Epigenetics and cancer, 2nd IARC meeting, Lyon, France, 6 and 7 December 2007

Molecular Oncology

Volumn 2, Issue 1, 2008, Pages 33-40

  Lambert, Marie Pierre ^a   Herceg, Zdenko ^a  

^a INTERNATIONAL AGENCY FOR RESEARCH ON CANCER   (France)

Author keywords

Cancer; DNA methylation; Environment; Epigenetic changes; Epigenomics; Histone modifications; Molecular epidemiology

Indexed keywords

HISTONE;

CANCER CELL; CANCER PREVENTION; CANCER RESEARCH; CARCINOGENESIS; CELL CYCLE; CELL DEATH; DISORDERS OF DNA SYNTHESIS AND REPAIR; DNA METHYLATION; EARLY DIAGNOSIS; ENVIRONMENTAL FACTOR; EPIGENETICS; FUNDING; GENE ACTIVATION; GENE SILENCING; GENOMICS; HERITABILITY; HUMAN; MOLECULAR EPIDEMIOLOGY; NEOPLASM; ONCOGENE; PRIORITY JOURNAL; PROTEIN MODIFICATION; REVIEW; RISK ASSESSMENT; TUMOR SUPPRESSOR GENE;

EID: 43649100584     PISSN: 15747891     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molonc.2008.03.005     Document Type: Review

References (34)

1. Y. Akiyama N. Watkins H. Suzuki K.W. Jair M. van Engeland M. Esteller H. Sakai C.Y. Ren Y. Yuasa J.G. Herman GATA-4 and GATA-5 transcription factor genes and potential downstream antitumor target genes are epigenetically silenced in colorectal and gastric cancer Molecular and Cellular Biology 23 2003 8429 8439
2. S.B. Baylin DNA methylation and gene silencing in cancer Nature Clinical Practice Oncology 2 Suppl. 1 2005 S4 S11
3. A. Bird DNA methylation patterns and epigenetic memory Genes and Development 16 2002 6 21
4. G.A. Calin C.M. Croce MicroRNA signatures in human cancers Nature Reviews 6 2006 857 866
5. P.A. Callinan A.P. Feinberg The emerging science of epigenomics Human Molecular Genetics 15 Spec No. 1 2006 R95 R101
6. M.J. Carrozza R.T. Utley J.L. Workman J. Cote The diverse functions of histone acetyltransferase complexes Trends in Genetics 19 2003 321 329
7. K. Delaval R. Feil Epigenetic regulation of mammalian genomic imprinting Current Opinion in Genetics and Development 14 2004 188 195
8. K. Delaval J. Govin F. Cerqueira S. Rousseaux S. Khochbin R. Feil Differential histone modifications mark mouse imprinting control regions during spermatogenesis The Embo Journal 26 2007 720 729
9. F. Eckhardt J. Lewin R. Cortese V.K. Rakyan J. Attwood M. Burger J. Burton T.V. Cox R. Davies T.A. Down DNA methylation profiling of human chromosomes 6, 20 and 22 Nature Genetics 38 2006 1378 1385
10. M. Esteller Cancer epigenomics: DNA methylomes and histone-modification maps Nature Reviews Genetics 8 2007 286 298
11. A.P. Feinberg R. Ohlsson S. Henikoff The epigenetic progenitor origin of human cancer Nature Reviews Genetics 7 2006 21 33
12. A.P. Feinberg B. Tycko The history of cancer epigenetics Nature Reviews 4 2004 143 153
13. C. Fournier Y. Goto E. Ballestar K. Delaval A.M. Hever M. Esteller R. Feil Allele-specific histone lysine methylation marks regulatory regions at imprinted mouse genes The Embo Journal 21 2002 6560 6570
14. M.P. Hitchins J.J. Wong G. Suthers C.M. Suter D.I. Martin N.J. Hawkins R.L. Ward Inheritance of a cancer-associated MLH1 germ-line epimutation The New England Journal of Medicine 356 2007 697 705
15. R. Jaenisch A. Bird Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals Nature Genetics 33 Suppl. 2003 245 254
16. T. Jenuwein C.D. Allis Translating the histone code Science 293 2001 1074 1080 (New York, NY)
17. R. Murr T. Vaissiere C. Sawan V. Shukla Z. Herceg Orchestration of chromatin-based processes: mind the TRRAP Oncogene 26 2007 5358 5372
18. A. Murrell V.K. Rakyan S. Beck From genome to epigenome Human Molecular Genetics 14 Spec No. 1 2005 R3 R10
19. M. Pannetier R. Feil Epigenetic stability of embryonic stem cells and developmental potential Trends in Biotechnology 25 2007 556 562
20. T. Rauch H. Li X. Wu G.P. Pfeifer MIRA-assisted microarray analysis, a new technology for the determination of DNA methylation patterns, identifies frequent methylation of homeodomain-containing genes in lung cancer cells Cancer Research 66 2006 7939 7947
21. A. Raval S.M. Tanner J.C. Byrd E.B. Angerman J.D. Perko S.S. Chen B. Hackanson M.R. Grever D.M. Lucas J.J. Matkovic Downregulation of death-associated protein kinase 1 (DAPK1) in chronic lymphocytic leukemia Cell 129 2007 879 890
22. C.W. Roberts S.H. Orkin The SWI/SNF complex – chromatin and cancer Nature Reviews 4 2004 133 142
23. M.R. Rountree K.E. Bachman J.G. Herman S.B. Baylin DNA methylation, chromatin inheritance, and cancer Oncogene 20 2001 3156 3165
24. Y. Schlesinger R. Straussman I. Keshet S. Farkash M. Hecht J. Zimmerman E. Eden Z. Yakhini E. Ben-Shushan B.E. Reubinoff Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer Nature Genetics 39 2007 232 236
25. L. Shen M. Toyota Y. Kondo E. Lin L. Zhang Y. Guo N.S. Hernandez X. Chen S. Ahmed K. Konishi Integrated genetic and epigenetic analysis identifies three different subclasses of colon cancer Proceedings of the National Academy of Sciences of the United States of America 104 2007 18654 18659
26. B.D. Strahl C.D. Allis The language of covalent histone modifications Nature 403 2000 41 45
27. M. Toyota N. Ahuja M. Ohe-Toyota J.G. Herman S.B. Baylin J.P. Issa CpG island methylator phenotype in colorectal cancer Proceedings of the National Academy of Sciences of the United States of America 96 1999 8681 8686
28. D. Umlauf Y. Goto R. Cao F. Cerqueira A. Wagschal Y. Zhang R. Feil Imprinting along the Kcnq1 domain on mouse chromosome 7 involves repressive histone methylation and recruitment of Polycomb group complexes Nature Genetics 36 2004 1296 1300
29. P.J. Valk R.G. Verhaak M.A. Beijen C.A. Erpelinck S. Barjesteh van Waalwijk van Doorn-Khosrovani J.M. Boer H.B. Beverloo M.J. Moorhouse P.J. van der Spek B. Lowenberg Prognostically useful gene-expression profiles in acute myeloid leukemia The New England Journal of Medicine 350 2004 1617 1628
30. S. Volinia G.A. Calin C.G. Liu S. Ambs A. Cimmino F. Petrocca R. Visone M. Iorio C. Roldo M. Ferracin A microRNA expression signature of human solid tumors defines cancer gene targets Proceedings of the National Academy of Sciences of the United States of America 103 2006 2257 2261
31. A. Wagschal H.G. Sutherland K. Woodfine A. Henckel K. Chebli R. Schulz R.J. Oakey W.A. Bickmore R. Feil G9a histone methyltransferase contributes to imprinting in the mouse placenta Molecular and Cellular Biology 28 2008 1104 1113
32. M. Weber I. Hellmann M.B. Stadler L. Ramos S. Paabo M. Rebhan D. Schubeler Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome Nature Genetics 39 2007 457 466
33. M. Widschwendter U. Menon Circulating methylated DNA: a new generation of tumor markers Clinical Cancer Research 12 2006 7205 7208
34. E. Yuan F. Haghighi S. White R. Costa J. McMinn K. Chun M. Minden B. Tycko A single nucleotide polymorphism chip-based method for combined genetic and epigenetic profiling: validation in decitabine therapy and tumor/normal comparisons Cancer Research 66 2006 3443 3451