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Volumn 21, Issue 8, 2010, Pages 1296-1312

Mobile protons versus mobile radicals: Gas-phase unimolecular chemistry of radical cations of cysteine-containing peptides

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; ATOMS; CARBON; CHEMICAL REACTIONS; ELECTROSPRAY IONIZATION; GASES; IONIZATION OF GASES; ISOMERS; MASS SPECTROMETRY; PEPTIDES; POSITIVE IONS; PROTONATION;

EID: 78651425110     PISSN: 10440305     EISSN: 18791123     Source Type: Journal    
DOI: 10.1016/j.jasms.2010.01.027     Document Type: Article
Times cited : (47)

References (81)
  • 2
    • 0001310329 scopus 로고
    • Sequence dependence of peptide fragmentation efficiency curves determined by electrospray ionization/surface-induced dissociation mass spectrometry
    • Jones, J. L.; Dongre, A. R.; Somogyi, A.; Wysocki, V. H. Sequence Dependence of Peptide Fragmentation Efficiency Curves Determined by Electrospray Ionization/Surface-Induced Dissociation Mass Spectrometry. J. Am. Chem. Soc. 1994, 116, 8368-8369.
    • (1994) J. Am. Chem. Soc. , vol.116 , pp. 8368-8369
    • Jones, J.L.1    Dongre, A.R.2    Somogyi, A.3    Wysocki, V.H.4
  • 3
    • 0029810698 scopus 로고    scopus 로고
    • Influence of peptide composition, gas-phase basicity, and chemical modification on fragmentation efficiency: Evidence for the mobile proton model
    • Dongre, A. R.; Jones, J. L.; Somogyi, A.; Wysocki, V. H. Influence of Peptide Composition, Gas-Phase Basicity, and Chemical Modification on Fragmentation Efficiency: Evidence for the Mobile Proton Model. J. Am. Chem. Soc. 1996, 118, 8365-8374.
    • (1996) J. Am. Chem. Soc. , vol.118 , pp. 8365-8374
    • Dongre, A.R.1    Jones, J.L.2    Somogyi, A.3    Wysocki, V.H.4
  • 5
    • 0034501099 scopus 로고    scopus 로고
    • Mobile and localized protons: A framework for understanding peptide dissociation
    • Wysocki, V. H.; Tsaprailis, G.; Smith, L. L.; Breci, L. A. Mobile and Localized Protons: A Framework for Understanding Peptide Dissociation. J. Mass Spectrom. 2000, 35, 1399-1406.
    • (2000) J. Mass Spectrom. , vol.35 , pp. 1399-1406
    • Wysocki, V.H.1    Tsaprailis, G.2    Smith, L.L.3    Breci, L.A.4
  • 6
    • 0034506736 scopus 로고    scopus 로고
    • The role of nucleophile-electrophile interactions in the unimolecular and bimolecular gas-phase ion chemistry of peptides and related systems
    • O'Hair, R. A. J. The Role of Nucleophile-Electrophile Interactions in the Unimolecular and Bimolecular Gas-Phase Ion Chemistry of Peptides and Related Systems. J. Mass Spectrom. 2000, 35, 1377-1381.
    • (2000) J. Mass Spectrom. , vol.35 , pp. 1377-1381
    • O'hair, R.A.J.1
  • 7
    • 68849096511 scopus 로고    scopus 로고
    • To b or Not to b: The ongoing saga of peptide b ions
    • Harrison, A. G. To b or Not to b: The Ongoing Saga of Peptide b Ions. Mass Spectrom. Rev. 2009, 28, 640-654.
    • (2009) Mass Spectrom. Rev. , vol.28 , pp. 640-654
    • Harrison, A.G.1
  • 8
    • 0034506737 scopus 로고    scopus 로고
    • Five-membered ring formation in unimolecular reactions of peptides: A key structural element controlling low-energy collision-induced dissociation of peptides
    • Schlosser, A.; Lehmann, W. D. Five-Membered Ring Formation in Unimolecular Reactions of Peptides: A Key Structural Element Controlling Low-Energy Collision-Induced Dissociation of Peptides. J. Mass Spectrom. 2000, 35, 1382-1390.
    • (2000) J. Mass Spectrom. , vol.35 , pp. 1382-1390
    • Schlosser, A.1    Lehmann, W.D.2
  • 9
    • 0034516862 scopus 로고    scopus 로고
    • Dissociation of the peptide bond in protonated peptides
    • Polce, M. J.; Ren, D.; Wesdemiotis, C. Dissociation of the Peptide Bond in Protonated Peptides. J. Mass Spectrom. 2000, 35, 1391-1398.
    • (2000) J. Mass Spectrom. , vol.35 , pp. 1391-1398
    • Polce, M.J.1    Ren, D.2    Wesdemiotis, C.3
  • 10
    • 21844457685 scopus 로고    scopus 로고
    • Fragmentation pathways of protonated peptides
    • Paizs, B.; Suhai, S. Fragmentation Pathways of Protonated Peptides. Mass Spectrom. Rev. 2005, 24, 508-548.
    • (2005) Mass Spectrom. Rev. , vol.24 , pp. 508-548
    • Paizs, B.1    Suhai, S.2
  • 11
    • 55249095084 scopus 로고    scopus 로고
    • Gas-phase peptide fragmentation: How understanding the fundamentals provides a springboard to developing new chemistry and novel proteomic tools
    • Barlow, C. K.; O'Hair, R. A. J. Gas-Phase Peptide Fragmentation: How Understanding the Fundamentals Provides a Springboard to Developing New Chemistry and Novel Proteomic Tools. J. Mass Spectrom. 2008, 43, 1301-1319.
    • (2008) J. Mass Spectrom. , vol.43 , pp. 1301-1319
    • Barlow, C.K.1    O'hair, R.A.J.2
  • 12
    • 59149100438 scopus 로고    scopus 로고
    • Review of factors that influence the abundance of ions produced in a tandem mass spectrometer and statistical methods for discovering these factors
    • Barton, S. J.; Whittaker, J. C. Review of Factors that Influence the Abundance of Ions Produced in a Tandem Mass Spectrometer and Statistical Methods for Discovering These Factors. Mass Spectrom. Rev. 2009, 28, 177-187.
    • (2009) Mass Spectrom. Rev. , vol.28 , pp. 177-187
    • Barton, S.J.1    Whittaker, J.C.2
  • 13
    • 0036684103 scopus 로고    scopus 로고
    • The influence of histidine on cleavage c-terminal to acidic residues in doubly protonated tryptic peptides
    • Huang, Y.; Wysocki, V. H.; Tabb, D. L.; Yates, J. R. The Influence of Histidine on Cleavage C-Terminal to Acidic Residues in Doubly Protonated Tryptic Peptides. Int. J. Mass Spectrom. 2002, 219, 233-244.
    • (2002) Int. J. Mass Spectrom. , vol.219 , pp. 233-244
    • Huang, Y.1    Wysocki, V.H.2    Tabb, D.L.3    Yates, J.R.4
  • 14
    • 0037353846 scopus 로고    scopus 로고
    • III statistical characterization of ion trap tandem mass spectra from doubly charged tryptic peptides
    • Tabb, D. L.; Smith, L. L.; Breci, L. A.; Wysocki, V. H.; Lin, D.; Yates, J. R. III Statistical Characterization of Ion Trap Tandem Mass Spectra from Doubly Charged Tryptic Peptides. Anal. Chem. 2003, 75, 1155-1163.
    • (2003) Anal. Chem. , vol.75 , pp. 1155-1163
    • Tabb, D.L.1    Smith, L.L.2    Breci, L.A.3    Wysocki, V.H.4    Lin, D.5    Yates, J.R.6
  • 15
    • 0038034116 scopus 로고    scopus 로고
    • Cleavage n-terminal to proline: Analysis of a database of peptide tandem mass spectra
    • Breci, L. A.; Tabb, D. L.; Yates, J. R. III; Wysocki, V. H. Cleavage N-Terminal to Proline: Analysis of a Database of Peptide Tandem Mass Spectra. Anal. Chem. 2003, 75, 1963-1971.
    • (2003) Anal. Chem. , vol.75 , pp. 1963-1971
    • Breci, L.A.1    Tabb, D.L.2    Yates III, J.R.3    Wysocki, V.H.4
  • 16
    • 0242653718 scopus 로고    scopus 로고
    • Mining a tandem mass spectrometry database to determine the trends and global factors influencing peptide fragmentation
    • Kapp, E. A.; Schutz, F.; Reid, G. E.; Eddes, J. S.; Moritz, R. L.; O'Hair, R. A. J.; Speed, T. P.; Simpson, R. J. Mining a Tandem Mass Spectrometry Database To Determine the Trends and Global Factors Influencing Peptide Fragmentation. Anal. Chem. 2003, 75, 6251-6264.
    • (2003) Anal. Chem. , vol.75 , pp. 6251-6264
    • Kapp, E.A.1    Schutz, F.2    Reid, G.E.3    Eddes, J.S.4    Moritz, R.L.5    O'hair, R.A.J.6    Speed, T.P.7    Simpson, R.J.8
  • 17
    • 1442324456 scopus 로고    scopus 로고
    • Influence of basic residue content on fragment ion peak intensities in low-energy collision-induced dissociation spectra of peptides
    • Tabb, D. L.; Huang, Y.; Wysocki, V. H.; Yates, J. R. III Influence of Basic Residue Content on Fragment Ion Peak Intensities in Low-Energy Collision-Induced Dissociation Spectra of Peptides. Anal. Chem. 2004, 76, 1243-1248.
    • (2004) Anal. Chem. , vol.76 , pp. 1243-1248
    • Tabb, D.L.1    Huang, Y.2    Wysocki, V.H.3    Yates III, J.R.4
  • 18
    • 0742305695 scopus 로고    scopus 로고
    • Intensity-based protein identification by machine learning from a library of tandem mass spectra
    • Elias, J. E.; Gibbons, F. D.; King, O. D.; Roth, F. P.; Gygi, S. P. Intensity-Based Protein Identification by Machine Learning from a Library of Tandem Mass Spectra. Nat. Biotechnol. 2004, 22, 214-219.
    • (2004) Nat. Biotechnol. , vol.22 , pp. 214-219
    • Elias, J.E.1    Gibbons, F.D.2    King, O.D.3    Roth, F.P.4    Gygi, S.P.5
  • 19
    • 20444459841 scopus 로고    scopus 로고
    • Statistical characterization of the charge state and residue dependence of low-energy CID peptide dissociation patterns
    • Huang, Y.; Triscari, J. M.; Tseng, G. C.; Pasa-Tolic, L.; Lipton, M. S.; Smith, R. D.; Wysocki, V. H. Statistical Characterization of the Charge State and Residue Dependence of Low-Energy CID Peptide Dissociation Patterns. Anal. Chem. 2005, 77, 5800-5813.
    • (2005) Anal. Chem. , vol.77 , pp. 5800-5813
    • Huang, Y.1    Triscari, J.M.2    Tseng, G.C.3    Pasa-Tolic, L.4    Lipton, M.S.5    Smith, R.D.6    Wysocki, V.H.7
  • 20
    • 34547732831 scopus 로고    scopus 로고
    • Using statistical models to identify factors that have a role in defining the abundance of ions produced by tandem MS
    • Barton, S. J.; Richardson, S.; Perkins, D. N.; Bellahn, I.; Bryant, T. N.; Whittaker, J. C. Using Statistical Models to Identify Factors That Have a Role in Defining the Abundance of Ions Produced by Tandem MS. Anal. Chem. (Washington, DC) 2007, 79, 5601-5607.
    • (2007) Anal. Chem. (Washington, DC) , vol.79 , pp. 5601-5607
    • Barton, S.J.1    Richardson, S.2    Perkins, D.N.3    Bellahn, I.4    Bryant, T.N.5    Whittaker, J.C.6
  • 21
    • 38649129381 scopus 로고    scopus 로고
    • A data-mining scheme for identifying peptide structural motifs responsible for different MS/MS fragmentation intensity patterns
    • Huang, Y.; Tseng, G. C.; Yuan, S.; Pasa-Tolic, L.; Lipton, M. S.; Smith, R. D.; Wysocki, V. H. A Data-Mining Scheme for Identifying Peptide Structural Motifs Responsible for Different MS/MS Fragmentation Intensity Patterns. J. Proteome Res. 2008, 7, 70-79.
    • (2008) J. Proteome Res. , vol.7 , pp. 70-79
    • Huang, Y.1    Tseng, G.C.2    Yuan, S.3    Pasa-Tolic, L.4    Lipton, M.S.5    Smith, R.D.6    Wysocki, V.H.7
  • 22
    • 34547162942 scopus 로고    scopus 로고
    • Relative specificities of water and ammonia losses from backbone fragments in collision-activated dissociation
    • Savitski, M. M.; Kjeldsen, F.; Nielsen, M. L.; Zubarev, R. A. Relative Specificities of Water and Ammonia Losses from Backbone Fragments in Collision-Activated Dissociation. J. Proteome Res. 2007, 6, 2669-2673.
    • (2007) J. Proteome Res. , vol.6 , pp. 2669-2673
    • Savitski, M.M.1    Kjeldsen, F.2    Nielsen, M.L.3    Zubarev, R.A.4
  • 23
    • 78651414181 scopus 로고
    • Mass spectrometric studies on amino acids and dipeptide derivatives
    • Andersson, C. O. Mass Spectrometric Studies on Amino Acids and Dipeptide Derivatives. Acta Chem. Scand. 1958, 12, 1353.
    • (1958) Acta Chem. Scand. , vol.12 , pp. 1353
    • Andersson, C.O.1
  • 24
    • 0142062498 scopus 로고    scopus 로고
    • Radicals with a controlled lifestyle
    • Stubbe, J. Radicals with a Controlled Lifestyle. Chem. Commun. 2003, 2511-2513.
    • (2003) Chem. Commun. , pp. 2511-2513
    • Stubbe, J.1
  • 25
    • 12844278044 scopus 로고    scopus 로고
    • The oxidative environment and protein damage
    • Davies, M. J. The Oxidative Environment and Protein Damage. Biochim. Biophys. Acta Prot. Proteom. 2005, 1703, 93-109.
    • (2005) Biochim. Biophys. Acta Prot. Proteom. , vol.1703 , pp. 93-109
    • Davies, M.J.1
  • 26
    • 70349917570 scopus 로고    scopus 로고
    • Ultraviolet photodissociation: Developments towards applications for mass-spectrometry-based proteomics
    • Ly, T.; Julian, R. R. Ultraviolet Photodissociation: Developments Towards Applications for Mass-Spectrometry-Based Proteomics. Angew. Chem. Int. Ed. 2009, 48, 7130-7137.
    • (2009) Angew. Chem. Int. Ed. , vol.48 , pp. 7130-7137
    • Ly, T.1    Julian, R.R.2
  • 27
    • 0000944563 scopus 로고    scopus 로고
    • Electron capture dissociation of multiply charged protein cations. A nonergodic process
    • Zubarev, R. A.; Kelleher, N. L.; McLafferty, F. W. Electron Capture Dissociation of Multiply Charged Protein Cations. A Nonergodic Process. J. Am. Chem. Soc. 1998, 120, 3265-3266.
    • (1998) J. Am. Chem. Soc. , vol.120 , pp. 3265-3266
    • Zubarev, R.A.1    Kelleher, N.L.2    McLafferty, F.W.3
  • 29
    • 0038610834 scopus 로고    scopus 로고
    • Reactions of polypeptide ions with electrons in the gas phase
    • Zubarev, R. A. Reactions of Polypeptide Ions with Electrons in the Gas Phase. Mass Spectrom. Rev. 2003, 22, 57-77.
    • (2003) Mass Spectrom. Rev. , vol.22 , pp. 57-77
    • Zubarev, R.A.1
  • 30
    • 14744299376 scopus 로고    scopus 로고
    • The role of electron capture dissociation in biomolecular analysis
    • Cooper, H. J., Håkansson, K.; Marshall, A. G. The Role of Electron Capture Dissociation in Biomolecular Analysis. Mass Spectrom. Rev. 2005, 24, 201-222.
    • (2005) Mass Spectrom. Rev. , vol.24 , pp. 201-222
    • Cooper, H.J.1    Håkansson, K.2    Marshall, A.G.3
  • 31
    • 13444274623 scopus 로고    scopus 로고
    • Toward a general mechanism of electron capture dissociation
    • Syrstad, E. A.; Tureček, F. Toward a General Mechanism of Electron Capture Dissociation. J. Am. Soc. Mass Spectrom. 2005, 16, 208-224.
    • (2005) J. Am. Soc. Mass Spectrom. , vol.16 , pp. 208-224
    • Syrstad, E.A.1    Tureček, F.2
  • 33
    • 0038634619 scopus 로고    scopus 로고
    • N-Ca bond dissociation energies and kinetics in amide and peptide radicals. Is the dissociation a non-ergodic process?
    • Tureček, F. N-Ca Bond Dissociation Energies and Kinetics in Amide and Peptide Radicals. Is the Dissociation a Non-ergodic Process? J. Am. Chem. Soc. 2003, 125, 5954-5963.
    • (2003) J. Am. Chem. Soc. , vol.125 , pp. 5954-5963
    • Tureček, F.1
  • 34
    • 0001412351 scopus 로고
    • On the photoionization of large molecules
    • Becker, C. H.; Wu, K. J. On the Photoionization of Large Molecules. J. Am. Soc. Mass Spectrom. 1995, 6, 883-888.
    • (1995) J. Am. Soc. Mass Spectrom. , vol.6 , pp. 883-888
    • Becker, C.H.1    Wu, K.J.2
  • 35
    • 0001311912 scopus 로고
    • Elementary processes in peptides: Electron mobility and dissociation in peptide cations in the gas phase
    • Weinkauf, R.; Schanen, P.; Yang, D.; Soukara, S.; Schlag, E. W. Elementary Processes in Peptides: Electron Mobility and Dissociation in Peptide Cations in the Gas Phase. J. Phys. Chem. 1995, 99, 11255-11265.
    • (1995) J. Phys. Chem. , vol.99 , pp. 11255-11265
    • Weinkauf, R.1    Schanen, P.2    Yang, D.3    Soukara, S.4    Schlag, E.W.5
  • 36
    • 84986942424 scopus 로고
    • Peptides investigated by laser desorption- multiphoton ionization mass spectrometry. Part VII
    • Grotemeyer, J.; Schlag, E. W. Peptides Investigated by Laser Desorption- Multiphoton Ionization Mass Spectrometry. Part VII. Org. Mass Spectrom. 1988, 23, 388-396.
    • (1988) Org. Mass Spectrom. , vol.23 , pp. 388-396
    • Grotemeyer, J.1    Schlag, E.W.2
  • 37
    • 0036770473 scopus 로고    scopus 로고
    • Time resolved photo dissociation of small peptide ions-combining laser desorption with ion trap/reflectron tof mass spectrometry
    • Cui, W.; Hu, Y.; Lifshitz, C. Time Resolved Photo Dissociation of Small Peptide Ions-Combining Laser Desorption with Ion Trap/Reflectron TOF Mass Spectrometry. Eur. Phys. J. D 2002, 20, 565-571.
    • (2002) Eur. Phys. J. D , vol.20 , pp. 565-571
    • Cui, W.1    Hu, Y.2    Lifshitz, C.3
  • 39
    • 9344256762 scopus 로고    scopus 로고
    • Designing copper(II) ternary complexes to generate radical cations of peptides in the gas phase: Role of the auxiliary ligand
    • Barlow, C. K.; Wee, S.; McFadyen, W. D.; O'Hair, R. A. J. Designing copper(II) Ternary Complexes to Generate Radical Cations of Peptides in the Gas Phase: Role of the Auxiliary Ligand. Dalton Trans. 2004, 3199-3204.
    • (2004) Dalton Trans. , pp. 3199-3204
    • Barlow, C.K.1    Wee, S.2    McFadyen, W.D.3    O'hair, R.A.J.4
  • 41
    • 17844369494 scopus 로고    scopus 로고
    • Formation of cationic peptide radicals by gas-phase redox reactions with trivalent chromium, manganese, iron, and cobalt complexes
    • Barlow, C. K.; McFadyen, W. D.; O'Hair, R. A. J. Formation of Cationic Peptide Radicals by Gas-Phase Redox Reactions with Trivalent Chromium, Manganese, Iron, and Cobalt Complexes. J. Am. Chem. Soc. 2005, 127, 6109-6115.
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 6109-6115
    • Barlow, C.K.1    McFadyen, W.D.2    O'hair, R.A.J.3
  • 42
    • 84889846186 scopus 로고    scopus 로고
    • Peptide radical cations
    • Laskin, J.; Lifshitz, C., Eds.; John Wiley and Sons, Inc.: Hoboken, NJ
    • Hopkinson, A. C.; Siu, K. W. M. Peptide Radical Cations. In Principles of Mass Spectrometry Applied to Biomolecules; Laskin, J.; Lifshitz, C., Eds.; John Wiley and Sons, Inc.: Hoboken, NJ, 2006; p. 301-335.
    • (2006) Principles of Mass Spectrometry Applied to Biomolecules , pp. 301-335
    • Hopkinson, A.C.1    Siu, K.W.M.2
  • 43
    • 69149104334 scopus 로고    scopus 로고
    • Radical cations of amino acids and peptides: Structures and stabilities
    • Hopkinson, A. C. Radical Cations of Amino Acids and Peptides: Structures and Stabilities. Mass Spectrom. Rev. 2009, 28, 655-671.
    • (2009) Mass Spectrom. Rev. , vol.28 , pp. 655-671
    • Hopkinson, A.C.1
  • 44
    • 34547479961 scopus 로고    scopus 로고
    • Copper-biomolecule complexes in the gas phase. The ternary way
    • Tureček, F. Copper-Biomolecule Complexes in the Gas Phase. The Ternary Way. Mass Spectrom. Rev. 2007, 26, 563-582.
    • (2007) Mass Spectrom. Rev. , vol.26 , pp. 563-582
    • Tureček, F.1
  • 45
    • 34250815177 scopus 로고    scopus 로고
    • Specific UV photodissociation of tyrosyl-containing peptides in multistage mass spectrometry
    • Joly, L.; Antoine, R.; Broyer, M.; Dugourd, P.; Lemoine, J. Specific UV Photodissociation of Tyrosyl-Containing Peptides in Multistage Mass Spectrometry. J. Mass Spectrom. 2007, 42, 818-824.
    • (2007) J. Mass Spectrom. , vol.42 , pp. 818-824
    • Joly, L.1    Antoine, R.2    Broyer, M.3    Dugourd, P.4    Lemoine, J.5
  • 46
    • 26844504129 scopus 로고    scopus 로고
    • Facile disulfide bond cleavage in gaseous peptide and protein cations by ultraviolet photodissociation at 157 nm
    • Fung, Y. M. E.; Kjeldsen, F.; Silivra, O. A.; Chan, T. W. D.; Zubarev, R. A. Facile Disulfide Bond Cleavage in Gaseous Peptide and Protein Cations by Ultraviolet Photodissociation at 157 nm. Angew. Chem. Int. Ed. 2005, 44, 6399-6403.
    • (2005) Angew. Chem. Int. Ed. , vol.44 , pp. 6399-6403
    • Fung, Y.M.E.1    Kjeldsen, F.2    Silivra, O.A.3    Chan, T.W.D.4    Zubarev, R.A.5
  • 47
    • 38349064873 scopus 로고    scopus 로고
    • Residue-specific radical-directed dissociation of whole proteins in the gas phase
    • Ly, T.; Julian, R. R. Residue-Specific Radical-Directed Dissociation of Whole Proteins in the Gas Phase. J. Am. Chem. Soc. 2008, 130, 351-358.
    • (2008) J. Am. Chem. Soc. , vol.130 , pp. 351-358
    • Ly, T.1    Julian, R.R.2
  • 48
    • 67349168438 scopus 로고    scopus 로고
    • Deciphering the peptide iodination code: Influence on subsequent gas-phase radical generation with photodissociation ESI-MS
    • Liu, Z.; Julian, R. R. Deciphering the Peptide Iodination Code: Influence on Subsequent Gas-Phase Radical Generation with Photodissociation ESI-MS. J. Am. Soc. Mass Spectrom. 2009, 20, 965-971.
    • (2009) J. Am. Soc. Mass Spectrom. , vol.20 , pp. 965-971
    • Liu, Z.1    Julian, R.R.2
  • 49
    • 61849108191 scopus 로고    scopus 로고
    • Side chain chemistry mediates backbone fragmentation in hydrogen deficient peptide radicals
    • Sun, Q.; Nelson, H.; Ly, T.; Stoltz, B. M.; Julian, R. R. Side Chain Chemistry Mediates Backbone Fragmentation in Hydrogen Deficient Peptide Radicals. J. Proteome Res. 2009, 8, 958-966.
    • (2009) J. Proteome Res. , vol.8 , pp. 958-966
    • Sun, Q.1    Nelson, H.2    Ly, T.3    Stoltz, B.M.4    Julian, R.R.5
  • 50
    • 35648960291 scopus 로고    scopus 로고
    • Comparison of collision-induced dissociation and electron-induced dissociation of singly protonated aromatic amino acids, cystine, and related simple peptides using a hybrid linear ion trap-FT-ICR mass spectrometer
    • Lioe, H.; O'Hair, R. A. J. Comparison of Collision-Induced Dissociation and Electron-Induced Dissociation of Singly Protonated Aromatic Amino Acids, Cystine, and Related Simple Peptides Using a Hybrid Linear Ion Trap-FT-ICR Mass Spectrometer. Anal. Bioanal. Chem. 2007, 389, 1429-1437.
    • (2007) Anal. Bioanal. Chem. , vol.389 , pp. 1429-1437
    • Lioe, H.1    O'hair, R.A.J.2
  • 51
    • 67650376034 scopus 로고    scopus 로고
    • Electron-induced dissociation of protonated peptides yields backbone fragmentation consistent with a hydrogen-deficient radical
    • Ly, T.; Yin, S.; Loo, J. A.; Julian, R. R. Electron-Induced Dissociation of Protonated Peptides Yields Backbone Fragmentation Consistent with a Hydrogen-Deficient Radical. Rapid Commun. Mass Spectrom. 2009, 23, 2099-2101.
    • (2009) Rapid Commun. Mass Spectrom. , vol.23 , pp. 2099-2101
    • Ly, T.1    Yin, S.2    Loo, J.A.3    Julian, R.R.4
  • 52
    • 24744432499 scopus 로고    scopus 로고
    • Bioconjugates for tunable peptide fragmentation: Free radical initiated peptide sequencing (FRIPS)
    • Hodyss, R.; Cox, H. A.; Beauchamp, J. L. Bioconjugates for Tunable Peptide Fragmentation: Free Radical Initiated Peptide Sequencing (FRIPS). J. Am. Chem. Soc. 2005, 127, 12436-12437.
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 12436-12437
    • Hodyss, R.1    Cox, H.A.2    Beauchamp, J.L.3
  • 54
    • 33747094043 scopus 로고    scopus 로고
    • N-terminal amino acid side-chain cleavage of chemically modified peptides in the gas phase: A mass spectrometry technique for nterminus identification
    • Chacon, A.; Masterson, D. S.; Yin, H.; Liebler, D. C.; Porter, N. A. N-Terminal Amino Acid Side-Chain Cleavage of Chemically Modified Peptides in the Gas Phase: A Mass Spectrometry Technique for NTerminus Identification. Bioorg. Med. Chem. 2006, 14, 6213-6222.
    • (2006) Bioorg. Med. Chem. , vol.14 , pp. 6213-6222
    • Chacon, A.1    Masterson, D.S.2    Yin, H.3    Liebler, D.C.4    Porter, N.A.5
  • 56
    • 33751323198 scopus 로고    scopus 로고
    • Electrospray Tandem mass spectrometry analysis of S- and N-nitrosopeptides: Facile loss of NO and radical-induced fragmentation
    • Hao, G.; Gross, S. S. Electrospray Tandem Mass Spectrometry Analysis of S- and N-Nitrosopeptides: Facile Loss of NO and Radical-Induced Fragmentation. J. Am. Soc. Mass Spectrom. 2006, 17, 1725-1730.
    • (2006) J. Am. Soc. Mass Spectrom. , vol.17 , pp. 1725-1730
    • Hao, G.1    Gross, S.S.2
  • 57
    • 0036261874 scopus 로고    scopus 로고
    • Structure, energetics, and reactivity of ternary complexes of amino acids with Cu(II) and 2,2=-bipyridine by density functional theory. A combination of radical-induced and spin-remote fragmentations
    • 1 plate
    • Seymour, J. L.; Tureček, F. Structure, Energetics, and Reactivity of Ternary Complexes of Amino Acids with Cu(II) and 2,2=-bipyridine by density functional theory. A Combination of Radical-Induced and Spin-Remote Fragmentations. J. Mass Spectrom. 2002, 37, 533-540, 1 plate.
    • (2002) J. Mass Spectrom. , vol.37 , pp. 533-540
    • Seymour, J.L.1    Tureček, F.2
  • 58
    • 34548599820 scopus 로고    scopus 로고
    • Charge-remote fragmentation of odd-electron peptide ions
    • Laskin, J.; Yang, Z.; Lam, C.; Chu, I. K. Charge-Remote Fragmentation of Odd-Electron Peptide Ions. Anal. Chem. 2007, 79, 6607-6614.
    • (2007) Anal. Chem. , vol.79 , pp. 6607-6614
    • Laskin, J.1    Yang, Z.2    Lam, C.3    Chu, I.K.4
  • 59
    • 0036010958 scopus 로고    scopus 로고
    • Side-chain radical losses from radical cations allows distinction of leucine and isoleucine residues in the isomeric peptides gly-XXX-Arg
    • Wee, S.; O'Hair, R. A. J.; McFadyen, W. D. Side-Chain Radical Losses from Radical Cations Allows Distinction of Leucine and Isoleucine Residues in the Isomeric Peptides Gly-XXX-Arg. Rapid Commun. Mass Spectrom. 2002, 16, 884-890.
    • (2002) Rapid Commun. Mass Spectrom. , vol.16 , pp. 884-890
    • Wee, S.1    O'hair, R.A.J.2    McFadyen, W.D.3
  • 60
    • 2442517354 scopus 로고    scopus 로고
    • Comparing the gas-phase fragmentation reactions of protonated and radical cations of the tripeptides GXR*
    • Wee, S.; O'Hair, R. A. J.; McFadyen, W. D. Comparing the Gas-Phase Fragmentation Reactions of Protonated and Radical Cations of the Tripeptides GXR*. Int. J. Mass Spectrom. 2004, 234, 101-122.
    • (2004) Int. J. Mass Spectrom. , vol.234 , pp. 101-122
    • Wee, S.1    O'hair, R.A.J.2    McFadyen, W.D.3
  • 61
    • 0033551437 scopus 로고    scopus 로고
    • Effects of structure on αc-H bond enthalpies of amino acid residues: Relevance to H transfers in enzyme mechanisms and in protein oxidation
    • Rauk, A.; Yu, D.; Taylor, J.; Shustov, G. V.; Block, D. A.; Armstrong, D. A. Effects of Structure on αC-H Bond Enthalpies of Amino Acid Residues: Relevance to H Transfers in Enzyme Mechanisms and in Protein Oxidation. Biochemistry 1999, 38, 9089-9096.
    • (1999) Biochemistry , vol.38 , pp. 9089-9096
    • Rauk, A.1    Yu, D.2    Taylor, J.3    Shustov, G.V.4    Block, D.A.5    Armstrong, D.A.6
  • 64
    • 45749143632 scopus 로고    scopus 로고
    • Are the radical centers in peptide radical cations mobile? the generation, tautomerism, and dissociation of isomeric α-carbon- centered triglycine radical cations in the gas phase
    • Chu, I. K.; Zhao, J.; Xu, M.; Siu, S. O.; Hopkinson, A. C.; Siu, K. W. M. Are the Radical Centers in Peptide Radical Cations Mobile? The Generation, Tautomerism, and Dissociation of Isomeric α-Carbon- Centered Triglycine Radical Cations in the Gas Phase. J. Am. Chem. Soc. 2008, 130, 7862-7872.
    • (2008) J. Am. Chem. Soc. , vol.130 , pp. 7862-7872
    • Chu, I.K.1    Zhao, J.2    Xu, M.3    Siu, S.O.4    Hopkinson, A.C.5    Siu, K.W.M.6
  • 66
    • 0031042252 scopus 로고    scopus 로고
    • Toward site specificity of oxidative damage in proteins: C-H and C-C bond dissociation energies and reduction potentials of the radicals of alanine, serine, and threonine residues-an ab initio study
    • Rauk, A.; Yu, D.; Armstrong, D. A. Toward Site Specificity of Oxidative Damage in Proteins: C-H and C-C Bond Dissociation Energies and Reduction Potentials of the Radicals of Alanine, Serine, and Threonine Residues-An Ab Initio Study. J. Am. Chem. Soc. 1997, 119, 208-217.
    • (1997) J. Am. Chem. Soc. , vol.119 , pp. 208-217
    • Rauk, A.1    Yu, D.2    Armstrong, D.A.3
  • 67
    • 47049096866 scopus 로고    scopus 로고
    • Mechanisms of protein damage induced by cysteine thiyl radical formation
    • Schoeneich, C. Mechanisms of Protein Damage Induced by Cysteine Thiyl Radical Formation. Chem. Res. Toxicol. 2008, 21, 1175-1179.
    • (2008) Chem. Res. Toxicol. , vol.21 , pp. 1175-1179
    • Schoeneich, C.1
  • 68
    • 0037467060 scopus 로고    scopus 로고
    • Thiyl radicals abstract hydrogen atoms from the (α)c-h bonds in model peptides: Absolute rate constants and effect of amino acid structure
    • Nauser, T.; Schoeneich, C. Thiyl Radicals Abstract Hydrogen Atoms from the (α)C-H Bonds in Model Peptides: Absolute Rate Constants and Effect of Amino Acid Structure. J. Am. Chem. Soc. 2003, 125, 2042-2043.
    • (2003) J. Am. Chem. Soc. , vol.125 , pp. 2042-2043
    • Nauser, T.1    Schoeneich, C.2
  • 69
    • 6344249017 scopus 로고    scopus 로고
    • Thiyl radical reaction with amino acid side chains: Rate constants for hydrogen transfer and relevance for post-translational protein modification
    • Nauser, T.; Pelling, J.; Schoeneich, C. Thiyl Radical Reaction with Amino Acid Side Chains: Rate Constants for Hydrogen Transfer and Relevance for Post-Translational Protein Modification. Chem. Res. Toxicol. 2004, 17, 1323-1328.
    • (2004) Chem. Res. Toxicol. , vol.17 , pp. 1323-1328
    • Nauser, T.1    Pelling, J.2    Schoeneich, C.3
  • 70
    • 49449089311 scopus 로고    scopus 로고
    • Peptide cysteine thiyl radicals abstract hydrogen atoms from surrounding amino acids: The photolysis of a cystine containing model peptide
    • Mozziconacci, O.; Sharov, V.; Williams, T. D.; Kerwin, B. A.; Schoeneich, C. Peptide Cysteine Thiyl Radicals Abstract Hydrogen Atoms from Surrounding Amino Acids: The Photolysis of a Cystine Containing Model Peptide. J. Phys. Chem. B 2008, 112, 9250-9257.
    • (2008) J. Phys. Chem. B , vol.112 , pp. 9250-9257
    • Mozziconacci, O.1    Sharov, V.2    Williams, T.D.3    Kerwin, B.A.4    Schoeneich, C.5
  • 71
    • 58149151045 scopus 로고    scopus 로고
    • Reversible intramolecular hydrogen transfer between protein cysteine thiyl radicals and αc-H bonds in insulin: Control of selectivity by secondary structure
    • Mozziconacci, O.; Williams, T. D.; Kerwin, B. A.; Schoeneich, C. Reversible Intramolecular Hydrogen Transfer Between Protein Cysteine Thiyl Radicals and αC-H Bonds in Insulin: Control of Selectivity by Secondary Structure. J. Phys. Chem. B 2008, 112, 15921-15932.
    • (2008) J. Phys. Chem. B , vol.112 , pp. 15921-15932
    • Mozziconacci, O.1    Williams, T.D.2    Kerwin, B.A.3    Schoeneich, C.4
  • 72
    • 57449084574 scopus 로고    scopus 로고
    • Reversible intramolecular hydrogen transfer between cysteine thiyl radicals and glycine and alanine in model peptides: Absolute rate constants derived from pulse radiolysis and laser flash photolysis
    • Nauser, T.; Casi, G.; Koppenol, W. H.; Schoeneich, C. Reversible Intramolecular Hydrogen Transfer Between Cysteine Thiyl Radicals and Glycine and Alanine in Model Peptides: Absolute Rate Constants Derived from Pulse Radiolysis and Laser Flash Photolysis. J. Phys. Chem. B 2008, 112, 15034-15044.
    • (2008) J. Phys. Chem. B , vol.112 , pp. 15034-15044
    • Nauser, T.1    Casi, G.2    Koppenol, W.H.3    Schoeneich, C.4
  • 73
    • 0032232662 scopus 로고    scopus 로고
    • A mass spectrometric and ab initio study of the pathways for dehydration of simple glycine and cysteine-containing peptide [M + H]+
    • Reid, G. E.; Simpson, R. J.; O'Hair, R. A. J. A Mass Spectrometric and Ab Initio Study of the Pathways for Dehydration of Simple Glycine and Cysteine-Containing Peptide [M + H]+ Ions. J. Am. Soc. Mass Spectrom. 1998, 9, 945-956.
    • (1998) Ions. J. Am. Soc. Mass Spectrom. , vol.9 , pp. 945-956
    • Reid, G.E.1    Simpson, R.J.2    O'hair, R.A.J.3
  • 74
    • 0032232401 scopus 로고    scopus 로고
    • Role of the sulfhydryl group on the gas phase fragmentation reactions of protonated cysteine and cysteine containing peptides
    • O'Hair, R. A. J.; Styles, M. L.; Reid, G. E. Role of the Sulfhydryl Group on the Gas Phase Fragmentation Reactions of Protonated Cysteine and Cysteine Containing Peptides. J. Am. Soc. Mass Spectrom. 1998, 9, 1275-1284.
    • (1998) J. Am. Soc. Mass Spectrom. , vol.9 , pp. 1275-1284
    • O'hair, R.A.J.1    Styles, M.L.2    Reid, G.E.3
  • 75
    • 37049072595 scopus 로고
    • Complex formation between oxalate and (2,2=:6=,2 -terpyridyl)copper(II) in dimethyl sulfoxide solution. Synthesis and crystal structures of mono- and dinuclear complexes
    • Castro, I.; Faus, J.; Julve, M.; Gleizes, A. Complex Formation Between Oxalate and (2,2=:6=,2 -Terpyridyl)Copper(II) in Dimethyl Sulfoxide Solution. Synthesis and Crystal Structures of Mono- and Dinuclear Complexes. Dalton Trans. 1991, 1937-1344.
    • (1991) Dalton Trans. , pp. 1937-1344
    • Castro, I.1    Faus, J.2    Julve, M.3    Gleizes, A.4
  • 76
    • 0001106559 scopus 로고
    • The use of N-formylamino acids in peptide synthesis
    • Sheehan, J. C.; Yang, D.-D. H. The Use of N-Formylamino Acids in Peptide Synthesis. J. Am. Chem. Soc. 1958, 80, 1154-1158.
    • (1958) J. Am. Chem. Soc. , vol.80 , pp. 1154-1158
    • Sheehan, J.C.1    Yang, D.-D.H.2
  • 78
    • 0000189651 scopus 로고
    • Density-functional thermochemistry. III. The role of exact exchange
    • Becke, A. D. Density-Functional Thermochemistry. III. The Role of Exact Exchange. J. Chem. Phys. 1993, 98, 5648-5652.
    • (1993) J. Chem. Phys. , vol.98 , pp. 5648-5652
    • Becke, A.D.1
  • 79
    • 0345491105 scopus 로고
    • Development of the colle-salvetti correlation-energy formula into a functional of the electron density
    • Lee, C.; Yang, W.; Parr, R. G. Development of the Colle-Salvetti Correlation-Energy Formula into a Functional of the Electron Density. Phys. Rev. B. 1988, 37, 785-789.
    • (1988) Phys. Rev. B. , vol.37 , pp. 785-789
    • Lee, C.1    Yang, W.2    Parr, R.G.3
  • 80
    • 65549138010 scopus 로고    scopus 로고
    • Gas-phase fragmentation of long-lived cysteine radical cations formed via NO loss from protonated s-nitrosocysteine
    • Ryzhov, V.; Lam, A. K. Y.; O'Hair, R. A. J. Gas-Phase Fragmentation of Long-Lived Cysteine Radical Cations Formed Via NO Loss from Protonated S-Nitrosocysteine. J. Am. Soc. Mass Spectrom. 2009, 20, 985-995.
    • (2009) J. Am. Soc. Mass Spectrom. , vol.20 , pp. 985-995
    • Ryzhov, V.1    Lam, A.K.Y.2    O'hair, R.A.J.3
  • 81
    • 0028863703 scopus 로고
    • Radicals and ions of glycine: An ab initio study of the structures and gas-phase thermochemistry
    • Yu, D.; Rauk, A.; Armstrong, D. A. Radicals and Ions of Glycine: An Ab Initio Study of the Structures and Gas-Phase Thermochemistry. J. Am. Chem. Soc. 1995, 117, 1789-1796.
    • (1995) J. Am. Chem. Soc. , vol.117 , pp. 1789-1796
    • Yu, D.1    Rauk, A.2    Armstrong, D.A.3


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