scopus 로고
    • QiRNA is a new type of small interfering RNA induced by DNA damage
    • 10.1038/nature08041, 2859615, 19444217
    • Lee HC, Chang SS, Choudhary S, Aalto AP, Maiti M, Bamford DH, Liu Y. qiRNA is a new type of small interfering RNA induced by DNA damage. Nature 2009, 459(7244):274-277. 10.1038/nature08041, 2859615, 19444217.
    • (2009) Nature , vol.459 , Issue.7244 , pp. 274-277
    • Lee, H.C.1    Chang, S.S.2    Choudhary, S.3    Aalto, A.P.4    Maiti, M.5    Bamford, D.H.6    Liu, Y.7
  • 5
    • 67651225588 scopus 로고    scopus 로고
    • Identification of small RNAs in Mycobacterium tuberculosis
    • 10.1111/j.1365-2958.2009.06777.x, 2764107, 19555452
    • Arnvig KB, Young DB. Identification of small RNAs in Mycobacterium tuberculosis. Mol Microbiol 2009, 73(3):397-408. 10.1111/j.1365-2958.2009.06777.x, 2764107, 19555452.
    • (2009) Mol Microbiol , vol.73 , Issue.3 , pp. 397-408
    • Arnvig, K.B.1    Young, D.B.2
  • 6
    • 58849112575 scopus 로고    scopus 로고
    • Biogenesis of small RNAs in animals
    • 10.1038/nrm2632, 19165215
    • Kim VN, Han J, Siomi MC. Biogenesis of small RNAs in animals. Nat Rev Mol Cell Biol 2009, 10(2):126-139. 10.1038/nrm2632, 19165215.
    • (2009) Nat Rev Mol Cell Biol , vol.10 , Issue.2 , pp. 126-139
    • Kim, V.N.1    Han, J.2    Siomi, M.C.3
  • 7
    • 58449134534 scopus 로고    scopus 로고
    • Small silencing RNAs: an expanding universe
    • 10.1038/nrg2504, 2724769, 19148191
    • Ghildiyal M, Zamore PD. Small silencing RNAs: an expanding universe. Nat Rev Genet 2009, 10(2):94-108. 10.1038/nrg2504, 2724769, 19148191.
    • (2009) Nat Rev Genet , vol.10 , Issue.2 , pp. 94-108
    • Ghildiyal, M.1    Zamore, P.D.2
  • 9
    • 43349083066 scopus 로고    scopus 로고
    • Small ncRNA transcriptome analysis from Aspergillus fumigatus suggests a novel mechanism for regulation of protein synthesis
    • 10.1093/nar/gkn123, 2377427, 18346967
    • Jöchl C, Rederstorff M, Hertel J, Stadler PF, Hofacker IL, Schrettl M, Haas H, Huttenhofer A. Small ncRNA transcriptome analysis from Aspergillus fumigatus suggests a novel mechanism for regulation of protein synthesis. Nucleic Acids Res 2008, 36(8):2677-2689. 10.1093/nar/gkn123, 2377427, 18346967.
    • (2008) Nucleic Acids Res , vol.36 , Issue.8 , pp. 2677-2689
    • Jöchl, C.1    Rederstorff, M.2    Hertel, J.3    Stadler, P.F.4    Hofacker, I.L.5    Schrettl, M.6    Haas, H.7    Huttenhofer, A.8
  • 11
    • 65249152479 scopus 로고    scopus 로고
    • The RNase Rny1p cleaves tRNAs and promotes cell death during oxidative stress in Saccharomyces cerevisiae
    • 10.1083/jcb.200811119, 2700514, 19332891
    • Thompson DM, Parker R. The RNase Rny1p cleaves tRNAs and promotes cell death during oxidative stress in Saccharomyces cerevisiae. J Cell Biol 2009, 185(1):43-50. 10.1083/jcb.200811119, 2700514, 19332891.
    • (2009) J Cell Biol , vol.185 , Issue.1 , pp. 43-50
    • Thompson, D.M.1    Parker, R.2
  • 12
    • 72749089855 scopus 로고    scopus 로고
    • A novel class of small RNAs: tRNA-derived RNA fragments (tRFs)
    • 10.1101/gad.1837609, 2779758, 19933153
    • Lee YS, Shibata Y, Malhotra A, Dutta A. A novel class of small RNAs: tRNA-derived RNA fragments (tRFs). Genes Dev 2009, 23(22):2639-2649. 10.1101/gad.1837609, 2779758, 19933153.
    • (2009) Genes Dev , vol.23 , Issue.22 , pp. 2639-2649
    • Lee, Y.S.1    Shibata, Y.2    Malhotra, A.3    Dutta, A.4
  • 13
    • 65249129859 scopus 로고    scopus 로고
    • Angiogenin cleaves tRNA and promotes stress-induced translational repression
    • 10.1083/jcb.200811106, 2700517, 19332886
    • Yamasaki S, Ivanov P, Hu GF, Anderson P. Angiogenin cleaves tRNA and promotes stress-induced translational repression. J Cell Biol 2009, 185(1):35-42. 10.1083/jcb.200811106, 2700517, 19332886.
    • (2009) J Cell Biol , vol.185 , Issue.1 , pp. 35-42
    • Yamasaki, S.1    Ivanov, P.2    Hu, G.F.3    Anderson, P.4
  • 15
    • 77956539978 scopus 로고    scopus 로고
    • Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides
    • 10.1093/nar/gkq301, 2938224, 20427422
    • Nicolas FE, Moxon S, de Haro JP, Calo S, Grigoriev IV, Torres-Martinez S, Moulton V, Ruiz-Vazquez RM, Dalmay T. Endogenous short RNAs generated by Dicer 2 and RNA-dependent RNA polymerase 1 regulate mRNAs in the basal fungus Mucor circinelloides. Nucleic Acids Res 2010, 38(16):5535-5541. 10.1093/nar/gkq301, 2938224, 20427422.
    • (2010) Nucleic Acids Res , vol.38 , Issue.16 , pp. 5535-5541
    • Nicolas, F.E.1    Moxon, S.2    de Haro, J.P.3    Calo, S.4    Grigoriev, I.V.5    Torres-Martinez, S.6    Moulton, V.7    Ruiz-Vazquez, R.M.8    Dalmay, T.9
  • 16
    • 0001159035 scopus 로고
    • Molecular genetic analysis of the rice blast fungus, Magnaporthe grisea
    • 10.1146/annurev.py.29.090191.002303, 18479196
    • Valent B, Chumley FG. Molecular genetic analysis of the rice blast fungus, Magnaporthe grisea. Annu Rev Phytopathol 1991, 29(1):443-467. 10.1146/annurev.py.29.090191.002303, 18479196.
    • (1991) Annu Rev Phytopathol , vol.29 , Issue.1 , pp. 443-467
    • Valent, B.1    Chumley, F.G.2
  • 18
    • 0242693135 scopus 로고    scopus 로고
    • On the trail of a cereal killer: exploring the biology of Magnaporthe grisea
    • 10.1146/annurev.micro.57.030502.090957, 14527276
    • Talbot NJ. On the trail of a cereal killer: exploring the biology of Magnaporthe grisea. Annu Rev Microbiol 2003, 57(1):177-202. 10.1146/annurev.micro.57.030502.090957, 14527276.
    • (2003) Annu Rev Microbiol , vol.57 , Issue.1 , pp. 177-202
    • Talbot, N.J.1
  • 19
    • 0030799254 scopus 로고    scopus 로고
    • Signal pathways and appressorium morphogenesis
    • 10.1146/annurev.phyto.35.1.211, 15012522
    • Dean R. Signal pathways and appressorium morphogenesis. Annu Rev Phytopathol 1997, 35:211-234. 10.1146/annurev.phyto.35.1.211, 15012522.
    • (1997) Annu Rev Phytopathol , vol.35 , pp. 211-234
    • Dean, R.1
  • 20
    • 47149114209 scopus 로고    scopus 로고
    • Transcriptome analysis reveals new insight into appressorium formation and function in the rice blast fungus Magnaporthe oryzae
    • 10.1186/gb-2008-9-5-r85, 2441471, 18492280
    • Oh Y, Donofrio N, Pan H, Coughlan S, Brown D, Meng S, Mitchell T, Dean R. Transcriptome analysis reveals new insight into appressorium formation and function in the rice blast fungus Magnaporthe oryzae. Genome Biol 2008, 9(5):R85. 10.1186/gb-2008-9-5-r85, 2441471, 18492280.
    • (2008) Genome Biol , vol.9 , Issue.5
    • Oh, Y.1    Donofrio, N.2    Pan, H.3    Coughlan, S.4    Brown, D.5    Meng, S.6    Mitchell, T.7    Dean, R.8
  • 22
    • 0000407930 scopus 로고
    • CAMP regulates infection structure formation in the plant-pathogenic fungus Magnaporthe grisea
    • 160306, 12271080
    • Lee Y, Dean R. cAMP regulates infection structure formation in the plant-pathogenic fungus Magnaporthe grisea. Plant Cell 1993, 5:693-700. 160306, 12271080.
    • (1993) Plant Cell , vol.5 , pp. 693-700
    • Lee, Y.1    Dean, R.2
  • 26
    • 35148848640 scopus 로고    scopus 로고
    • Magnaporthe as a model for understanding host-pathogen interactions
    • 10.1146/annurev.phyto.45.062806.094346, 17489691
    • Ebbole DJ. Magnaporthe as a model for understanding host-pathogen interactions. Annu Rev Phytopathol 2007, 45:437-456. 10.1146/annurev.phyto.45.062806.094346, 17489691.
    • (2007) Annu Rev Phytopathol , vol.45 , pp. 437-456
    • Ebbole, D.J.1
  • 28
    • 0043195647 scopus 로고    scopus 로고
    • RNA silencing in the phytopathogenic fungus Magnaporthe oryzae
    • 10.1094/MPMI.2003.16.9.769, 12971600
    • Kadotani N, Nakayashiki H, Tosa Y, Mayama S. RNA silencing in the phytopathogenic fungus Magnaporthe oryzae. Mol Plant Microbe Interact 2003, 16(9):769-776. 10.1094/MPMI.2003.16.9.769, 12971600.
    • (2003) Mol Plant Microbe Interact , vol.16 , Issue.9 , pp. 769-776
    • Kadotani, N.1    Nakayashiki, H.2    Tosa, Y.3    Mayama, S.4
  • 29
    • 7244226378 scopus 로고    scopus 로고
    • One of the two Dicer-like proteins in the filamentous fungi Magnaporthe oryzae genome is responsible for hairpin RNA-triggered RNA silencing and related small interfering RNA accumulation
    • 10.1074/jbc.M408259200, 15304480
    • Kadotani N, Nakayashiki H, Tosa Y, Mayama S. One of the two Dicer-like proteins in the filamentous fungi Magnaporthe oryzae genome is responsible for hairpin RNA-triggered RNA silencing and related small interfering RNA accumulation. J Biol Chem 2004, 279(43):44467-44474. 10.1074/jbc.M408259200, 15304480.
    • (2004) J Biol Chem , vol.279 , Issue.43 , pp. 44467-44474
    • Kadotani, N.1    Nakayashiki, H.2    Tosa, Y.3    Mayama, S.4
  • 30
    • 65849172363 scopus 로고    scopus 로고
    • Meta-analysis of small RNA-sequencing errors reveals ubiquitous post-transcriptional RNA modifications
    • 10.1093/nar/gkp093, 2677864, 19255090
    • Ebhardt HA, Tsang HH, Dai DC, Liu Y, Bostan B, Fahlman RP. Meta-analysis of small RNA-sequencing errors reveals ubiquitous post-transcriptional RNA modifications. Nucleic Acids Res 2009, 37(8):2461-2470. 10.1093/nar/gkp093, 2677864, 19255090.
    • (2009) Nucleic Acids Res , vol.37 , Issue.8 , pp. 2461-2470
    • Ebhardt, H.A.1    Tsang, H.H.2    Dai, D.C.3    Liu, Y.4    Bostan, B.5    Fahlman, R.P.6
  • 31
    • 33845436047 scopus 로고    scopus 로고
    • Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
    • 10.1016/j.cell.2006.10.040, 17174894
    • Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP. Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans. Cell 2006, 127(6):1193-1207. 10.1016/j.cell.2006.10.040, 17174894.
    • (2006) Cell , vol.127 , Issue.6 , pp. 1193-1207
    • Ruby, J.G.1    Jan, C.2    Player, C.3    Axtell, M.J.4    Lee, W.5    Nusbaum, C.6    Ge, H.7    Bartel, D.P.8
  • 32
    • 77950202393 scopus 로고    scopus 로고
    • Human tRNA-derived small RNAs in the global regulation of RNA silencing
    • 10.1261/rna.2000810, 2844617, 20181738
    • Haussecker D, Huang Y, Lau A, Parameswaran P, Fire AZ, Kay MA. Human tRNA-derived small RNAs in the global regulation of RNA silencing. RNA 2010, 16(4):673-695. 10.1261/rna.2000810, 2844617, 20181738.
    • (2010) RNA , vol.16 , Issue.4 , pp. 673-695
    • Haussecker, D.1    Huang, Y.2    Lau, A.3    Parameswaran, P.4    Fire, A.Z.5    Kay, M.A.6
  • 33
    • 77956458716 scopus 로고    scopus 로고
    • Transfer RNA modifications and genes for modifying enzymes in Arabidopsis thaliana
    • 10.1186/1471-2229-10-201, 2956550, 20836892
    • Chen P, Jager G, Zheng B. Transfer RNA modifications and genes for modifying enzymes in Arabidopsis thaliana. BMC Plant Biol 2010, 10:201. 10.1186/1471-2229-10-201, 2956550, 20836892.
    • (2010) BMC Plant Biol , vol.10 , pp. 201
    • Chen, P.1    Jager, G.2    Zheng, B.3
  • 34
    • 71849083574 scopus 로고    scopus 로고
    • Cellular dynamics of tRNAs and their genes
    • 10.1016/j.febslet.2009.11.053, 2818515, 19931532
    • Hopper AK, Pai DA, Engelke DR. Cellular dynamics of tRNAs and their genes. FEBS Lett 2010, 584(2):310-317. 10.1016/j.febslet.2009.11.053, 2818515, 19931532.
    • (2010) FEBS Lett , vol.584 , Issue.2 , pp. 310-317
    • Hopper, A.K.1    Pai, D.A.2    Engelke, D.R.3
  • 35
    • 27144493549 scopus 로고    scopus 로고
    • Transfer RNA modifications and modifying enzymes in Saccharomyces cerevisiae
    • Springer Berlin/Heidelberg: Topics in Current Genetics, Grosjean H
    • Johansson M, Byström A. Transfer RNA modifications and modifying enzymes in Saccharomyces cerevisiae. Fine-Tuning of RNA Functions by Modification and Editing 2005, 12:87-120. Springer Berlin/Heidelberg: Topics in Current Genetics, Grosjean H.
    • (2005) Fine-Tuning of RNA Functions by Modification and Editing , vol.12 , pp. 87-120
    • Johansson, M.1    Byström, A.2
  • 36
    • 29544450711 scopus 로고    scopus 로고
    • Rapid tRNA decay can result from lack of nonessential modifications
    • 10.1016/j.molcel.2005.10.036, 16387656
    • Alexandrov A, Chernyakov I, Gu W, Hiley SL, Hughes TR, Grayhack EJ, Phizicky EM. Rapid tRNA decay can result from lack of nonessential modifications. Mol Cell 2006, 21(1):87-96. 10.1016/j.molcel.2005.10.036, 16387656.
    • (2006) Mol Cell , vol.21 , Issue.1 , pp. 87-96
    • Alexandrov, A.1    Chernyakov, I.2    Gu, W.3    Hiley, S.L.4    Hughes, T.R.5    Grayhack, E.J.6    Phizicky, E.M.7
  • 37
    • 66149185406 scopus 로고    scopus 로고
    • Interaction transcriptome analysis identifies Magnaporthe oryzae BAS1-4 as biotrophy-associated secreted proteins in rice blast disease
    • 10.1105/tpc.107.055228, 2685627, 19357089
    • Mosquera G, Giraldo MC, Khang CH, Coughlan S, Valent B. Interaction transcriptome analysis identifies Magnaporthe oryzae BAS1-4 as biotrophy-associated secreted proteins in rice blast disease. Plant Cell 2009, 21(4):1273-1290. 10.1105/tpc.107.055228, 2685627, 19357089.
    • (2009) Plant Cell , vol.21 , Issue.4 , pp. 1273-1290
    • Mosquera, G.1    Giraldo, M.C.2    Khang, C.H.3    Coughlan, S.4    Valent, B.5
  • 38
    • 33746846959 scopus 로고    scopus 로고
    • Global gene expression during nitrogen starvation in the rice blast fungus, Magnaporthe grisea
    • 10.1016/j.fgb.2006.03.005, 16731015
    • Donofrio NM, Oh Y, Lundy R, Pan H, Brown DE, Jeong JS, Coughlan S, Mitchell TK, Dean RA. Global gene expression during nitrogen starvation in the rice blast fungus, Magnaporthe grisea. Fungal Genet Biol 2006, 43(9):605-617. 10.1016/j.fgb.2006.03.005, 16731015.
    • (2006) Fungal Genet Biol , vol.43 , Issue.9 , pp. 605-617
    • Donofrio, N.M.1    Oh, Y.2    Lundy, R.3    Pan, H.4    Brown, D.E.5    Jeong, J.S.6    Coughlan, S.7    Mitchell, T.K.8    Dean, R.A.9
  • 40
    • 56949099196 scopus 로고    scopus 로고
    • RNA interference: roles in fungal biology
    • 10.1016/j.mib.2008.10.001, 18955156
    • Nakayashiki H, Nguyen QB. RNA interference: roles in fungal biology. Curr Opin Microbiol 2008, 11(6):494-502. 10.1016/j.mib.2008.10.001, 18955156.
    • (2008) Curr Opin Microbiol , vol.11 , Issue.6 , pp. 494-502
    • Nakayashiki, H.1    Nguyen, Q.B.2
  • 42
    • 33745033975 scopus 로고    scopus 로고
    • The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae
    • 10.1186/gb-2006-7-2-r16, 1431731, 16507177
    • Thon MR, Pan H, Diener S, Papalas J, Taro A, Mitchell TK, Dean RA. The role of transposable element clusters in genome evolution and loss of synteny in the rice blast fungus Magnaporthe oryzae. Genome Biol 2006, 7(2):R16. 10.1186/gb-2006-7-2-r16, 1431731, 16507177.
    • (2006) Genome Biol , vol.7 , Issue.2
    • Thon, M.R.1    Pan, H.2    Diener, S.3    Papalas, J.4    Taro, A.5    Mitchell, T.K.6    Dean, R.A.7
  • 43
    • 0035059327 scopus 로고    scopus 로고
    • Gain of virulence caused by insertion of a Pot3 transposon in a Magnaporthe grisea avirulence gene
    • 10.1094/MPMI.2001.14.5.671, 11332731
    • Kang S, Lebrun MH, Farrall L, Valent B. Gain of virulence caused by insertion of a Pot3 transposon in a Magnaporthe grisea avirulence gene. Mol Plant Microbe Interact 2001, 14(5):671-674. 10.1094/MPMI.2001.14.5.671, 11332731.
    • (2001) Mol Plant Microbe Interact , vol.14 , Issue.5 , pp. 671-674
    • Kang, S.1    Lebrun, M.H.2    Farrall, L.3    Valent, B.4
  • 44
    • 23944491177 scopus 로고    scopus 로고
    • Transposition of MINE, a composite retrotransposon, in the avirulence gene ACE1 of the rice blast fungus Magnaporthe grisea
    • 10.1016/j.fgb.2005.05.001, 15978851
    • Fudal I, Bohnert HU, Tharreau D, Lebrun MH. Transposition of MINE, a composite retrotransposon, in the avirulence gene ACE1 of the rice blast fungus Magnaporthe grisea. Fungal Genet Biol 2005, 42(9):761-772. 10.1016/j.fgb.2005.05.001, 15978851.
    • (2005) Fungal Genet Biol , vol.42 , Issue.9 , pp. 761-772
    • Fudal, I.1    Bohnert, H.U.2    Tharreau, D.3    Lebrun, M.H.4
  • 45
    • 0034525256 scopus 로고    scopus 로고
    • A telomeric avirulence gene determines efficacy for the rice blast resistance gene Pi-ta
    • 152363, 11090206
    • Orbach MJ, Farrall L, Sweigard JA, Chumley FG, Valent B. A telomeric avirulence gene determines efficacy for the rice blast resistance gene Pi-ta. Plant Cell 2000, 12(11):2019-2032. 152363, 11090206.
    • (2000) Plant Cell , vol.12 , Issue.11 , pp. 2019-2032
    • Orbach, M.J.1    Farrall, L.2    Sweigard, J.A.3    Chumley, F.G.4    Valent, B.5
  • 46
    • 0037009520 scopus 로고    scopus 로고
    • Two classes of short interfering RNA in RNA silencing
    • 10.1093/emboj/cdf464, 125409, 12198169
    • Hamilton A, Voinnet O, Chappell L, Baulcombe D. Two classes of short interfering RNA in RNA silencing. EMBO J 2002, 21(17):4671-4679. 10.1093/emboj/cdf464, 125409, 12198169.
    • (2002) EMBO J , vol.21 , Issue.17 , pp. 4671-4679
    • Hamilton, A.1    Voinnet, O.2    Chappell, L.3    Baulcombe, D.4
  • 47
    • 44449096738 scopus 로고    scopus 로고
    • Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells
    • 10.1126/science.1157396, 2953241, 18403677
    • Ghildiyal M, Seitz H, Horwich MD, Li C, Du T, Lee S, Xu J, Kittler EL, Zapp ML, Weng Z, Zamore PD. Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells. Science 2008, 320(5879):1077-1081. 10.1126/science.1157396, 2953241, 18403677.
    • (2008) Science , vol.320 , Issue.5879 , pp. 1077-1081
    • Ghildiyal, M.1    Seitz, H.2    Horwich, M.D.3    Li, C.4    Du, T.5    Lee, S.6    Xu, J.7    Kittler, E.L.8    Zapp, M.L.9    Weng, Z.10    Zamore, P.D.11
  • 48
    • 33748363713 scopus 로고    scopus 로고
    • L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells
    • 10.1038/nsmb1141, 16936727
    • Yang N, Kazazian HH. L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells. Nat Struct Mol Biol 2006, 13(9):763-771. 10.1038/nsmb1141, 16936727.
    • (2006) Nat Struct Mol Biol , vol.13 , Issue.9 , pp. 763-771
    • Yang, N.1    Kazazian, H.H.2
  • 49
    • 77956172367 scopus 로고    scopus 로고
    • PiRNA-mediated silencing in Drosophila germlines
    • 10.1016/j.semcdb.2010.01.011, 20080197
    • Siomi MC, Miyoshi T, Siomi H. piRNA-mediated silencing in Drosophila germlines. Semin Cell Dev Biol 2010, 21(7):754-759. 10.1016/j.semcdb.2010.01.011, 20080197.
    • (2010) Semin Cell Dev Biol , vol.21 , Issue.7 , pp. 754-759
    • Siomi, M.C.1    Miyoshi, T.2    Siomi, H.3
  • 50
    • 0034798845 scopus 로고    scopus 로고
    • Heat shock, copper sulfate and oxidative stress activate the retrotransposon MAGGY resident in the plant pathogenic fungus Magnaporthe grisea
    • 10.1007/s004380100560, 11683275
    • Ikeda K, Nakayashiki H, Takagi M, Tosa Y, Mayama S. Heat shock, copper sulfate and oxidative stress activate the retrotransposon MAGGY resident in the plant pathogenic fungus Magnaporthe grisea. Mol Genet Genomics 2001, 266(2):318-325. 10.1007/s004380100560, 11683275.
    • (2001) Mol Genet Genomics , vol.266 , Issue.2 , pp. 318-325
    • Ikeda, K.1    Nakayashiki, H.2    Takagi, M.3    Tosa, Y.4    Mayama, S.5
  • 51
    • 35549002756 scopus 로고    scopus 로고
    • SiRNA-dependent and -independent post-transcriptional cosuppression of the LTR-retrotransposon MAGGY in the phytopathogenic fungus Magnaporthe oryzae
    • 10.1093/nar/gkm646, 2094067, 17726046
    • Murata T, Kadotani N, Yamaguchi M, Tosa Y, Mayama S, Nakayashiki H. siRNA-dependent and -independent post-transcriptional cosuppression of the LTR-retrotransposon MAGGY in the phytopathogenic fungus Magnaporthe oryzae. Nucleic Acids Res 2007, 35(18):5987-5994. 10.1093/nar/gkm646, 2094067, 17726046.
    • (2007) Nucleic Acids Res , vol.35 , Issue.18 , pp. 5987-5994
    • Murata, T.1    Kadotani, N.2    Yamaguchi, M.3    Tosa, Y.4    Mayama, S.5    Nakayashiki, H.6
  • 52
    • 52949145277 scopus 로고    scopus 로고
    • TRNA cleavage is a conserved response to oxidative stress in eukaryotes
    • 10.1261/rna.1232808, 2553748, 18719243
    • Thompson DM, Lu C, Green PJ, Parker R. tRNA cleavage is a conserved response to oxidative stress in eukaryotes. RNA 2008, 14(10):2095-2103. 10.1261/rna.1232808, 2553748, 18719243.
    • (2008) RNA , vol.14 , Issue.10 , pp. 2095-2103
    • Thompson, D.M.1    Lu, C.2    Green, P.J.3    Parker, R.4
  • 53
    • 39449095457 scopus 로고    scopus 로고
    • Developmentally regulated cleavage of tRNAs in the bacterium Streptomyces coelicolor
    • 2241913, 18084030
    • Haiser HJ, Karginov FV, Hannon GJ, Elliot MA. Developmentally regulated cleavage of tRNAs in the bacterium Streptomyces coelicolor. Nucleic Acids Res 2008, 36(3):732-741. 2241913, 18084030.
    • (2008) Nucleic Acids Res , vol.36 , Issue.3 , pp. 732-741
    • Haiser, H.J.1    Karginov, F.V.2    Hannon, G.J.3    Elliot, M.A.4
  • 54
    • 56049119367 scopus 로고    scopus 로고
    • Stress-induced tRNA-derived RNAs: a novel class of small RNAs in the primitive eukaryote Giardia lamblia
    • 10.1093/nar/gkn596, 2577346, 18820301
    • Li Y, Luo J, Zhou H, Liao JY, Ma LM, Chen YQ, Qu LH. Stress-induced tRNA-derived RNAs: a novel class of small RNAs in the primitive eukaryote Giardia lamblia. Nucleic Acids Res 2008, 36(19):6048-6055. 10.1093/nar/gkn596, 2577346, 18820301.
    • (2008) Nucleic Acids Res , vol.36 , Issue.19 , pp. 6048-6055
    • Li, Y.1    Luo, J.2    Zhou, H.3    Liao, J.Y.4    Ma, L.M.5    Chen, Y.Q.6    Qu, L.H.7
  • 55
    • 77955884641 scopus 로고    scopus 로고
    • RNA methylation by Dnmt2 protects transfer RNAs against stress-induced cleavage
    • 10.1101/gad.586710, 2912555, 20679393
    • Schaefer M, Pollex T, Hanna K, Tuorto F, Meusburger M, Helm M, Lyko F. RNA methylation by Dnmt2 protects transfer RNAs against stress-induced cleavage. Genes Dev 2010, 24(15):1590-1595. 10.1101/gad.586710, 2912555, 20679393.
    • (2010) Genes Dev , vol.24 , Issue.15 , pp. 1590-1595
    • Schaefer, M.1    Pollex, T.2    Hanna, K.3    Tuorto, F.4    Meusburger, M.5    Helm, M.6    Lyko, F.7
  • 56
    • 77950373297 scopus 로고    scopus 로고
    • In vivo trans-specific gene silencing in fungal cells by in planta expression of a double-stranded RNA
    • 10.1186/1741-7007-8-27, 2907587, 20356372
    • Tinoco ML, Dias BB, Dall'Astta RC, Pamphile JA, Aragão FJ. In vivo trans-specific gene silencing in fungal cells by in planta expression of a double-stranded RNA. BMC Biol 2010, 8:27. 10.1186/1741-7007-8-27, 2907587, 20356372.
    • (2010) BMC Biol , vol.8 , pp. 27
    • Tinoco, M.L.1    Dias, B.B.2    Dall'Astta, R.C.3    Pamphile, J.A.4    Aragão, F.J.5
  • 57
    • 34447104264 scopus 로고    scopus 로고
    • Robust analysis of 5'-transcript ends: a high-throughput protocol for characterization of sequence diversity of transcription start sites
    • 10.1038/nprot.2007.242, 17585303
    • Gowda M, Li H, Wang GL. Robust analysis of 5'-transcript ends: a high-throughput protocol for characterization of sequence diversity of transcription start sites. Nat Protoc 2007, 2(7):1622-1632. 10.1038/nprot.2007.242, 17585303.
    • (2007) Nat Protoc , vol.2 , Issue.7 , pp. 1622-1632
    • Gowda, M.1    Li, H.2    Wang, G.L.3
  • 58
    • 34548687914 scopus 로고    scopus 로고
    • Construction of small RNA cDNA libraries for deep sequencing
    • 10.1016/j.ymeth.2007.05.002, 17889797
    • Lu C, Meyers BC, Green PJ. Construction of small RNA cDNA libraries for deep sequencing. Methods 2007, 43(2):110-117. 10.1016/j.ymeth.2007.05.002, 17889797.
    • (2007) Methods , vol.43 , Issue.2 , pp. 110-117
    • Lu, C.1    Meyers, B.C.2    Green, P.J.3
  • 60
    • 2142738304 scopus 로고    scopus 로고
    • WebLogo: a sequence logo generator
    • 10.1101/gr.849004, 419797, 15173120
    • Crooks GE, Hon G, Chandonia JM, Brenner SE. WebLogo: a sequence logo generator. Genome Res 2004, 14(6):1188-1190. 10.1101/gr.849004, 419797, 15173120.
    • (2004) Genome Res , vol.14 , Issue.6 , pp. 1188-1190
    • Crooks, G.E.1    Hon, G.2    Chandonia, J.M.3    Brenner, S.E.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.