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Volumn 11, Issue 3, 2011, Pages 469-480

Comprehensive proteomic and transcriptomic characterization of hepatic expression signatures affected in p14 liver conditional knockout mice

Author keywords

Animal proteomics; Cre recombinase; Liver regeneration; MAPK; Scaffold proteins

Indexed keywords

MITOGEN ACTIVATED PROTEIN KINASE; PROTEIN P14;

EID: 79251515784     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.201000400     Document Type: Article
Times cited : (4)

References (48)
  • 1
    • 0032422785 scopus 로고    scopus 로고
    • Structural organization of MAP-kinase signaling modules by scaffold proteins in yeast and mammals
    • Whitmarsh, A. J., Davis, R. J., Structural organization of MAP-kinase signaling modules by scaffold proteins in yeast and mammals. Trends Biochem. Sci. 1998, 23, 481-485.
    • (1998) Trends Biochem. Sci. , vol.23 , pp. 481-485
    • Whitmarsh, A.J.1    Davis, R.J.2
  • 2
    • 0035911147 scopus 로고    scopus 로고
    • A novel 14-kilodalton protein interacts with the mitogen-activated protein kinase scaffold mp1 on a late endosomal/lysosomal compartment
    • Wunderlich, W., Fialka, I., Teis, D., Alpi, A. et al., A novel 14-kilodalton protein interacts with the mitogen-activated protein kinase scaffold mp1 on a late endosomal/lysosomal compartment. J. Cell Biol. 2001, 152, 765-776.
    • (2001) J. Cell Biol. , vol.152 , pp. 765-776
    • Wunderlich, W.1    Fialka, I.2    Teis, D.3    Alpi, A.4
  • 3
    • 0036899420 scopus 로고    scopus 로고
    • Localization of the MP1-MAPK scaffold complex to endosomes is mediated by p14 and required for signal transduction
    • Teis, D., Wunderlich, W., Huber, L. A., Localization of the MP1-MAPK scaffold complex to endosomes is mediated by p14 and required for signal transduction. Dev. Cell 2002, 3, 803-814.
    • (2002) Dev. Cell , vol.3 , pp. 803-814
    • Teis, D.1    Wunderlich, W.2    Huber, L.A.3
  • 4
    • 3342936383 scopus 로고    scopus 로고
    • Crystal structure of the p14/MP1 scaffolding complex: how a twin couple attaches mitogen-activated protein kinase signaling to late endosomes
    • Kurzbauer, R., Teis, D., de Araujo, M. E., Maurer-Stroh, S. et al., Crystal structure of the p14/MP1 scaffolding complex: how a twin couple attaches mitogen-activated protein kinase signaling to late endosomes. Proc. Natl. Acad. Sci. USA 2004, 101, 10984-10989.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 10984-10989
    • Kurzbauer, R.1    Teis, D.2    de Araujo, M.E.3    Maurer-Stroh, S.4
  • 5
    • 33845709128 scopus 로고    scopus 로고
    • p14-MP1-MEK1 signaling regulates endosomal traffic and cellular proliferation during tissue homeostasis
    • Teis, D., Taub, N., Kurzbauer, R., Hilber, D. et al., p14-MP1-MEK1 signaling regulates endosomal traffic and cellular proliferation during tissue homeostasis. J. Cell Biol. 2006, 175, 861-868.
    • (2006) J. Cell Biol. , vol.175 , pp. 861-868
    • Teis, D.1    Taub, N.2    Kurzbauer, R.3    Hilber, D.4
  • 6
    • 2942726086 scopus 로고    scopus 로고
    • Dual and opposing roles of ERK in regulating G(1) and S-G(2)/M delays in A549 cells caused by hyperoxia
    • Ko, J. C., Wang, Y. T., Yang, J. L., Dual and opposing roles of ERK in regulating G(1) and S-G(2)/M delays in A549 cells caused by hyperoxia. Exp. Cell Res. 2004, 297, 472-483.
    • (2004) Exp. Cell Res. , vol.297 , pp. 472-483
    • Ko, J.C.1    Wang, Y.T.2    Yang, J.L.3
  • 7
    • 77951184824 scopus 로고    scopus 로고
    • Active Mek2 as a regulatory scaffold that promotes Pin1 binding to BPGAP1 to suppress BPGAP1-induced acute Erk activation and cell migration
    • Pan, C. Q., Liou, Y. C., Low, B. C., Active Mek2 as a regulatory scaffold that promotes Pin1 binding to BPGAP1 to suppress BPGAP1-induced acute Erk activation and cell migration. J. Cell Sci. 2010, 123, 903-916.
    • (2010) J. Cell Sci. , vol.123 , pp. 903-916
    • Pan, C.Q.1    Liou, Y.C.2    Low, B.C.3
  • 9
    • 0001677717 scopus 로고
    • Controlling the false discovery rate - a practical and powerful approach to multiple testing
    • Benjamini, Y., Hochberg, Y., Controlling the false discovery rate - a practical and powerful approach to multiple testing. J. Roy. Stat. Soc. B Met. 1995, 57, 289-300.
    • (1995) J. Roy. Stat. Soc. B Met. , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 10
    • 0033643558 scopus 로고    scopus 로고
    • Sample preparation by SDS/PAGE and in-gel digestion
    • Hellman, U., Sample preparation by SDS/PAGE and in-gel digestion. EXS 2000, 88, 43-54.
    • (2000) EXS , vol.88 , pp. 43-54
    • Hellman, U.1
  • 11
    • 33644542448 scopus 로고    scopus 로고
    • Identification of glucocorticoid-reponse genes in children with acute lymphoblastic leukemia
    • Schmidt, S. R. J., Riml, S., Ploner, C., Jesacher, S. et al., Identification of glucocorticoid-reponse genes in children with acute lymphoblastic leukemia. Blood 2006, 107, 2061-2069.
    • (2006) Blood , vol.107 , pp. 2061-2069
    • Schmidt, S.R.J.1    Riml, S.2    Ploner, C.3    Jesacher, S.4
  • 12
    • 28744458859 scopus 로고    scopus 로고
    • Bioconductor: open software development for computational biology and bioinformatics
    • Gentleman, R. C., Carey, V. J., Bates, D. M., Bolstad, B. et al., Bioconductor: open software development for computational biology and bioinformatics. Genome Biol. 2004, 5, R80.
    • (2004) Genome Biol. , vol.5
    • Gentleman, R.C.1    Carey, V.J.2    Bates, D.M.3    Bolstad, B.4
  • 14
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Smyth, G. K., Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 2004, 3, Article 3.
    • (2004) Stat. Appl. Genet. Mol. Biol. , vol.3
    • Smyth, G.K.1
  • 16
    • 33645978405 scopus 로고    scopus 로고
    • Design-based stereological estimation of hepatocyte number, by combining the smooth optical fractionator and immunocytochemistry with anti-carcinoembryonic antigen polyclonal antibodies
    • Marcos, R., Monteiro, R. A., Rocha, E., Design-based stereological estimation of hepatocyte number, by combining the smooth optical fractionator and immunocytochemistry with anti-carcinoembryonic antigen polyclonal antibodies. Liver Int. 2006, 26, 116-124.
    • (2006) Liver Int. , vol.26 , pp. 116-124
    • Marcos, R.1    Monteiro, R.A.2    Rocha, E.3
  • 17
    • 0031688717 scopus 로고    scopus 로고
    • Analysis of liver regeneration in mice lacking type 1 or type 2 tumor necrosis factor receptor: requirement for type 1 but not type 2 receptor
    • Yamada, Y., Webber, E. M., Kirillova, I., Peschon, J. J., Fausto, N., Analysis of liver regeneration in mice lacking type 1 or type 2 tumor necrosis factor receptor: requirement for type 1 but not type 2 receptor. Hepatology 1998, 28, 959-970.
    • (1998) Hepatology , vol.28 , pp. 959-970
    • Yamada, Y.1    Webber, E.M.2    Kirillova, I.3    Peschon, J.J.4    Fausto, N.5
  • 18
    • 0031947715 scopus 로고    scopus 로고
    • Steatohepatitis: a tale of two "hits"?
    • Day, C. P., James, O. F., Steatohepatitis: a tale of two "hits"? Gastroenterology 1998, 114, 842-845.
    • (1998) Gastroenterology , vol.114 , pp. 842-845
    • Day, C.P.1    James, O.F.2
  • 19
    • 0037076433 scopus 로고    scopus 로고
    • The c-Myc target gene PRDX3 is required for mitochondrial homeostasis and neoplastic transformation
    • Wonsey, D. R., Zeller, K. I., Dang, C. V., The c-Myc target gene PRDX3 is required for mitochondrial homeostasis and neoplastic transformation. Proc. Natl. Acad. Sci. USA 2002, 99, 6649-6654.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 6649-6654
    • Wonsey, D.R.1    Zeller, K.I.2    Dang, C.V.3
  • 20
    • 0141767086 scopus 로고    scopus 로고
    • A rapid and sensitive cytotoxicity screening assay for trichothecenes in cereal samples
    • Widestrand, J., Lundh, T., Pettersson, H., Lindberg, J. E., A rapid and sensitive cytotoxicity screening assay for trichothecenes in cereal samples. Food Chem. Toxicol. 2003, 41, 1307-1313.
    • (2003) Food Chem. Toxicol. , vol.41 , pp. 1307-1313
    • Widestrand, J.1    Lundh, T.2    Pettersson, H.3    Lindberg, J.E.4
  • 21
    • 0023502547 scopus 로고
    • Turnover of cytokeratin polypeptides in mouse hepatocytes
    • Denk, H., Lackinger, E., Zatloukal, K., Franke, W. W., Turnover of cytokeratin polypeptides in mouse hepatocytes. Exp. Cell Res. 1987, 173, 137-143.
    • (1987) Exp. Cell Res. , vol.173 , pp. 137-143
    • Denk, H.1    Lackinger, E.2    Zatloukal, K.3    Franke, W.W.4
  • 22
    • 0036468732 scopus 로고    scopus 로고
    • 'Hard' and 'soft' principles defining the structure, function and regulation of keratin intermediate filaments
    • Coulombe, P. A., Omary, M. B., 'Hard' and 'soft' principles defining the structure, function and regulation of keratin intermediate filaments. Curr. Opin. Cell Biol. 2002, 14, 110-122.
    • (2002) Curr. Opin. Cell Biol. , vol.14 , pp. 110-122
    • Coulombe, P.A.1    Omary, M.B.2
  • 23
    • 0037007011 scopus 로고    scopus 로고
    • Keratin binding to 14-3-3 proteins modulates keratin filaments and hepatocyte mitotic progression
    • Ku, N. O., Michie, S., Resurreccion, E. Z., Broome, R. L., Omary, M. B., Keratin binding to 14-3-3 proteins modulates keratin filaments and hepatocyte mitotic progression. Proc. Natl. Acad. Sci. USA 2002, 99, 4373-4378.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 4373-4378
    • Ku, N.O.1    Michie, S.2    Resurreccion, E.Z.3    Broome, R.L.4    Omary, M.B.5
  • 24
    • 0034194388 scopus 로고    scopus 로고
    • Keratins turn over by ubiquitination in a phosphorylation-modulated fashion
    • Ku, N. O., Omary, M. B., Keratins turn over by ubiquitination in a phosphorylation-modulated fashion. J. Cell Biol. 2000, 149, 547-552.
    • (2000) J. Cell Biol. , vol.149 , pp. 547-552
    • Ku, N.O.1    Omary, M.B.2
  • 25
    • 0037221681 scopus 로고    scopus 로고
    • Mixed lineage kinase LZK and antioxidant protein-1 activate NF-kappaB synergistically
    • Masaki, M., Ikeda, A., Shiraki, E., Oka, S., Kawasaki, T., Mixed lineage kinase LZK and antioxidant protein-1 activate NF-kappaB synergistically. Eur. J. Biochem. 2003, 270, 76-83.
    • (2003) Eur. J. Biochem. , vol.270 , pp. 76-83
    • Masaki, M.1    Ikeda, A.2    Shiraki, E.3    Oka, S.4    Kawasaki, T.5
  • 26
    • 0025374330 scopus 로고
    • Sequence of cDNA for rat cystathionine gamma-lyase and comparison of deduced amino acid sequence with related Escherichia coli enzymes
    • Erickson, P. F., Maxwell, I. H., Su, L. J., Baumann, M., Glode, L. M., Sequence of cDNA for rat cystathionine gamma-lyase and comparison of deduced amino acid sequence with related Escherichia coli enzymes. Biochem. J. 1990, 269, 335-340.
    • (1990) Biochem. J. , vol.269 , pp. 335-340
    • Erickson, P.F.1    Maxwell, I.H.2    Su, L.J.3    Baumann, M.4    Glode, L.M.5
  • 27
    • 0037927972 scopus 로고    scopus 로고
    • Hydrogen sulfide induces serum-independent cell cycle entry in nontransformed rat intestinal epithelial cells
    • Deplancke, B., Gaskins, H. R., Hydrogen sulfide induces serum-independent cell cycle entry in nontransformed rat intestinal epithelial cells. FASEB J. 2003, 17, 1310-1312.
    • (2003) FASEB J. , vol.17 , pp. 1310-1312
    • Deplancke, B.1    Gaskins, H.R.2
  • 28
    • 0025690517 scopus 로고
    • Effect of sulfurous (thermal) water on T lymphocyte proliferative response
    • Valitutti, S., Castellino, F., Musiani, P., Effect of sulfurous (thermal) water on T lymphocyte proliferative response. Ann. Allergy 1990, 65, 463-468.
    • (1990) Ann. Allergy , vol.65 , pp. 463-468
    • Valitutti, S.1    Castellino, F.2    Musiani, P.3
  • 29
    • 10344227212 scopus 로고    scopus 로고
    • Cystathionine gamma-lyase overexpression inhibits cell proliferation via a H2S-dependent modulation of ERK1/2 phosphorylation and p21Cip/WAK-1
    • Yang, G., Cao, K., Wu, L., Wang, R., Cystathionine gamma-lyase overexpression inhibits cell proliferation via a H2S-dependent modulation of ERK1/2 phosphorylation and p21Cip/WAK-1. J. Biol. Chem. 2004, 279, 49199-49205.
    • (2004) J. Biol. Chem. , vol.279 , pp. 49199-49205
    • Yang, G.1    Cao, K.2    Wu, L.3    Wang, R.4
  • 30
    • 2942527522 scopus 로고    scopus 로고
    • Aminoacylase 1 is a sphingosine kinase 1-interacting protein
    • Maceyka, M., Nava, V. E., Milstien, S., Spiegel, S., Aminoacylase 1 is a sphingosine kinase 1-interacting protein. FEBS Lett. 2004, 568, 30-34.
    • (2004) FEBS Lett. , vol.568 , pp. 30-34
    • Maceyka, M.1    Nava, V.E.2    Milstien, S.3    Spiegel, S.4
  • 31
    • 58949085533 scopus 로고    scopus 로고
    • Genome-wide analysis identifies a tumor suppressor role for aminoacylase 1 in iron-induced rat renal cell carcinoma
    • Zhong, Y., Onuki, J., Yamasaki, T., Ogawa, O. et al., Genome-wide analysis identifies a tumor suppressor role for aminoacylase 1 in iron-induced rat renal cell carcinoma. Carcinogenesis 2009, 30, 158-164.
    • (2009) Carcinogenesis , vol.30 , pp. 158-164
    • Zhong, Y.1    Onuki, J.2    Yamasaki, T.3    Ogawa, O.4
  • 32
    • 65649099808 scopus 로고    scopus 로고
    • Erk1/2 MAP kinases are required for epidermal G2/M progression
    • Dumesic, P. A., Scholl, F. A., Barragan, D. I., Khavari, P. A., Erk1/2 MAP kinases are required for epidermal G2/M progression. J. Cell Biol. 2009, 185, 409-422.
    • (2009) J. Cell Biol. , vol.185 , pp. 409-422
    • Dumesic, P.A.1    Scholl, F.A.2    Barragan, D.I.3    Khavari, P.A.4
  • 33
    • 55249112997 scopus 로고    scopus 로고
    • TC1 (C8orf4) is involved in ERK1/2 pathway-regulated G(1)- to S-phase transition
    • Wang, Y. D., Bian, G. H., Lv, X. Y., Zheng, R. et al., TC1 (C8orf4) is involved in ERK1/2 pathway-regulated G(1)- to S-phase transition. BMB Rep. 2008, 41, 733-738.
    • (2008) BMB Rep. , vol.41 , pp. 733-738
    • Wang, Y.D.1    Bian, G.H.2    Lv, X.Y.3    Zheng, R.4
  • 34
    • 0034949629 scopus 로고    scopus 로고
    • DNA replication licensing and human cell proliferation
    • Stoeber, K., Tlsty, T. D., Happerfield, L., Thomas, G. A. et al., DNA replication licensing and human cell proliferation. J. Cell Sci. 2001, 114, 2027-2041.
    • (2001) J. Cell Sci. , vol.114 , pp. 2027-2041
    • Stoeber, K.1    Tlsty, T.D.2    Happerfield, L.3    Thomas, G.A.4
  • 35
    • 29444432956 scopus 로고    scopus 로고
    • Depletion of minichromosome maintenance protein 5 in the zebrafish retina causes cell-cycle defect and apoptosis
    • Ryu, S., Holzschuh, J., Erhardt, S., Ettl, A. K., Driever, W., Depletion of minichromosome maintenance protein 5 in the zebrafish retina causes cell-cycle defect and apoptosis. Proc. Natl. Acad. Sci. USA 2005, 102, 18467-18472.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 18467-18472
    • Ryu, S.1    Holzschuh, J.2    Erhardt, S.3    Ettl, A.K.4    Driever, W.5
  • 36
    • 32344437791 scopus 로고    scopus 로고
    • Assay and functional properties of Rabkinesin-6/Rab6-KIFL/MKlp2 in cytokinesis
    • Neef, R., Gruneberg, U., Barr, F. A., Assay and functional properties of Rabkinesin-6/Rab6-KIFL/MKlp2 in cytokinesis. Methods Enzymol. 2005, 403, 618-628.
    • (2005) Methods Enzymol. , vol.403 , pp. 618-628
    • Neef, R.1    Gruneberg, U.2    Barr, F.A.3
  • 37
    • 0035079968 scopus 로고    scopus 로고
    • The human kinesin-like protein RB6K is under tight cell cycle control and is essential for cytokinesis
    • Fontijn, R. D., Goud, B., Echard, A., Jollivet, F. et al., The human kinesin-like protein RB6K is under tight cell cycle control and is essential for cytokinesis. Mol. Cell Biol. 2001, 21, 2944-2955.
    • (2001) Mol. Cell Biol. , vol.21 , pp. 2944-2955
    • Fontijn, R.D.1    Goud, B.2    Echard, A.3    Jollivet, F.4
  • 38
    • 0035931755 scopus 로고    scopus 로고
    • The Ndc80p complex from Saccharomyces cerevisiae contains conserved centromere components and has a function in chromosome segregation
    • Wigge, P. A., Kilmartin, J. V., The Ndc80p complex from Saccharomyces cerevisiae contains conserved centromere components and has a function in chromosome segregation. J. Cell Biol. 2001, 152, 349-360.
    • (2001) J. Cell Biol. , vol.152 , pp. 349-360
    • Wigge, P.A.1    Kilmartin, J.V.2
  • 39
    • 23044467274 scopus 로고    scopus 로고
    • Ckap2 regulates aneuploidy, cell cycling, and cell death in a p53-dependent manner
    • Tsuchihara, K., Lapin, V., Bakal, C., Okada, H. et al., Ckap2 regulates aneuploidy, cell cycling, and cell death in a p53-dependent manner. Cancer Res. 2005, 65, 6685-6691.
    • (2005) Cancer Res. , vol.65 , pp. 6685-6691
    • Tsuchihara, K.1    Lapin, V.2    Bakal, C.3    Okada, H.4
  • 40
    • 33746760027 scopus 로고    scopus 로고
    • A cytoskeleton-associated protein, TMAP/CKAP2, is involved in the proliferation of human foreskin fibroblasts
    • Jeon, S. M., Choi, B., Hong, K. U., Kim, E. et al., A cytoskeleton-associated protein, TMAP/CKAP2, is involved in the proliferation of human foreskin fibroblasts. Biochem. Biophys. Res. Commun. 2006, 348, 222-228.
    • (2006) Biochem. Biophys. Res. Commun. , vol.348 , pp. 222-228
    • Jeon, S.M.1    Choi, B.2    Hong, K.U.3    Kim, E.4
  • 41
    • 73649091133 scopus 로고    scopus 로고
    • Characterization of mitosis-specific phosphorylation of tumor-associated microtubule-associated protein
    • Hong, K. U., Kim, H. J., Bae, C. D., Park, J., Characterization of mitosis-specific phosphorylation of tumor-associated microtubule-associated protein. Exp. Mol. Med. 2009, 41, 832-840.
    • (2009) Exp. Mol. Med. , vol.41 , pp. 832-840
    • Hong, K.U.1    Kim, H.J.2    Bae, C.D.3    Park, J.4
  • 42
    • 0025745372 scopus 로고
    • Stathmin: a relay phosphoprotein for multiple signal transduction?
    • Sobel, A., Stathmin: a relay phosphoprotein for multiple signal transduction? Trends Biochem. Sci. 1991, 16, 301-305.
    • (1991) Trends Biochem. Sci. , vol.16 , pp. 301-305
    • Sobel, A.1
  • 44
    • 35248864084 scopus 로고    scopus 로고
    • Comprehensive expression profiling of tumor cell lines identifies molecular signatures of melanoma progression
    • Ryu, B., Kim, D. S., Deluca, A. M., Alani, R. M., Comprehensive expression profiling of tumor cell lines identifies molecular signatures of melanoma progression. PLoS One 2007, 2, e594.
    • (2007) PLoS One , vol.2
    • Ryu, B.1    Kim, D.S.2    Deluca, A.M.3    Alani, R.M.4
  • 45
    • 0034007745 scopus 로고    scopus 로고
    • Liver regeneration
    • Fausto, N., Liver regeneration. J. Hepatol. 2000, 32, 19-31.
    • (2000) J. Hepatol. , vol.32 , pp. 19-31
    • Fausto, N.1
  • 46
    • 5044232017 scopus 로고    scopus 로고
    • Liver regeneration: from myth to mechanism
    • Taub, R., Liver regeneration: from myth to mechanism. Nat. Rev. Mol. Cell. Biol. 2004, 5, 836-847.
    • (2004) Nat. Rev. Mol. Cell. Biol. , vol.5 , pp. 836-847
    • Taub, R.1
  • 47
    • 36048973747 scopus 로고    scopus 로고
    • The EGF receptor is required for efficient liver regeneration
    • Natarajan, A., Wagner, B., Sibilia, M., The EGF receptor is required for efficient liver regeneration. Proc. Natl. Acad. Sci. USA 2007, 104, 17081-17086.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 17081-17086
    • Natarajan, A.1    Wagner, B.2    Sibilia, M.3


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