Two-dimensional packing of short DNA with nonpairing overhangs in cationic liposome-DNA complexes: From onsager nematics to columnar nematics with finite-length columns

Journal of the American Chemical Society

Volumn 133, Issue 19, 2011, Pages 7585-7595

  Bouxsein, Nathan F ^a,b   Leal, Cecília ^a,b   McAllister, Christopher S ^b,c   Ewert, Kai K ^a,b   Li, Youli ^b   Samuel, Charles E ^b   Safinya, Cyrus R ^a,b  

^a University of California   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BUILDING BLOCKES; DNA-DIRECTED ASSEMBLY; DOUBLE STRANDED DNA; GENE SILENCING; I-PHASE; LIQUID-CRYSTALLINE; NANOPARTICLE MEMBRANES; NEMATICS; ONSAGER; ONSAGER'S THEORY; RIGID RODS; SHAPE ANISOTROPY; STACKING INTERACTION; SYNCHROTRON SMALL-ANGLE X-RAY SCATTERINGS; TWO-DIMENSIONAL PACKING;

ANISOTROPY; COMPLEXATION; GENES; GENETIC ENGINEERING; LIPID BILAYERS; NANOPARTICLES; TITRATION; TWO DIMENSIONAL; X RAY SCATTERING;

DNA;

CATIONIC LIPOSOME; DNA; LIPOSOME; NANOPARTICLE; SINGLE STRANDED DNA; THYMINE; UNCLASSIFIED DRUG;

ANISOTROPY; ARTICLE; COMPLEX FORMATION; DNA STRUCTURE; LIPID BILAYER; MOLECULAR INTERACTION; RADIATION SCATTERING; SYNCHROTRON;

CATIONS; DNA; LIPOSOMES; LIQUID CRYSTALS; MODELS, BIOLOGICAL;

EID: 79955909116     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja202082c     Document Type: Article

References (46)

1. De Gennes, P. G.; Prost, J. The Physics of Liquid Crystals, 2 nd ed.; Oxford University Press: Oxford, 1993.
2. Chaikin, P. M.; Lubensky, T. C. Principles of Condensed Matter Physics; Cambridge University Press: Cambridge, 1995.
3. Bouxsein, N. F.; McAllister, C. S.; Ewert, K. K.; Samuel, C. E.; Safinya, C. R. Biochemistry 2007, 46, 4785-4792
4. Ewert, K. K.; Zidovska, A.; Ahmad, A.; Bouxsein, N. F.; Evans, H. M.; McAllister, C. S.; Samuel, C. E.; Safinya, C. R. Top. Curr. Chem. 2010, 296, 191-226
5. Rädler, J. O.; Koltover, I.; Salditt, T.; Safinya, C. R. Science 1997, 275, 810-814
6. Lin, A. J.; Slack, N. L.; Ahmad, A.; George, C. X.; Samuel, C. E.; Safinya, C. R. Biophys. J. 2003, 84, 3307-3316
7. Salditt, T.; Koltover, I.; Rädler, J.; Safinya, C. R. Phys. Rev. Lett. 1997, 79, 2582-2585
8. Salditt, T.; Koltover, I.; Rädler, J. O.; Safinya, C. R. Phys. Rev. E 1998, 58, 889-904
9. Koltover, I.; Salditt, T.; Safinya, C. R. Biophys. J. 1999, 77, 915-924
10. Zidovska, A.; Evans, H. M.; Ahmad, A.; Ewert, K. K.; Safinya, C. R. J. Phys. Chem. 2009, 113, 5208-5216
11. Onsager, L. Ann. N.Y. Acad. Sci. 1949, 51, 627-659
12. Bolhuis, P.; Frenkel, D. J. Chem. Phys. 1997, 106, 666-685
13. Cuesta, J. A.; Frenkel, D. Phys. Rev. A 1990, 42, 2126-2136
14. Bates, M.; Frenkel, D. J. Chem. Phys. 2000, 112, 10034-10041
15. Nakata, M.; Zanchetta, G.; Chapman, B. D.; Jones, C. D.; Cross, J. O.; Pindak, R.; Bellini, T.; Clark, N. A. Science 2007, 318, 1276-1279
16. Zanchetta, G.; Bellini, T.; Nakata, M.; Clark, N. A. J. Am. Chem. Soc. 2008, 130, 12864-12865
17. Strzelecka, T. E.; Davidson, M. W.; Rill, R. L. Nature 1988, 331, 457-460
18. Livolant, F.; Levelut, A. M.; Doucet, J.; Benoit, J. P. Nature 1989, 339, 724-726
19. Delivery Technologies for Biopharmaceuticals: Peptides, Proteins, Nucleic Acids and Vaccines; Jorgensen, L.; Nielsen, H. M., Eds.; John Wiley & Sons: New York, 2009.
20. Kim, D.-H.; Behlke, M. A.; Rose, S. D.; Chang, M.-S.; Choi, S.; Rossi, J. J. Nat. Biotechnol. 2005, 23, 222-226
21. Mirkin, C. A.; Letsinger, R. L.; Mucic, R. C.; Stohrhoff, J. J. Nature 1996, 382, 607-609
22. Elghanian, R.; Stohrhoff, J. J.; Mucic, R. C.; Letsinger, R. L.; Mirkin, C. A. Science 1997, 277, 1078-1081
23. Nykypanchuk, D.; Maye, M. M.; van der Lelie, D.; Gang, O. Nature 2008, 451, 549-552
24. Maye, M. M.; Nykypanchuk, D.; van der Lelie, D.; Gang, O. J. Am. Chem. Soc. 2006, 128, 14020-14021
25. Seeman, N. C. Nature 2003, 421, 427-431
26. Elbashir, S. M.; Harborth, J.; Lendeckel, W.; Yalcin, A.; Weber, K.; Tuschl, T. Nature 2001, 411, 494-498
27. Caille, C. R. C. R. Seances Acad. Sci., Ser. B 1972, 274, 891-893
28. Als-Nielsen, J.; Litster, J. D.; Birgeneau, R. J.; Kaplan, M.; Safinya, C. R.; Lindegaardandersen, A.; Mathiesen, S. Phys. Rev. B 1980, 22, 312-320
29. Safinya, C. R.; Roux, D.; Smith, G. S.; Sinha, S. K.; Dimon, P.; Clark, N. A.; Bellocq, A. M. Phys. Rev. Lett. 1986, 57, 2718-2721
30. Landau, L. D. In Collected Papers of L. D. Landau; Ter Haar, D., Ed.; Gordon and Breach: New York, 1965.
31. Peierls, R. E. Helv. Phys. Acta Suppl. 1934, 7, 81-83
32. Davidov, D.; Safinya, C. R.; Kaplan, M.; Dana, S. S.; Schaetzing, R.; Birgeneau, R. J.; Litster, J. D. Phys. Rev. B 1979, 19, 1657-1663
33. Garland, C. W.; Meichle, M.; Ocko, B. M.; Kortan, A. R.; Safinya, C. R.; Yu, L. J.; Litster, J. D.; Birgeneau, R. J. Phys. Rev. A 1983, 27, 3234-3240
34. Safinya, C. R.; Birgeneau, R. J.; Litster, J. D.; Neubert, M. E. Phys. Rev. Lett. 1981, 47, 668-671
35. Ahmad, A.; Evans, H. M.; Ewert, K.; George, C. X.; Samuel, C. E.; Safinya, C. R. J. Gene Med. 2005, 7, 739-748
36. Bruinsma, R. Eur. Phys. J. B. 1998, 4, 75-88
37. Leal, C.; Bouxsein, N. F.; Ewert, K. K.; Safinya, C. R. J. Am. Chem. Soc. 2010, 132, 16841-16847
38. Samuel, C. E. Clin. Microbiol. Rev. 2001, 14, 778-809
39. Artzner, F.; Zantl, R.; Rapp, G.; Rädler, J. Phys. Rev. Lett. 1998, 81, 5015-5018
40. Harries, D.; May, S.; Gelbart, W. M.; Ben-Shaul, A. Biophys. J. 1998, 75, 159-173
41. Golubović, L.; Golubović, M. Phys. Rev. Lett. 1998, 80, 4341-4344
42. O'Hern, C.; Lubensky, T. Phys. Rev. Lett. 1998, 80, 4345-4348
43. Golubović, L.; Lubensky, T.; O'Hern, C. Phys. Rev. E 2000, 62, 1069-1094
44. May, S.; Harries, D.; Ben-Shaul, A. Biophys. J. 2000, 78, 1681-1697
45. Harries, D.; May, S.; Ben-Shaul, A. J. Phys. Chem. B 2003, 107, 3624-3630
46. Farago, O.; Grønbech-Jensen, N. J. Am. Chem. Soc. 2009, 131, 2875-2881