-
2
-
-
0036848765
-
Tracking historic migrations of the Irish potato famine pathogen, Phytophthora infestans
-
10.1016/S1286-4579(02)00010-2, 12443902
-
Ristaino JB. Tracking historic migrations of the Irish potato famine pathogen, Phytophthora infestans. Microbes and Infection 2002, 4:1369-1377. 10.1016/S1286-4579(02)00010-2, 12443902.
-
(2002)
Microbes and Infection
, vol.4
, pp. 1369-1377
-
-
Ristaino, J.B.1
-
3
-
-
46749130043
-
Societal costs of late blight in potato and prospects of durable resistance through cisgenic modification
-
Haverkort A, Boonekamp P, Hutten R, Jacobsen E, Lotz L, Kessel G, Visser R, van der Vossen E. Societal costs of late blight in potato and prospects of durable resistance through cisgenic modification. Potato Res 2008, 51:47-57.
-
(2008)
Potato Res
, vol.51
, pp. 47-57
-
-
Haverkort, A.1
Boonekamp, P.2
Hutten, R.3
Jacobsen, E.4
Lotz, L.5
Kessel, G.6
Visser, R.7
van der Vossen, E.8
-
4
-
-
70349281388
-
Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans
-
10.1038/nature08358, 19741609
-
Haas BJ, Kamoun S, Zody MC, Jiang RHY, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T, Bozkurt TO, Ah-Fong AMV, Alvarado L, Anderson VL, Armstrong MR, Avrova AO, Baxter L, Beynon JL, Boevink PC, Bollmann SR, Bos JIB, Bulone V, Cai G, Cakir C, Carrington JC, Chawner M, Conti L, Costanzo S, Ewan R, Fahlgren N, et al. Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature 2009, 461:393-398. 10.1038/nature08358, 19741609.
-
(2009)
Nature
, vol.461
, pp. 393-398
-
-
Haas, B.J.1
Kamoun, S.2
Zody, M.C.3
Jiang, R.H.Y.4
Handsaker, R.E.5
Cano, L.M.6
Grabherr, M.7
Kodira, C.D.8
Raffaele, S.9
Torto-Alalibo, T.10
Bozkurt, T.O.11
Ah-Fong, A.M.V.12
Alvarado, L.13
Anderson, V.L.14
Armstrong, M.R.15
Avrova, A.O.16
Baxter, L.17
Beynon, J.L.18
Boevink, P.C.19
Bollmann, S.R.20
Bos, J.I.B.21
Bulone, V.22
Cai, G.23
Cakir, C.24
Carrington, J.C.25
Chawner, M.26
Conti, L.27
Costanzo, S.28
Ewan, R.29
Fahlgren, N.30
more..
-
5
-
-
33751583804
-
Phytophthora genomics: the plant destroyers'genome decoded
-
10.1094/MPMI-19-1295, 17153913
-
Govers F, Gijzen M. Phytophthora genomics: the plant destroyers'genome decoded. Mol Plant Microbe Interact 2006, 19:1295-1301. 10.1094/MPMI-19-1295, 17153913.
-
(2006)
Mol Plant Microbe Interact
, vol.19
, pp. 1295-1301
-
-
Govers, F.1
Gijzen, M.2
-
6
-
-
33748329373
-
Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis
-
10.1126/science.1128796, 16946064
-
Tyler BM, Tripathy S, Zhang X, Dehal P, Jiang RHY, Aerts A, Arredondo FD, Baxter L, Bensasson D, Beynon JL, Chapman J, Damasceno CMB, Dorrance AE, Dou D, Dickerman AW, Dubchak I, Garbelotto M, Gijzen M, Gordon SG, Govers F, Grunwald NJ, Huang W, Ivors KL, Jones RW, Kamoun S, Krampis K, Lamour KH, Lee MK, McDonald WH, Medina M, et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science 2006, 313:1261-1266. 10.1126/science.1128796, 16946064.
-
(2006)
Science
, vol.313
, pp. 1261-1266
-
-
Tyler, B.M.1
Tripathy, S.2
Zhang, X.3
Dehal, P.4
Jiang, R.H.Y.5
Aerts, A.6
Arredondo, F.D.7
Baxter, L.8
Bensasson, D.9
Beynon, J.L.10
Chapman, J.11
Damasceno, C.M.B.12
Dorrance, A.E.13
Dou, D.14
Dickerman, A.W.15
Dubchak, I.16
Garbelotto, M.17
Gijzen, M.18
Gordon, S.G.19
Govers, F.20
Grunwald, N.J.21
Huang, W.22
Ivors, K.L.23
Jones, R.W.24
Kamoun, S.25
Krampis, K.26
Lamour, K.H.27
Lee, M.K.28
McDonald, W.H.29
Medina, M.30
more..
-
7
-
-
33751581724
-
Genome wide analysis of phospholipid signaling genes in Phytophthora spp.: novelties and a missing link
-
10.1094/MPMI-19-1337, 17153918
-
Meijer HJG, Govers F. Genome wide analysis of phospholipid signaling genes in Phytophthora spp.: novelties and a missing link. Mol Plant-Microbe Interact 2006, 19:1337-1347. 10.1094/MPMI-19-1337, 17153918.
-
(2006)
Mol Plant-Microbe Interact
, vol.19
, pp. 1337-1347
-
-
Meijer, H.J.G.1
Govers, F.2
-
8
-
-
67650511674
-
Multiple horizontal gene transfer events and domain fusions have created novel regulatory and metabolic networks in the oomycete genome
-
10.1371/journal.pone.0006133, 2705460, 19582169
-
Morris PF, Schlosser LR, Onasch KD, Wittenschlaeger T, Austin R, Provart N. Multiple horizontal gene transfer events and domain fusions have created novel regulatory and metabolic networks in the oomycete genome. PLoS One 2009, 4:e6133. 10.1371/journal.pone.0006133, 2705460, 19582169.
-
(2009)
PLoS One
, vol.4
-
-
Morris, P.F.1
Schlosser, L.R.2
Onasch, K.D.3
Wittenschlaeger, T.4
Austin, R.5
Provart, N.6
-
9
-
-
24144503755
-
Myosin domain evolution and the primary divergence of eukaryotes
-
10.1038/nature03949, 16121172
-
Richards TA, Cavalier-Smith T. Myosin domain evolution and the primary divergence of eukaryotes. Nature 2005, 436:1113-1118. 10.1038/nature03949, 16121172.
-
(2005)
Nature
, vol.436
, pp. 1113-1118
-
-
Richards, T.A.1
Cavalier-Smith, T.2
-
10
-
-
75549091468
-
MEROPS: the peptidase database
-
2808883, 19892822
-
Rawlings ND, Barrett AJ, Bateman A. MEROPS: the peptidase database. Nucl Acids Res 2010, 38(Suppl 1):D227-D233. 2808883, 19892822.
-
(2010)
Nucl Acids Res
, vol.38
, Issue.SUPPL. 1
-
-
Rawlings, N.D.1
Barrett, A.J.2
Bateman, A.3
-
11
-
-
0036882390
-
Structure and mechanism of the pepsin-like family of aspartic peptidases
-
10.1021/cr010167q, 12475196
-
Dunn BM. Structure and mechanism of the pepsin-like family of aspartic peptidases. Chem Rev 2002, 102:4431-4458. 10.1021/cr010167q, 12475196.
-
(2002)
Chem Rev
, vol.102
, pp. 4431-4458
-
-
Dunn, B.M.1
-
12
-
-
0033595706
-
β-secretase cleavage of Alzheimer's amyloid precursor protein by the transmembrane aspartic protease BACE
-
10.1126/science.286.5440.735, 10531052
-
Vassar R, Bennett BD, Babu-Khan S, Kahn S, Mendiaz EA, Denis P, Teplow DB, Ross S, Amarante P, Loeloff R, Luo Y, Fisher S, Fuller L, Edenson S, Lile J, Jarosinski MA, Biere AL, Curran E, Burgess T, Louis JC, Collins F, Treanor J, Rogers G, Citron M. β-secretase cleavage of Alzheimer's amyloid precursor protein by the transmembrane aspartic protease BACE. Science 1999, 286:735-741. 10.1126/science.286.5440.735, 10531052.
-
(1999)
Science
, vol.286
, pp. 735-741
-
-
Vassar, R.1
Bennett, B.D.2
Babu-Khan, S.3
Kahn, S.4
Mendiaz, E.A.5
Denis, P.6
Teplow, D.B.7
Ross, S.8
Amarante, P.9
Loeloff, R.10
Luo, Y.11
Fisher, S.12
Fuller, L.13
Edenson, S.14
Lile, J.15
Jarosinski, M.A.16
Biere, A.L.17
Curran, E.18
Burgess, T.19
Louis, J.C.20
Collins, F.21
Treanor, J.22
Rogers, G.23
Citron, M.24
more..
-
13
-
-
2942512921
-
Structure and function of plant aspartic proteinases
-
10.1111/j.1432-1033.2004.04136.x, 15153096
-
Simoes I, Faro C. Structure and function of plant aspartic proteinases. Eur J Biochem 2004, 271:2067-2075. 10.1111/j.1432-1033.2004.04136.x, 15153096.
-
(2004)
Eur J Biochem
, vol.271
, pp. 2067-2075
-
-
Simoes, I.1
Faro, C.2
-
14
-
-
1842614199
-
An extracellular aspartic protease functions in Arabidopsis disease resistance signaling
-
10.1038/sj.emboj.7600086, 380998, 14765119
-
Xia YJ, Suzuki H, Borevitz J, Blount J, Guo ZJ, Patel K, Dixon RA, Lamb C. An extracellular aspartic protease functions in Arabidopsis disease resistance signaling. EMBO J 2004, 23:980-988. 10.1038/sj.emboj.7600086, 380998, 14765119.
-
(2004)
EMBO J
, vol.23
, pp. 980-988
-
-
Xia, Y.J.1
Suzuki, H.2
Borevitz, J.3
Blount, J.4
Guo, Z.J.5
Patel, K.6
Dixon, R.A.7
Lamb, C.8
-
15
-
-
7344249601
-
HIV protease genotype and viral sensitivity to HIV protease inhibitors following saquinavir therapy
-
10.1097/00002030-199813000-00007, 9764779
-
Craig C, Race E, Sheldon J, Whittaker L, Gilbert S, Moffatt A, Rose J, Dissanayeke S, Chirn GW, Duncan IB, Cammack N. HIV protease genotype and viral sensitivity to HIV protease inhibitors following saquinavir therapy. AIDS 1998, 12:1611-1618. 10.1097/00002030-199813000-00007, 9764779.
-
(1998)
AIDS
, vol.12
, pp. 1611-1618
-
-
Craig, C.1
Race, E.2
Sheldon, J.3
Whittaker, L.4
Gilbert, S.5
Moffatt, A.6
Rose, J.7
Dissanayeke, S.8
Chirn, G.W.9
Duncan, I.B.10
Cammack, N.11
-
16
-
-
0035521154
-
Aspartic proteases of Plasmodium falciparum and other parasitic protozoa as drug targets
-
10.1016/S1471-4922(01)02037-2, 11872398
-
Coombs GH, Goldberg DE, Klemba M, Berry C, Kay J, Mottram JC. Aspartic proteases of Plasmodium falciparum and other parasitic protozoa as drug targets. Trends Parasitol 2001, 17:532-537. 10.1016/S1471-4922(01)02037-2, 11872398.
-
(2001)
Trends Parasitol
, vol.17
, pp. 532-537
-
-
Coombs, G.H.1
Goldberg, D.E.2
Klemba, M.3
Berry, C.4
Kay, J.5
Mottram, J.C.6
-
17
-
-
0031804609
-
Inhibitors of HIV-proteinase: a major success of structure-assisted drug design
-
Wlodawer A, Vondrasek J. Inhibitors of HIV-proteinase: a major success of structure-assisted drug design. Ann Rev Biophys Biomol Struct 1998, 27:249-284.
-
(1998)
Ann Rev Biophys Biomol Struct
, vol.27
, pp. 249-284
-
-
Wlodawer, A.1
Vondrasek, J.2
-
18
-
-
76249091034
-
An aspartyl protease directs malaria effector proteins to the host cell
-
10.1038/nature08728, 2818761, 20130643
-
Boddey JA, Hodder AN, Gunther S, Gilson PR, Patsiouras H, Kapp EA, Pearce JA, de Koning-Ward TF, Simpson RJ, Crabb BS, Cowman AF. An aspartyl protease directs malaria effector proteins to the host cell. Nature 2010, 463:627-631. 10.1038/nature08728, 2818761, 20130643.
-
(2010)
Nature
, vol.463
, pp. 627-631
-
-
Boddey, J.A.1
Hodder, A.N.2
Gunther, S.3
Gilson, P.R.4
Patsiouras, H.5
Kapp, E.A.6
Pearce, J.A.7
de Koning-Ward, T.F.8
Simpson, R.J.9
Crabb, B.S.10
Cowman, A.F.11
-
19
-
-
76249123168
-
Plasmepsin V licenses Plasmodium proteins for export into the host erythrocyte
-
10.1038/nature08726, 2826791, 20130644
-
Russo I, Babbitt S, Muralidharan V, Butler T, Oksman A, Goldberg DE. Plasmepsin V licenses Plasmodium proteins for export into the host erythrocyte. Nature 2010, 463:632-636. 10.1038/nature08726, 2826791, 20130644.
-
(2010)
Nature
, vol.463
, pp. 632-636
-
-
Russo, I.1
Babbitt, S.2
Muralidharan, V.3
Butler, T.4
Oksman, A.5
Goldberg, D.E.6
-
20
-
-
70350739115
-
Ten things to know about oomycetes effectors
-
10.1111/j.1364-3703.2009.00593.x, 19849785
-
Shornack S, Huitema E, Cano LM, Bozkurt TO, Oliva R, van Damme M, Schwizer S, Raffaele S, Chaparro-Garcia A, Farrer R, Segretin ME, Bos J, Haas BJ, Zody MC, Nusbaum C, Win J, Thines M, Kamoun S. Ten things to know about oomycetes effectors. Mol Plant Pathol 2009, 10:795-803. 10.1111/j.1364-3703.2009.00593.x, 19849785.
-
(2009)
Mol Plant Pathol
, vol.10
, pp. 795-803
-
-
Shornack, S.1
Huitema, E.2
Cano, L.M.3
Bozkurt, T.O.4
Oliva, R.5
van Damme, M.6
Schwizer, S.7
Raffaele, S.8
Chaparro-Garcia, A.9
Farrer, R.10
Segretin, M.E.11
Bos, J.12
Haas, B.J.13
Zody, M.C.14
Nusbaum, C.15
Win, J.16
Thines, M.17
Kamoun, S.18
-
21
-
-
0031956497
-
Molecular mechanisms for the conversion of zymogens to active proteolytic enzymes
-
Khan AR, James MNG. Molecular mechanisms for the conversion of zymogens to active proteolytic enzymes. Prot Sci 1998, 7:815-836.
-
(1998)
Prot Sci
, vol.7
, pp. 815-836
-
-
Khan, A.R.1
James, M.N.G.2
-
22
-
-
0025297753
-
X-ray analyses of aspartic proteinases. II. Three-dimensional structure of the hexagonal crystal form of porcine pepsin at 2.3 A resolution
-
10.1016/0022-2836(90)90156-G, 2115088
-
Cooper JB, Khan G, Taylor G, Tickle IJ, Blundell TL. X-ray analyses of aspartic proteinases. II. Three-dimensional structure of the hexagonal crystal form of porcine pepsin at 2.3 A resolution. J Mol Biol 1990, 214:199-222. 10.1016/0022-2836(90)90156-G, 2115088.
-
(1990)
J Mol Biol
, vol.214
, pp. 199-222
-
-
Cooper, J.B.1
Khan, G.2
Taylor, G.3
Tickle, I.J.4
Blundell, T.L.5
-
23
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
10.1093/nar/25.17.3389, 146917, 9254694
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucl Acids Res 1997, 25:3389-3402. 10.1093/nar/25.17.3389, 146917, 9254694.
-
(1997)
Nucl Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
24
-
-
0031743421
-
Profile hidden Markov models
-
10.1093/bioinformatics/14.9.755, 9918945
-
Eddy SR. Profile hidden Markov models. Bioinformatics 1998, 14:755-763. 10.1093/bioinformatics/14.9.755, 9918945.
-
(1998)
Bioinformatics
, vol.14
, pp. 755-763
-
-
Eddy, S.R.1
-
25
-
-
71249099770
-
The Botrytis cinerea aspartic proteinase family
-
ten Have A, Espino JJ, Dekkers E, Van Sluyter SC, Brito N, Kay J, Gonzalez C, van Kan JAL. The Botrytis cinerea aspartic proteinase family. Fung Genet Biol 2010, 47:53-65.
-
(2010)
Fung Genet Biol
, vol.47
, pp. 53-65
-
-
ten Have, A.1
Espino, J.J.2
Dekkers, E.3
Van Sluyter, S.C.4
Brito, N.5
Kay, J.6
Gonzalez, C.7
van Kan, J.A.L.8
-
26
-
-
70350442584
-
Pepsin homologues in bacteria
-
10.1186/1471-2164-10-437, 2761423, 19758436
-
Rawlings ND, Bateman A. Pepsin homologues in bacteria. BMC Genomics 2009, 10:437. 10.1186/1471-2164-10-437, 2761423, 19758436.
-
(2009)
BMC Genomics
, vol.10
, pp. 437
-
-
Rawlings, N.D.1
Bateman, A.2
-
27
-
-
32244442042
-
The presence of GC-AG introns in Neurospora crassa and other euascomycetes determined from analyses of complete genomes: Implications for automated gene prediction
-
10.1016/j.ygeno.2005.11.014, 16406724
-
Rep M, Duyvesteijn RGE, Gale L, Usgaard T, Cornelissen BJC, Ma LJ, Ward TJ. The presence of GC-AG introns in Neurospora crassa and other euascomycetes determined from analyses of complete genomes: Implications for automated gene prediction. Genomics 2006, 87:338-347. 10.1016/j.ygeno.2005.11.014, 16406724.
-
(2006)
Genomics
, vol.87
, pp. 338-347
-
-
Rep, M.1
Duyvesteijn, R.G.E.2
Gale, L.3
Usgaard, T.4
Cornelissen, B.J.C.5
Ma, L.J.6
Ward, T.J.7
-
28
-
-
0033118334
-
Molecular tinkering of G protein-coupled receptors: an evolutionary success
-
10.1093/emboj/18.7.1723, 1171258, 10202136
-
Bockaert J, Pin JP. Molecular tinkering of G protein-coupled receptors: an evolutionary success. EMBO J 1999, 18:1723-1729. 10.1093/emboj/18.7.1723, 1171258, 10202136.
-
(1999)
EMBO J
, vol.18
, pp. 1723-1729
-
-
Bockaert, J.1
Pin, J.P.2
-
29
-
-
34248163056
-
A G protein-coupled receptor with a lipid kinase domain is involved in cell-density sensing
-
10.1016/j.cub.2007.04.029, 17481898
-
Bakthavatsalam D, Brazill D, Gomer RH, Eichinger L, Rivero F, Noegel AA. A G protein-coupled receptor with a lipid kinase domain is involved in cell-density sensing. Curr Biol 2007, 17:892-897. 10.1016/j.cub.2007.04.029, 17481898.
-
(2007)
Curr Biol
, vol.17
, pp. 892-897
-
-
Bakthavatsalam, D.1
Brazill, D.2
Gomer, R.H.3
Eichinger, L.4
Rivero, F.5
Noegel, A.A.6
-
30
-
-
0019887799
-
Identification of common molecular subsequences
-
10.1016/0022-2836(81)90087-5, 7265238
-
Smith TF, Waterman MS. Identification of common molecular subsequences. J Mol Biol 1981, 147:195-197. 10.1016/0022-2836(81)90087-5, 7265238.
-
(1981)
J Mol Biol
, vol.147
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
-
31
-
-
34247141459
-
Protease-activated receptor signaling: new roles and regulatory mechanisms
-
10.1097/MOH.0b013e3280dce568, 17414212
-
Traynelis SF, Trejo J. Protease-activated receptor signaling: new roles and regulatory mechanisms. Curr Opin Hematol 2007, 14:230-235. 10.1097/MOH.0b013e3280dce568, 17414212.
-
(2007)
Curr Opin Hematol
, vol.14
, pp. 230-235
-
-
Traynelis, S.F.1
Trejo, J.2
-
32
-
-
67349087399
-
Multifunctional aspartic peptidase prosegments
-
Horimoto Y, Dee DR, Yada RY. Multifunctional aspartic peptidase prosegments. New Biotechnol 2009, 25:318-324.
-
(2009)
New Biotechnol
, vol.25
, pp. 318-324
-
-
Horimoto, Y.1
Dee, D.R.2
Yada, R.Y.3
-
33
-
-
0035971166
-
The Pro domain of β-secretase does not confer strict zymogen-like properties but does assist proper folding of the protease domain
-
Shi XP, Chen E, Yin KC, Na S, Garsky VM, Lai MT, Li YM, Platchek M, Register RB, Sardana MK, Tang MJ, Thiebeau J, Wood T, Shafer JA, Gardell SJ. The Pro domain of β-secretase does not confer strict zymogen-like properties but does assist proper folding of the protease domain. J Biol Chem 2001, 276:10366-10373.
-
(2001)
J Biol Chem
, vol.276
, pp. 10366-10373
-
-
Shi, X.P.1
Chen, E.2
Yin, K.C.3
Na, S.4
Garsky, V.M.5
Lai, M.T.6
Li, Y.M.7
Platchek, M.8
Register, R.B.9
Sardana, M.K.10
Tang, M.J.11
Thiebeau, J.12
Wood, T.13
Shafer, J.A.14
Gardell, S.J.15
-
34
-
-
63449130335
-
Large scale refolding and purification of the catalytic domain of Human BACE-2 produced in E. coli
-
Emmons TL, Mildner AM, Lull JM, Leone JW, Fischer HD, Heinrikson RL, Tomasselli AG. Large scale refolding and purification of the catalytic domain of Human BACE-2 produced in E. coli. Prot Pep Lett 2009, 16:121-131.
-
(2009)
Prot Pep Lett
, vol.16
, pp. 121-131
-
-
Emmons, T.L.1
Mildner, A.M.2
Lull, J.M.3
Leone, J.W.4
Fischer, H.D.5
Heinrikson, R.L.6
Tomasselli, A.G.7
-
35
-
-
0033518251
-
Purification and cloning of amyloid precursor protein beta-secretase from human brain
-
10.1038/990114, 10591214
-
Sinha S, Anderson JP, Barbour R, Basi GS, Caccavello R, Davis D, Doan M, Dovey HF, Frigon N, Hong J, Jacobson-Croak K, Jewett N, Keim P, Knops J, Lieberburg I, Power M, Tan H, Tatsuno G, Tung J, Schenk D, Seubert P, Suomensaari SM, Wang SW, Walker D, Zhao J, McConlogue L, John V. Purification and cloning of amyloid precursor protein beta-secretase from human brain. Nature 1999, 402:537-540. 10.1038/990114, 10591214.
-
(1999)
Nature
, vol.402
, pp. 537-540
-
-
Sinha, S.1
Anderson, J.P.2
Barbour, R.3
Basi, G.S.4
Caccavello, R.5
Davis, D.6
Doan, M.7
Dovey, H.F.8
Frigon, N.9
Hong, J.10
Jacobson-Croak, K.11
Jewett, N.12
Keim, P.13
Knops, J.14
Lieberburg, I.15
Power, M.16
Tan, H.17
Tatsuno, G.18
Tung, J.19
Schenk, D.20
Seubert, P.21
Suomensaari, S.M.22
Wang, S.W.23
Walker, D.24
Zhao, J.25
McConlogue, L.26
John, V.27
more..
-
36
-
-
76249118271
-
An APP inhibitory domain containing the Flemish mutation residue modulates gamma-secretase activity for A beta production
-
Tian Y, Bassit B, Chau DM, Li YM. An APP inhibitory domain containing the Flemish mutation residue modulates gamma-secretase activity for A beta production. Nature Struct Mol Biol 2010, 17:151-159.
-
(2010)
Nature Struct Mol Biol
, vol.17
, pp. 151-159
-
-
Tian, Y.1
Bassit, B.2
Chau, D.M.3
Li, Y.M.4
-
37
-
-
0029862567
-
Involvement of a residue at position 75 in the catalytic mechanism of a fungal aspartic proteinase, Rhizomucor pusilus pepsin. Replacement of tyrosine 75 on the flap by asparagine enhances catalytic efficiency
-
10.1093/protein/9.10.869, 8931126
-
Park YN, Aikawa J, Nishiyama M, Horinouchi S, Beppu T. Involvement of a residue at position 75 in the catalytic mechanism of a fungal aspartic proteinase, Rhizomucor pusilus pepsin. Replacement of tyrosine 75 on the flap by asparagine enhances catalytic efficiency. Protein Eng 1996, 9:869-875. 10.1093/protein/9.10.869, 8931126.
-
(1996)
Protein Eng
, vol.9
, pp. 869-875
-
-
Park, Y.N.1
Aikawa, J.2
Nishiyama, M.3
Horinouchi, S.4
Beppu, T.5
-
38
-
-
0029064384
-
The gene encoding bovine pregnancy-associated glycoprotein-1, an inactive member of the aspartic proteinase family
-
10.1016/0378-1119(94)00928-L, 7622048
-
Xie SC, Green J, Beckers JF, Roberts RM. The gene encoding bovine pregnancy-associated glycoprotein-1, an inactive member of the aspartic proteinase family. Gene 1995, 159:193-197. 10.1016/0378-1119(94)00928-L, 7622048.
-
(1995)
Gene
, vol.159
, pp. 193-197
-
-
Xie, S.C.1
Green, J.2
Beckers, J.F.3
Roberts, R.M.4
-
39
-
-
0036468777
-
Cockroach Allergen Bla g2: structure, function, and implications for allergic sensitization
-
Pomes A, Chapman MD, Vailes LD, Blundell TL, Dhanaraj V. Cockroach Allergen Bla g2: structure, function, and implications for allergic sensitization. Am J Respir Crit Care Med 2002, 165:391-397.
-
(2002)
Am J Respir Crit Care Med
, vol.165
, pp. 391-397
-
-
Pomes, A.1
Chapman, M.D.2
Vailes, L.D.3
Blundell, T.L.4
Dhanaraj, V.5
-
40
-
-
16244384649
-
Crystal structure of cockroach allergen Bla g2, an unusual zinc binding aspartic protease with a novel mode of self-inhibition
-
10.1016/j.jmb.2005.02.062, 15811379
-
Gustchina A, Li M, Wünschmann S, Chapman MD, Pomés A, Wlodawer A. Crystal structure of cockroach allergen Bla g2, an unusual zinc binding aspartic protease with a novel mode of self-inhibition. J Mol Biol 2005, 348:433-444. 10.1016/j.jmb.2005.02.062, 15811379.
-
(2005)
J Mol Biol
, vol.348
, pp. 433-444
-
-
Gustchina, A.1
Li, M.2
Wünschmann, S.3
Chapman, M.D.4
Pomés, A.5
Wlodawer, A.6
-
41
-
-
3142679311
-
Enzymic and structural characterization of nepenthesin, a unique member of a novel subfamily of aspartic proteinases
-
10.1042/BJ20031575, 1133788, 15035659
-
Athauda SBP, Matsumoto K, Rajapakshe S, Kuribayashi M, Kojima M, Kubomura-Yoshida N, Iwamatsu A, Shibata C, Inoue H, Takahashi K. Enzymic and structural characterization of nepenthesin, a unique member of a novel subfamily of aspartic proteinases. Biochem J 2004, 381:295-306. 10.1042/BJ20031575, 1133788, 15035659.
-
(2004)
Biochem J
, vol.381
, pp. 295-306
-
-
Athauda, S.B.P.1
Matsumoto, K.2
Rajapakshe, S.3
Kuribayashi, M.4
Kojima, M.5
Kubomura-Yoshida, N.6
Iwamatsu, A.7
Shibata, C.8
Inoue, H.9
Takahashi, K.10
-
42
-
-
35748950440
-
Characterization of recombinant CDR1, an Arabidopsis aspartic proteinase involved in disease resistance
-
10.1074/jbc.M702477200, 17650510
-
Simoes I, Faro R, Bur D, Faro C. Characterization of recombinant CDR1, an Arabidopsis aspartic proteinase involved in disease resistance. J Biol Chem 2007, 282:31358-31365. 10.1074/jbc.M702477200, 17650510.
-
(2007)
J Biol Chem
, vol.282
, pp. 31358-31365
-
-
Simoes, I.1
Faro, R.2
Bur, D.3
Faro, C.4
-
43
-
-
46749102062
-
Widespread tissue expression of nepenthesin-like aspartic protease genes in Arabidopsis thaliana
-
10.1016/j.plaphy.2008.04.007, 18514539
-
Takahashi K, Niwa H, Yokota N, Kubota K, Inoue H. Widespread tissue expression of nepenthesin-like aspartic protease genes in Arabidopsis thaliana. Plant Physiol Biochem 2008, 46:724-729. 10.1016/j.plaphy.2008.04.007, 18514539.
-
(2008)
Plant Physiol Biochem
, vol.46
, pp. 724-729
-
-
Takahashi, K.1
Niwa, H.2
Yokota, N.3
Kubota, K.4
Inoue, H.5
-
44
-
-
0031457314
-
Molecular organization of a gene in barley which encodes a protein similar to aspartic protease and its specific expression in nucellar cells during degeneration
-
10.1023/A:1005833207707, 9426602
-
Chen F, Foolad MR. Molecular organization of a gene in barley which encodes a protein similar to aspartic protease and its specific expression in nucellar cells during degeneration. Plant Mol Biol 1997, 35:821-831. 10.1023/A:1005833207707, 9426602.
-
(1997)
Plant Mol Biol
, vol.35
, pp. 821-831
-
-
Chen, F.1
Foolad, M.R.2
-
45
-
-
0031225204
-
A novel protein with DNA binding activity from tobacco chloroplast nucleoids
-
157042, 9338968
-
Nakano T, Murakami S, Shoji T, Yoshida S, Yamada Y, Sato F. A novel protein with DNA binding activity from tobacco chloroplast nucleoids. Plant Cell 1997, 9:1673-1682. 157042, 9338968.
-
(1997)
Plant Cell
, vol.9
, pp. 1673-1682
-
-
Nakano, T.1
Murakami, S.2
Shoji, T.3
Yoshida, S.4
Yamada, Y.5
Sato, F.6
-
46
-
-
23944472349
-
Characterization of plasmepsin V, a membrane-bound aspartic protease homolog in the endoplasmic reticulum of Plasmodium falciparum
-
10.1016/j.molbiopara.2005.05.015, 16024107
-
Klemba M, Goldberg DE. Characterization of plasmepsin V, a membrane-bound aspartic protease homolog in the endoplasmic reticulum of Plasmodium falciparum. Mol Biochem Parasitol 2005, 143:183-191. 10.1016/j.molbiopara.2005.05.015, 16024107.
-
(2005)
Mol Biochem Parasitol
, vol.143
, pp. 183-191
-
-
Klemba, M.1
Goldberg, D.E.2
-
47
-
-
48049119706
-
Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance
-
Birch PRJ, Boevink PC, Gilroy EM, Hein I, Pritchard L, Whisson SC. Oomycete RXLR effectors: delivery, functional redundancy and durable disease resistance. Curr Opin Cell Biol 2008, 11:373-379.
-
(2008)
Curr Opin Cell Biol
, vol.11
, pp. 373-379
-
-
Birch, P.R.J.1
Boevink, P.C.2
Gilroy, E.M.3
Hein, I.4
Pritchard, L.5
Whisson, S.C.6
-
48
-
-
55549122238
-
Effector trafficking: RXLR-dEER as extra gear for delivery into plant cells
-
10.1105/tpc.108.062075, 2518235, 18647825
-
Govers F, Bouwmeester K. Effector trafficking: RXLR-dEER as extra gear for delivery into plant cells. Plant Cell 2008, 20:1728-1730. 10.1105/tpc.108.062075, 2518235, 18647825.
-
(2008)
Plant Cell
, vol.20
, pp. 1728-1730
-
-
Govers, F.1
Bouwmeester, K.2
-
49
-
-
54849416178
-
RXLR-mediated entry of Phytophthora sojae effector Avr1b into soybean cells does not require pathogen-encoded machinery
-
10.1105/tpc.107.056093, 2518231, 18621946
-
Dou D, Kale SD, Wang X, Jiang RHY, Bruce NA, Arredondo FD, Zhang X, Tyler BM. RXLR-mediated entry of Phytophthora sojae effector Avr1b into soybean cells does not require pathogen-encoded machinery. Plant Cell 2008, 20:1930-1947. 10.1105/tpc.107.056093, 2518231, 18621946.
-
(2008)
Plant Cell
, vol.20
, pp. 1930-1947
-
-
Dou, D.1
Kale, S.D.2
Wang, X.3
Jiang, R.H.Y.4
Bruce, N.A.5
Arredondo, F.D.6
Zhang, X.7
Tyler, B.M.8
-
50
-
-
58149293042
-
Entering and breaking: virulence effector proteins of oomycete plant pathogens
-
10.1111/j.1462-5822.2008.01240.x, 18783481
-
Tyler BM. Entering and breaking: virulence effector proteins of oomycete plant pathogens. Cell Microbiol 2009, 11:13-20. 10.1111/j.1462-5822.2008.01240.x, 18783481.
-
(2009)
Cell Microbiol
, vol.11
, pp. 13-20
-
-
Tyler, B.M.1
-
51
-
-
67649277651
-
A newly discovered protein export machine in malaria parasites
-
10.1038/nature08104, 2725363, 19536257
-
de Koning-Ward TF, Gilson PR, Boddey JA, Rug M, Smith BJ, Papenfuss AT, Sanders PR, Lundie RJ, Maier AG, Cowman AF, Crabb BS. A newly discovered protein export machine in malaria parasites. Nature 2009, 459:945-949. 10.1038/nature08104, 2725363, 19536257.
-
(2009)
Nature
, vol.459
, pp. 945-949
-
-
de Koning-Ward, T.F.1
Gilson, P.R.2
Boddey, J.A.3
Rug, M.4
Smith, B.J.5
Papenfuss, A.T.6
Sanders, P.R.7
Lundie, R.J.8
Maier, A.G.9
Cowman, A.F.10
Crabb, B.S.11
-
52
-
-
38749105868
-
The MEROPS batch BLAST: a tool to detect peptidases their and non-peptidase homologues in a genome
-
10.1016/j.biochi.2007.09.014, 17980477
-
Rawlings ND, Morton FR. The MEROPS batch BLAST: a tool to detect peptidases their and non-peptidase homologues in a genome. Biochimie 2008, 90:243-259. 10.1016/j.biochi.2007.09.014, 17980477.
-
(2008)
Biochimie
, vol.90
, pp. 243-259
-
-
Rawlings, N.D.1
Morton, F.R.2
-
53
-
-
75549090603
-
The Pfam protein families database
-
10.1093/nar/gkp985, 2808889, 19920124
-
Finn RD, Mistry J, Tate J, Coggill P, Heger A, Pollington JE, Gavin OL, Gunasekaran P, Ceric G, Forslund K, Holm L, Sonnhammer EL, Eddy SR, Bateman A. The Pfam protein families database. Nucl Acids Res 2010, 38:D211-222. 10.1093/nar/gkp985, 2808889, 19920124.
-
(2010)
Nucl Acids Res
, vol.38
-
-
Finn, R.D.1
Mistry, J.2
Tate, J.3
Coggill, P.4
Heger, A.5
Pollington, J.E.6
Gavin, O.L.7
Gunasekaran, P.8
Ceric, G.9
Forslund, K.10
Holm, L.11
Sonnhammer, E.L.12
Eddy, S.R.13
Bateman, A.14
-
54
-
-
3242891271
-
ConPred II: a consensus prediction method for obtaining transmembrane topology models with high reliability
-
10.1093/nar/gkh380, 441518, 15215417
-
Arai M, Mitsuke H, Ikeda M, Xia JX, Kikuchi T, Satake M, Shimizu T. ConPred II: a consensus prediction method for obtaining transmembrane topology models with high reliability. Nucl Acids Res 2004, 32:W390-393. 10.1093/nar/gkh380, 441518, 15215417.
-
(2004)
Nucl Acids Res
, vol.32
-
-
Arai, M.1
Mitsuke, H.2
Ikeda, M.3
Xia, J.X.4
Kikuchi, T.5
Satake, M.6
Shimizu, T.7
-
55
-
-
0034899781
-
Evaluation of methods for the prediction of membrane spanning regions
-
10.1093/bioinformatics/17.7.646, 11448883
-
Moller S, Croning MDR, Apweiler R. Evaluation of methods for the prediction of membrane spanning regions. Bioinformatics 2001, 17:646-653. 10.1093/bioinformatics/17.7.646, 11448883.
-
(2001)
Bioinformatics
, vol.17
, pp. 646-653
-
-
Moller, S.1
Croning, M.D.R.2
Apweiler, R.3
-
56
-
-
3242878402
-
PRED-GPCR: GPCR recognition and family classification server
-
10.1093/nar/gkh431, 441569, 15215415
-
Papasaikas PK, Bagos PG, Litou ZI, Promponas VJ, Hamodrakas SJ. PRED-GPCR: GPCR recognition and family classification server. Nucl Acids Res 2004, 32:W380-382. 10.1093/nar/gkh431, 441569, 15215415.
-
(2004)
Nucl Acids Res
, vol.32
-
-
Papasaikas, P.K.1
Bagos, P.G.2
Litou, Z.I.3
Promponas, V.J.4
Hamodrakas, S.J.5
-
57
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
10.1006/jmbi.2000.4042, 10964570
-
Notredame C, Higgins DG, Heringa J. T-Coffee: A novel method for fast and accurate multiple sequence alignment. J Mol Biol 2000, 302:205-217. 10.1006/jmbi.2000.4042, 10964570.
-
(2000)
J Mol Biol
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
58
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S, Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. System Biol 2003, 52:696-704.
-
(2003)
System Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
59
-
-
0000122573
-
PHYLIP - Phylogeny Inference Package (Version 3.2)
-
Felsenstein J. PHYLIP - Phylogeny Inference Package (Version 3.2). Cladistics 1989, 5:164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
60
-
-
38649092410
-
Dendroscope: An interactive viewer for large phylogenetic trees
-
10.1186/1471-2105-8-460, 2216043, 18034891
-
Huson DH, Richter DC, Rausch C, Dezulian T, Franz M, Rupp R. Dendroscope: An interactive viewer for large phylogenetic trees. BMC Bioinformatics 2007, 8:460. 10.1186/1471-2105-8-460, 2216043, 18034891.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 460
-
-
Huson, D.H.1
Richter, D.C.2
Rausch, C.3
Dezulian, T.4
Franz, M.5
Rupp, R.6
|