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Volumn 154, Issue 4, 2003, Pages 237-243

The role played by viruses in the evolution of their hosts: A view based on informational protein phylogenies

Author keywords

Horizontal gene transfer; Mitochondria; Nonorthologous gene displacement; Phage; Phylogeny; Plasmid; Virus

Indexed keywords

DNA; DNA DIRECTED DNA POLYMERASE DELTA; ENZYME; HELICASE; PROTEIN; RIBONUCLEOTIDE REDUCTASE; THYMIDYLATE SYNTHASE;

EID: 0038054297     PISSN: 09232508     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0923-2508(03)00066-4     Document Type: Article
Times cited : (88)

References (24)
  • 1
    • 0002367729 scopus 로고    scopus 로고
    • MOLPHY version 2.3: Programs for molecular phylogenetics based on maximum likelihood
    • Adachi J., Hasegawa M. MOLPHY version 2.3: Programs for molecular phylogenetics based on maximum likelihood. Comput. Sci. Monogr. 28:1996;1-150.
    • (1996) Comput. Sci. Monogr. , vol.28 , pp. 1-150
    • Adachi, J.1    Hasegawa, M.2
  • 3
    • 0032837333 scopus 로고    scopus 로고
    • Evolution and horizontal transfer of dUTPase-encoding genes in viruses and their hosts
    • Baldo A.M., McClure M.A. Evolution and horizontal transfer of dUTPase-encoding genes in viruses and their hosts. J. Virol. 73:1999;7710-7721.
    • (1999) J. Virol. , vol.73 , pp. 7710-7721
    • Baldo, A.M.1    McClure, M.A.2
  • 4
    • 0036107982 scopus 로고    scopus 로고
    • Evolution of DNA polymerase families: Evidences for multiple gene exchange between cellular and viral proteins
    • Filée J., Forterre P., Sen-Lin T., Laurent J. Evolution of DNA polymerase families: Evidences for multiple gene exchange between cellular and viral proteins. J. Mol. Evol. 54:2002;763-773.
    • (2002) J. Mol. Evol. , vol.54 , pp. 763-773
    • Filée, J.1    Forterre, P.2    Sen-Lin, T.3    Laurent, J.4
  • 5
    • 0026560871 scopus 로고
    • The DNA polymerase from the archaebacterium Pyrococcus furiosus does not testify for a specific relationship between archaebacteria and eukaryotes
    • Forterre P. The DNA polymerase from the archaebacterium Pyrococcus furiosus does not testify for a specific relationship between archaebacteria and eukaryotes. Nucleic Acids Res. 20:1992;1811.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 1811
    • Forterre, P.1
  • 6
    • 0032810166 scopus 로고    scopus 로고
    • Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins
    • Forterre P. Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins. Mol. Microbiol. 33:1999;457-465.
    • (1999) Mol. Microbiol. , vol.33 , pp. 457-465
    • Forterre, P.1
  • 7
    • 0033382609 scopus 로고    scopus 로고
    • Functional genomics and enzyme evolution. Homologous and analogous enzymes encoded in microbial genomes
    • Galperin M.Y., Koonin E.V. Functional genomics and enzyme evolution. Homologous and analogous enzymes encoded in microbial genomes. Genetica. 106:1999;159-170.
    • (1999) Genetica , vol.106 , pp. 159-170
    • Galperin, M.Y.1    Koonin, E.V.2
  • 8
    • 0031602973 scopus 로고    scopus 로고
    • Transcription in chloroplasts and mitochondria: A tale of two polymerases
    • Gray M., Lang B. Transcription in chloroplasts and mitochondria: A tale of two polymerases. Trends Microbiol. 6:1998;1-3.
    • (1998) Trends Microbiol. , vol.6 , pp. 1-3
    • Gray, M.1    Lang, B.2
  • 9
    • 1842411934 scopus 로고    scopus 로고
    • Mitochondrial and chloroplast phage-type RNA polymerases in Arabidopsis
    • Hedtke B., Borner T., Weihe A. Mitochondrial and chloroplast phage-type RNA polymerases in Arabidopsis. Science. 277:1997;809-811.
    • (1997) Science , vol.277 , pp. 809-811
    • Hedtke, B.1    Borner, T.2    Weihe, A.3
  • 10
    • 0033576564 scopus 로고    scopus 로고
    • Evolution: The long evolutionary reach of viruses
    • Hendrix R.W. Evolution: The long evolutionary reach of viruses. Curr. Biol. 9:1999;R914-917.
    • (1999) Curr. Biol. , vol.9 , pp. 914-917
    • Hendrix, R.W.1
  • 11
    • 0036133184 scopus 로고    scopus 로고
    • Origin and evolution of viral interleukin-10 and other DNA virus genes with vertebrate homologues
    • Hughes A.L. Origin and evolution of viral interleukin-10 and other DNA virus genes with vertebrate homologues. J. Mol. Evol. 54:2002;90-101.
    • (2002) J. Mol. Evol. , vol.54 , pp. 90-101
    • Hughes, A.L.1
  • 14
    • 0033975419 scopus 로고    scopus 로고
    • The bacterial replicative helicase DnaB evolved from a RecA duplication
    • Leipe D.D., Aravind L., Grishin N.V., Koonin E.V. The bacterial replicative helicase DnaB evolved from a RecA duplication. Genome Res. 10:2000;5-16.
    • (2000) Genome Res. , vol.10 , pp. 5-16
    • Leipe, D.D.1    Aravind, L.2    Grishin, N.V.3    Koonin, E.V.4
  • 15
    • 0033960153 scopus 로고    scopus 로고
    • Horizontal transfer of informational genes
    • Moreira D. Horizontal transfer of informational genes. Mol. Microbiol. 35:2000;1-5.
    • (2000) Mol. Microbiol. , vol.35 , pp. 1-5
    • Moreira, D.1
  • 17
    • 0035694680 scopus 로고    scopus 로고
    • Sequences and replication of genomes of the archaeal rudiviruses SIRV1 and SIRV2: Relationships to the archaeal lipothrixvirus SIFV and some eukaryal viruses
    • Peng X., Blum H., She Q., Mallok S., Brugger K., Garrett R.A., et al. Sequences and replication of genomes of the archaeal rudiviruses SIRV1 and SIRV2: Relationships to the archaeal lipothrixvirus SIFV and some eukaryal viruses. Virology. 291:2001;226-234.
    • (2001) Virology , vol.291 , pp. 226-234
    • Peng, X.1    Blum, H.2    She, Q.3    Mallok, S.4    Brugger, K.5    Garrett, R.A.6
  • 18
    • 0027494836 scopus 로고
    • MUST, a computer package of Management Utilities for Sequences and Trees
    • Philippe H. MUST, a computer package of Management Utilities for Sequences and Trees. Nucleic Acids Res. 21:1993;5264-5272.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 5264-5272
    • Philippe, H.1
  • 19
    • 0036219377 scopus 로고    scopus 로고
    • The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer
    • Sintchak M.D., Arjara G., Kellogg B.A., Stubbe J., Drennan C.L. The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer. Nat. Struct. Biol. 9:2002;293-300.
    • (2002) Nat. Struct. Biol. , vol.9 , pp. 293-300
    • Sintchak, M.D.1    Arjara, G.2    Kellogg, B.A.3    Stubbe, J.4    Drennan, C.L.5
  • 20
    • 0034938364 scopus 로고    scopus 로고
    • Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria
    • Spelbrink J.N., Li F.Y., Tiranti V., Nikali K., Yuan Q.P., Tariq M., et al. Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria. Nat. Genet. 28:2001;223-231.
    • (2001) Nat. Genet. , vol.28 , pp. 223-231
    • Spelbrink, J.N.1    Li, F.Y.2    Tiranti, V.3    Nikali, K.4    Yuan, Q.P.5    Tariq, M.6
  • 21
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:1994;4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 23
    • 0033912561 scopus 로고    scopus 로고
    • A hypothesis for DNA viruses as the origin of eukaryotic replication proteins
    • Villarreal L.P., DeFilippis V.R. A hypothesis for DNA viruses as the origin of eukaryotic replication proteins. J. Virol. 74:2000;7079-7084.
    • (2000) J. Virol. , vol.74 , pp. 7079-7084
    • Villarreal, L.P.1    DeFilippis, V.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.