메뉴 건너뛰기




Volumn 17, Issue 2, 2007, Pages 136-144

Serum response factor binding sites differ in three human cell types

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE; SERUM RESPONSE FACTOR; TRANSCRIPTION FACTOR ELK 4;

EID: 33846890433     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.5875007     Document Type: Article
Times cited : (67)

References (55)
  • 2
    • 0032476590 scopus 로고    scopus 로고
    • Serum response factor is essential for mesoderm formation during mouse embryogenesis
    • Arsenian, S., Weinhold, B., Oelgeschlager, M., Ruther, U., and Nordheim, A. 1998. Serum response factor is essential for mesoderm formation during mouse embryogenesis. EMBO J. 17: 6289-6299.
    • (1998) EMBO J , vol.17 , pp. 6289-6299
    • Arsenian, S.1    Weinhold, B.2    Oelgeschlager, M.3    Ruther, U.4    Nordheim, A.5
  • 3
    • 33747823564 scopus 로고    scopus 로고
    • MEME: Discovering and analyzing DNA and protein sequence motifs
    • Bailey, T.L., Williams, N., Misleh, C., and Li, W.W. 2006. MEME: Discovering and analyzing DNA and protein sequence motifs. Nucleic Acids Res. 34: W369-W373.
    • (2006) Nucleic Acids Res , vol.34
    • Bailey, T.L.1    Williams, N.2    Misleh, C.3    Li, W.W.4
  • 4
    • 33646554187 scopus 로고    scopus 로고
    • Role of the serum response factor in regulating contractile apparatus gene expression and sarcomeric integrity in cardiomyocytes
    • Balza Jr., R.O. and Misra, R.P. 2006. Role of the serum response factor in regulating contractile apparatus gene expression and sarcomeric integrity in cardiomyocytes. J. Biol. Chem. 281: 6498-6510.
    • (2006) J. Biol. Chem , vol.281 , pp. 6498-6510
    • Balza Jr., R.O.1    Misra, R.P.2
  • 5
    • 0030800965 scopus 로고    scopus 로고
    • Organization and myogenic restricted expression of the murine serum response factor gene. A role for autoregulation
    • Belaguli, N.S., Schildmeyer, L.A., and Schwartz, R.J. 1997. Organization and myogenic restricted expression of the murine serum response factor gene. A role for autoregulation. J. Biol. Chem. 272: 18222-18231.
    • (1997) J. Biol. Chem , vol.272 , pp. 18222-18231
    • Belaguli, N.S.1    Schildmeyer, L.A.2    Schwartz, R.J.3
  • 6
    • 2342514815 scopus 로고    scopus 로고
    • Cyclase-associated protein 1 (CAP1) promotes cofilin-induced actin dynamics in mammalian nonmuscle cells
    • Bertling, E., Hotulainen, P., Mattila, P.K., Matilainen, T., Salminen, M., and Lappalainen, P. 2004. Cyclase-associated protein 1 (CAP1) promotes cofilin-induced actin dynamics in mammalian nonmuscle cells. Mol. Biol. Cell 15: 2324-2334.
    • (2004) Mol. Biol. Cell , vol.15 , pp. 2324-2334
    • Bertling, E.1    Hotulainen, P.2    Mattila, P.K.3    Matilainen, T.4    Salminen, M.5    Lappalainen, P.6
  • 8
    • 0348049997 scopus 로고    scopus 로고
    • Ets ternary complex transcription factors
    • Buchwalter, G., Gross, C., and Wasylyk, B. 2004. Ets ternary complex transcription factors. Gene 324: 1-14.
    • (2004) Gene , vol.324 , pp. 1-14
    • Buchwalter, G.1    Gross, C.2    Wasylyk, B.3
  • 9
    • 12844269689 scopus 로고    scopus 로고
    • Myocardin/MKL family of SRF coactivators: Key regulators of immediate early and muscle specific gene expression
    • Cen, B., Selvaraj, A., and Prywes, R. 2004. Myocardin/MKL family of SRF coactivators: Key regulators of immediate early and muscle specific gene expression. J. Cell. Biochem. 93: 74-82.
    • (2004) J. Cell. Biochem , vol.93 , pp. 74-82
    • Cen, B.1    Selvaraj, A.2    Prywes, R.3
  • 10
    • 0042164600 scopus 로고    scopus 로고
    • Inhibitory cardiac transcription factor, SRF-N, is generated by caspase 3 cleavage in human heart failure and attenuated by ventricular unloading
    • Chang, J., Wei, L., Otani, T., Youker, K.A., Entman, M.L., and Schwartz, R.J. 2003. Inhibitory cardiac transcription factor, SRF-N, is generated by caspase 3 cleavage in human heart failure and attenuated by ventricular unloading. Circulation 108: 407-413.
    • (2003) Circulation , vol.108 , pp. 407-413
    • Chang, J.1    Wei, L.2    Otani, T.3    Youker, K.A.4    Entman, M.L.5    Schwartz, R.J.6
  • 14
    • 33646489610 scopus 로고    scopus 로고
    • A role in learning for SRF: Deletion in the adult forebrain disrupts LTD and the formation of an immediate memory of a novel context
    • Etkin, A., Alarcon, J.M., Weisberg, S.P., Touzani, K., Huang, Y.Y., Nordheim, A., and Kandel, E.R. 2006. A role in learning for SRF: Deletion in the adult forebrain disrupts LTD and the formation of an immediate memory of a novel context. Neuron 50: 127-143.
    • (2006) Neuron , vol.50 , pp. 127-143
    • Etkin, A.1    Alarcon, J.M.2    Weisberg, S.P.3    Touzani, K.4    Huang, Y.Y.5    Nordheim, A.6    Kandel, E.R.7
  • 16
    • 0029010132 scopus 로고
    • Human genome organization
    • Gardiner, K. 1995. Human genome organization. Curr. Opin. Genet. Dev. 5: 315-322.
    • (1995) Curr. Opin. Genet. Dev , vol.5 , pp. 315-322
    • Gardiner, K.1
  • 17
    • 0026185337 scopus 로고
    • p67SRF is a constitutive nuclear protein implicated in the modulation of genes required throughout the G1 period
    • Gauthier-Rouviere, C., Cavadore, J.C., Blanchard, J.M., Lamb, N.J., and Fernandez, A. 1991. p67SRF is a constitutive nuclear protein implicated in the modulation of genes required throughout the G1 period. Cell Regul. 2: 575-588.
    • (1991) Cell Regul , vol.2 , pp. 575-588
    • Gauthier-Rouviere, C.1    Cavadore, J.C.2    Blanchard, J.M.3    Lamb, N.J.4    Fernandez, A.5
  • 20
    • 0024362535 scopus 로고
    • Occupation of the c-fos serum response element in vivo by a multi-protein complex is unaltered by growth factor induction
    • Herrera, R.E., Shaw, P.E., and Nordheim, A. 1989. Occupation of the c-fos serum response element in vivo by a multi-protein complex is unaltered by growth factor induction. Nature 340: 68-70.
    • (1989) Nature , vol.340 , pp. 68-70
    • Herrera, R.E.1    Shaw, P.E.2    Nordheim, A.3
  • 28
    • 0026573577 scopus 로고
    • Structure and mapping of the fosB gene. FosB downregulates the activity of the fosB promoter
    • Lazo, P.S., Dorfman, K., Noguchi, T., Mattei, M.G., and Bravo, R. 1992. Structure and mapping of the fosB gene. FosB downregulates the activity of the fosB promoter. Nucleic Acids Res. 20: 343-350.
    • (1992) Nucleic Acids Res , vol.20 , pp. 343-350
    • Lazo, P.S.1    Dorfman, K.2    Noguchi, T.3    Mattei, M.G.4    Bravo, R.5
  • 29
    • 27944436465 scopus 로고    scopus 로고
    • The neuroplasticity-associated arc gene is a direct transcriptional target of early growth response (Egr) transcription factors
    • Li, L., Carter, J., Gao, X., Whitehead, J., and Tourtellotte, W.G. 2005. The neuroplasticity-associated arc gene is a direct transcriptional target of early growth response (Egr) transcription factors. Mol. Cell. Biol. 25: 10286-10300.
    • (2005) Mol. Cell. Biol , vol.25 , pp. 10286-10300
    • Li, L.1    Carter, J.2    Gao, X.3    Whitehead, J.4    Tourtellotte, W.G.5
  • 30
    • 0035228215 scopus 로고    scopus 로고
    • BioProspector: Discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes
    • Liu, X., Brutlag, D.L., and Liu, J.S. 2001. BioProspector: Discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes. Pac. Symp. Biocomput.6: 127-138.
    • (2001) Pac. Symp. Biocomput , vol.6 , pp. 127-138
    • Liu, X.1    Brutlag, D.L.2    Liu, J.S.3
  • 31
    • 0035827729 scopus 로고    scopus 로고
    • Recruitment of serum response factor and hyperacetylation of histones at smooth muscle-specific regulatory regions during differentiation of a novel P19-derived in vitro smooth muscle differentiation system
    • Manabe, I. and Owens, G.K. 2001. Recruitment of serum response factor and hyperacetylation of histones at smooth muscle-specific regulatory regions during differentiation of a novel P19-derived in vitro smooth muscle differentiation system. Circ. Res. 88: 1127-1134.
    • (2001) Circ. Res , vol.88 , pp. 1127-1134
    • Manabe, I.1    Owens, G.K.2
  • 32
    • 0037870478 scopus 로고    scopus 로고
    • Serum response factor: Toggling between disparate programs of gene expression
    • Miano, J.M. 2003. Serum response factor: Toggling between disparate programs of gene expression. J. Mol. Cell. Cardiol. 35: 577-593.
    • (2003) J. Mol. Cell. Cardiol , vol.35 , pp. 577-593
    • Miano, J.M.1
  • 34
    • 23644456010 scopus 로고    scopus 로고
    • SRF-dependent gene expression in isolated cardiomyocytes: Regulation of genes involved in cardiac hypertrophy
    • Nelson, T.J., Balza Jr., R., Xiao, Q., and Misra, R.P. 2005. SRF-dependent gene expression in isolated cardiomyocytes: Regulation of genes involved in cardiac hypertrophy. J. Mol. Cell. Cardiol. 39: 479-489.
    • (2005) J. Mol. Cell. Cardiol , vol.39 , pp. 479-489
    • Nelson, T.J.1    Balza Jr., R.2    Xiao, Q.3    Misra, R.P.4
  • 35
    • 0347986677 scopus 로고    scopus 로고
    • Identification of a novel basic helix-loop-helix-PAS factor, NXF, reveals a Sim2 competitive, positive regulatory role in dendritic-cytoskeleton modulator drebrin gene expression
    • Ooe, N., Saito, K., Mikami, N., Nakatuka, I., and Kaneko, H. 2004. Identification of a novel basic helix-loop-helix-PAS factor, NXF, reveals a Sim2 competitive, positive regulatory role in dendritic-cytoskeleton modulator drebrin gene expression. Mol. Cell. Biol. 24: 608-616.
    • (2004) Mol. Cell. Biol , vol.24 , pp. 608-616
    • Ooe, N.1    Saito, K.2    Mikami, N.3    Nakatuka, I.4    Kaneko, H.5
  • 39
    • 0025780678 scopus 로고
    • v-Src activates mitogen-responsive transcription factor Egr-1 via serum response elements
    • Qureshi, S.A., Cao, X.M., Sukhatme, V.P., and Foster, D.A. 1991. v-Src activates mitogen-responsive transcription factor Egr-1 via serum response elements. J. Biol. Chem. 266: 10802-10806.
    • (1991) J. Biol. Chem , vol.266 , pp. 10802-10806
    • Qureshi, S.A.1    Cao, X.M.2    Sukhatme, V.P.3    Foster, D.A.4
  • 40
    • 24944435418 scopus 로고    scopus 로고
    • Binding of serum response factor to cystic fibrosis transmembrane conductance regulator CArG-like elements, as a new potential CFTR transcriptional regulation pathway
    • Rene, C., Taulan, M., Iral, F., Doudement, J., L'Honore, A., Gerbon, C., Demaille, J., Claustres, M., and Romey, M.C. 2005. Binding of serum response factor to cystic fibrosis transmembrane conductance regulator CArG-like elements, as a new potential CFTR transcriptional regulation pathway. Nucleic Acids Res. 33: 5271-5290.
    • (2005) Nucleic Acids Res , vol.33 , pp. 5271-5290
    • Rene, C.1    Taulan, M.2    Iral, F.3    Doudement, J.4    L'Honore, A.5    Gerbon, C.6    Demaille, J.7    Claustres, M.8    Romey, M.C.9
  • 42
    • 0024546459 scopus 로고
    • The ability of a ternary complex to form over the serum response element correlates with serum inducibility of the human c-fos promoter
    • Shaw, P.E., Schroter, H., and Nordheim, A. 1989. The ability of a ternary complex to form over the serum response element correlates with serum inducibility of the human c-fos promoter. Cell 56: 563-572.
    • (1989) Cell , vol.56 , pp. 563-572
    • Shaw, P.E.1    Schroter, H.2    Nordheim, A.3
  • 43
    • 0041661957 scopus 로고    scopus 로고
    • Transgenic analysis of the atrialnatriuretic factor (ANF) promoter: Nkx2-5 and GATA-4 binding sites are required for atrial specific expression of ANF
    • Small, E.M. and Krieg, P.A. 2003. Transgenic analysis of the atrialnatriuretic factor (ANF) promoter: Nkx2-5 and GATA-4 binding sites are required for atrial specific expression of ANF. Dev. Biol. 261: 116-131.
    • (2003) Dev. Biol , vol.261 , pp. 116-131
    • Small, E.M.1    Krieg, P.A.2
  • 46
    • 22544436433 scopus 로고    scopus 로고
    • APC/C regulation of axonal growth and synaptic functions in postmitotic neurons: The Liprin-αconnection
    • Teng, F.Y. and Tang, B.L. 2005. APC/C regulation of axonal growth and synaptic functions in postmitotic neurons: The Liprin-αconnection. Cell. Mol. Life Sci. 62: 1571-1578.
    • (2005) Cell. Mol. Life Sci , vol.62 , pp. 1571-1578
    • Teng, F.Y.1    Tang, B.L.2
  • 47
    • 0037154212 scopus 로고    scopus 로고
    • Supervillin associates with androgen receptor and modulates its transcriptional activity
    • Ting, H.J., Yeh, S., Nishimura, K., and Chang, C. 2002. Supervillin associates with androgen receptor and modulates its transcriptional activity. Proc. Natl. Acad. Sci. 99: 661-666.
    • (2002) Proc. Natl. Acad. Sci , vol.99 , pp. 661-666
    • Ting, H.J.1    Yeh, S.2    Nishimura, K.3    Chang, C.4
  • 48
    • 0033920181 scopus 로고    scopus 로고
    • Functional compensation by Egr4 in Egr1-dependent luteinizing hormone regulation and Leydig cell steroidogenesis
    • Tourtellotte, W.G., Nagarajan, R., Bartke, A., and Milbrandt, J. 2000. Functional compensation by Egr4 in Egr1-dependent luteinizing hormone regulation and Leydig cell steroidogenesis. Mol. Cell. Biol. 20: 5261-5268.
    • (2000) Mol. Cell. Biol , vol.20 , pp. 5261-5268
    • Tourtellotte, W.G.1    Nagarajan, R.2    Bartke, A.3    Milbrandt, J.4
  • 49
    • 0022486539 scopus 로고
    • Identification of a protein-binding site that mediates transcriptional response of the c-fos gene to serum factors
    • Treisman, R. 1986. Identification of a protein-binding site that mediates transcriptional response of the c-fos gene to serum factors. Cell 46: 567-574.
    • (1986) Cell , vol.46 , pp. 567-574
    • Treisman, R.1
  • 50
    • 0026469669 scopus 로고
    • Spatial flexibility in ternary complexes between SRF and its accessory proteins
    • Treisman, R., Marais, R., and Wynne, J. 1992. Spatial flexibility in ternary complexes between SRF and its accessory proteins. EMBO J. 11: 4631-4640.
    • (1992) EMBO J , vol.11 , pp. 4631-4640
    • Treisman, R.1    Marais, R.2    Wynne, J.3
  • 51
    • 1542338426 scopus 로고    scopus 로고
    • Transcriptional regulation and binding of heat shock factor 1 and heat shock factor 2 to 32 human heat shock genes during thermal stress and differentiation
    • Trinklein, N.D., Chen, W.C., Kingston, R.E., and Myers, R.M. 2004. Transcriptional regulation and binding of heat shock factor 1 and heat shock factor 2 to 32 human heat shock genes during thermal stress and differentiation. Cell Stress Chaperones 9: 21-28.
    • (2004) Cell Stress Chaperones , vol.9 , pp. 21-28
    • Trinklein, N.D.1    Chen, W.C.2    Kingston, R.E.3    Myers, R.M.4
  • 52
    • 0036229862 scopus 로고    scopus 로고
    • When Ets transcription factors meet their partners
    • Verger, A. and Duterque-Coquillaud, M. 2002. When Ets transcription factors meet their partners. Bioessays 24: 362-370.
    • (2002) Bioessays , vol.24 , pp. 362-370
    • Verger, A.1    Duterque-Coquillaud, M.2
  • 55
    • 4344607122 scopus 로고    scopus 로고
    • CisModule: De novo discovery of cis-regulatory modules by hierarchical mixture modeling
    • Zhou, Q. and Wong, W.H. 2004. CisModule: De novo discovery of cis-regulatory modules by hierarchical mixture modeling. Proc. Natl. Acad. Sci. 101: 12114-12119.
    • (2004) Proc. Natl. Acad. Sci , vol.101 , pp. 12114-12119
    • Zhou, Q.1    Wong, W.H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.