-
1
-
-
41549132691
-
Quantitative Analysis of Pathways Controlling Extrinsic Apoptosis in Single Cells
-
DOI 10.1016/j.molcel.2008.02.012, PII S1097276508001317
-
JG Albeck JM Burke BB Aldridge M Zhang DA Lauffenburger, et al. 2008 Quantitative analysis of pathways controlling extrinsic apoptosis in single cells Mol. Cell. 30 11 25 1:CAS:528:DC%2BD1cXkvFeguro%3D 10.1016/j.molcel.2008. 02.012 18406323 (Pubitemid 351470145)
-
(2008)
Molecular Cell
, vol.30
, Issue.1
, pp. 11-25
-
-
Albeck, J.G.1
Burke, J.M.2
Aldridge, B.B.3
Zhang, M.4
Lauffenburger, D.A.5
Sorger, P.K.6
-
2
-
-
33750533388
-
Physicochemical modelling of cell signalling pathways
-
DOI 10.1038/ncb1497, PII NCB1497
-
BB Aldridge JM Burke DA Lauffenburger PK Sorger 2006 Physicochemical modelling of cell signalling pathways Nat. Cell. Biol. 8 1195 1203 1:CAS:528:DC%2BD28XhtFCqu7nI 10.1038/ncb1497 17060902 (Pubitemid 44660581)
-
(2006)
Nature Cell Biology
, vol.8
, Issue.11
, pp. 1195-1203
-
-
Aldridge, B.B.1
Burke, J.M.2
Lauffenburger, D.A.3
Sorger, P.K.4
-
3
-
-
0033555859
-
Emergent properties of networks of biological signaling pathways
-
DOI 10.1126/science.283.5400.381
-
US Bhalla R Iyengar 1999 Emergent properties of networks of biological signaling pathways Science 283 381 387 1:CAS:528:DyaK1MXns1ektA%3D%3D 10.1126/science.283.5400.381 9888852 (Pubitemid 29045289)
-
(1999)
Science
, vol.283
, Issue.5400
, pp. 381-387
-
-
Bhalla, U.S.1
Iyengar, R.2
-
4
-
-
54249137797
-
Feedback loops shape cellular signals in space and time
-
1:CAS:528:DC%2BD1cXht1CitrvI 10.1126/science.1160617 18927383
-
O Brandman T Meyer 2008 Feedback loops shape cellular signals in space and time Science 322 390 395 1:CAS:528:DC%2BD1cXht1CitrvI 10.1126/science. 1160617 18927383
-
(2008)
Science
, vol.322
, pp. 390-395
-
-
Brandman, O.1
Meyer, T.2
-
5
-
-
36549069357
-
Modeling hypertrophic IP3 transients in the cardiac myocyte
-
DOI 10.1529/biophysj.107.110031
-
M Cooling P Hunter EJ Crampin 2007 Modeling hypertrophic IP3 transients in the cardiac myocyte Biophys. J. 93 3421 3433 1:CAS:528:DC%2BD2sXht12jsrfM 10.1529/biophysj.107.110031 17693463 (Pubitemid 350190806)
-
(2007)
Biophysical Journal
, vol.93
, Issue.10
, pp. 3421-3433
-
-
Cooling, M.1
Hunter, P.2
Crampin, E.J.3
-
6
-
-
35748977901
-
Universally sloppy parameter sensitivities in systems biology models
-
DOI 10.1371/journal.pcbi.0030189
-
RN Gutenkunst JJ Waterfall FP Casey KS Brown CR Myers, et al. 2007 Universally sloppy parameter sensitivities in systems biology models PLoS Comput. Biol. 3 1871 1878 1:CAS:528:DC%2BD2sXhsVCnu7bI 10.1371/journal.pcbi. 0030189 17922568 (Pubitemid 350043403)
-
(2007)
PLoS Computational Biology
, vol.3
, Issue.10
, pp. 1871-1878
-
-
Gutenkunst, R.N.1
Waterfall, J.J.2
Casey, F.P.3
Brown, K.S.4
Myers, C.R.5
Sethna, J.P.6
-
7
-
-
0037044575
-
The IκB-NF-κB signaling module: Temporal control and selective gene activation
-
DOI 10.1126/science.1071914
-
A Hoffmann A Levchenko ML Scott D Baltimore 2002 The IkappaB-NF-kappaB signaling module: temporal control and selective gene activation Science 298 1241 1245 1:CAS:528:DC%2BD38XosVerurc%3D 10.1126/science.1071914 12424381 (Pubitemid 35285493)
-
(2002)
Science
, vol.298
, Issue.5596
, pp. 1241-1245
-
-
Hoffmann, A.1
Levchenko, A.2
Scott, M.L.3
Baltimore, D.4
-
8
-
-
58149479354
-
GSK3 inhibitors show benefits in an Alzheimer's disease (AD) model of neurodegeneration but adverse effects in control animals
-
1:CAS:528:DC%2BD1MXnslSltg%3D%3D 10.1016/j.nbd.2008.10.007 19038340
-
S Hu AN Begum MR Jones MS Oh WK Beech, et al. 2009 GSK3 inhibitors show benefits in an Alzheimer's disease (AD) model of neurodegeneration but adverse effects in control animals Neurobiol. Dis. 33 193 206 1:CAS:528: DC%2BD1MXnslSltg%3D%3D 10.1016/j.nbd.2008.10.007 19038340
-
(2009)
Neurobiol. Dis.
, vol.33
, pp. 193-206
-
-
Hu, S.1
Begum, A.N.2
Jones, M.R.3
Oh, M.S.4
Beech, W.K.5
-
9
-
-
12444295462
-
Cross-talk between peroxisome proliferator-activated receptor (PPAR) α and liver X receptor (LXR) in nutritional regulation of fatty acid metabolism. II. LXRs suppress lipid degradation gene promoters through inhibition of PPAR signaling
-
DOI 10.1210/me.2002-0191
-
T Ide H Shimano T Yoshikawa N Yahagi M Amemiya-Kudo, et al. 2003 Cross-talk between peroxisome proliferator-activated receptor (PPAR) alpha and liver X receptor (LXR) in nutritional regulation of fatty acid metabolism. II. LXRs suppress lipid degradation gene promoters through inhibition of PPAR signaling Mol. Endocrinol. 17 1255 1267 1:CAS:528:DC%2BD3sXlt1Krurs%3D 10.1210/me.2002-0191 12730332 (Pubitemid 36819949)
-
(2003)
Molecular Endocrinology
, vol.17
, Issue.7
, pp. 1255-1267
-
-
Ide, T.1
Shimano, H.2
Yoshikawa, T.3
Yahagi, N.4
Amemiya-Kudo, M.5
Matsuzaka, T.6
Nakakuki, M.7
Yatoh, S.8
Iizuka, Y.9
Tomita, S.10
Ohashi, K.11
Takahashi, A.12
Sone, H.13
Gotoda, T.14
Osuga, J.-I.15
Ishibashi, S.16
Yamada, N.17
-
10
-
-
66149156514
-
Why we need quantitative dynamic models
-
10.1126/scisignal.264eg3 19336836
-
R Iyengar 2009 Why we need quantitative dynamic models Sci. Signal 2 eg3 10.1126/scisignal.264eg3 19336836
-
(2009)
Sci. Signal
, vol.2
, pp. 3
-
-
Iyengar, R.1
-
11
-
-
0029805887
-
An oxysterol signalling pathway mediated by the nuclear receptor LXRα
-
DOI 10.1038/383728a0
-
BA Janowski PJ Willy TR Devi JR Falck DJ Mangelsdorf 1996 An oxysterol signalling pathway mediated by the nuclear receptor LXR alpha Nature 383 728 731 1:CAS:528:DyaK28XmsVGns78%3D 10.1038/383728a0 8878485 (Pubitemid 26360651)
-
(1996)
Nature
, vol.383
, Issue.6602
, pp. 728-731
-
-
Janowski, B.A.1
Willy, P.J.2
Devi, T.R.3
Falck, J.R.4
Mangelsdorf, D.J.5
-
12
-
-
11144326376
-
A new approach to an AIDS vaccine: Creating antibodies to HIV vif will enable apobec3G to turn HIV-infection into a benign problem
-
DOI 10.1016/j.mehy.2004.07.015, PII S0306987704004426
-
W Jeffrey Fessel 2005 A new approach to an AIDS vaccine: creating antibodies to HIV vif will enable apobec3G to turn HIV-infection into a benign problem Med. Hypotheses 64 261 263 1:STN:280:DC%2BD2cnjt1Oqug%3D%3D 10.1016/j.mehy.2004.07.015 15607551 (Pubitemid 40022659)
-
(2005)
Medical Hypotheses
, vol.64
, Issue.2
, pp. 261-263
-
-
Jeffrey Fessel, W.1
-
13
-
-
45849140886
-
Mechanical and biochemical modeling of cortical oscillations in spreading cells
-
1:CAS:528:DC%2BD1cXmvFKgsbY%3D 10.1529/biophysj.107.121335 18326667
-
M Kapustina GE Weinreb N Costigliola Z Rajfur K Jacobson, et al. 2008 Mechanical and biochemical modeling of cortical oscillations in spreading cells Biophys. J. 94 4605 4620 1:CAS:528:DC%2BD1cXmvFKgsbY%3D 10.1529/biophysj.107. 121335 18326667
-
(2008)
Biophys. J.
, vol.94
, pp. 4605-4620
-
-
Kapustina, M.1
Weinreb, G.E.2
Costigliola, N.3
Rajfur, Z.4
Jacobson, K.5
-
14
-
-
70350228452
-
RAS mutations affect tumor necrosis factor-induced apoptosis in colon carcinoma cells via ERK-modulatory negative and positive feedback circuits along with non-ERK pathway effects
-
1:CAS:528:DC%2BD1MXht1ynu7%2FN 10.1158/0008-5472.CAN-09-1921 19789336
-
PK Kreeger R Mandhana SK Alford KM Haigis DA Lauffenburger 2009 RAS mutations affect tumor necrosis factor-induced apoptosis in colon carcinoma cells via ERK-modulatory negative and positive feedback circuits along with non-ERK pathway effects Cancer Res. 69 8191 8199 1:CAS:528:DC%2BD1MXht1ynu7%2FN 10.1158/0008-5472.CAN-09-1921 19789336
-
(2009)
Cancer Res.
, vol.69
, pp. 8191-8199
-
-
Kreeger, P.K.1
Mandhana, R.2
Alford, S.K.3
Haigis, K.M.4
Lauffenburger, D.A.5
-
15
-
-
0034773966
-
Autoregulation of the human liver X receptor α promoter
-
DOI 10.1128/MCB.21.22.7558-7568.2001
-
BA Laffitte SB Joseph R Walczak L Pei DC Wilpitz, et al. 2001 Autoregulation of the human liver X receptor alpha promoter Mol. Cell. Biol. 21 7558 7568 1:CAS:528:DC%2BD3MXnvVWlsLY%3D 10.1128/MCB.21.22.7558-7568.2001 11604492 (Pubitemid 32988767)
-
(2001)
Molecular and Cellular Biology
, vol.21
, Issue.22
, pp. 7558-7568
-
-
Laffitte, B.A.1
Joseph, S.B.2
Walczak, R.3
Pei, L.4
Wilpitz, D.C.5
Collins, J.L.6
Tontonoz, P.7
-
16
-
-
4243067196
-
The roles of APC and axin derived from experimental and theoretical analysis of the Wnt pathway
-
DOI 10.1371/journal.pbio.0000010
-
E Lee A Salic R Kruger R Heinrich MW Kirschner 2003 The roles of APC and Axin derived from experimental and theoretical analysis of the Wnt pathway PLoS Biol. 1 E10 10.1371/journal.pbio.0000010 14551908 (Pubitemid 39112198)
-
(2003)
PLoS Biology
, vol.1
, Issue.1
-
-
Lee, E.1
Salic, A.2
Kruger, R.3
Heinrich, R.4
Kirschner, M.W.5
-
17
-
-
44949247269
-
Dynamic analysis of integrated signaling, metabolic, and regulatory networks
-
DOI 10.1371/journal.pcbi.1000086
-
JM Lee EP Gianchandani JA Eddy JA Papin 2008 Dynamic analysis of integrated signaling, metabolic, and regulatory networks PLoS Comput. Biol. 4 e1000086 10.1371/journal.pcbi.1000086 18483615 (Pubitemid 351811548)
-
(2008)
PLoS Computational Biology
, vol.4
, Issue.5
-
-
Min Lee, J.1
Gianchandani, E.P.2
Eddy, J.A.3
Papin, J.A.4
-
18
-
-
68749118345
-
Defining network topologies that can achieve biochemical adaptation
-
1:CAS:528:DC%2BD1MXhsVCjs7rL 10.1016/j.cell.2009.06.013 19703401
-
W Ma A Trusina H El-Samad WA Lim C Tang 2009 Defining network topologies that can achieve biochemical adaptation Cell 138 760 773 1:CAS:528: DC%2BD1MXhsVCjs7rL 10.1016/j.cell.2009.06.013 19703401
-
(2009)
Cell
, vol.138
, pp. 760-773
-
-
Ma, W.1
Trusina, A.2
El-Samad, H.3
Lim, W.A.4
Tang, C.5
-
19
-
-
34249694937
-
Dimerization of VEGF receptors and implications for signal transduction: A computational study
-
DOI 10.1016/j.bpc.2007.03.010, PII S0301462207000798
-
F Mac Gabhann AS Popel 2007 Dimerization of VEGF receptors and implications for signal transduction: a computational study Biophys. Chem. 128 125 139 1:CAS:528:DC%2BD2sXmtVKjtLs%3D 10.1016/j.bpc.2007.03.010 17442480 (Pubitemid 46843440)
-
(2007)
Biophysical Chemistry
, vol.128
, Issue.2-3
, pp. 125-139
-
-
Mac Gabhann, F.1
Popel, A.S.2
-
20
-
-
33846208252
-
The nuclear receptor LXR is a glucose sensor
-
DOI 10.1038/nature05449, PII NATURE05449
-
N Mitro PA Mak L Vargas C Godio E Hampton, et al. 2007 The nuclear receptor LXR is a glucose sensor Nature 445 219 223 1:CAS:528: DC%2BD2sXjtFKjtg%3D%3D 10.1038/nature05449 17187055 (Pubitemid 46095727)
-
(2007)
Nature
, vol.445
, Issue.7124
, pp. 219-223
-
-
Mitro, N.1
Mak, P.A.2
Vargas, L.3
Godio, C.4
Hampton, E.5
Molteni, V.6
Kreusch, A.7
Saez, E.8
-
21
-
-
2942564086
-
Multicellular simulation predicts microvascular patterning and in silico tissue assembly
-
1:CAS:528:DC%2BD2cXjtVyrs7c%3D 14766791
-
SM Peirce EJ Van Gieson TC Skalak 2004 Multicellular simulation predicts microvascular patterning and in silico tissue assembly FASEB J. 18 731 733 1:CAS:528:DC%2BD2cXjtVyrs7c%3D 14766791
-
(2004)
FASEB J.
, vol.18
, pp. 731-733
-
-
Peirce, S.M.1
Van Gieson, E.J.2
Skalak, T.C.3
-
22
-
-
43049112747
-
Protein phosphatase 2A (PP2A), a drugable tumor suppressor in Ph1(+) leukemias
-
1:CAS:528:DC%2BD1cXlt1CktL8%3D 10.1007/s10555-008-9119-x 18213449
-
D Perrotti P Neviani 2008 Protein phosphatase 2A (PP2A), a drugable tumor suppressor in Ph1(+) leukemias Cancer Metastasis Rev. 27 159 168 1:CAS:528:DC%2BD1cXlt1CktL8%3D 10.1007/s10555-008-9119-x 18213449
-
(2008)
Cancer Metastasis Rev.
, vol.27
, pp. 159-168
-
-
Perrotti, D.1
Neviani, P.2
-
23
-
-
50949128127
-
Partial resistance to peroxisome proliferator-activated receptor-alpha agonists in ZDF rats is associated with defective hepatic mitochondrial metabolism
-
1:CAS:528:DC%2BD1cXps1Oisro%3D 10.2337/db08-0226 18469201
-
S Satapati T He T Inagaki M Potthoff ME Merritt, et al. 2008 Partial resistance to peroxisome proliferator-activated receptor-alpha agonists in ZDF rats is associated with defective hepatic mitochondrial metabolism Diabetes 57 2012 2021 1:CAS:528:DC%2BD1cXps1Oisro%3D 10.2337/db08-0226 18469201
-
(2008)
Diabetes
, vol.57
, pp. 2012-2021
-
-
Satapati, S.1
He, T.2
Inagaki, T.3
Potthoff, M.4
Merritt, M.E.5
-
24
-
-
69849115198
-
Therapeutically targeting ErbB3: A key node in ligand-induced activation of the ErbB receptor-PI3K axis
-
10.1126/scisignal.2000352 19567914
-
B Schoeberl EA Pace JB Fitzgerald BD Harms L Xu, et al. 2009 Therapeutically targeting ErbB3: a key node in ligand-induced activation of the ErbB receptor-PI3K axis Sci. Signal 2 ra31 10.1126/scisignal.2000352 19567914
-
(2009)
Sci. Signal
, vol.2
, pp. 31
-
-
Schoeberl, B.1
Pace, E.A.2
Fitzgerald, J.B.3
Harms, B.D.4
Xu, L.5
-
25
-
-
0030057564
-
Regulation of peroxisome proliferator-activated receptor-α mRNA in rat liver
-
DOI 10.1006/abbi.1996.0077
-
PF Sterchele H Sun RE Peterson JP Vanden Heuvel 1996 Regulation of peroxisome proliferator-activated receptor-alpha mRNA in rat liver Arch. Biochem. Biophys. 326 281 289 1:CAS:528:DyaK28XhtFajsbY%3D 10.1006/abbi.1996. 0077 8611035 (Pubitemid 26060145)
-
(1996)
Archives of Biochemistry and Biophysics
, vol.326
, Issue.2
, pp. 281-289
-
-
Sterchele, P.F.1
Sun, H.2
Peterson, R.E.3
Vanden Heuvel, J.P.4
-
26
-
-
35348988164
-
Network analysis of oncogenic Ras activation in cancer
-
DOI 10.1126/science.1144642
-
EC Stites PC Trampont Z Ma KS Ravichandran 2007 Network analysis of oncogenic Ras activation in cancer Science 318 463 467 1:CAS:528: DC%2BD2sXhtFOjtbzI 10.1126/science.1144642 17947584 (Pubitemid 47614534)
-
(2007)
Science
, vol.318
, Issue.5849
, pp. 463-467
-
-
Stites, E.C.1
Trampont, P.C.2
Ma, Z.3
Ravichandran, K.S.4
-
27
-
-
0034453225
-
Cross-talk between fatty acid and cholesterol metabolism mediated by liver X receptor-α
-
DOI 10.1210/me.14.5.741
-
KA Tobin HH Steineger S Alberti O Spydevold J Auwerx, et al. 2000 Cross-talk between fatty acid and cholesterol metabolism mediated by liver X receptor-alpha Mol. Endocrinol. 14 741 752 1:CAS:528:DC%2BD3cXnt1Wgtrc%3D 10.1210/me.14.5.741 10809236 (Pubitemid 32266072)
-
(2000)
Molecular Endocrinology
, vol.14
, Issue.5
, pp. 741-752
-
-
Tobin, K.A.R.1
Steineger, H.H.2
Albert, S.3
Spydevold, O.4
Auwerx, J.5
Gustafsson, J.-A.6
Nebb, H.I.7
-
28
-
-
0025239660
-
Angiotensin II-forming pathways in normal and failing human hearts
-
H Urata B Healy RW Stewart FM Bumpus A Husain 1990 Angiotensin II-forming pathways in normal and failing human hearts Circ. Res. 66 883 890 1:CAS:528:DyaK3cXktVequ7Y%3D 2156635 (Pubitemid 20126420)
-
(1990)
Circulation Research
, vol.66
, Issue.4
, pp. 883-890
-
-
Urata, H.1
Healy, B.2
Stewart, R.W.3
Bumpus, F.M.4
Husain, A.5
-
29
-
-
0032505066
-
Interactions controlling the assembly of nuclear-receptor heterodimers and co-activators
-
DOI 10.1038/26040
-
S Westin R Kurokawa RT Nolte GB Wisely EM McInerney, et al. 1998 Interactions controlling the assembly of nuclear-receptor heterodimers and co-activators Nature 395 199 202 1:CAS:528:DyaK1cXmtVCjtbc%3D 10.1038/26040 9744281 (Pubitemid 28425662)
-
(1998)
Nature
, vol.395
, Issue.6698
, pp. 199-202
-
-
Westin, S.1
Kurokawa, R.2
Nolte, R.T.3
Wisely, G.B.4
McInerney, E.M.5
Rose, D.W.6
Milburn, M.V.7
Rosenfeld, M.G.8
Glass, C.K.9
-
30
-
-
12444256363
-
Cross-talk between peroxisome proliferator-activated receptor (PPAR) α and liver X receptor (LXR) in nutritional regulation of fatty acid metabolism. I. PPARS suppress sterol regulatory element binding protein-1c promoter through inhibition of LXR signaling
-
DOI 10.1210/me.2002-0190
-
T Yoshikawa T Ide H Shimano N Yahagi M Amemiya-Kudo, et al. 2003 Cross-talk between peroxisome proliferator-activated receptor (PPAR) alpha and liver X receptor (LXR) in nutritional regulation of fatty acid metabolism. I. PPARs suppress sterol regulatory element binding protein-1c promoter through inhibition of LXR signaling Mol. Endocrinol. 17 1240 1254 1:CAS:528: DC%2BD3sXlt1Kruro%3D 10.1210/me.2002-0190 12730331 (Pubitemid 36819948)
-
(2003)
Molecular Endocrinology
, vol.17
, Issue.7
, pp. 1240-1254
-
-
Yoshikawa, T.1
Ide, T.2
Shimano, H.3
Yahagi, N.4
Amemiya-Kudo, M.5
Matsuzaka, T.6
Yatoh, S.7
Kitamine, T.8
Okazaki, H.9
Tamura, Y.10
Sekiya, M.11
Takahashi, A.12
Hasty, A.H.13
Sato, R.14
Sone, H.15
Osuga, J.-I.16
Ishibashi, S.17
Yamada, N.18
-
31
-
-
14144255498
-
Ligand-binding regulation of LXR/RXR and LXR/PPAR heterodimerizations: SPR technology-based kinetic analysis correlated with molecular dynamics simulation
-
DOI 10.1110/ps.04951405
-
L Yue F Ye C Gui H Luo J Cai, et al. 2005 Ligand-binding regulation of LXR/RXR and LXR/PPAR heterodimerizations: SPR technology-based kinetic analysis correlated with molecular dynamics simulation Protein Sci. 14 812 822 1:CAS:528:DC%2BD2MXit1Snsbg%3D 10.1110/ps.04951405 15722453 (Pubitemid 40283920)
-
(2005)
Protein Science
, vol.14
, Issue.3
, pp. 812-822
-
-
Yue, L.1
Ye, F.2
Gui, C.3
Luo, H.4
Cai, J.5
Shen, J.6
Chen, K.7
Shen, X.8
Jiang, H.9
|