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Volumn 30, Issue 1, 2011, Pages 27-40

A systems biological approach to identify key transcription factors and their genomic neighborhoods in human sarcomas

Author keywords

Binding motif; Gene regulation; Sarcoma; Systems biology; Transcription factor

Indexed keywords

COILED COIL DOMAIN CONTAINING 6 PROTEIN; LYMPHOID ENHANCER FACTOR 1; MEMBRANE PROTEIN; MYC PROTEIN; SERUM RESPONSE FACTOR; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR MAF; TRANSCRIPTION FACTOR NKX2.5; TRIPARTITE MOTIF CONTAINING 63 PROTEIN; UNCLASSIFIED DRUG; VITAMIN D RECEPTOR; ZINC FINGER PROTEIN; ZINC FINGER PROTEIN 350;

EID: 79954551932     PISSN: 1000467X     EISSN: 1944446X     Source Type: Journal    
DOI: 10.5732/cjc.010.10541     Document Type: Article
Times cited : (5)

References (64)
  • 1
    • 0037157786 scopus 로고    scopus 로고
    • Cancer genetics [J]
    • Knudson AG. Cancer genetics [J]. Am J Med Genet, 2002,111(1):96-102.
    • (2002) Am J Med Genet , vol.111 , Issue.1 , pp. 96-102
    • Knudson, A.G.1
  • 2
    • 0034176798 scopus 로고    scopus 로고
    • DNA hypermethylation in tumorigenesis: Epigenetics joins genetics [J]
    • Baylin SB, Herman JG. DNA hypermethylation in tumorigenesis: epigenetics joins genetics [J]. Trends Genet, 2000,16(4):168-174.
    • (2000) Trends Genet , vol.16 , Issue.4 , pp. 168-174
    • Baylin, S.B.1    Herman, J.G.2
  • 3
    • 0034744639 scopus 로고    scopus 로고
    • Aberrant patterns of DNA methylatlon, chromatin formation and gene expression in cancer [J]
    • Baylin SB, Esteller M, Rountree MR, et al. Aberrant patterns of DNA methylatlon, chromatin formation and gene expression in cancer [J]. Hum Mol Genet, 2001,10(7):687-692.
    • (2001) Hum Mol Genet , vol.10 , Issue.7 , pp. 687-692
    • Baylin, S.B.1    Esteller, M.2    Rountree, M.R.3
  • 4
    • 21344470650 scopus 로고    scopus 로고
    • A single nucleotide polymorphism In the MDM2 gene: From a molecular and cellular explanation to clinical effect [J]
    • Bond GL, Hu W, Levlne A. A single nucleotide polymorphism In the MDM2 gene: from a molecular and cellular explanation to clinical effect [J]. Cancer Res, 2005,65(13):5481-5484.
    • (2005) Cancer Res , vol.65 , Issue.13 , pp. 5481-5484
    • Bond, G.L.1    Hu, W.2    Levlne, A.3
  • 5
    • 18544365698 scopus 로고    scopus 로고
    • Gene-expression profiles predict survival of patients with lung adenocarcinoma [J]
    • Beer DG, Kardla SL, Huang CC, et al. Gene-expression profiles predict survival of patients with lung adenocarcinoma [J]. Nat Med, 2002,8(8):816-824.
    • (2002) Nat Med , vol.8 , Issue.8 , pp. 816-824
    • Beer, D.G.1    Kardla, S.L.2    Huang, C.C.3
  • 6
    • 0035923521 scopus 로고    scopus 로고
    • Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses [J]
    • Bhattacharjee A, Richards WG, Staunton J, et al. Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses [J]. Proc Nati Acad Sei USA, 2001,98(24):13790-13795.
    • (2001) Proc Nati Acad Sei USA , vol.98 , Issue.24 , pp. 13790-13795
    • Bhattacharjee, A.1    Richards, W.G.2    Staunton, J.3
  • 7
    • 33746882054 scopus 로고    scopus 로고
    • Gene expression profiling of acute myeloid leukemia with translocation t (8;16)(p11;p13) and MYST3-CREBBP rearrangement reveals a distinctive signature with a specific pattern of HOX gene expression [J]
    • Camós M, Esteve J, Jares P, et al. Gene expression profiling of acute myeloid leukemia with translocation t (8;16)(p11;p13) and MYST3-CREBBP rearrangement reveals a distinctive signature with a specific pattern of HOX gene expression [J].Cancer Res, 2006,66(14):6947-6954.
    • (2006) Cancer Res , vol.66 , Issue.14 , pp. 6947-6954
    • Camós, M.1    Esteve, J.2    Jares, P.3
  • 8
    • 20144386127 scopus 로고    scopus 로고
    • Robustness, scalability, and Integration of a wound-response gene expression signature In predicting breast cancer survival [J]
    • Chang HY, Nuyten DS, Sneddon JB, et al. Robustness, scalability, and Integration of a wound-response gene expression signature In predicting breast cancer survival [J]. Proc Nati Acad Sei USA, 2005,102(10):3738-3743.
    • (2005) Proc Nati Acad Sei USA , vol.102 , Issue.10 , pp. 3738-3743
    • Chang, H.Y.1    Nuyten, D.S.2    Sneddon, J.B.3
  • 9
    • 33947225176 scopus 로고    scopus 로고
    • Identification of candidate molecular markers predicting sensitivity in solid tumors to dasatlnib: Rationale for patient selection [J]
    • Huang F, Reeves K, Han X, et al. Identification of candidate molecular markers predicting sensitivity in solid tumors to dasatlnib: rationale for patient selection [J]. Cancer Res, 2007,67(5):2226-2238.
    • (2007) Cancer Res , vol.67 , Issue.5 , pp. 2226-2238
    • Huang, F.1    Reeves, K.2    Han, X.3
  • 10
    • 0742299049 scopus 로고    scopus 로고
    • Finding strong gene sets for classification of gliomas [J]
    • Kim S, Dougherty ER, Shmulevlch I, et al. Finding strong gene sets for classification of gliomas [J]. Mol Cancer Ther, 2002,1: 1229-1236.
    • (2002) Mol Cancer Ther , vol.1 , pp. 1229-1236
    • Kim, S.1    Dougherty, E.R.2    Shmulevlch, I.3
  • 11
    • 0037229674 scopus 로고    scopus 로고
    • Microarray reveals differences In both tumors and vascular specific gene expression In de novo CD5 * and CD5 diffuse large B-cell lymphomas [J]
    • Kobayashi T, Yamaguchi M, Kim S, et al. Microarray reveals differences In both tumors and vascular specific gene expression In de novo CD5 * and CD5 diffuse large B-cell lymphomas [J]. Cancer Res, 2003,63(1):60-66.
    • (2003) Cancer Res , vol.63 , Issue.1 , pp. 60-66
    • Kobayashi, T.1    Yamaguchi, M.2    Kim, S.3
  • 12
    • 0037443891 scopus 로고    scopus 로고
    • Ollgonucleotlde microarray for prediction of early ¡ntrahepatlc recurrence of hepatocellular carcinoma after curative resection [J]
    • llzuka N, Oka M, Yamada-Okabe H, et al. Ollgonucleotlde microarray for prediction of early ¡ntrahepatlc recurrence of hepatocellular carcinoma after curative resection [J]. Lancet, 2003,361 (9361):923-929.
    • (2003) Lancet , vol.361 , Issue.9361 , pp. 923-929
    • Llzuka, N.1    Oka, M.2    Yamada-Okabe, H.3
  • 13
    • 0037165140 scopus 로고    scopus 로고
    • Prediction of central nervous system embryonal tumour outcome based on gene expression [J]
    • Pomeroy SL, Tamayo P, Gaasenbeek M, et al. Prediction of central nervous system embryonal tumour outcome based on gene expression [J]. Nature, 2002,415(6870):436-442.
    • (2002) Nature , vol.415 , Issue.6870 , pp. 436-442
    • Pomeroy, S.L.1    Tamayo, P.2    Gaasenbeek, M.3
  • 14
    • 0037226593 scopus 로고    scopus 로고
    • A molecular signature of metastasis In primary solid tumors [J]
    • Ramaswamy S, Ross KN, Lander ES, et al. A molecular signature of metastasis In primary solid tumors [J]. Nat Genet, 2003,33(1):49-54.
    • (2003) Nat Genet , vol.33 , Issue.1 , pp. 49-54
    • Ramaswamy, S.1    Ross, K.N.2    Lander, E.S.3
  • 15
    • 0037142053 scopus 로고    scopus 로고
    • The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma [J]
    • Rosenwald A, Wright G, Chan WC, et al. The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma [J]. N Engl J Med, 2002,346(25):1937-1947.
    • (2002) N Engl J Med , vol.346 , Issue.25 , pp. 1937-1947
    • Rosenwald, A.1    Wright, G.2    Chan, W.C.3
  • 16
    • 18244409687 scopus 로고    scopus 로고
    • Gene expression profiling predicts clinical outcome of breast cancer [J]
    • van't Veer LJ, Dal H, van de Vljver MJ, et al. Gene expression profiling predicts clinical outcome of breast cancer [J]. Nature, 2002,415(6871):530-536.
    • (2002) Nature , vol.415 , Issue.6871 , pp. 530-536
    • van't Veer, L.J.1    Dal, H.2    van de Vljver, M.J.3
  • 17
    • 0037137519 scopus 로고    scopus 로고
    • A gene-expression signature as a predictor of survival In breast cancer [J]
    • van de Vljver MJ, He YD, van't Veer LJ, et al. A gene-expression signature as a predictor of survival In breast cancer [J]. N Engl J Med, 2002,347(25): 1999-2009.
    • (2002) N Engl J Med , vol.347 , Issue.25 , pp. 1999-2009
    • van de Vljver, M.J.1    He, Y.D.2    van't Veer, L.J.3
  • 18
    • 13844310310 scopus 로고    scopus 로고
    • Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer [J]
    • Wang Y, Klijn JG, Zhang Y, et al. Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer [J]. Lancet, 2005,365(9460):671-679.
    • (2005) Lancet , vol.365 , Issue.9460 , pp. 671-679
    • Wang, Y.1    Klijn, J.G.2    Zhang, Y.3
  • 19
    • 19044399684 scopus 로고    scopus 로고
    • Classification, subtype discovery, and prediction of outcome In pédiatrie acute lymphoblastlc leukemia by gene expression profiling [J]
    • Yeoh EJ, Ross ME, Shurtleff SA, et al. Classification, subtype discovery, and prediction of outcome In pédiatrie acute lymphoblastlc leukemia by gene expression profiling [J]. Cancer Cell, 2002,1(2):133-143.
    • (2002) Cancer Cell , vol.1 , Issue.2 , pp. 133-143
    • Yeoh, E.J.1    Ross, M.E.2    Shurtleff, S.A.3
  • 20
    • 0037076322 scopus 로고    scopus 로고
    • Selection bias In gene extraction on the basis of microarray gene-expression data [J]
    • Ambrolse C, McLachlan GJ. Selection bias In gene extraction on the basis of microarray gene-expression data [J]. Proc Nati Acad Sei USA, 2002,99(10):6562-6566.
    • (2002) Proc Nati Acad Sei USA , vol.99 , Issue.10 , pp. 6562-6566
    • Ambrolse, C.1    McLachlan, G.J.2
  • 21
    • 1642349616 scopus 로고    scopus 로고
    • Genomlc medicine. Gene expression tests foretell breast cancer's future [J]
    • Garber K. Genomlc medicine. Gene expression tests foretell breast cancer's future [J]. Science, 2004,303 (5665):1754-1755.
    • (2004) Science , vol.303 , Issue.5665 , pp. 1754-1755
    • Garber, K.1
  • 22
    • 13444249852 scopus 로고    scopus 로고
    • Prediction of cancer outcome with mlcroarrays: A multiple random validation strategy [J]
    • Mlchlels S, Kosclelny S, Hill C. Prediction of cancer outcome with mlcroarrays: a multiple random validation strategy [J]. Lancet, 2005,365(9458):488-492
    • (2005) Lancet , vol.365 , Issue.9458 , pp. 488-492
    • Mlchlels, S.1    Kosclelny, S.2    Hill, C.3
  • 23
    • 0012949538 scopus 로고    scopus 로고
    • Optimal gene expression analysis by mlcroarrays [J]
    • Miller LD, Long PM, Wong L, et al. Optimal gene expression analysis by mlcroarrays [J]. Cancer Cell, 2002,2(5):353-361.
    • (2002) Cancer Cell , vol.2 , Issue.5 , pp. 353-361
    • Miller, L.D.1    Long, P.M.2    Wong, L.3
  • 24
    • 0344441000 scopus 로고    scopus 로고
    • Diagnostic and prognostic prediction using gene expression profiles In high-dlmenslonal microarray data [J]
    • Simon R. Diagnostic and prognostic prediction using gene expression profiles In high-dlmenslonal microarray data [J]. Br J Cancer, 2003,89(9):1599-1604.
    • (2003) Br J Cancer , vol.89 , Issue.9 , pp. 1599-1604
    • Simon, R.1
  • 25
    • 27544459288 scopus 로고    scopus 로고
    • A protocol for building and evaluating predictors of disease state based on microarray data [J]
    • Wessels LFA, Relnders MJT, Hart AAM, et al. A protocol for building and evaluating predictors of disease state based on microarray data [J]. Blolnformatlcs, 2005,21 (19):3755-3762.
    • (2005) Blolnformatlcs , vol.21 , Issue.19 , pp. 3755-3762
    • Wessels, L.F.A.1    Relnders, M.J.T.2    Hart, A.A.M.3
  • 26
    • 75149195336 scopus 로고    scopus 로고
    • The transcrlptlonal network for mesenchymal transformation of brain tumours [J]
    • Carro MS, Llm WK, Alvarez MJ, et al. The transcrlptlonal network for mesenchymal transformation of brain tumours [J]. Nature, 2010,464(7279):318-325.
    • (2010) Nature , vol.464 , Issue.7279 , pp. 318-325
    • Carro, M.S.1    Llm, W.K.2    Alvarez, M.J.3
  • 27
    • 0037941536 scopus 로고    scopus 로고
    • Gene expression phenotyplc models that predict the activity of oncogenlc pathways [J]
    • Huang E, Ishlda S, Plttman J, et al. Gene expression phenotyplc models that predict the activity of oncogenlc pathways [J]. Nat Genet, 2003,34(2):226-230.
    • (2003) Nat Genet , vol.34 , Issue.2 , pp. 226-230
    • Huang, E.1    Ishlda, S.2    Plttman, J.3
  • 28
    • 0042354669 scopus 로고    scopus 로고
    • A mechanism of cyclln D1 action encoded In the patterns of gene expression In human cancer [J]
    • Lamb J, Ramaswamy S, Ford HL, et al. A mechanism of cyclln D1 action encoded In the patterns of gene expression In human cancer [J]. Cell, 2003,114(3):323-324.
    • (2003) Cell , vol.114 , Issue.3 , pp. 323-324
    • Lamb, J.1    Ramaswamy, S.2    Ford, H.L.3
  • 29
    • 0038054341 scopus 로고    scopus 로고
    • PGC-1alpha- responslve genes Involved In oxldatlve phosphorylatlon are coordlnately downregulared In human diabetes [J]
    • Mootha VK, Llndgren CM, Eriksson KF, et al. PGC-1alpha- responslve genes Involved In oxldatlve phosphorylatlon are coordlnately downregulared In human diabetes [J]. Nat Genet, 2003,34(3):267-274.
    • (2003) Nat Genet , vol.34 , Issue.3 , pp. 267-274
    • Mootha, V.K.1    Llndgren, C.M.2    Eriksson, K.F.3
  • 30
    • 3042694117 scopus 로고    scopus 로고
    • Large-scale meta-analysls of cancer microarray data Identifies common transcrlptlonal profiles of neoplastlc transformation and progression [J]
    • Rhodes DR, Yu J, Shanker K, et al. Large-scale meta-analysls of cancer microarray data Identifies common transcrlptlonal profiles of neoplastlc transformation and progression [J]. Proc Nati Acad Scl USA, 2004,101(25):9309-9314.
    • (2004) Proc Nati Acad Scl USA , vol.101 , Issue.25 , pp. 9309-9314
    • Rhodes, D.R.1    Yu, J.2    Shanker, K.3
  • 31
    • 6944244084 scopus 로고    scopus 로고
    • A module map showing conditional activity of expression modules In cancer [J]
    • Segal E, Friedman N, Koller D, et al. A module map showing conditional activity of expression modules In cancer [J]. Nat Genet, 2004,36(10):1090-1098.
    • (2004) Nat Genet , vol.36 , Issue.10 , pp. 1090-1098
    • Segal, E.1    Friedman, N.2    Koller, D.3
  • 32
    • 20044388557 scopus 로고    scopus 로고
    • From signatures to models: Understanding cancer using mlcroarrays [J]
    • Segal E, Friedman N, Kamlnskl N, et al. From signatures to models: understanding cancer using mlcroarrays [J]. Nat Genet, 2005,37(Suppl):S38-S45.
    • (2005) Nat Genet , vol.37 , Issue.SUPPL.
    • Segal, E.1    Friedman, N.2    Kamlnskl, N.3
  • 33
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: Tool for the unification of biology [J]
    • The Gene Ontology Consortium
    • The Gene Ontology Consortium. Gene ontology: tool for the unification of biology [J]. Nat Genet, 2000,25(1):25-29.
    • (2000) Nat Genet , vol.25 , Issue.1 , pp. 25-29
  • 34
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes [J]
    • Kanehlsa M, Goto S. KEGG: Kyoto Encyclopedia of Genes and Genomes [J]. Nucleic Adds Res, 2000,28(1):27-30.
    • (2000) Nucleic Adds Res , vol.28 , Issue.1 , pp. 27-30
    • Kanehlsa, M.1    Goto, S.2
  • 36
    • 4043181214 scopus 로고    scopus 로고
    • Cancer genes and the pathways they control [J]
    • Vogelsteln B, Klnzler K. Cancer genes and the pathways they control [J]. Nat Med, 2004,10(8):789-799.
    • (2004) Nat Med , vol.10 , Issue.8 , pp. 789-799
    • Vogelsteln, B.1    Klnzler, K.2
  • 37
    • 0035845511 scopus 로고    scopus 로고
    • Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical Implications [J]
    • Stfrlle T, Pérou CM, Tlbshlranl R, et al. Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical Implications [J]. Proc Nati Acad Scl USA, 2001,98(19):10869-10874.
    • (2001) Proc Nati Acad Scl USA , vol.98 , Issue.19 , pp. 10869-10874
    • Stfrlle, T.1    Pérou, C.M.2    Tlbshlranl, R.3
  • 38
    • 73649123907 scopus 로고    scopus 로고
    • Integrated genomlc analysis Identifies clinically relevant subtypes of glloblastoma characterized by abnormalities In PDGFRA, IDH1, EGFR, and NF1 [J]
    • Verhaak RG, Hoadley KA, Purdom E, et al. Integrated genomlc analysis Identifies clinically relevant subtypes of glloblastoma characterized by abnormalities In PDGFRA, IDH1, EGFR, and NF1 [J]. Cancer Cell, 2010,17(1):98-110.
    • (2010) Cancer Cell , vol.17 , Issue.1 , pp. 98-110
    • Verhaak, R.G.1    Hoadley, K.A.2    Purdom, E.3
  • 39
    • 34547474942 scopus 로고    scopus 로고
    • Insulln-IIke growth factor binding protein 2 promotes glloma development and progression [J]
    • Dunlap SM, Celestino J, Wang H, et al. Insulln-IIke growth factor binding protein 2 promotes glloma development and progression [J]. Proc Nati Acad Scl USA, 2007,104(28): 11736-11741.
    • (2007) Proc Nati Acad Scl USA , vol.104 , Issue.28 , pp. 11736-11741
    • Dunlap, S.M.1    Celestino, J.2    Wang, H.3
  • 40
    • 34447557780 scopus 로고    scopus 로고
    • NCCN Task Force report: Management of patients with gastrointestinal stromal tumor (GIST) - update of the NCCN clinical practice guidelines [J]
    • Demetrl G, Benjamin R, Blanke C, et al. NCCN Task Force report: management of patients with gastrointestinal stromal tumor (GIST) - update of the NCCN clinical practice guidelines [J]. J Nati Compr Cane Netw, 2007,5(Suppl 2):S1-S29.
    • (2007) J Nati Compr Cane Netw , vol.5 , Issue.SUPPL. 2
    • Demetrl, G.1    Benjamin, R.2    Blanke, C.3
  • 41
    • 33749623419 scopus 로고    scopus 로고
    • Gastrointestinal stromal tumor (GIST) [J]
    • Joensuu H. Gastrointestinal stromal tumor (GIST) [J]. Ann Oncol, 2006,17(Suppl 10):280-286.
    • (2006) Ann Oncol , vol.17 , Issue.SUPPL. 10 , pp. 280-286
    • Joensuu, H.1
  • 42
    • 40549118843 scopus 로고    scopus 로고
    • Gastrointestinal stromal tumors and lelomyosarcomas [J]
    • Katz S, DeMatteo R. Gastrointestinal stromal tumors and lelomyosarcomas [J]. J Surg Oncol, 2008,97(4):350-359.
    • (2008) J Surg Oncol , vol.97 , Issue.4 , pp. 350-359
    • Katz, S.1    Dematteo, R.2
  • 43
    • 0242670019 scopus 로고    scopus 로고
    • Pdgfra activating mutations In gastrointestinal stromal tumors [J]
    • Heinrich M, Corless C, Duenslng A, et al. Pdgfra activating mutations In gastrointestinal stromal tumors [J]. Science, 2003,299(5607):708-710.
    • (2003) Science , vol.299 , Issue.5607 , pp. 708-710
    • Heinrich, M.1    Corless, C.2    Duenslng, A.3
  • 44
    • 38049150540 scopus 로고    scopus 로고
    • Molecular approaches to resolve diagnostic dilemmas: The case of gastrointestinal stromal tumor and lelomyosarcoma [J]
    • Trent JC, Lazar AJ, Zhang W. Molecular approaches to resolve diagnostic dilemmas: the case of gastrointestinal stromal tumor and lelomyosarcoma [J]. Future Oncol, 2007,3(6):629-637.
    • (2007) Future Oncol , vol.3 , Issue.6 , pp. 629-637
    • Trent, J.C.1    Lazar, A.J.2    Zhang, W.3
  • 45
    • 33847665105 scopus 로고    scopus 로고
    • Highly accurate two-gene classifier for differentiating gastrointestinal stromal tumors and lelomyosarcomas [J]
    • Price N, Trent J, El-Naggar A, et al. Highly accurate two-gene classifier for differentiating gastrointestinal stromal tumors and lelomyosarcomas [J]. Proc Nati Acad Scl USA, 2007,104(9): 3414-3419.
    • (2007) Proc Nati Acad Scl USA , vol.104 , Issue.9 , pp. 3414-3419
    • Price, N.1    Trent, J.2    El-Naggar, A.3
  • 46
    • 77952040509 scopus 로고    scopus 로고
    • An Integrated study of aberrant gene copy number and gene expression In GIST and LMS [J]
    • Yang D, Ylipää A, Yang J, et al. An Integrated study of aberrant gene copy number and gene expression In GIST and LMS [J]. Technol Cancer Res Treat, 2010,9(2):171-178.
    • (2010) Technol Cancer Res Treat , vol.9 , Issue.2 , pp. 171-178
    • Yang, D.1    Ylipää, A.2    Yang, J.3
  • 47
    • 84861577614 scopus 로고    scopus 로고
    • Integratlve genomlc characterization and a genomlc staging system for gastrointestinal stromal tumors [J]
    • Sep 3. [Epub ahead of print]
    • Yllp ää A, Hunt K, Yang J, et al. Integratlve genomlc characterization and a genomlc staging system for gastrointestinal stromal tumors [J]. Cancer, 2010 Sep 3. [Epub ahead of print]
    • (2010) Cancer
    • Yllp ää, A.1    Hunt, K.2    Yang, J.3
  • 50
    • 0036191009 scopus 로고    scopus 로고
    • INCLUSIve: Integrated clustering, upstream sequence retrieval and motif sampling [J]
    • Thljs G, Moreau Y, deSmet F, et al. INCLUSIve: Integrated clustering, upstream sequence retrieval and motif sampling [J]. Blolnformatlcs, 2002,18(2):331-332.
    • (2002) Blolnformatlcs , vol.18 , Issue.2 , pp. 331-332
    • Thljs, G.1    Moreau, Y.2    Desmet, F.3
  • 51
    • 63849300612 scopus 로고    scopus 로고
    • A data Integration framework for prediction of transcription factor targets: A BCL6 case study [J]
    • Nykter M, Lähdesmäkl H, Rust A, et al. A data Integration framework for prediction of transcription factor targets: a BCL6 case study [J]. Ann N Y Acad Scl, 2009,1558:205-214.
    • (2009) Ann N Y Acad Scl , vol.1558 , pp. 205-214
    • Nykter, M.1    Lähdesmäkl, H.2    Rust, A.3
  • 52
    • 50849090969 scopus 로고    scopus 로고
    • Genome-wide analysis of transcription factor binding sites based on ChlP-Seq data [J]
    • Valouev A, Johnson DS, Sundqulst A, et al. Genome-wide analysis of transcription factor binding sites based on ChlP-Seq data [J]. Nat Methods, 2008,5(9):829-834.
    • (2008) Nat Methods , vol.5 , Issue.9 , pp. 829-834
    • Valouev, A.1    Johnson, D.S.2    Sundqulst, A.3
  • 53
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome [J]
    • Langmead B, Trapnell C, Pop M, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome [J]. Genome Biol, 2009,10(3):R25.
    • (2009) Genome Biol , vol.10 , Issue.3
    • Langmead, B.1    Trapnell, C.2    Pop, M.3
  • 54
    • 53849146020 scopus 로고    scopus 로고
    • Model-based analysis of ChlP-Seq (MACS) [J]
    • Zhang Y, Liu T, Meyer CA, et al. Model-based analysis of ChlP-Seq (MACS) [J]. Genome Biol, 2008,9(9):R13.
    • (2008) Genome Biol , vol.9 , Issue.9
    • Zhang, Y.1    Liu, T.2    Meyer, C.A.3
  • 55
    • 33846890433 scopus 로고    scopus 로고
    • Serum response factor binding sites differ In three human cell types [J]
    • Cooper SJ, Trlnkleln ND, Nguyen L, et al. Serum response factor binding sites differ In three human cell types [J]. Genome Res, 2007,17(2):136-144.
    • (2007) Genome Res , vol.17 , Issue.2 , pp. 136-144
    • Cooper, S.J.1    Trlnkleln, N.D.2    Nguyen, L.3
  • 56
    • 65549111844 scopus 로고    scopus 로고
    • Strong smooth muscle differentiation Is dependent on myocardln gene amplification In most human retroperltoneal lelomyosarcomas [J]
    • Perot G, Derré J, Colndre JM, et al. Strong smooth muscle differentiation Is dependent on myocardln gene amplification In most human retroperltoneal lelomyosarcomas [J]. Cancer Res, 2009,69(6):2269-2278.
    • (2009) Cancer Res , vol.69 , Issue.6 , pp. 2269-2278
    • Perot, G.1    Derré, J.2    Colndre, J.M.3
  • 57
    • 0034682515 scopus 로고    scopus 로고
    • Association of Smads with lymphold enhancer binding factor 1/T cell-specific factor mediates cooperative signaling by the transforming growth factor-ß and Wnt pathways [J]
    • Labbe E, Letamendla A, Attlsano L. Association of Smads with lymphold enhancer binding factor 1/T cell-specific factor mediates cooperative signaling by the transforming growth factor-ß and Wnt pathways [J]. Proc Nati Acad Sei USA, 2000,97(15):8358-8363.
    • (2000) Proc Nati Acad Sei USA , vol.97 , Issue.15 , pp. 8358-8363
    • Labbe, E.1    Letamendla, A.2    Attlsano, L.3
  • 58
    • 77951675861 scopus 로고    scopus 로고
    • Small molecule Inhibitors of Wnt/ß-Catenln/Lef-1 signaling Induces apoptosls In chronic lymphocytlc leukemia cells In vitro and In vivo [J]
    • Gandhlrajan RK, Stalb PA, Mlnke K, et al. Small molecule Inhibitors of Wnt/ß-Catenln/Lef-1 signaling Induces apoptosls In chronic lymphocytlc leukemia cells In vitro and In vivo [J]. Neoplasla, 2010,12(4):326-335.
    • (2010) Neoplasla , vol.12 , Issue.4 , pp. 326-335
    • Gandhlrajan, R.K.1    Stalb, P.A.2    Mlnke, K.3
  • 59
    • 0942290418 scopus 로고    scopus 로고
    • H4 (D10S170), a gene frequently rearranged with RET In papillary thyroid carcinomas: Functional characterization [J]
    • Celettl A, Cerrato A, Merolla F, et al. H4 (D10S170), a gene frequently rearranged with RET In papillary thyroid carcinomas: functional characterization [J]. Oncogene, 2004,23(1):109-121.
    • (2004) Oncogene , vol.23 , Issue.1 , pp. 109-121
    • Celettl, A.1    Cerrato, A.2    Merolla, F.3
  • 60
    • 0036192061 scopus 로고    scopus 로고
    • The myc oncogene: MarvelouslY Complex [J]
    • Oster SK, Ho CS, Soucie EL, et al. The myc oncogene: MarvelouslY Complex [J]. Adv Cancer Res, 2002,84 81-154.
    • (2002) Adv Cancer Res , vol.84 , pp. 81-154
    • Oster, S.K.1    Ho, C.S.2    Soucie, E.L.3
  • 61
    • 0037795465 scopus 로고    scopus 로고
    • Myocardln is a master regulator of smooth muscle gene expression [J]
    • Wang Z, Wang DZ, Pipes GC, et al. Myocardln is a master regulator of smooth muscle gene expression [J]. Proc Nati Acad Scl USA, 2003,100(12):7129-7134.
    • (2003) Proc Nati Acad Scl USA , vol.100 , Issue.12 , pp. 7129-7134
    • Wang, Z.1    Wang, D.Z.2    Pipes, G.C.3
  • 62
    • 19944421749 scopus 로고    scopus 로고
    • The SRF target gene Fhl2 antagonizes RhoA/MAL-dependent activation of SRF [J]
    • Phlllppar U, Schratt G, Dieterich C, et al. The SRF target gene Fhl2 antagonizes RhoA/MAL-dependent activation of SRF [J]. Mol Cell, 2004,16(6):867-880.
    • (2004) Mol Cell , vol.16 , Issue.6 , pp. 867-880
    • Phlllppar, U.1    Schratt, G.2    Dieterich, C.3
  • 63
    • 12844269689 scopus 로고    scopus 로고
    • Myocardln/MKL family of SRF coactlvators: Key regulators of Immediate early and muscle specific gene expression [J]
    • Cen B, Selvaraj A, Prywes R. Myocardln/MKL family of SRF coactlvators: key regulators of Immediate early and muscle specific gene expression [J]. J Cell Blochem, 2004,93(1):74-82.
    • (2004) J Cell Blochem , vol.93 , Issue.1 , pp. 74-82
    • Cen, B.1    Selvaraj, A.2    Prywes, R.3
  • 64
    • 33749459756 scopus 로고    scopus 로고
    • Gastrointestinal stromal tumors: Review on morphology, molecular pathology, prognosis, and differential diagnosis [J]
    • Mlettlnen M, Lasota J. Gastrointestinal stromal tumors: review on morphology, molecular pathology, prognosis, and differential diagnosis [J]. Arch Pathol Lab Med 2006,130(10):1466-1478.
    • (2006) Arch Pathol Lab Med , vol.130 , Issue.10 , pp. 1466-1478
    • Mlettlnen, M.1    Lasota, J.2


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