-
1
-
-
21044431735
-
Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution
-
Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, Patel S, et al. Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. Science 2005; 308:1149-54.
-
(2005)
Science
, vol.308
, pp. 1149-1154
-
-
Cheng, J.1
Kapranov, P.2
Drenkow, J.3
Dike, S.4
Brubaker, S.5
Patel, S.6
-
2
-
-
22244442468
-
Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays
-
Kapranov P, Drenkow J, Cheng J, Long J, Helt G, Dike S, et al. Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays. Genome Res 2005; 15:987-97.
-
(2005)
Genome Res
, vol.15
, pp. 987-997
-
-
Kapranov, P.1
Drenkow, J.2
Cheng, J.3
Long, J.4
Helt, G.5
Dike, S.6
-
3
-
-
0037012881
-
Large-scale transcriptional activity in chromosomes 21 and 22
-
Kapranov P, Cawley SE, Drenkow J, Bekiranov S, Strausberg RL, Fodor SPA, et al. Large-scale transcriptional activity in chromosomes 21 and 22. Science 2002; 296:916-9.
-
(2002)
Science
, vol.296
, pp. 916-919
-
-
Kapranov, P.1
Cawley, S.E.2
Drenkow, J.3
Bekiranov, S.4
Strausberg, R.L.5
Fodor, S.P.A.6
-
5
-
-
77951583810
-
Epigenetic Regulation of TLR4 Gene Expression in Intestinal Epithelial Cells for the Maintenance of Intestinal Homeostasis
-
Takahashi K, Sugi Y, Hosono A, Kaminogawa S. Epigenetic Regulation of TLR4 Gene Expression in Intestinal Epithelial Cells for the Maintenance of Intestinal Homeostasis. J Immunol 2009; 183:6522-9.
-
(2009)
J Immunol
, vol.183
, pp. 6522-6529
-
-
Takahashi, K.1
Sugi, Y.2
Hosono, A.3
Kaminogawa, S.4
-
6
-
-
73549085850
-
DNA Methylation: An Introduction to the Biology and the Disease-Associated Changes of a Promising Biomarker
-
Tost J. DNA Methylation: An Introduction to the Biology and the Disease-Associated Changes of a Promising Biomarker. Mol Biotechnol 2010; 44:71-81.
-
(2010)
Mol Biotechnol
, vol.44
, pp. 71-81
-
-
Tost, J.1
-
7
-
-
70450225479
-
CHD5 is downregulated through promoter hypermethylation in gastric cancer
-
Wang X, Lau KKK, So LKY, Lam YW. CHD5 is downregulated through promoter hypermethylation in gastric cancer. J Biomed Sci 2009; 16:95.
-
(2009)
J Biomed Sci
, vol.16
, pp. 95
-
-
Wang, X.1
Lau, K.K.K.2
So, L.K.Y.3
Lam, Y.W.4
-
8
-
-
77957970301
-
Epigenetic modifications and human disease
-
Portela A, Esteller M. Epigenetic modifications and human disease. Nat Biotechnol 2010; 28:1057-68.
-
(2010)
Nat Biotechnol
, vol.28
, pp. 1057-1068
-
-
Portela, A.1
Esteller, M.2
-
9
-
-
73649107635
-
Epigenetics: Molecular mechanisms and implications for disease
-
Handel AE, Ebers GC, Ramagopalan SV. Epigenetics: molecular mechanisms and implications for disease. Trends Mol Med 2010; 16:7-16.
-
(2010)
Trends Mol Med
, vol.16
, pp. 7-16
-
-
Handel, A.E.1
Ebers, G.C.2
Ramagopalan, S.V.3
-
10
-
-
43649100584
-
Epigenetics and cancer, 2nd IARC meeting, Lyon, France, 6 and 7 December 2007
-
Lambert MP, Herceg Z. Epigenetics and cancer, 2nd IARC meeting, Lyon, France, 6 and 7 December 2007. Mol Oncol 2008; 2:33-40.
-
(2008)
Mol Oncol
, vol.2
, pp. 33-40
-
-
Lambert, M.P.1
Herceg, Z.2
-
11
-
-
31444437920
-
Epigenetics provides a new generation of oncogenes and tumor-suppressor genes
-
Esteller M. Epigenetics provides a new generation of oncogenes and tumor-suppressor genes. Brit J Cancer 2006; 94:179-83.
-
(2006)
Brit J Cancer
, vol.94
, pp. 179-183
-
-
Esteller, M.1
-
13
-
-
33745268919
-
Sonic Hedgehog, a key development gene, experienced intensified molecular evolution in primates
-
Dorus S, Anderson JR, Vallender EJ, Gilbert SL, Zhang L, Chemnick LG, et al. Sonic Hedgehog, a key development gene, experienced intensified molecular evolution in primates. Hum Mol Genet 2006; 15:2031-7.
-
(2006)
Hum Mol Genet
, vol.15
, pp. 2031-2037
-
-
Dorus, S.1
Anderson, J.R.2
Vallender, E.J.3
Gilbert, S.L.4
Zhang, L.5
Chemnick, L.G.6
-
14
-
-
0035577854
-
Hedgehog signaling in animal development: Paradigms and principles
-
Ingham PW, McMahon AP. Hedgehog signaling in animal development: paradigms and principles. Gene Dev 2001; 15:3059-87.
-
(2001)
Gene Dev
, vol.15
, pp. 3059-3087
-
-
Ingham, P.W.1
McMahon, A.P.2
-
15
-
-
0030332133
-
Sonic hedgehog regulates patterning in early embryos
-
Marigo V, Laufer E, Nelson CE, Riddle RD, Johnson RL, Tabin C. Sonic hedgehog regulates patterning in early embryos. Biochem Soc Symp 1996; 51-60.
-
(1996)
Biochem Soc Symp
, pp. 51-60
-
-
Marigo, V.1
Laufer, E.2
Nelson, C.E.3
Riddle, R.D.4
Johnson, R.L.5
Tabin, C.6
-
16
-
-
70349974840
-
Sonic hedgehog paracrine signaling regulates metastasis and lymphangiogenesis in pancreatic cancer
-
Bailey JM, Mohr AM, Hollingsworth MA. Sonic hedgehog paracrine signaling regulates metastasis and lymphangiogenesis in pancreatic cancer. Oncogene 2009; 28:3513-25.
-
(2009)
Oncogene
, vol.28
, pp. 3513-3525
-
-
Bailey, J.M.1
Mohr, A.M.2
Hollingsworth, M.A.3
-
17
-
-
77956051646
-
Expression and regulation mechanisms of Sonic Hedgehog in breast cancer
-
Cui W, Wang LH, Wen YY, Song M, Li BL, Chen XL, et al. Expression and regulation mechanisms of Sonic Hedgehog in breast cancer. Cancer Sci 2010; 101:927-33.
-
(2010)
Cancer Sci
, vol.101
, pp. 927-933
-
-
Cui, W.1
Wang, L.H.2
Wen, Y.Y.3
Song, M.4
Li, B.L.5
Chen, X.L.6
-
18
-
-
70350534843
-
Hedgehog Target Genes: Mechanisms of Carcinogenesis Induced by Aberrant Hedgehog Signaling Activation
-
Katoh Y, Katoh M. Hedgehog Target Genes: Mechanisms of Carcinogenesis Induced by Aberrant Hedgehog Signaling Activation. Curr Mol Med 2009; 9:873-86.
-
(2009)
Curr Mol Med
, vol.9
, pp. 873-886
-
-
Katoh, Y.1
Katoh, M.2
-
19
-
-
70349599606
-
A critical role of Sonic Hedgehog signaling in maintaining the tumorigenicity of neuroblastoma cells
-
Mao L, Xia YP, Zhou YN, Dai RL, Yang X, Duan SJ, et al. A critical role of Sonic Hedgehog signaling in maintaining the tumorigenicity of neuroblastoma cells. Cancer Sci 2009; 100:1848-55.
-
(2009)
Cancer Sci
, vol.100
, pp. 1848-1855
-
-
Mao, L.1
Xia, Y.P.2
Zhou, Y.N.3
Dai, R.L.4
Yang, X.5
Duan, S.J.6
-
20
-
-
33646137574
-
Increased expression of sonic hedgehog and altered methylation of its promoter region in gastric cancer and its related lesions
-
Wang LH, Choi YL, Hua XY, Shin YK, Song YJ, Youn SJ, et al. Increased expression of sonic hedgehog and altered methylation of its promoter region in gastric cancer and its related lesions. Mod Pathol 2006; 19:675-83.
-
(2006)
Mod Pathol
, vol.19
, pp. 675-683
-
-
Wang, L.H.1
Choi, Y.L.2
Hua, X.Y.3
Shin, Y.K.4
Song, Y.J.5
Youn, S.J.6
-
21
-
-
73449090411
-
Sonic hedgehog relates to colorectal carcinogenesis
-
Yoshikawa K, Shimada M, Miyamoto H, Higashijima J, Miyatani T, Nishioka M, et al. Sonic hedgehog relates to colorectal carcinogenesis. J Gastroenterol 2009; 44:1113-7.
-
(2009)
J Gastroenterol
, vol.44
, pp. 1113-1117
-
-
Yoshikawa, K.1
Shimada, M.2
Miyamoto, H.3
Higashijima, J.4
Miyatani, T.5
Nishioka, M.6
-
22
-
-
0242270878
-
Hedgehog is an early and late mediator of pancreatic cancer tumorigenesis
-
Thayer SP, di Magliano MP, Heiser PW, Nielsen CM, Roberts DJ, Lauwers GY, et al. Hedgehog is an early and late mediator of pancreatic cancer tumorigenesis. Nature 2003; 425:851-6.
-
(2003)
Nature
, vol.425
, pp. 851-856
-
-
Thayer, S.P.1
di Magliano, M.P.2
Heiser, P.W.3
Nielsen, C.M.4
Roberts, D.J.5
Lauwers, G.Y.6
-
23
-
-
71549129295
-
Activation of hedgehog signaling is not a frequent event in ovarian cancers
-
Yang L, He J, Huang SH, Zhang XL, Bian YH, He NG, et al. Activation of hedgehog signaling is not a frequent event in ovarian cancers. Mol Cancer 2009; 8:112.
-
(2009)
Mol Cancer
, vol.8
, pp. 112
-
-
Yang, L.1
He, J.2
Huang, S.H.3
Zhang, X.L.4
Bian, Y.H.5
He, N.G.6
-
24
-
-
77949657774
-
Distinct expression patterns of hedgehog ligands between cultured and primary colorectal cancers are associated with aberrant methylation of their promoters
-
Fu X, Deng H, Zhao L, Li J, Zhou Y, Zhang Y. Distinct expression patterns of hedgehog ligands between cultured and primary colorectal cancers are associated with aberrant methylation of their promoters. Mol Cell Biochem 2009; 337:185-92.
-
(2009)
Mol Cell Biochem
, vol.337
, pp. 185-192
-
-
Fu, X.1
Deng, H.2
Zhao, L.3
Li, J.4
Zhou, Y.5
Zhang, Y.6
-
26
-
-
0037133565
-
Comprehensive analysis of CpG islands in human chromosomes 21 and 22
-
Takai D, Jones PA. Comprehensive analysis of CpG islands in human chromosomes 21 and 22. Proc Natl Acad Sci USA 2002; 99:3740-5.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 3740-3745
-
-
Takai, D.1
Jones, P.A.2
-
27
-
-
0036856355
-
MethPrimer: Designing primers for methylation PCRs
-
Li LC, Dahiya R. MethPrimer: designing primers for methylation PCRs. Bioinformatics 2002; 18:1427-31.
-
(2002)
Bioinformatics
, vol.18
, pp. 1427-1431
-
-
Li, L.C.1
Dahiya, R.2
-
28
-
-
23044514626
-
Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells
-
Weber M, Davies JJ, Wittig D, Oakeley EJ, Haase M, Lam WL, et al. Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells. Nat Genet 2005; 37:853-62.
-
(2005)
Nat Genet
, vol.37
, pp. 853-862
-
-
Weber, M.1
Davies, J.J.2
Wittig, D.3
Oakeley, E.J.4
Haase, M.5
Lam, W.L.6
-
29
-
-
66049096156
-
Histone Deacetylase 7, a Potential Target for the Antifibrotic Treatment of Systemic Sclerosis
-
Hemmatazad H, Rodrigues HM, Maurer B, Brentano F, Pileckyte M, Distler JHW, et al. Histone Deacetylase 7, a Potential Target for the Antifibrotic Treatment of Systemic Sclerosis. Arthitis Rheum-US 2009; 60:1519-29.
-
(2009)
Arthitis Rheum-US
, vol.60
, pp. 1519-1529
-
-
Hemmatazad, H.1
Rodrigues, H.M.2
Maurer, B.3
Brentano, F.4
Pileckyte, M.5
Distler, J.H.W.6
-
30
-
-
77957366305
-
DNA methylation and cancer
-
Kulis M, Esteller M. DNA methylation and cancer. Adv Genet 2010; 70:27-56.
-
(2010)
Adv Genet
, vol.70
, pp. 27-56
-
-
Kulis, M.1
Esteller, M.2
-
31
-
-
72449149112
-
The Sonic Hedgehog pathway stimulates prostate tumor growth by paracrine signaling and recapitulates embryonic gene expression in tumor myofibroblasts
-
Shaw A, Gipp J, Bushman W. The Sonic Hedgehog pathway stimulates prostate tumor growth by paracrine signaling and recapitulates embryonic gene expression in tumor myofibroblasts. Oncogene 2009; 28:4480-90.
-
(2009)
Oncogene
, vol.28
, pp. 4480-4490
-
-
Shaw, A.1
Gipp, J.2
Bushman, W.3
-
32
-
-
76249131823
-
DNA methylation of developmental genes in pediatric medulloblastomas identified by denaturation analysis of methylation differences
-
Diede SJ, Guenthoer J, Geng LN, Mahoney SE, Marotta M, Olson JM, et al. DNA methylation of developmental genes in pediatric medulloblastomas identified by denaturation analysis of methylation differences. Proc Natl Acad Sci USA 2010; 107:234-9.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 234-239
-
-
Diede, S.J.1
Guenthoer, J.2
Geng, L.N.3
Mahoney, S.E.4
Marotta, M.5
Olson, J.M.6
-
33
-
-
74949136833
-
Downregulation of SHH/BMP4 signaling in Human Anorectal Malformations
-
Zhang J, Zhang ZB, Gao H, Zhang D, Wang WL. Downregulation of SHH/BMP4 signaling in Human Anorectal Malformations. J Int Med Res 2009; 37:1842-50.
-
(2009)
J Int Med Res
, vol.37
, pp. 1842-1850
-
-
Zhang, J.1
Zhang, Z.B.2
Gao, H.3
Zhang, D.4
Wang, W.L.5
-
34
-
-
77954609358
-
Human mammary cancer progression model recapitulates methylation events associated with breast premalignancy
-
Dumont N, Crawford YG, Sigaroudinia M, Nagrani SS, Wilson MB, Buehring GC, et al. Human mammary cancer progression model recapitulates methylation events associated with breast premalignancy. Breast Cancer Res 2009; 11:87.
-
(2009)
Breast Cancer Res
, vol.11
, pp. 87
-
-
Dumont, N.1
Crawford, Y.G.2
Sigaroudinia, M.3
Nagrani, S.S.4
Wilson, M.B.5
Buehring, G.C.6
-
35
-
-
18444375277
-
DNA methylation and histone deacetylation associated with silencing DAP kinase gene expression in colorectal and gastric cancers
-
Satoh A, Toyota M, Itoh F, Kikuchi T, Obata T, Sasaki Y, et al. DNA methylation and histone deacetylation associated with silencing DAP kinase gene expression in colorectal and gastric cancers. Br J Cancer 2002; 86:1817-23.
-
(2002)
Br J Cancer
, vol.86
, pp. 1817-1823
-
-
Satoh, A.1
Toyota, M.2
Itoh, F.3
Kikuchi, T.4
Obata, T.5
Sasaki, Y.6
-
36
-
-
0032890965
-
The DNA methylation paradox
-
Jones PA. The DNA methylation paradox. Trends Genet 1999; 15:34-7.
-
(1999)
Trends Genet
, vol.15
, pp. 34-37
-
-
Jones, P.A.1
-
37
-
-
78049480474
-
Exon 2 methylation inhibits hepaCAM expression in transitional cell carcinoma of the bladder
-
Pan C, Wu X, Luo C, Yang S, Pu J, Wang C, et al. Exon 2 methylation inhibits hepaCAM expression in transitional cell carcinoma of the bladder. Urol Int 2010; 85:347-54.
-
(2010)
Urol Int
, vol.85
, pp. 347-354
-
-
Pan, C.1
Wu, X.2
Luo, C.3
Yang, S.4
Pu, J.5
Wang, C.6
-
38
-
-
34249063835
-
Dynamic usage of transcription start sites within core promoters
-
Kawaji H, Frith MC, Katayama S, Sandelin A, Kai C, Kawai J, et al. Dynamic usage of transcription start sites within core promoters. Genome Biol 2006; 7:118.
-
(2006)
Genome Biol
, vol.7
, pp. 118
-
-
Kawaji, H.1
Frith, M.C.2
Katayama, S.3
Sandelin, A.4
Kai, C.5
Kawai, J.6
-
39
-
-
33745026527
-
Aberrant methylation of the Wnt antagonist SFRP1 in breast cancer is associated with unfavourable prognosis
-
Veeck J, Niederacher D, An H, Klopocki E, Wiesmann F, Betz B, et al. Aberrant methylation of the Wnt antagonist SFRP1 in breast cancer is associated with unfavourable prognosis. Oncogene 2006; 25:3479-88.
-
(2006)
Oncogene
, vol.25
, pp. 3479-3488
-
-
Veeck, J.1
Niederacher, D.2
An, H.3
Klopocki, E.4
Wiesmann, F.5
Betz, B.6
-
40
-
-
0031730893
-
Real-time quantitative RT-PCR after laser-assisted cell picking
-
Fink L, Seeger W, Ermert L, Hanze J, Stahl U, Grimminger F, et al. Real-time quantitative RT-PCR after laser-assisted cell picking. Nat Med 1998; 4:1329-33.
-
(1998)
Nat Med
, vol.4
, pp. 1329-1333
-
-
Fink, L.1
Seeger, W.2
Ermert, L.3
Hanze, J.4
Stahl, U.5
Grimminger, F.6
|