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Volumn 25, Issue 4, 2010, Pages 295-301

The distribution of a phage-related insertion sequence element in the cyanobacterium, Microcystis aeruginosa

Author keywords

Cyanobacteria; Cyanophage; Horizontal gene transfer; Insertion sequence; Microcystis

Indexed keywords

ARTICLE; BACTERIOPHAGE; CLASSIFICATION; GENE EXPRESSION REGULATION; GENETICS; MICROCYSTIS; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGY; TRANSPOSON; VIROLOGY;

EID: 78650053484     PISSN: 13426311     EISSN: 13426311     Source Type: Journal    
DOI: 10.1264/jsme2.ME10125     Document Type: Article
Times cited : (13)

References (45)
  • 2
    • 70449709427 scopus 로고    scopus 로고
    • Insertion sequence content reflects genome plasticity in strains of the root nodule actinobacterium Frankia
    • Bickhart, D.M., J.P. Gogarten, P. Lapierre, L.S. Tisa, P. Normand, and D.R. Benson. 2009. Insertion sequence content reflects genome plasticity in strains of the root nodule actinobacterium Frankia. BMC Genomics 10:468.
    • (2009) BMC Genomics , vol.10 , pp. 468
    • Bickhart, D.M.1    Gogarten, J.P.2    Lapierre, P.3    Tisa, L.S.4    Normand, P.5    Benson, D.R.6
  • 3
    • 0030608397 scopus 로고    scopus 로고
    • Characterization of a mosaic ISS1 element and evidence for the recent horizontal transfer of two different types of ISS1 between Streptococcus thermophilus and Lactococcus lactis
    • Bourgoin, F., G. Guédon, M. Pébay, Y. Roussel, C. Panis, and B. Decaris. 1996. Characterization of a mosaic ISS1 element and evidence for the recent horizontal transfer of two different types of ISS1 between Streptococcus thermophilus and Lactococcus lactis. Gene 178:15-23.
    • (1996) Gene , vol.178 , pp. 15-23
    • Bourgoin, F.1    Guédon, G.2    Pébay, M.3    Roussel, Y.4    Panis, C.5    Decaris, B.6
  • 5
    • 0030878556 scopus 로고    scopus 로고
    • Three insertion sequences from the cyanobacterium Synechocystis PCC6803 support the occurrence of horizontal DNA transfer among bacteria
    • Cassier-Chauvat, C., M. Poncelet, and F. Chauvat. 1997. Three insertion sequences from the cyanobacterium Synechocystis PCC6803 support the occurrence of horizontal DNA transfer among bacteria. Gene 195:257-266.
    • (1997) Gene , vol.195 , pp. 257-266
    • Cassier-Chauvat, C.1    Poncelet, M.2    Chauvat, F.3
  • 6
    • 25144476144 scopus 로고    scopus 로고
    • In J. Huisman, H.C.P. Matthijs, and P.M. Visser, (ed.), Harmful Cyanobacteria. Springer, Dordrecht
    • Codd, G.A., J. Lindsay, F.M. Young, L.F. Morrison, and J.S. Metcalf. 2005. Harmful cyanobacteria, p. 1-23. In J. Huisman, H.C.P. Matthijs, and P.M. Visser, (ed.), Harmful Cyanobacteria. Springer, Dordrecht.
    • (2005) Harmful Cyanobacteria , pp. 1-23
    • Codd, G.A.1    Lindsay, J.2    Young, F.M.3    Morrison, L.F.4    Metcalf, J.S.5
  • 8
    • 0038054297 scopus 로고    scopus 로고
    • The role played by viruses in the evolution of their hosts: A view based on informational protein phylogenies
    • Filée, J., P. Forterre, and J. Laurent. 2003. The role played by viruses in the evolution of their hosts: a view based on informational protein phylogenies. Res. Microbiol. 154:237-243.
    • (2003) Res. Microbiol , vol.154 , pp. 237-243
    • Filée, J.1    Forterre, P.2    Laurent, J.3
  • 9
    • 0032810166 scopus 로고    scopus 로고
    • Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins
    • Forterre, P. 1999. Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins. Mol. Microbiol. 33:457-465.
    • (1999) Mol. Microbiol , vol.33 , pp. 457-465
    • Forterre, P.1
  • 10
    • 46649118468 scopus 로고    scopus 로고
    • Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium
    • Frangeul, L., P. Quillardet, A.M. Castets, et al. 2008. Highly plastic genome of Microcystis aeruginosa PCC 7806, a ubiquitous toxic freshwater cyanobacterium. BMC genomics 9:274.
    • (2008) BMC Genomics , vol.9 , pp. 274
    • Frangeul, L.1    Quillardet, P.2    Castets, A.M.3
  • 11
    • 0033542481 scopus 로고    scopus 로고
    • Marine viruses and their biogeochemical and ecological effects
    • Fuhrman, J.A. 1999. Marine viruses and their biogeochemical and ecological effects. Nature 399:541-548.
    • (1999) Nature , vol.399 , pp. 541-548
    • Fuhrman, J.A.1
  • 12
    • 0023855310 scopus 로고
    • Why do unrelated insertion sequences occur together in the genome of Escherichia coli?
    • Hartl, D.L., and S.A. Sawyer. 1988. Why do unrelated insertion sequences occur together in the genome of Escherichia coli? Genetics 118:537-541.
    • (1988) Genetics , vol.118 , pp. 537-541
    • Hartl, D.L.1    Sawyer, S.A.2
  • 14
    • 60349101170 scopus 로고    scopus 로고
    • Analysis of the mitochondrial genome, transcripts, and electron transport activity in the dinoflagellate Alexandrium catenella (Gonyaulacales, Dinophyceae)
    • Kamikawa, R., H. Nishimura, and Y. Sako. 2009. Analysis of the mitochondrial genome, transcripts, and electron transport activity in the dinoflagellate Alexandrium catenella (Gonyaulacales, Dinophyceae). Phycol. Res. 57:1-11.
    • (2009) Phycol. Res , vol.57 , pp. 1-11
    • Kamikawa, R.1    Nishimura, H.2    Sako, Y.3
  • 15
    • 40949129063 scopus 로고    scopus 로고
    • Complete genomic structure of the bloom-forming toxic cyanobacterium Microcystis aeruginosa NIES-843
    • Kaneko, T., N. Nakajima, S. Okamoto, et al. 2007. Complete genomic structure of the bloom-forming toxic cyanobacterium Microcystis aeruginosa NIES-843. DNA Res. 14:247-256.
    • (2007) DNA Res , vol.14 , pp. 247-256
    • Kaneko, T.1    Nakajima, N.2    Okamoto, S.3
  • 17
    • 0028029010 scopus 로고
    • Insertion sequence IS6100 on plasmid pOAD2, which degrades nylon oligomers
    • Kato, K., K. Ohtsuki, H. Mitsuda, T. Yomo, S. Negoro, and I. Urabe. 1994. Insertion sequence IS6100 on plasmid pOAD2, which degrades nylon oligomers. J. Bacteriol. 176:1197-1200.
    • (1994) J. Bacteriol , vol.176 , pp. 1197-1200
    • Kato, K.1    Ohtsuki, K.2    Mitsuda, H.3    Yomo, T.4    Negoro, S.5    Urabe, I.6
  • 18
    • 0033806018 scopus 로고    scopus 로고
    • Functional organization and insertion specificity of IS607, a chimeric element of Helicobacter pylori
    • Kersulyte, D., A.K. Mukhopadhyay, M. Shirai, T. Nakazawa, and D.E. Berg. 2000. Functional organization and insertion specificity of IS607, a chimeric element of Helicobacter pylori. J. Bacteriol. 182:5300-5308.
    • (2000) J. Bacteriol , vol.182 , pp. 5300-5308
    • Kersulyte, D.1    Mukhopadhyay, A.K.2    Shirai, M.3    Nakazawa, T.4    Berg, D.E.5
  • 19
    • 0000166036 scopus 로고    scopus 로고
    • Detection and 16S rDNA sequence analysis of a bloom-forming cyanobacterial genus Microcystis
    • Kondo, R., M. Komura, S. Hiroishi, and Y. Hata. 1998. Detection and 16S rDNA sequence analysis of a bloom-forming cyanobacterial genus Microcystis. Fish. Sci. 64:840-841.
    • (1998) Fish. Sci , vol.64 , pp. 840-841
    • Kondo, R.1    Komura, M.2    Hiroishi, S.3    Hata, Y.4
  • 20
    • 0026735995 scopus 로고
    • The evolution of insertion sequences within enteric bacteria
    • Lawrence, J.G., H. Ochman, and D.L. Hartl. 1992. The evolution of insertion sequences within enteric bacteria. Genetics 131:9-20.
    • (1992) Genetics , vol.131 , pp. 9-20
    • Lawrence, J.G.1    Ochman, H.2    Hartl, D.L.3
  • 23
    • 34548513271 scopus 로고    scopus 로고
    • Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution
    • Lindell, D., J.D. Jaffe, M.L. Coleman, et al. 2007. Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution. Nature 449:83-86.
    • (2007) Nature , vol.449 , pp. 83-86
    • Lindell, D.1    Jaffe, J.D.2    Coleman, M.L.3
  • 24
    • 0029360727 scopus 로고
    • Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR
    • Liu, Y.G., N. Mitsukawa, T. Oosumi, and R.F. Whittier. 1995. Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J. 8:457-463.
    • (1995) Plant J , vol.8 , pp. 457-463
    • Liu, Y.G.1    Mitsukawa, N.2    Oosumi, T.3    Whittier, R.F.4
  • 25
    • 0028949381 scopus 로고
    • Thermal asymmetric interlaced PCR: Automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking
    • Liu, Y.G., and R.F. Whittier. 1995. Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking. Genomics 25:674-681.
    • (1995) Genomics , vol.25 , pp. 674-681
    • Liu, Y.G.1    Whittier, R.F.2
  • 27
    • 0041736065 scopus 로고    scopus 로고
    • Marine ecosystems: Bacterial photosynthesis genes in a virus
    • Mann, N.H., A. Cook, A. Millard, S. Bailey, and M. Clokie. 2003. Marine ecosystems: bacterial photosynthesis genes in a virus. Nature 424:741.
    • (2003) Nature , vol.424 , pp. 741
    • Mann, N.H.1    Cook, A.2    Millard, A.3    Bailey, S.4    Clokie, M.5
  • 28
    • 38349118808 scopus 로고    scopus 로고
    • Horizontal gene transfer and nucleotide compositional anomaly in large DNA viruses
    • Monier, A., J.-M. Claverie, and H. Ogata. 2007. Horizontal gene transfer and nucleotide compositional anomaly in large DNA viruses. BMC Genomics 8:456.
    • (2007) BMC Genomics , vol.8 , pp. 456
    • Monier, A.1    Claverie, J.-M.2    Ogata, H.3
  • 29
    • 0017647444 scopus 로고
    • Transposable genetic elements as agents of gene instability and chromosomal rearrangements
    • Nevers, P., and H. Saedler. 1977. Transposable genetic elements as agents of gene instability and chromosomal rearrangements. Nature 268:109-115.
    • (1977) Nature , vol.268 , pp. 109-115
    • Nevers, P.1    Saedler, H.2
  • 30
    • 0025198355 scopus 로고
    • Viral mortality of marine bacteria and cyanobacteria
    • Proctor, L.M., and J.A. Fuhrman. 1990. Viral mortality of marine bacteria and cyanobacteria. Nature 343:60-62.
    • (1990) Nature , vol.343 , pp. 60-62
    • Proctor, L.M.1    Fuhrman, J.A.2
  • 31
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist, F., and J.P. Huelsenbeck. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 32
    • 28444476607 scopus 로고    scopus 로고
    • The genome sequence of Clostridium botulinum type C neurotoxin-converting phage and the molecular mechanisms of unstable lysogeny
    • Sakaguchi, Y., T. Hayashi, K. Kurokawa, et al. 2005. The genome sequence of Clostridium botulinum type C neurotoxin-converting phage and the molecular mechanisms of unstable lysogeny. Proc. Natl. Acad. Sci. USA 102:17472-17477.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 17472-17477
    • Sakaguchi, Y.1    Hayashi, T.2    Kurokawa, K.3
  • 34
    • 70249108768 scopus 로고    scopus 로고
    • Photosystem I gene cassettes are present in marine virus genomes
    • Sharon, I., A. Alperovitch, F. Rohwer, et al. 2009. Photosystem I gene cassettes are present in marine virus genomes. Nature 461:258-262.
    • (2009) Nature , vol.461 , pp. 258-262
    • Sharon, I.1    Alperovitch, A.2    Rohwer, F.3
  • 35
    • 0036229438 scopus 로고    scopus 로고
    • Diversity in the serine recombinases
    • Smith, M.C.M., and H.M. Thorpe. 2002. Diversity in the serine recombinases. Mol. Microbiol. 44:299-307.
    • (2002) Mol. Microbiol , vol.44 , pp. 299-307
    • Smith, M.C.M.1    Thorpe, H.M.2
  • 36
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis, A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 37
    • 34548792911 scopus 로고    scopus 로고
    • Marine viruses-major players in the global ecosystem
    • Suttle, C.A. 2007. Marine viruses-major players in the global ecosystem. Nat. Rev. Microbiol. 5:801-812.
    • (2007) Nat. Rev. Microbiol , vol.5 , pp. 801-812
    • Suttle, C.A.1
  • 38
    • 85000482965 scopus 로고    scopus 로고
    • Development and application of quantitative detection of cyanophages phylogenetically related to cyanophage Ma-LMM01 infecting Microcystis aeruginosa in fresh water
    • Takashima, Y., T. Yoshida, M. Yoshida, Y. Shirai, Y. Tomaru, Y. Takao, S. Hiroishi, and K. Nagasaki. 2007. Development and application of quantitative detection of cyanophages phylogenetically related to cyanophage Ma-LMM01 infecting Microcystis aeruginosa in fresh water. Microbes Environ. 22:207-213.
    • (2007) Microbes Environ , vol.22 , pp. 207-213
    • Takashima, Y.1    Yoshida, T.2    Yoshida, M.3    Shirai, Y.4    Tomaru, Y.5    Takao, Y.6    Hiroishi, S.7    Nagasaki, K.8
  • 39
    • 36448942567 scopus 로고    scopus 로고
    • Multilocus sequence typing (MLST) reveals high genetic diversity and clonal population structure of the toxic cyanobacterium Microcystis aeruginosa
    • Tanabe, Y., F. Kasai, and M.M. Watanabe. 2007. Multilocus sequence typing (MLST) reveals high genetic diversity and clonal population structure of the toxic cyanobacterium Microcystis aeruginosa. Microbiology 153:3695-3703.
    • (2007) Microbiology , vol.153 , pp. 3695-3703
    • Tanabe, Y.1    Kasai, F.2    Watanabe, M.M.3
  • 40
    • 70349915871 scopus 로고    scopus 로고
    • Quantification of Microcystis in a eutrophic lake by simple DNA extraction and SYBR Green real-time PCR
    • Tomioka, N., T. Nagai, T. Kawasaki, A. Imai, K. Matsushige, and K. Kohata. 2008. Quantification of Microcystis in a eutrophic lake by simple DNA extraction and SYBR Green real-time PCR. Microbes Environ. 23:306-312.
    • (2008) Microbes Environ , vol.23 , pp. 306-312
    • Tomioka, N.1    Nagai, T.2    Kawasaki, T.3    Imai, A.4    Matsushige, K.5    Kohata, K.6
  • 41
    • 20444500932 scopus 로고    scopus 로고
    • Genetic diversity of the toxic cyanobacterium Microcystis in Lake Mikata
    • Yoshida, M., T. Yoshida, Y. Takashima, R. Kondo, and S. Hiroishi. 2005. Genetic diversity of the toxic cyanobacterium Microcystis in Lake Mikata. Environ. Toxicol. 20:229-234.
    • (2005) Environ. Toxicol , vol.20 , pp. 229-234
    • Yoshida, M.1    Yoshida, T.2    Takashima, Y.3    Kondo, R.4    Hiroishi, S.5
  • 42
    • 47249165613 scopus 로고    scopus 로고
    • Intra-specific phenotypic and genotypic variation in toxic cyanobacterial Microcystis strains
    • Yoshida, M., T. Yoshida, M. Satomi, Y. Takashima, N. Hosoda, and S. Hiroishi. 2008. Intra-specific phenotypic and genotypic variation in toxic cyanobacterial Microcystis strains. J. Appl. Microbiol. 105:407-415.
    • (2008) J. Appl. Microbiol , vol.105 , pp. 407-415
    • Yoshida, M.1    Yoshida, T.2    Satomi, M.3    Takashima, Y.4    Hosoda, N.5    Hiroishi, S.6
  • 43
    • 77957141407 scopus 로고    scopus 로고
    • Real-time PCR detection of host-mediated cyanophage gene transcripts during infection of a natural Microcystis aeruginosa population
    • Yoshida, M., T. Yoshida, Y. Yoshida-Takashima, A. Kashima, and S. Hiroishi. 2010. Real-time PCR detection of host-mediated cyanophage gene transcripts during infection of a natural Microcystis aeruginosa population. Microbes Environ. 25:211-215.
    • (2010) Microbes Environ , vol.25 , pp. 211-215
    • Yoshida, M.1    Yoshida, T.2    Yoshida-Takashima, Y.3    Kashima, A.4    Hiroishi, S.5


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