-
1
-
-
77953635299
-
Biochemical principles of small RNA pathways
-
Liu Q, Paroo Z, (2010) Biochemical principles of small RNA pathways. Annu Rev Biochem 79: 295-319.
-
(2010)
Annu Rev Biochem
, vol.79
, pp. 295-319
-
-
Liu, Q.1
Paroo, Z.2
-
2
-
-
0038307857
-
400000 Nematode ESTs on the net
-
Parkinson J, Mitreva M, Hall N, Blaxter M, McCarter JP, (2003) 400000 Nematode ESTs on the net. Trends Parasitol 19: 283-286.
-
(2003)
Trends Parasitol
, vol.19
, pp. 283-286
-
-
Parkinson, J.1
Mitreva, M.2
Hall, N.3
Blaxter, M.4
McCarter, J.P.5
-
3
-
-
34648836102
-
Draft genome of the filarial nematode parasite Brugia malayi
-
Ghedin E, Wang S, Spiro D, Caler E, Zhao Q, et al. (2007) Draft genome of the filarial nematode parasite Brugia malayi. Science 317: 1756-1760.
-
(2007)
Science
, vol.317
, pp. 1756-1760
-
-
Ghedin, E.1
Wang, S.2
Spiro, D.3
Caler, E.4
Zhao, Q.5
-
4
-
-
54149092490
-
Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism
-
Opperman CH, Bird DM, Williamson VM, Rokhsar DS, Burke M, et al. (2008) Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism. Proc Natl Acad Sci USA 105: 14802-14807.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 14802-14807
-
-
Opperman, C.H.1
Bird, D.M.2
Williamson, V.M.3
Rokhsar, D.S.4
Burke, M.5
-
5
-
-
49449094873
-
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita
-
Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EG, et al. (2008) Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nat Biotechnol 26: 909-915.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 909-915
-
-
Abad, P.1
Gouzy, J.2
Aury, J.M.3
Castagnone-Sereno, P.4
Danchin, E.G.5
-
6
-
-
0036679383
-
Ingestion of double-stranded RNA by pre-parasitic juvenile cyst nematodes leads to RNA interference
-
Urwin PE, Lilley CJ, Atkinson HJ, (2002) Ingestion of double-stranded RNA by pre-parasitic juvenile cyst nematodes leads to RNA interference. Mol Plant Microbe Interact 15: 747-752.
-
(2002)
Mol Plant Microbe Interact
, vol.15
, pp. 747-752
-
-
Urwin, P.E.1
Lilley, C.J.2
Atkinson, H.J.3
-
7
-
-
33947621535
-
Flp gene disruption in a parasitic nematode reveals motor dysfunction and unusual neuronal sensitivity to RNA interference
-
Kimber MJ, McKinney S, McMaster S, Day TA, Fleming CC, et al. (2007) Flp gene disruption in a parasitic nematode reveals motor dysfunction and unusual neuronal sensitivity to RNA interference. FASEB J 21: 1233-1243.
-
(2007)
FASEB J
, vol.21
, pp. 1233-1243
-
-
Kimber, M.J.1
McKinney, S.2
McMaster, S.3
Day, T.A.4
Fleming, C.C.5
-
8
-
-
72049114970
-
Short interfering RNA-mediated gene silencing in Globodera pallida and Meloidogyne incognita infective stage juveniles
-
Dalzell JJ, McMaster S, Fleming CC, Maule AG, (2010) Short interfering RNA-mediated gene silencing in Globodera pallida and Meloidogyne incognita infective stage juveniles. Int J Parasitol 40: 91-100.
-
(2010)
Int J Parasitol
, vol.40
, pp. 91-100
-
-
Dalzell, J.J.1
McMaster, S.2
Fleming, C.C.3
Maule, A.G.4
-
9
-
-
33749239238
-
Engineering broad root-knot resistance in transgenic plants by RNAi silencing of a conserved and essential root-knot nematode parasitism gene
-
Huang G, Allen R, Davis EL, Baum TJ, Hussey RS, (2006) Engineering broad root-knot resistance in transgenic plants by RNAi silencing of a conserved and essential root-knot nematode parasitism gene. Proc Natl Acad Sci USA 103: 14301-14306.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 14301-14306
-
-
Huang, G.1
Allen, R.2
Davis, E.L.3
Baum, T.J.4
Hussey, R.S.5
-
10
-
-
33745365559
-
Host-generated double stranded RNA induces RNAi in plant-parasitic nematodes and protects the host from infection
-
Yadav BC, Veluthambi K, Subramaniam K, (2006) Host-generated double stranded RNA induces RNAi in plant-parasitic nematodes and protects the host from infection. Mol Biochem Parasitol 148: 219-222.
-
(2006)
Mol Biochem Parasitol
, vol.148
, pp. 219-222
-
-
Yadav, B.C.1
Veluthambi, K.2
Subramaniam, K.3
-
11
-
-
34249708427
-
RNA interference in parasitic helminths: Current situation, potential pitfalls and future prospects
-
Geldhof P, Visser A, Clark D, Saunders G, Britton C, et al. (2007) RNA interference in parasitic helminths: Current situation, potential pitfalls and future prospects. Parasitology 134: 609-619.
-
(2007)
Parasitology
, vol.134
, pp. 609-619
-
-
Geldhof, P.1
Visser, A.2
Clark, D.3
Saunders, G.4
Britton, C.5
-
12
-
-
33847310222
-
RNA interference in parasitic nematodes of animals: A reality check?
-
Knox DP, Geldhof P, Visser A, Britton C, (2007) RNA interference in parasitic nematodes of animals: A reality check? Trends Parasitol 23: 105-107.
-
(2007)
Trends Parasitol
, vol.23
, pp. 105-107
-
-
Knox, D.P.1
Geldhof, P.2
Visser, A.3
Britton, C.4
-
13
-
-
37048998934
-
Two hypotheses to explain why RNA interference does not work in animal parasitic nematodes
-
Viney ME, Thompson FJ, (2008) Two hypotheses to explain why RNA interference does not work in animal parasitic nematodes. Int J Parasitol 38: 43-47.
-
(2008)
Int J Parasitol
, vol.38
, pp. 43-47
-
-
Viney, M.E.1
Thompson, F.J.2
-
14
-
-
33751083829
-
Efficacy and specificity of RNA interference in larval life-stages of Ostertagia ostertagi
-
Visser A, Geldhof P, deMaere V, Knox DP, Vercruysse J, et al. (2006) Efficacy and specificity of RNA interference in larval life-stages of Ostertagia ostertagi. Parasitology 133: 777-783.
-
(2006)
Parasitology
, vol.133
, pp. 777-783
-
-
Visser, A.1
Geldhof, P.2
de Maere, V.3
Knox, D.P.4
Vercruysse, J.5
-
15
-
-
33745009743
-
Testing the efficacy of RNA interference in Haemonchus contortus
-
Geldhof P, Murray L, Couthier A, Gilleard JS, McLauchlan G, et al. (2006) Testing the efficacy of RNA interference in Haemonchus contortus. Int J Parasitol 36: 801-810.
-
(2006)
Int J Parasitol
, vol.36
, pp. 801-810
-
-
Geldhof, P.1
Murray, L.2
Couthier, A.3
Gilleard, J.S.4
McLauchlan, G.5
-
16
-
-
78650179159
-
Factors affecting susceptibility to RNA interference in Haemonchus contortus and in vivo silencing of an H11 aminopeptidase gene
-
Samarasinghe B, Knox DP, Britton C, (2010) Factors affecting susceptibility to RNA interference in Haemonchus contortus and in vivo silencing of an H11 aminopeptidase gene. Int J Parasitol 41: 51-59.
-
(2010)
Int J Parasitol
, vol.41
, pp. 51-59
-
-
Samarasinghe, B.1
Knox, D.P.2
Britton, C.3
-
17
-
-
47949125222
-
Attempts to establish RNA interference in the parasitic nematode Heligmosomoides polygyrus
-
Lendner M, Doligalska M, Lucius R, Hartmann S, (2008) Attempts to establish RNA interference in the parasitic nematode Heligmosomoides polygyrus. Mol Biochem Parasitol 161: 21-31.
-
(2008)
Mol Biochem Parasitol
, vol.161
, pp. 21-31
-
-
Lendner, M.1
Doligalska, M.2
Lucius, R.3
Hartmann, S.4
-
18
-
-
0037274671
-
Control of vulval competence and centering in the nematode Oscheius sp. 1 CEW1
-
Louvet-Vallee S, Kolotuev I, Podbilewicz B, Felix MA, (2003) Control of vulval competence and centering in the nematode Oscheius sp. 1 CEW1. Genetics 163: 133-146.
-
(2003)
Genetics
, vol.163
, pp. 133-146
-
-
Louvet-Vallee, S.1
Kolotuev, I.2
Podbilewicz, B.3
Felix, M.A.4
-
19
-
-
2442639062
-
Conservation of the global sex determination gene tra-1 in distantly related nematodes
-
Pires da Silva A, Sommer RJ, (2004) Conservation of the global sex determination gene tra-1 in distantly related nematodes. Gene Dev 18: 1198-1208.
-
(2004)
Gene Dev
, vol.18
, pp. 1198-1208
-
-
da Pires Silva, A.1
Sommer, R.J.2
-
20
-
-
79954592991
-
Pristionchus pacificus genetic protocols
-
WormBook, ed, doi/10.1895/wormbook.1.114.1
-
Pires da Silva A, WormBook, ed (2006) Pristionchus pacificus genetic protocols. The C. elegans Research Community, WormBook doi/10.1895/wormbook.1.114.1.
-
(2006)
The C. Elegans Research Community, WormBook
-
-
da Pires Silva, A.1
-
21
-
-
34547525675
-
Caenorhabditis elegans SID-2 is required for environmental RNA interference
-
Winston WM, Sutherlin M, Wright AJ, Feinberg EH, Hunter CP, (2007) Caenorhabditis elegans SID-2 is required for environmental RNA interference. Proc Natl Acad Sci USA 104: 10565-10570.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 10565-10570
-
-
Winston, W.M.1
Sutherlin, M.2
Wright, A.J.3
Feinberg, E.H.4
Hunter, C.P.5
-
22
-
-
0041927746
-
RNAi in protozoan parasites: What hope for the apicomplexa?
-
Blackman MJ, (2003) RNAi in protozoan parasites: What hope for the apicomplexa? Protist 154: 177-180.
-
(2003)
Protist
, vol.154
, pp. 177-180
-
-
Blackman, M.J.1
-
23
-
-
33646826325
-
Toward silencing the burden of malaria: Progress and prospects for RNAi-based approaches
-
Brown AE, Catteruccia F, (2006) Toward silencing the burden of malaria: Progress and prospects for RNAi-based approaches. BioTechniques Apr (Suppl): 38-44.
-
(2006)
BioTechniques Apr
, Issue.SUPPL.
, pp. 38-44
-
-
Brown, A.E.1
Catteruccia, F.2
-
24
-
-
67649882048
-
Molecular genetics and comparative genomics reveal RNAi is not functional in malaria parasites
-
Baum J, Papenfuss AT, Mair GR, Janse CJ, Vlachou D, et al. (2009) Molecular genetics and comparative genomics reveal RNAi is not functional in malaria parasites. Nucleic Acids Res 37: 3788-3798.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 3788-3798
-
-
Baum, J.1
Papenfuss, A.T.2
Mair, G.R.3
Janse, C.J.4
Vlachou, D.5
-
25
-
-
0032485270
-
A molecular evolutionary framework for the phylum Nematoda
-
Blaxter ML, De Ley P, Garey JR, Liu LX, Scheldeman P, et al. (1998) A molecular evolutionary framework for the phylum Nematoda. Nature 392: 71-75.
-
(1998)
Nature
, vol.392
, pp. 71-75
-
-
Blaxter, M.L.1
De Ley, P.2
Garey, J.R.3
Liu, L.X.4
Scheldeman, P.5
-
26
-
-
33748158280
-
Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown Clades
-
Holterman M, van der Wurff A, van den Elsen S, van Megen H, Bongers T, et al. (2006) Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown Clades. Mol Biol Evol 23: 1792-1800.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 1792-1800
-
-
Holterman, M.1
van der Wurff, A.2
van den Elsen, S.3
van Megen, H.4
Bongers, T.5
-
27
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ, (1990) Basic local alignment search tool. J Mol Biol 215: 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
28
-
-
77957348372
-
Proteomic and bioinformatic analysis of the root-knot nematode Meloidogyne hapla: The basis for plant parasitism
-
Mbeunkui F, Scholl EH, Opperman CH, Goshe MB, Bird DMcK, (2010) Proteomic and bioinformatic analysis of the root-knot nematode Meloidogyne hapla: The basis for plant parasitism. J Proteome Res 9: 5370-5381.
-
(2010)
J Proteome Res
, vol.9
, pp. 5370-5381
-
-
Mbeunkui, F.1
Scholl, E.H.2
Opperman, C.H.3
Goshe, M.B.4
Bird, D.M.C.K.5
-
29
-
-
58149191260
-
Nematode.net update 2008: improvements enabling more efficient data mining and comparative nematode genomics
-
Martin J, Abubucker S, Wylie T, Yin Y, Wang Z, et al. (2009) Nematode.net update 2008: improvements enabling more efficient data mining and comparative nematode genomics. Nucleic Acids Res 37: D571-578.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 571-578
-
-
Martin, J.1
Abubucker, S.2
Wylie, T.3
Yin, Y.4
Wang, Z.5
-
30
-
-
58549121169
-
Assessing the gene space in draft genomes
-
Parra G, Bradnam K, Ning Z, Keane T, Korf I, (2008) Assessing the gene space in draft genomes. Nucleic Acids Res 37: 289-297.
-
(2008)
Nucleic Acids Res
, vol.37
, pp. 289-297
-
-
Parra, G.1
Bradnam, K.2
Ning, Z.3
Keane, T.4
Korf, I.5
-
31
-
-
77952058969
-
Characterising Ancylostoma caninum transcriptome and exploring nematode parasitic adaptation
-
Wang Z, Abubucker S, Martin J, Wilson RK, Hawdon J, et al. (2010) Characterising Ancylostoma caninum transcriptome and exploring nematode parasitic adaptation. BMC Genomics 11: 307.
-
(2010)
BMC Genomics
, vol.11
, pp. 307
-
-
Wang, Z.1
Abubucker, S.2
Martin, J.3
Wilson, R.K.4
Hawdon, J.5
-
32
-
-
33750824034
-
Analysis of the C. elegans argonaute family reveals that distinct argonautes act sequentially during RNAi
-
Yigit E, (2006) Analysis of the C. elegans argonaute family reveals that distinct argonautes act sequentially during RNAi. Cell 127: 747-757.
-
(2006)
Cell
, vol.127
, pp. 747-757
-
-
Yigit, E.1
-
33
-
-
0037192490
-
Systemic RNAi in C. elegans requires the putative transmembrane protein SID-1
-
Winston WM, Molodowitch C, Hunter CP, (2002) Systemic RNAi in C. elegans requires the putative transmembrane protein SID-1. Science 295: 2456-2459.
-
(2002)
Science
, vol.295
, pp. 2456-2459
-
-
Winston, W.M.1
Molodowitch, C.2
Hunter, C.P.3
-
34
-
-
18044388731
-
RNA interference: A mammalian SID-1 homologue enhances siRNA uptake and gene silencing efficacy in human cells
-
Duxbury MS, Ashley SW, Whang EE, (2005) RNA interference: A mammalian SID-1 homologue enhances siRNA uptake and gene silencing efficacy in human cells. Biochem Biophys Res Commun 331: 459-463.
-
(2005)
Biochem Biophys Res Commun
, vol.331
, pp. 459-463
-
-
Duxbury, M.S.1
Ashley, S.W.2
Whang, E.E.3
-
35
-
-
77949657191
-
RNA interference in schistosomes: Machinery and methodology
-
Krautz-Peterson G, Bhardwaj R, Faghiri Z, Tararam CA, Skelly PJ, (2010) RNA interference in schistosomes: Machinery and methodology. Parasitology 137: 485-495.
-
(2010)
Parasitology
, vol.137
, pp. 485-495
-
-
Krautz-Peterson, G.1
Bhardwaj, R.2
Faghiri, Z.3
Tararam, C.A.4
Skelly, P.J.5
-
36
-
-
77956412910
-
Non-specific activation of antiviral immunity and induction of RNA interference may engage the same pathway in the pacific white leg shrimp Litopenaeus vannamei
-
Labreuche Y, Veloso A, de la Vega E, Gross PS, Chapman RW, et al. (2010) Non-specific activation of antiviral immunity and induction of RNA interference may engage the same pathway in the pacific white leg shrimp Litopenaeus vannamei. Dev Comp Immunol 34: 1209-1218.
-
(2010)
Dev Comp Immunol
, vol.34
, pp. 1209-1218
-
-
Labreuche, Y.1
Veloso, A.2
de la Vega, E.3
Gross, P.S.4
Chapman, R.W.5
-
37
-
-
41949104147
-
Exploring systemic RNA interference in insects: A genome-wide survey for RNAi genes in Tribolium
-
Tomoyasu Y, Miller SC, Tomita S, Schoppmeier M, Grossman D, et al. (2008) Exploring systemic RNA interference in insects: A genome-wide survey for RNAi genes in Tribolium. Genome Biol 9: R10.
-
(2008)
Genome Biol
, vol.9
-
-
Tomoyasu, Y.1
Miller, S.C.2
Tomita, S.3
Schoppmeier, M.4
Grossman, D.5
-
38
-
-
42249109190
-
Cloning and phylogenetic analysis of sid-1-like genes from aphids
-
Xu W, Han Z, (2008) Cloning and phylogenetic analysis of sid-1-like genes from aphids. J Insect Sci 8: 1-6.
-
(2008)
J Insect Sci
, vol.8
, pp. 1-6
-
-
Xu, W.1
Han, Z.2
-
39
-
-
0141483742
-
Transport of dsRNA into cells by the transmembrane protein SID-1
-
Feinberg EH, Hunter CP, (2003) Transport of dsRNA into cells by the transmembrane protein SID-1. Science 301: 1545-1547.
-
(2003)
Science
, vol.301
, pp. 1545-1547
-
-
Feinberg, E.H.1
Hunter, C.P.2
-
40
-
-
77954711627
-
Enhanced neuronal RNAi in C. elegans using SID-1
-
Calixto A, Chelur D, Topalidou I, Chen X, Chalfie M, (2010) Enhanced neuronal RNAi in C. elegans using SID-1. Nat Methods 7: 554-559.
-
(2010)
Nat Methods
, vol.7
, pp. 554-559
-
-
Calixto, A.1
Chelur, D.2
Topalidou, I.3
Chen, X.4
Chalfie, M.5
-
41
-
-
1142277911
-
Genes required for systemic RNA interference in Caenorhabditis elegans
-
Tijsterman M, May RC, Simmer F, Okihara KL, Plasterk RH, (2004) Genes required for systemic RNA interference in Caenorhabditis elegans. Curr Biol 14: 111-116.
-
(2004)
Curr Biol
, vol.14
, pp. 111-116
-
-
Tijsterman, M.1
May, R.C.2
Simmer, F.3
Okihara, K.L.4
Plasterk, R.H.5
-
42
-
-
70350247605
-
RNAi and functional genomics in plant parasitic nematodes
-
Rosso MN, Jones JT, Abad P, (2009) RNAi and functional genomics in plant parasitic nematodes. Annu Rev Phytopathol 47: 207-232.
-
(2009)
Annu Rev Phytopathol
, vol.47
, pp. 207-232
-
-
Rosso, M.N.1
Jones, J.T.2
Abad, P.3
-
43
-
-
77954757866
-
Short interfering RNA-mediated knockdown of drosha and pasha in undifferentiated Meloidogyne incognita eggs leads to irregular growth and embryonic lethality
-
Dalzell JJ, Warnock ND, Stevenson MA, Mousley A, Fleming CC, et al. (2010) Short interfering RNA-mediated knockdown of drosha and pasha in undifferentiated Meloidogyne incognita eggs leads to irregular growth and embryonic lethality. Int J Parasitol 40: 1303-1310.
-
(2010)
Int J Parasitol
, vol.40
, pp. 1303-1310
-
-
Dalzell, J.J.1
Warnock, N.D.2
Stevenson, M.A.3
Mousley, A.4
Fleming, C.C.5
-
44
-
-
33646816759
-
Using Caenorhabditis elegans for functional analysis of genes of parasitic nematodes
-
Britton A, Murray L, (2006) Using Caenorhabditis elegans for functional analysis of genes of parasitic nematodes. Int J Parasitol 36: 651-659.
-
(2006)
Int J Parasitol
, vol.36
, pp. 651-659
-
-
Britton, A.1
Murray, L.2
-
45
-
-
33746608192
-
The endocytic pathway mediates cell entry of dsRNA to induce RNAi silencing
-
Saleh MC, van Rij RP, Hekele A, Gillis A, Foley E, et al. (2006) The endocytic pathway mediates cell entry of dsRNA to induce RNAi silencing. Nat Cell Biol 8: 793-802.
-
(2006)
Nat Cell Biol
, vol.8
, pp. 793-802
-
-
Saleh, M.C.1
van Rij, R.P.2
Hekele, A.3
Gillis, A.4
Foley, E.5
-
46
-
-
69349099587
-
Non-nematode-derived double-stranded RNAs induce profound phenotypic changes in Meloidogyne incognita and Globodera pallida infective juveniles
-
Dalzell JJ, McMaster S, Johnston MJ, Kerr R, Fleming CC, et al. (2009) Non-nematode-derived double-stranded RNAs induce profound phenotypic changes in Meloidogyne incognita and Globodera pallida infective juveniles. Int J Parasitol 39: 1503-1516.
-
(2009)
Int J Parasitol
, vol.39
, pp. 1503-1516
-
-
Dalzell, J.J.1
McMaster, S.2
Johnston, M.J.3
Kerr, R.4
Fleming, C.C.5
-
47
-
-
0034716907
-
Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance
-
Mourrain P, Béclin C, Elmayan T, Feuerbach F, Gordon C, et al. (2000) Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance. Cell 101: 533-542.
-
(2000)
Cell
, vol.101
, pp. 533-542
-
-
Mourrain, P.1
Béclin, C.2
Elmayan, T.3
Feuerbach, F.4
Gordon, C.5
-
48
-
-
0033551328
-
Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase
-
Cogoni C, Macino G, (1999) Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase. Nature 399: 166-169.
-
(1999)
Nature
, vol.399
, pp. 166-169
-
-
Cogoni, C.1
Macino, G.2
-
49
-
-
0035900651
-
On the role of RNA amplification in dsRNA-triggered gene silencing
-
Sijen T, Fleenor J, Simmer F, Thijssen KL, Parrish S, et al. (2001) On the role of RNA amplification in dsRNA-triggered gene silencing. Cell 107: 465-476.
-
(2001)
Cell
, vol.107
, pp. 465-476
-
-
Sijen, T.1
Fleenor, J.2
Simmer, F.3
Thijssen, K.L.4
Parrish, S.5
-
50
-
-
37149049127
-
In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans
-
Aoki K, Moriguchi H, Yoshioka T, Okawa K, Tabara H, (2007) In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans. EMBO J 26: 5007-5019.
-
(2007)
EMBO J
, vol.26
, pp. 5007-5019
-
-
Aoki, K.1
Moriguchi, H.2
Yoshioka, T.3
Okawa, K.4
Tabara, H.5
-
51
-
-
33846527241
-
Distinct populations of primary and secondary effectors during RNAi in C. elegans
-
Pak J, Fire A, (2007) Distinct populations of primary and secondary effectors during RNAi in C. elegans. Science 315: 241-244.
-
(2007)
Science
, vol.315
, pp. 241-244
-
-
Pak, J.1
Fire, A.2
-
52
-
-
33846524902
-
Secondary siRNAs result from unprimed RNA synthesis and form a distinct class
-
Sijen T, Steiner FA, Thijssen KL, Plasterk RH, (2007) Secondary siRNAs result from unprimed RNA synthesis and form a distinct class. Science 315: 244-247.
-
(2007)
Science
, vol.315
, pp. 244-247
-
-
Sijen, T.1
Steiner, F.A.2
Thijssen, K.L.3
Plasterk, R.H.4
-
53
-
-
77955082708
-
Distinct RNA-dependent RNA polymerases are required for RNAi triggered by double-stranded RNA versus truncated transgenes in Paramecium tetraurelia
-
Marker S, Le Mouel A, Meyer E, Simon M, (2010) Distinct RNA-dependent RNA polymerases are required for RNAi triggered by double-stranded RNA versus truncated transgenes in Paramecium tetraurelia. Nucleic Acids Res 38: 4092-4107.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 4092-4107
-
-
Marker, S.1
Le Mouel, A.2
Meyer, E.3
Simon, M.4
-
54
-
-
70349453559
-
Identification of an RNA-dependent RNA polymerase in Drosophila involved in RNAi and transposon suppression
-
Lipardi C, Paterson BM, (2009) Identification of an RNA-dependent RNA polymerase in Drosophila involved in RNAi and transposon suppression. Proc Natl Acad Sci USA 106: 15645-15650.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 15645-15650
-
-
Lipardi, C.1
Paterson, B.M.2
-
55
-
-
70349476898
-
Distinct argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline
-
Gu W, Shirayama M, Conte D Jr, Vasale J, Batista PJ, et al. (2009) Distinct argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline. Mol Cell 36: 231-244.
-
(2009)
Mol Cell
, vol.36
, pp. 231-244
-
-
Gu, W.1
Shirayama, M.2
Conte Jr., D.3
Vasale, J.4
Batista, P.J.5
-
56
-
-
0034708215
-
EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans
-
Smardon A, Spoerke JM, Stacey SC, Klein ME, Mackin N, et al. (2000) EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans. Curr Biol 10: 169-178.
-
(2000)
Curr Biol
, vol.10
, pp. 169-178
-
-
Smardon, A.1
Spoerke, J.M.2
Stacey, S.C.3
Klein, M.E.4
Mackin, N.5
-
57
-
-
77649249858
-
Sequential rounds of RNA-dependent RNA transcription drive endogenous small-RNA biogenesis in the ERGO-1/Argonaute pathway
-
Vasale JJ, Gu W, Thivierge C, Batista PJ, Claycomb JM, et al. (2010) Sequential rounds of RNA-dependent RNA transcription drive endogenous small-RNA biogenesis in the ERGO-1/Argonaute pathway. Proc Natl Acad Sci USA 107: 3582-3587.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 3582-3587
-
-
Vasale, J.J.1
Gu, W.2
Thivierge, C.3
Batista, P.J.4
Claycomb, J.M.5
-
58
-
-
23344449411
-
EGO-1, a putative RNA-directed RNA polymerase, promotes germline proliferation in parallel with GLP-1/notch signaling and regulates the spatial organization of nuclear pore complexes and germline P granules in Caenorhabditis elegans
-
Vought VE, Ohmachi M, Lee MH, Maine EM, (2005) EGO-1, a putative RNA-directed RNA polymerase, promotes germline proliferation in parallel with GLP-1/notch signaling and regulates the spatial organization of nuclear pore complexes and germline P granules in Caenorhabditis elegans. Genetics 170: 1121-1132.
-
(2005)
Genetics
, vol.170
, pp. 1121-1132
-
-
Vought, V.E.1
Ohmachi, M.2
Lee, M.H.3
Maine, E.M.4
-
59
-
-
27644457375
-
EGO-1, a putative RNA-dependent RNA polymerase, is required for heterochromatin assembly on unpaired DNA during C. elegans meiosis
-
Maine EM, Hauth J, Ratliff T, Vought VE, She X, et al. (2005) EGO-1, a putative RNA-dependent RNA polymerase, is required for heterochromatin assembly on unpaired DNA during C. elegans meiosis. Curr Biol 15: 1972-1978.
-
(2005)
Curr Biol
, vol.15
, pp. 1972-1978
-
-
Maine, E.M.1
Hauth, J.2
Ratliff, T.3
Vought, V.E.4
She, X.5
-
60
-
-
70149093944
-
Regulation of heterochromatin assembly on unpaired chromosomes during Caenorhabditis elegans meiosis by components of a small RNA-mediated pathway
-
She X, Xu X, Fedotov A, Kelly WG, Maine EM, (2009) Regulation of heterochromatin assembly on unpaired chromosomes during Caenorhabditis elegans meiosis by components of a small RNA-mediated pathway. PLoS Genet 5: e1000624.
-
(2009)
PLoS Genet
, vol.5
-
-
She, X.1
Xu, X.2
Fedotov, A.3
Kelly, W.G.4
Maine, E.M.5
-
61
-
-
70349459257
-
The argonaute CSR-1 and its 22G-RNA cofactors are required for holocentric chromosome segregation
-
Claycomb JM, Batista PJ, Pang KM, Gu W, Vasale JJ, et al. (2009) The argonaute CSR-1 and its 22G-RNA cofactors are required for holocentric chromosome segregation. Cell 139: 123-134.
-
(2009)
Cell
, vol.139
, pp. 123-134
-
-
Claycomb, J.M.1
Batista, P.J.2
Pang, K.M.3
Gu, W.4
Vasale, J.J.5
-
62
-
-
71549171117
-
A genomewide RNAi screen for genes that affect the stability, distribution and function of P granules in Caenorhabditis elegans
-
Updike DL, Strome S, (2009) A genomewide RNAi screen for genes that affect the stability, distribution and function of P granules in Caenorhabditis elegans. Genetics 183: 1397-1419.
-
(2009)
Genetics
, vol.183
, pp. 1397-1419
-
-
Updike, D.L.1
Strome, S.2
-
63
-
-
0037031152
-
Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi
-
Simmer F, Tijsterman M, Parrish S, Koushika SP, Nonet ML, et al. (2002) Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi. Curr Biol 12: 1317-1319.
-
(2002)
Curr Biol
, vol.12
, pp. 1317-1319
-
-
Simmer, F.1
Tijsterman, M.2
Parrish, S.3
Koushika, S.P.4
Nonet, M.L.5
-
64
-
-
73249136094
-
26G endo-siRNAs regulate spermatogenic and zygotic gene expression in Caenorhabditis elegans
-
Han T, Manoharan AP, Harkins TT, Bouffard P, Fitzpatrick C, et al. (2009) 26G endo-siRNAs regulate spermatogenic and zygotic gene expression in Caenorhabditis elegans. Proc Natl Acad Sci USA 106: 18674-18679.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 18674-18679
-
-
Han, T.1
Manoharan, A.P.2
Harkins, T.T.3
Bouffard, P.4
Fitzpatrick, C.5
-
65
-
-
77649253620
-
Distinct phases of siRNA synthesis in an endogenous RNAi pathway in C. elegans soma
-
Gent JI, Lamm AT, Pavelec DM, Maniar JM, Parameswaran P, et al. (2010) Distinct phases of siRNA synthesis in an endogenous RNAi pathway in C. elegans soma. Mol Cell 37: 679-689.
-
(2010)
Mol Cell
, vol.37
, pp. 679-689
-
-
Gent, J.I.1
Lamm, A.T.2
Pavelec, D.M.3
Maniar, J.M.4
Parameswaran, P.5
-
66
-
-
0035500594
-
Stop making nonSense: the C. elegans smg genes
-
Mango SE, (2001) Stop making nonSense: the C. elegans smg genes. Trends Genet 17: 646-653.
-
(2001)
Trends Genet
, vol.17
, pp. 646-653
-
-
Mango, S.E.1
-
67
-
-
21044446786
-
Functional genomic analysis of RNA interference in C. elegans
-
Kim JK, Gabel HW, Kamath RS, Tewari M, Pasquinelli A, et al. (2005) Functional genomic analysis of RNA interference in C. elegans. Science 308: 1164-1167.
-
(2005)
Science
, vol.308
, pp. 1164-1167
-
-
Kim, J.K.1
Gabel, H.W.2
Kamath, R.S.3
Tewari, M.4
Pasquinelli, A.5
-
68
-
-
77649254581
-
Argonautes ALG-3 and ALG-4 are required for spermatogenesis-specific 26G-RNAs and thermotolerant sperm in Caenorhabditis elegans
-
Conine CC, Batista PJ, Gu W, Claycomb JM, Chaves DA, et al. (2010) Argonautes ALG-3 and ALG-4 are required for spermatogenesis-specific 26G-RNAs and thermotolerant sperm in Caenorhabditis elegans. Proc Natl Acad Sci USA 107: 3588-3593.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 3588-3593
-
-
Conine, C.C.1
Batista, P.J.2
Gu, W.3
Claycomb, J.M.4
Chaves, D.A.5
-
70
-
-
0141843655
-
A micrococcal nuclease homologue in RNAi effector complexes
-
Caudy AA, Ketting RF, Hammond SM, Denli AM, Bathoorn AM, et al. (2003) A micrococcal nuclease homologue in RNAi effector complexes. Nature 425: 411-414.
-
(2003)
Nature
, vol.425
, pp. 411-414
-
-
Caudy, A.A.1
Ketting, R.F.2
Hammond, S.M.3
Denli, A.M.4
Bathoorn, A.M.5
-
71
-
-
23744492247
-
The developmental timing regulator AIN-1 interacts with miRISCs and may target the argonaute protein ALG-1 to cytoplasmic P bodies in C. elegans
-
Ding L, Spencer A, Morita K, Han M, (2005) The developmental timing regulator AIN-1 interacts with miRISCs and may target the argonaute protein ALG-1 to cytoplasmic P bodies in C. elegans. Mol Cell 19: 437-447.
-
(2005)
Mol Cell
, vol.19
, pp. 437-447
-
-
Ding, L.1
Spencer, A.2
Morita, K.3
Han, M.4
-
72
-
-
36249012075
-
Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2
-
Zhang L, Ding L, Cheung TH, Dong MQ, Chen J, et al. (2007) Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2. Mol Cell 28: 598-613.
-
(2007)
Mol Cell
, vol.28
, pp. 598-613
-
-
Zhang, L.1
Ding, L.2
Cheung, T.H.3
Dong, M.Q.4
Chen, J.5
-
73
-
-
52949098752
-
Identification of specific let-7 microRNA binding complexes in Caenorhabditis elegans
-
Chan SP, Ramaswamy G, Choi EY, Slack FJ, (2008) Identification of specific let-7 microRNA binding complexes in Caenorhabditis elegans. RNA 14: 2104-2114.
-
(2008)
RNA
, vol.14
, pp. 2104-2114
-
-
Chan, S.P.1
Ramaswamy, G.2
Choi, E.Y.3
Slack, F.J.4
-
74
-
-
1342346710
-
A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans
-
Kennedy S, Wang D, Ruvkun G, (2004) A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans. Nature 427: 645-649.
-
(2004)
Nature
, vol.427
, pp. 645-649
-
-
Kennedy, S.1
Wang, D.2
Ruvkun, G.3
-
75
-
-
0036810232
-
The role of RNA editing by ADARs in RNAi
-
Knight SW, Bass BL, (2002) The role of RNA editing by ADARs in RNAi. Mol Cell 10: 809-817.
-
(2002)
Mol Cell
, vol.10
, pp. 809-817
-
-
Knight, S.W.1
Bass, B.L.2
-
76
-
-
71549147194
-
Requirement for the ERI/DICER complex in endogenous RNA interference and sperm development in Caenorhabditis elegans
-
Pavelec DM, Lachowiec J, Duchaine TF, Smith HE, Kennedy S, (2009) Requirement for the ERI/DICER complex in endogenous RNA interference and sperm development in Caenorhabditis elegans. Genetics 183: 1283-1295.
-
(2009)
Genetics
, vol.183
, pp. 1283-1295
-
-
Pavelec, D.M.1
Lachowiec, J.2
Duchaine, T.F.3
Smith, H.E.4
Kennedy, S.5
-
77
-
-
45149109796
-
The Caenorhabditis elegans ekl (enhancer of ksr-1 lethality) genes include putative components of a germline small RNA pathway
-
Rocheleau CE, Cullison K, Huang K, Bernstein Y, Spilker AC, et al. (2008) The Caenorhabditis elegans ekl (enhancer of ksr-1 lethality) genes include putative components of a germline small RNA pathway. Genetics 178: 1431-1443.
-
(2008)
Genetics
, vol.178
, pp. 1431-1443
-
-
Rocheleau, C.E.1
Cullison, K.2
Huang, K.3
Bernstein, Y.4
Spilker, A.C.5
-
78
-
-
78651240094
-
Development of an In Vivo RNAi Protocol to Investigate Gene Function in the Filarial Nematode, Brugia malayi
-
Song C, Gallup JM, Day TA, Bartholomay LC, Kimber MJ, (2010) Development of an In Vivo RNAi Protocol to Investigate Gene Function in the Filarial Nematode, Brugia malayi. PLoS Pathogens 6: e1001239.
-
(2010)
PLoS Pathogens
, vol.6
-
-
Song, C.1
Gallup, J.M.2
Day, T.A.3
Bartholomay, L.C.4
Kimber, M.J.5
|