메뉴 건너뛰기




Volumn 57, Issue 1, 2009, Pages 1-11

Analysis of the mitochondrial genome, transcripts, and electron transport activity in the dinoflagellate Alexandrium catenella (Gonyaulacales, Dinophyceae)

Author keywords

Alexandrium; Dinoflagellate; Electron transporter; Mitochondria; rRNA fragmentation

Indexed keywords

CYTOCHROME; DINOFLAGELLATE; ELECTRON; GENE EXPRESSION; GENOME; MITOCHONDRION; POLYMERASE CHAIN REACTION; PROTEIN; RECOMBINATION; RNA; TOXIC ORGANISM;

EID: 60349101170     PISSN: 13220829     EISSN: 14401835     Source Type: Journal    
DOI: 10.1111/j.1440-1835.2008.00511.x     Document Type: Article
Times cited : (24)

References (32)
  • 1
    • 0021918980 scopus 로고
    • Isolation of ubiquinol oxidase from Paracoccus denitroficans and resolution into cytochrom bc1 and cytochrome c-aa3 complexes
    • Berry, E. A. Trumpower, B. L. 1985. Isolation of ubiquinol oxidase from Paracoccus denitroficans and resolution into cytochrom bc1 and cytochrome c-aa3 complexes. J. Biol. Chem. 260 : 2458 67.
    • (1985) J. Biol. Chem. , vol.260 , pp. 2458-2467
    • Berry, E.A.1    Trumpower, B.L.2
  • 2
    • 0031663016 scopus 로고    scopus 로고
    • A revised six-kingdom system of life
    • Cavalier-Smith, T. 1998. A revised six-kingdom system of life. Biol. Rev. 73 : 203 66.
    • (1998) Biol. Rev. , vol.73 , pp. 203-266
    • Cavalier-Smith, T.1
  • 3
    • 0035998869 scopus 로고    scopus 로고
    • Polyadenylated transcripts containing random gene fragments are expressed in dinoflagellate mitochondria
    • Chaput, H., Wang, Y. Morse, D. 2002. Polyadenylated transcripts containing random gene fragments are expressed in dinoflagellate mitochondria. Protist 153 : 111 22.
    • (2002) Protist , vol.153 , pp. 111-122
    • Chaput, H.1    Wang, Y.2    Morse, D.3
  • 4
    • 1242314743 scopus 로고    scopus 로고
    • Functional polypeptides can be synthesized from human mitochondrial transcripts lacking termination codons
    • Chrzanowska-Lightowlers, Z. M., Temperley, R. J., Smith, P. M., Seneca, S. H. Lightowlers, R. N. 2004. Functional polypeptides can be synthesized from human mitochondrial transcripts lacking termination codons. Biochem. J. 377 : 725 31.
    • (2004) Biochem. J. , vol.377 , pp. 725-731
    • Chrzanowska-Lightowlers, Z.M.1    Temperley, R.J.2    Smith, P.M.3    Seneca, S.H.4    Lightowlers, R.N.5
  • 5
    • 21844446401 scopus 로고    scopus 로고
    • Molecular approaches to the investigation of viable dinoflagellate cysts in natural sediments from estuarine environments
    • Coyne, K. J. Cary, S. C. 2005. Molecular approaches to the investigation of viable dinoflagellate cysts in natural sediments from estuarine environments. J. Eukaryot. Microbiol. 52 : 90 4.
    • (2005) J. Eukaryot. Microbiol. , vol.52 , pp. 90-94
    • Coyne, K.J.1    Cary, S.C.2
  • 6
    • 0034708340 scopus 로고    scopus 로고
    • Expression of mitochondrial protein-coding genes in Tetrahymena pyriformis
    • Edqvist, J., Burger, G. Gray, M. W. 2000. Expression of mitochondrial protein-coding genes in Tetrahymena pyriformis. J. Mol. Biol. 297 : 381 93.
    • (2000) J. Mol. Biol. , vol.297 , pp. 381-393
    • Edqvist, J.1    Burger, G.2    Gray, M.W.3
  • 7
    • 0026603433 scopus 로고
    • Homologies between the contiguous and fragmented rRNAs of the two Plasmodium falciparum extrachromosomal DNAs are limited to core sequences
    • Feagin, J. E., Werner, E., Gardner, M. J., Williamson, D. H. Wilson, R. J. M. 1992. Homologies between the contiguous and fragmented rRNAs of the two Plasmodium falciparum extrachromosomal DNAs are limited to core sequences. Nucleic Acids Res. 20 : 879 87.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 879-887
    • Feagin, J.E.1    Werner, E.2    Gardner, M.J.3    Williamson, D.H.4    Wilson, R.J.M.5
  • 8
    • 0033525788 scopus 로고    scopus 로고
    • Mitochondrial evolution
    • Gray, M. W., Burger, G. Lang, B. F. 1999. Mitochondrial evolution. Science 283 : 1476 81.
    • (1999) Science , vol.283 , pp. 1476-1481
    • Gray, M.W.1    Burger, G.2    Lang, B.F.3
  • 10
    • 0001914227 scopus 로고
    • Culture of phytoplankton for feeding marine invertebrates
    • In. Smith, W. L. Chanley, M. H. (Eds). Plenum Press, New York, pp.
    • Guillard, R. R. L. 1975. Culture of phytoplankton for feeding marine invertebrates. In Smith, W. L. Chanley, M. H. (Eds). Culture of Marine Invertebrates Animals. Plenum Press, New York, pp. 26 60.
    • (1975) Culture of Marine Invertebrates Animals. , pp. 26-60
    • Guillard, R.R.L.1
  • 11
    • 52449083427 scopus 로고    scopus 로고
    • The genome of dinoflagellates
    • In. Katz, L. A. Bhattacharya, D. (Eds). Oxford University Press, New York, pp.
    • Hackett, J. D. Bhattacharya, D. 2006. The genome of dinoflagellates. In Katz, L. A. Bhattacharya, D. (Eds). Genomics and Evolution of Microbial Eukaryotes. Oxford University Press, New York, pp. 48 63.
    • (2006) Genomics and Evolution of Microbial Eukaryotes. , pp. 48-63
    • Hackett, J.D.1    Bhattacharya, D.2
  • 12
    • 0030876371 scopus 로고    scopus 로고
    • Algae or protozoa: Phylogenetic position of euglenophytes and dinoflagellates as inferred from mitochondrial sequences
    • Inagaki, Y., Hayashi-Ishimaru, Y., Ehara, M., Igarashi, I. Ohama, T. 1997. Algae or protozoa: phylogenetic position of euglenophytes and dinoflagellates as inferred from mitochondrial sequences. J. Mol. Evol. 45 : 295 300.
    • (1997) J. Mol. Evol. , vol.45 , pp. 295-300
    • Inagaki, Y.1    Hayashi-Ishimaru, Y.2    Ehara, M.3    Igarashi, I.4    Ohama, T.5
  • 13
    • 35548958368 scopus 로고    scopus 로고
    • Broad genomic and transcriptional analysis reveals a highly derived genome in dinoflagellate mitochondria
    • Jackson, C. J., Norman, J. E., Schnare, M. N., Gray, M. W., Keeling, P. J. Waller, R. F. 2007. Broad genomic and transcriptional analysis reveals a highly derived genome in dinoflagellate mitochondria. BMC Evol. Biol. 5 : 41.
    • (2007) BMC Evol. Biol. , vol.5 , pp. 41
    • Jackson, C.J.1    Norman, J.E.2    Schnare, M.N.3    Gray, M.W.4    Keeling, P.J.5    Waller, R.F.6
  • 14
    • 1642569682 scopus 로고    scopus 로고
    • Loss of the mRNA-like region in mitochondrial tmRNAs of jakobids
    • Jacob, Y., Seif, E., Paquet, P. O. Lang, B. F. 2004. Loss of the mRNA-like region in mitochondrial tmRNAs of jakobids. RNA 10 : 605 14.
    • (2004) RNA , vol.10 , pp. 605-614
    • Jacob, Y.1    Seif, E.2    Paquet, P.O.3    Lang, B.F.4
  • 15
    • 27944466811 scopus 로고    scopus 로고
    • Development of a quantification assay for the cysts of the toxic dinoflagellate Alexandrium tamarense using real-time polymerase chain reaction
    • Kamikawa, R., Hosoi-Tanabe, S., Nagai, S., Itakura, S. Sako, Y. 2005. Development of a quantification assay for the cysts of the toxic dinoflagellate Alexandrium tamarense using real-time polymerase chain reaction. Fish. Sci. 71 : 987 91.
    • (2005) Fish. Sci. , vol.71 , pp. 987-991
    • Kamikawa, R.1    Hosoi-Tanabe, S.2    Nagai, S.3    Itakura, S.4    Sako, Y.5
  • 16
    • 41049093070 scopus 로고    scopus 로고
    • Development of a novel molecular marker on the mitochondrial genome of a toxic dinoflagellates, Alexandrium spp., and its application in single-cell PCR
    • Kamikawa, R., Hosoi-Tanabe, S., Yoshimatsu, S., Oyama, K., Masuda, I. Sako, Y. 2008. Development of a novel molecular marker on the mitochondrial genome of a toxic dinoflagellates, Alexandrium spp., and its application in single-cell PCR. J. Appl. Phycol. 20 : 153 9.
    • (2008) J. Appl. Phycol. , vol.20 , pp. 153-159
    • Kamikawa, R.1    Hosoi-Tanabe, S.2    Yoshimatsu, S.3    Oyama, K.4    Masuda, I.5    Sako, Y.6
  • 17
    • 33947513310 scopus 로고    scopus 로고
    • Fragmentation of mitochondrial large subunit rRNA in the dinoflagellate Alexandrium catenella and the evolution of rRNA structure in alveolate mitochondria
    • Kamikawa, R., Inagaki, Y. Sako, Y. 2007. Fragmentation of mitochondrial large subunit rRNA in the dinoflagellate Alexandrium catenella and the evolution of rRNA structure in alveolate mitochondria. Protist 158 : 139 45.
    • (2007) Protist , vol.158 , pp. 139-145
    • Kamikawa, R.1    Inagaki, Y.2    Sako, Y.3
  • 18
    • 0036303481 scopus 로고    scopus 로고
    • Widespread and extensive editing of mitochondrial mRNAs in dinoflagellates
    • Lin, S., Zhang, H., Spencer, D. F., Norman, J. E. Gray, M. W. 2002. Widespread and extensive editing of mitochondrial mRNAs in dinoflagellates. J. Mol. Biol. 320 : 727 39.
    • (2002) J. Mol. Biol. , vol.320 , pp. 727-739
    • Lin, S.1    Zhang, H.2    Spencer, D.F.3    Norman, J.E.4    Gray, M.W.5
  • 19
    • 0037155579 scopus 로고    scopus 로고
    • Skiing toward nonstop mRNA decay
    • Maquat, L. E. 2002. Skiing toward nonstop mRNA decay. Science 295 : 2221 2.
    • (2002) Science , vol.295 , pp. 2221-2222
    • Maquat, L.E.1
  • 20
    • 0842267214 scopus 로고    scopus 로고
    • Reprogrammed genetic decoding in cellular gene expression
    • Namy, O., Rousset, J. P., Napthine, S. Brierley, I. 2004. Reprogrammed genetic decoding in cellular gene expression. Mol. Cell. 13 : 157 68.
    • (2004) Mol. Cell. , vol.13 , pp. 157-168
    • Namy, O.1    Rousset, J.P.2    Napthine, S.3    Brierley, I.4
  • 22
    • 0034825471 scopus 로고    scopus 로고
    • A complex organization of the gene encoding cytochrome oxidase subunit 1 in the mitochondrial genome of the dinoflagellate, Crypthecodinium cohnii: Homologous recombination generates two different cox1 open reading frames
    • Norman, J. E. Gray, M. W. 2001. A complex organization of the gene encoding cytochrome oxidase subunit 1 in the mitochondrial genome of the dinoflagellate, Crypthecodinium cohnii: homologous recombination generates two different cox1 open reading frames. J. Mol. Evol. 53 : 351 63.
    • (2001) J. Mol. Evol. , vol.53 , pp. 351-363
    • Norman, J.E.1    Gray, M.W.2
  • 23
    • 34247899047 scopus 로고    scopus 로고
    • Multiple gene phylogenies support the monophyly of cryptomonad and haptophyte host lineages
    • Patron, N., Inagaki, Y. Keeling, P. J. 2007. Multiple gene phylogenies support the monophyly of cryptomonad and haptophyte host lineages. Curr. Biol. 17 : 887 91.
    • (2007) Curr. Biol. , vol.17 , pp. 887-891
    • Patron, N.1    Inagaki, Y.2    Keeling, P.J.3
  • 25
    • 0033991171 scopus 로고    scopus 로고
    • Transcriptional mapping and RNA processing of the Plasmodium falciparum mitochondrial mRNAs
    • Rehkopf, D. H., Gillespie, D. E., Harrell, M. I. Feagin, J. E. 2000. Transcriptional mapping and RNA processing of the Plasmodium falciparum mitochondrial mRNAs. Mol. Biochem. Parasitol. 105 : 91 103.
    • (2000) Mol. Biochem. Parasitol. , vol.105 , pp. 91-103
    • Rehkopf, D.H.1    Gillespie, D.E.2    Harrell, M.I.3    Feagin, J.E.4
  • 26
    • 0034736514 scopus 로고    scopus 로고
    • Evolution of the mitochondrial genetic system: An overview
    • Saccone, C., Gissi, C., Lanave, C., Larizza, A., Pesole, G. Reyes, A. 2000. Evolution of the mitochondrial genetic system: an overview. Gene 261 : 153 9.
    • (2000) Gene , vol.261 , pp. 153-159
    • Saccone, C.1    Gissi, C.2    Lanave, C.3    Larizza, A.4    Pesole, G.5    Reyes, A.6
  • 27
    • 0035686195 scopus 로고    scopus 로고
    • Purification and characterization of a sulfotransferase specific to N-21 of saxitoxin and gonyautoxin 2+3 from the toxic dinoflagellate Gymnodinium catenatum (Dinophyceae)
    • Sako, Y., Yoshida, T., Uchida, A., Arakawa, O., Noguchi, T. Ishida, Y. 2001. Purification and characterization of a sulfotransferase specific to N-21 of saxitoxin and gonyautoxin 2+3 from the toxic dinoflagellate Gymnodinium catenatum (Dinophyceae). J. Phycol. 37 : 1051 5.
    • (2001) J. Phycol. , vol.37 , pp. 1051-1055
    • Sako, Y.1    Yoshida, T.2    Uchida, A.3    Arakawa, O.4    Noguchi, T.5    Ishida, Y.6
  • 28
    • 34547938897 scopus 로고    scopus 로고
    • The highly reduced and fragmented mitochondrial genome of the early-branching dinoflagellate Oxyrrhis marina shares characteristics with both apicomplexan and dinoflagellate mitochondrial genomes
    • Slamovits, C. H., Saldarriaga, J. F., Larocque, A. Keeling, P. J. 2007. The highly reduced and fragmented mitochondrial genome of the early-branching dinoflagellate Oxyrrhis marina shares characteristics with both apicomplexan and dinoflagellate mitochondrial genomes. J. Mol. Biol. 372 : 356 68.
    • (2007) J. Mol. Biol. , vol.372 , pp. 356-368
    • Slamovits, C.H.1    Saldarriaga, J.F.2    Larocque, A.3    Keeling, P.J.4
  • 29
    • 0018787277 scopus 로고
    • Purification of a reconstructively active iron-sulfur protein (oxidation factor) from succinate cytochrome c reductase complex of bovine heart mitochondria
    • Trumpower, B. L. Edwards, C. A. 1979. Purification of a reconstructively active iron-sulfur protein (oxidation factor) from succinate cytochrome c reductase complex of bovine heart mitochondria. J. Biol. Chem. 254 : 8697 706.
    • (1979) J. Biol. Chem. , vol.254 , pp. 8697-8706
    • Trumpower, B.L.1    Edwards, C.A.2
  • 30
    • 0029789623 scopus 로고    scopus 로고
    • A quantitative map of nucleotide substitution rates in bacterial rRNA
    • Van de Peer, Y., Chapelle, S. De Wachter, R. 1996. A quantitative map of nucleotide substitution rates in bacterial rRNA. Nucleic Acids Res. 24 : 3381 91.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3381-3391
    • Van De Peer, Y.1    Chapelle, S.2    De Wachter, R.3
  • 31
    • 33750084191 scopus 로고    scopus 로고
    • Alveolate and chlorophycean mitochondrial cox2 genes split twice independently
    • Waller, R. F. Keeling, P. J. 2006. Alveolate and chlorophycean mitochondrial cox2 genes split twice independently. Gene 383 : 33 7.
    • (2006) Gene , vol.383 , pp. 33-37
    • Waller, R.F.1    Keeling, P.J.2
  • 32
    • 0033536215 scopus 로고    scopus 로고
    • Single gene circles in dinoflagellate chloroplast genomes
    • Zhang, Z., Green, B. R. Cavalier-Smith, T. 1999. Single gene circles in dinoflagellate chloroplast genomes. Nature 400 : 155 9.
    • (1999) Nature , vol.400 , pp. 155-159
    • Zhang, Z.1    Green, B.R.2    Cavalier-Smith, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.