Global transcriptional analysis of spontaneous sakacin p-resistant mutant strains of Listeria monocytogenes during growth on different sugars

PLoS ONE

Volumn 6, Issue 1, 2011, Pages

  Tessema, Girum Tadesse ^a,b   Møretrø, Trond ^a   Snipen, Lars ^b   Axelsson, Lars ^a   Naterstad, Kristine ^a  

^a NOFIMA   (Norway)

^b NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATED CARBON; BACTERIOCIN; CELLOBIOSE; MANNOSE; SAKACIN P; UNCLASSIFIED DRUG; CARBOHYDRATE; PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE; SAKACIN P PROTEIN, LACTOBACILLUS;

ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIAL VIRULENCE; BACTERIOPHAGE; BACTERIUM MUTANT; CONTROLLED STUDY; ENERGY METABOLISM; GENE CONTROL; LISTERIA MONOCYTOGENES; MICROARRAY ANALYSIS; NONHUMAN; OPERON; PHENOTYPE; TRANSCRIPTOMICS; WILD TYPE; DRUG EFFECT; DRUG RESISTANCE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MUTATION;

LISTERIA MONOCYTOGENES;

BACTERIOCINS; CARBOHYDRATES; DRUG RESISTANCE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, BACTERIAL; LISTERIA MONOCYTOGENES; MUTATION; PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE SYSTEM; TRANSCRIPTION, GENETIC;

EID: 79251572965     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0016192     Document Type: Article

References (60)

1. Mead PS, Slutsker L, Dietz V, McCaig LF, Bresee JS, et al. (1999) Food-related illness and death in the United States. Emerg Infect Dis 5: 607-625.
2. Allerberger F, Wagner M (2010) Listeriosis: a resurgent foodborne infection. Clin Microbiol Infect 16: 16-23.
3. Ryser TE, Marth EH (2007) Listeria, listeriosis, and food safety. Boca RatonFL: Taylor and Francis CRC Press.
4. Galvez A, Abriouel H, Lopez RL, Omar NB (2007) Bacteriocin-based strategies for food biopreservation. Int J Food Microbiol 120: 51-70.
5. Guinane CM, Cotter PD, Hill C, Ross RP (2005) Microbial solutions to microbial problems; lactococcal bacteriocins for the control of undesirable biota in food. J Appl Microbiol 98: 1316-1325.
6. Drider D, Fimland G, Hechard Y, McMullen LM, Prevost H (2006) The continuing story of class IIa bacteriocins. Microbiol Mol Biol Rev 70: 564-582.
7. Nes IF, Yoon SS, Diep DB (2007) Ribosomally synthesiszed antimicrobial peptides (bacteriocins) in lactic acid bacteria: a review. Food Sci Biotechnol 16: 675-690.
8. Nissen-Meyer J, Rogne P, Oppegard C, Haugen HS, Kristiansen PE (2009) Structure-function relationships of the non-lanthionine-containing peptide (class II) bacteriocins produced by gram-positive bacteria. Curr Pharm Biotechnol 10: 19-37.
9. Dykes GA, Hastings JW (1998) Fitness costs associated with class IIa bacteriocin resistance in Listeria monocytogenes B73. Lett Appl Microbiol 26: 5-8.
10. Gravesen A, Jydegaard Axelsen A-M, Mendes da Silva J, Hansen TB, Knochel S (2002) Frequency of bacteriocin resistance development and associated fitness costs in Listeria monocytogenes. Appl Environ Microbiol 68: 756-764.
11. 54-dependent PTS permease of the mannose family is responsible for sensitivity of Listeria monocytogenes to mesentericin Y105. Microbiology 147: 3263-3269.
12. Diep DB, Skaugen M, Salehian Z, Holo H, Nes IF (2007) Common mechanisms of target cell recognition and immunity for class II bacteriocins. Proc Natl Acad Sci USA 104: 2384-2389.
13. Ramnath M, Beukes M, Tamura K, Hastings JW (2000) Absence of a putative mannose-specific phosphotransferase system enzyme IIAB component in a leucocin A-resistant strain of Listeria monocytogenes, as shown by two-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Appl Environ Microbiol 66: 3098-3101.
14. Arous S, Dalet K, Hechard Y (2004) Involvement of the mpo operon in resistance to class IIa bacteriocins in Listeria monocytogenes. FEMS Microbiol Lett 238: 37-41.
15. Vadyvaloo V, Arous S, Gravesen A, Hechard Y, Chauhan-Haubrock R, et al. (2004) Cell-surface alterations in class IIa bacteriocin-resistant Listeria monocytogenes strains. Microbiology 150: 3025-3033.
16. 54-dependent genes in Enterococcus faecalis: a mannose PTS permease (EIIMan) is involved in sensitivity to a bacteriocin, mesentericin Y105. Microbiology 147: 1575-1580.
17. Kjos M, Salehian Z, Nes IF, Diep DB (2010) An extracellular loop of the mannose phosphotransferase system component IIC is responsible for specific targeting by class IIa bacteriocins. J Bacteriol;In press.
18. Opsata M, Nes I, Holo H (2010) Class IIa bacteriocin resistance in Enterococcus faecalis V583: the mannose PTS operon mediates global transcriptional responses. BMC Microbiol 10: 224.
19. Gravesen A, Kallipolitis B, Holmstrom K, Hoiby PE, Ramnath M, et al. (2004) pbp2229-mediated nisin resistance mechanism in Listeria monocytogenes confers cross-protection to class IIa bacteriocins and affects virulence gene expression. Appl Environ Microbiol 70: 1669-1679.
20. Tessema GT, Moretro T, Kohler A, Axelsson L, Naterstad K (2009) Complex phenotypic and genotypic responses of Listeria monocytogenes strains exposed to the class IIa bacteriocin sakacin P. Appl Environ Microbiol 75: 6973-6980.
21. D'Angelis CEM, Polizello ACM, Nonato MC, Spadaro ACC, Martinis ECPD (2009) Purification, characterization and N-terminal amino acid sequencing of sakacin 1, a bacteriocin produced by Lactobacillus sakei 1. J Food Saf 29: 636-649.
22. Martinez RCR, De Martinis ECP (2005) Evaluation of bacteriocin-producing Lactobacillus sakei 1 against Listeria monocytogenes 1/2a growth and haemolytic activity. Braz J Microbiol 36: 83-87.
23. Vignolo G, Palacios J, Farias ME, Sesma F, Schillinger U, et al. (2000) Combined effect of bacteriocins on the survival of various Listeria species in broth and meat system. Curr Microbiol 41: 410-416.
24. Rodriguez JM, Martinez MI, Kok J (2002) Pediocin PA-1, a wide-spectrum bacteriocin from lactic acid bacteria. Crit Rev Food Sci Nutr 42: 91-121.
25. Toledo-Arana A, Dussurget O, Nikitas G, Sesto N, Guet-Revillet H, et al. (2009) The Listeria transcriptional landscape from saprophytism to virulence. Nature 459: 950-956.
26. Stoll R, Goebel W (2010) The major PEP-phosphotransferase systems (PTSs) for glucose, mannose and cellobiose of Listeria monocytogenes, and their significance for extra- and intracellular growth. Microbiology 156: 1069-1083.
27. Kjos M, Nes IF, Diep DB (2009) Class II one-peptide bacteriocins target a phylogenetically defined subgroup of mannose phosphotransferase systems on sensitive cells. Microbiology 155: 2949-2961.
28. Gravesen A, Ramnath M, Rechinger KB, Andersen N, Jansch L, et al. (2002) High-level resistance to class IIa bacteriocins is associated with one general mechanism in Listeria monocytogenes. Microbiology 148: 2361-2369.
29. Robichon D, Gouin E, Debarbouille M, Cossart P, Cenatiempo Y, et al. (1997) The rpoN (s54) gene from Listeria monocytogenes is involved in resistance to mesentericin Y105, an antibacterial peptide from Leuconostoc mesenteroides. J Bacteriol 179: 7591-7594.
30. Larsen MH, Kallipolitis BH, Christiansen JK, Olsen JE, Ingmer H (2006) The response regulator ResD modulates virulence gene expression in response to carbohydrates in Listeria monocytogenes. Mol Microbiol 61: 1622-1635.
31. Vu-Khac H, Miller KW (2009) Regulation of mannose phosphotransferase system permease and virulence gene expression in Listeria monocytogenes by the EIIt Man transporter. Appl Environ Microbiol 75: 6671-6678.
32. Stoll R, Mertins S, Joseph B, Muller-Altrock S, Goebel W (2008) Modulation of PrfA activity in Listeria monocytogenes upon growth in different culture media. Microbiology 154: 3856-3876.
33. Vadyvaloo V, Hastings JW, van der Merwe MJ, Rautenbach M (2002) Membranes of class IIa bacteriocin-resistant Listeria monocytogenes cells contain increased levels of desaturated and short-acyl-chain phosphatidylglycerols. Appl Environ Microbiol 68: 5223-5230.
34. Naghmouchi K, Kheadr E, Lacroix C, Fliss I (2007) Class I/Class IIa bacteriocin cross-resistance phenomenon in Listeria monocytogenes. Food Microbiol 24: 718-727.
35. Rajashekara G, Drozd M, Gangaiah D, Jeon B, Liu Z, et al. (2009) Functional characterization of the twin-arginine translocation system in Campylobacter jejuni. Foodborne Pathog Dis 6: 935-945.
36. McDonough JA, Hacker KE, Flores AR, Pavelka MS, Jr., Braunstein M (2005) The twin-argininetranslocation pathway of Mycobacterium smegmatis is functionaland equired for the export of mycobacterial ß-lactamases. J Bacteriol 187: 7667-7679.
37. Miwa Y, Nakata A, Ogiwara A, Yamamoto M, Fujita Y (2000) Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis. Nucleic Acids Res 28: 1206-1210.
38. Mertins S, Joseph B, Goetz M, Ecke R, Seidel G, et al. (2007) Interference of components of the phosphoenolpyruvate phosphotransferase system with the central virulence gene regulator PrfA of Listeria monocytogenes. J Bacteriol 189: 473-490.
39. Kim HJ, Mittal M, Sonenshein AL (2006) CcpC-dependent regulation of citB and lmo0847 in Listeria monocytogenes. J Bacteriol 188: 179-190.
40. Fujita Y (2009) Carbon catabolite control of the metabolic network in Bacillus subtilis. Biosci Biotechnol Biochem 73: 245-259.
41. Glc in regulation of energy metabolism, biofilm development, and competence in Streptococcus mutans. J Bacteriol 188: 3748-3756.
42. Stevens MJA, Molenaar D, de Jong A, De Vos WM, Kleerebezem M (2010) Involvement of the mannose phosphotransferase system of Lactobacillus plantarum WCFS1 in peroxide stress tolerance. Appl Environ Microbiol 76: 3748-3752.
43. Liu D (2008) Handbook of Listeria Monocytogenes. Boca RatonFL: Taylor and Francis CRC Press.
44. Korner H, Sofia HJ, Zumft WG (2003) Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs. Fems Microbiology Reviews 27: 559-592.
45. Mandin P, Fsihi H, Dussurget O, Vergassola M, Milohanic E, et al. (2005) VirR, a response regulator critical for Listeria monocytogenes virulence. Mol Microbiol 57: 1367-1380.
46. Bierne H, Garandeau C, Pucciarelli MG, Sabet C, Newton S, et al. (2004) Sortase B, a new class of sortase in Listeria monocytogenes. J Bacteriol 186: 1972-1982.
47. Carlton RM, Noordman WH, Biswas B, de Meester ED, Loessner MJ (2005) Bacteriophage P100 for control of Listeria monocytogenes in foods: genome sequence, bioinformatic analyses, oral toxicity study, and application. Regul Toxicol Pharmacol 43: 301-312.
48. Soni KA, Nannapaneni R, Hagens S (2009) Reduction of Listeria monocytogenes on the surface of fresh channel catfish fillets by bacteriophage Listex P100. Foodborne Pathog Dis 7: 427-434.
49. Elliott J, Arber W (1978) Escherichia coli mutants which block phage lambda DNA injection coincide with ptsM which determines a component of a sugar transport system. Mol Gen Genet 161: 1-8.
50. Moretro T, Naterstad K, Wang E, Aasen IM, Chaillou S, et al. (2005) Sakacin P non-producing Lactobacillus sakei strains contain homologues of the sakacin P gene cluster. Res Microbiol 156: 949-960.
51. Katla T, Naterstad K, Vancanneyt M, Swings J, Axelsson L (2003) Differences in susceptibility of Listeria monocytogenes strains to sakacin P, sakacin A, pediocin PA-1, and nisin. Appl Environ Microbiol 69: 4431-4437.
52. Bennett HJ, Pearce DM, Glenn S, Taylor CM, Kuhn M, et al. (2007) Characterization of relA and codY mutants of Listeria monocytogenes: identification of the CodY regulon and its role in virulence. Mol Microbiol 63: 1453-1467.
53. Hinds J, Laing KG, Mangan JA, Butcher PD (2002) Glass slide microarrays for bacterial genomes. In: Wren B, Dorrell N, eds. Methods in microbiology: functional microbial genomics. San DiegoCA: Academic Press. pp 83-99.
54. Smyth GK (2005) Limma: linear models for microarray data. In: RGentleman, VCarey, SDudoit, RIrizarry, Huber W, eds. Bioinformatics and computational biology solutions using R and Bioconductor. New YorkNY: Springer. Pp 397-420.
55. Smyth GK, Speed T (2003) Normalization of cDNA microarray data. Methods 31: 265-273.
56. Smyth GK (2004) Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 3: 1-25.
57. Smyth GK, Michaud J, Scott HS (2005) Use of within-array replicate spots for assessing differential expression in microarray experiments. Bioinformatics 21: 2067-2075.
58. Dieterich G, Karst U, Fischer E, Wehland J, Jansch L (2006) LEGER: knowledge database and visualization tool for comparative genomics of pathogenic and non-pathogenic Listeria species. Nucl Acids Res 34: D402-406.
59. Coffey A, Rombouts F, Abee T (1996) Influence of environental parameters on phosphatidylcholine phospholipase C production in Listeria monocytogenes: a convenient method to differentiate L. monocytogenes from other Listeria species. Appl Environ Microbiol 62: 1252-1256.
60. Morey J, Ryan J, Van Dolah F (2006) Microarray validation: factors influencing correlation between oligonucleotide microarrays and real-time PCR. Biol Proced Online 8: 175-193.