메뉴 건너뛰기




Volumn 4, Issue 3, 2010, Pages 183-188

An approach to rational ligand-design based on a thermodynamic analysis

Author keywords

Antibody; Ciguatoxin; Fragment design; Isothermal titration calorimetry (itc); Ligand screening; Thermodynamic analysis

Indexed keywords

ANTIBODIES; ANTIGENS; CALORIMETERS; CALORIMETRY; ENTHALPY; ENTROPY; HYDROGEN BONDS; ISOTHERMS; LEAD COMPOUNDS; STRUCTURAL DESIGN; TITRATION; VAN DER WAALS FORCES;

EID: 78650020361     PISSN: 18722083     EISSN: None     Source Type: Journal    
DOI: 10.2174/187220810793611482     Document Type: Article
Times cited : (6)

References (27)
  • 8
    • 34250641961 scopus 로고    scopus 로고
    • Isothermal titration calorimetry to determine association constants for high-affinity ligands
    • Velazquez-Campoy A, Freire E. Isothermal titration calorimetry to determine association constants for high-affinity ligands. Nat Protoc 2006; 1(1): 186-191.
    • (2006) Nat Protoc , vol.1 , Issue.1 , pp. 186-191
    • Velazquez-Campoy, A.1    Freire, E.2
  • 9
    • 0024356301 scopus 로고
    • Rapid measurement of binding constants and heats of binding using a new titration calorimeter
    • Wiseman T, Williston S, Brandts JF, Lin LN. Rapid measurement of binding constants and heats of binding using a new titration calorimeter. Anal Biochem 1989; 179(1): 131-137.
    • (1989) Anal Biochem , vol.179 , Issue.1 , pp. 131-137
    • Wiseman, T.1    Williston, S.2    Brandts, J.F.3    Lin, L.N.4
  • 13
    • 36949004094 scopus 로고    scopus 로고
    • The role and significance of unconventional hydrogen bonds in small molecule recognition by biological receptors of pharmaceutical relevance
    • Tóth G, Bowers SG, Truong AP, Probst G. The role and significance of unconventional hydrogen bonds in small molecule recognition by biological receptors of pharmaceutical relevance. Curr Pharm Des 2007; 13(34): 3476-3493.
    • (2007) Curr Pharm Des , vol.13 , Issue.34 , pp. 3476-3493
    • Tóth, G.1    Bowers, S.G.2    Truong, A.P.3    Probst, G.4
  • 15
    • 45549103272 scopus 로고    scopus 로고
    • Critical contribution of aromatic rings to specific recognition of polyether rings. The case of ciguatoxin CTX3C-ABC and its specific antibody 1C49
    • Tsumoto K, Yokota A, Tanaka Y, Ui M, Tsumuraya T, Fujii I, et al. Critical contribution of aromatic rings to specific recognition of polyether rings. The case of ciguatoxin CTX3C-ABC and its specific antibody 1C49. J Biol Chem 2008; 283(18): 12259-12266.
    • (2008) J Biol Chem , vol.283 , Issue.18 , pp. 12259-12266
    • Tsumoto, K.1    Yokota, A.2    Tanaka, Y.3    Ui, M.4    Tsumuraya, T.5    Fujii, I.6
  • 16
    • 38049144318 scopus 로고    scopus 로고
    • A synthetic host-guest system achieves avidin-biotin affinity by overcoming enthalpy-entropy compensation
    • Rekharsky MV, Mori T, Yang C, Ko YH, Selvapalam N, Kim H, et al. A synthetic host-guest system achieves avidin-biotin affinity by overcoming enthalpy-entropy compensation. Proc Natl Acad Sci USA 2007; 104(52): 20737-20742.
    • (2007) Proc Natl Acad Sci USA , vol.104 , Issue.52 , pp. 20737-20742
    • Rekharsky, M.V.1    Mori, T.2    Yang, C.3    Ko, Y.H.4    Selvapalam, N.5    Kim, H.6
  • 18
    • 0034093758 scopus 로고    scopus 로고
    • HIV-1 protease inhibitors: Enthalpic versus entropic optimization of the binding affinity
    • Velazquez-Campoy A, Todd MJ, Freire E. HIV-1 protease inhibitors: enthalpic versus entropic optimization of the binding affinity. Biochemistry 2000; 39(9): 2201-2207.
    • (2000) Biochemistry , vol.39 , Issue.9 , pp. 2201-2207
    • Velazquez-Campoy, A.1    Todd, M.J.2    Freire, E.3
  • 19
    • 0035876257 scopus 로고    scopus 로고
    • The binding energetics of first- and second-generation HIV-1 protease inhibitors: Implications for drug design
    • Velazquez-Campoy A, Kiso Y, Freire E. The binding energetics of first- and second-generation HIV-1 protease inhibitors: implications for drug design. Arch Biochem Biophys 2001; 390(2): 169-175.
    • (2001) Arch Biochem Biophys , vol.390 , Issue.2 , pp. 169-175
    • Velazquez-Campoy, A.1    Kiso, Y.2    Freire, E.3
  • 20
    • 0037047028 scopus 로고    scopus 로고
    • Amplification of the effects of drug resistance mutations by background polymorphisms in HIV-1 protease from African subtypes
    • Velazquez-Campoy A, Vega S, Freire E. Amplification of the effects of drug resistance mutations by background polymorphisms in HIV-1 protease from African subtypes. Biochemistry 2002; 41(27): 8613-8619.
    • (2002) Biochemistry , vol.41 , Issue.27 , pp. 8613-8619
    • Velazquez-Campoy, A.1    Vega, S.2    Freire, E.3
  • 21
    • 0036078615 scopus 로고    scopus 로고
    • Overcoming drug resistance in HIV-1 chemotherapy: The binding thermodynamics of Amprenavir and TMC-126 to wild-type and drug-resistant mutants of the HIV-1 protease
    • Ohtaka H, Velázquez-Campoy A, Xie D, Freire E. Overcoming drug resistance in HIV-1 chemotherapy: the binding thermodynamics of Amprenavir and TMC-126 to wild-type and drug-resistant mutants of the HIV-1 protease. Protein Sci 2002; 11(8): 1908-1916.
    • (2002) Protein Sci , vol.11 , Issue.8 , pp. 1908-1916
    • Ohtaka, H.1    Velázquez-Campoy, A.2    Xie, D.3    Freire, E.4
  • 22
    • 0344823654 scopus 로고    scopus 로고
    • Multidrug resistance to HIV-1 protease inhibition requires cooperative coupling between distal mutations
    • Ohtaka H, Schön A, Freire E. Multidrug resistance to HIV-1 protease inhibition requires cooperative coupling between distal mutations. Biochemistry 2003; 42(46): 13659-13666.
    • (2003) Biochemistry , vol.42 , Issue.46 , pp. 13659-13666
    • Ohtaka, H.1    Schön, A.2    Freire, E.3
  • 23
    • 52049123291 scopus 로고    scopus 로고
    • Do enthalpy and entropy distinguish first in class from best in class?
    • Freire E. Do enthalpy and entropy distinguish first in class from best in class? Drug Discov Today 2008; 13: 869-874.
    • (2008) Drug Discov Today , vol.13 , pp. 869-874
    • Freire, E.1
  • 25
    • 50349100083 scopus 로고    scopus 로고
    • How protein recognizes ladder-like polycyclic ethers. Interactions between ciguatoxin (CTX3C) fragments and its specific antibody 10C9
    • Ui M, Tanaka Y, Tsumuraya T, Fujii I, Inoue M, Hirama M, et al. How protein recognizes ladder-like polycyclic ethers. Interactions between ciguatoxin (CTX3C) fragments and its specific antibody 10C9. J Biol Chem 2008; 283(28): 19440-19447.
    • (2008) J Biol Chem , vol.283 , Issue.28 , pp. 19440-19447
    • Ui, M.1    Tanaka, Y.2    Tsumuraya, T.3    Fujii, I.4    Inoue, M.5    Hirama, M.6
  • 26
    • 0037532666 scopus 로고    scopus 로고
    • Synthesis-based approach toward direct sandwich immu-noassay for ciguatoxin CTX3C
    • Oguri H, Hirama M, Tsumuraya T, Fujii I, Maruyama M, Uehara H, et al. Synthesis-based approach toward direct sandwich immu-noassay for ciguatoxin CTX3C. J Am Chem Soc 2003; 125(25): 7608-7612.
    • (2003) J Am Chem Soc , vol.125 , Issue.25 , pp. 7608-7612
    • Oguri, H.1    Hirama, M.2    Tsumuraya, T.3    Fujii, I.4    Maruyama, M.5    Uehara, H.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.