메뉴 건너뛰기




Volumn 20, Issue 8, 2010, Pages 1122-1132

A genome-wide map of human genetic interactions inferred from radiation hybrid genotypes

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; GENE INTERACTION; GENOTYPE; HUMAN; HUMAN GENOME; HYBRID; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RADIATION HYBRID MAPPING;

EID: 77954760827     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.104216.109     Document Type: Article
Times cited : (74)

References (69)
  • 1
    • 67650889108 scopus 로고    scopus 로고
    • Directed mammalian gene regulatory networks using expression and comparative genomic hybridization microarray data from radiation hybrids
    • doi: 10.1371/journal.pcbi.1000407
    • Ahn S, Wang RT, Park CC, Lin A, Leahy RM, Lange K, Smith DJ. 2009. Directed mammalian gene regulatory networks using expression and comparative genomic hybridization microarray data from radiation hybrids. PLoS Comput Biol 5: e1000407. doi: 10.1371/journal.pcbi.1000407.
    • (2009) PLoS Comput Biol , vol.5
    • Ahn, S.1    Wang, R.T.2    Park, C.C.3    Lin, A.4    Leahy, R.M.5    Lange, K.6    Smith, D.J.7
  • 2
    • 0036013593 scopus 로고    scopus 로고
    • Statistical mechanics of complex networks
    • Albert R, Barabasi AL. 2002. Statistical mechanics of complex networks. Rev Mod Phys 74: 47-97.
    • (2002) Rev Mod Phys , vol.74 , pp. 47-97
    • Albert, R.1    Barabasi, A.L.2
  • 6
    • 0038483826 scopus 로고    scopus 로고
    • Emergence of scaling in random networks
    • Barabasi AL, Albert R. 1999. Emergence of scaling in random networks. Science 286: 509-512.
    • (1999) Science , vol.286 , pp. 509-512
    • Barabasi, A.L.1    Albert, R.2
  • 7
    • 33745969837 scopus 로고    scopus 로고
    • Members of RTP and REEP gene families influence functional bitter taste receptor expression
    • DOI 10.1074/jbc.M513637200
    • Behrens M, Bartelt J, Reichling C, Winnig M, Kuhn C, Meyerhof W. 2006. Members of RTP and REEP gene families influence functional bitter taste receptor expression. J Biol Chem 281: 20650-20659. (Pubitemid 44065836)
    • (2006) Journal of Biological Chemistry , vol.281 , Issue.29 , pp. 20650-20659
    • Behrens, M.1    Bartelt, J.2    Reichling, C.3    Winnig, M.4    Kuhn, C.5    Meyerhof, W.6
  • 8
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. 1995. Controlling the false discovery rate: A practical and powerful approach to multiple testing. J R Stat Soc Ser B Methodol 57: 289-300.
    • (1995) J R Stat Soc Ser B Methodol , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 13
  • 14
    • 0036580169 scopus 로고    scopus 로고
    • Protein interactions: Two methods for assessment of the reliability of high throughput observations
    • Deane CM, Salwinski L, Xenarios I, Eisenberg D. 2002. Protein interactions: Two methods for assessment of the reliability of high throughput observations. Mol Cell Proteomics 1: 349-356.
    • (2002) Mol Cell Proteomics , vol.1 , pp. 349-356
    • Deane, C.M.1    Salwinski, L.2    Xenarios, I.3    Eisenberg, D.4
  • 16
    • 84865730611 scopus 로고
    • A set of measures of centrality based on betweenness
    • Freeman LC. 1977. A set of measures of centrality based on betweenness. Sociometry 40: 35-41.
    • (1977) Sociometry , vol.40 , pp. 35-41
    • Freeman, L.C.1
  • 20
    • 0016862453 scopus 로고
    • New method for mapping genes in human chromosomes
    • Goss SJ, Harris H. 1975. New method for mapping genes in human chromosomes. Nature 255: 680-684.
    • (1975) Nature , vol.255 , pp. 680-684
    • Goss, S.J.1    Harris, H.2
  • 22
    • 16344381521 scopus 로고    scopus 로고
    • Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks
    • Hahn MW, Kern AD. 2005. Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks. Mol Biol Evol 22: 803-806.
    • (2005) Mol Biol Evol , vol.22 , pp. 803-806
    • Hahn, M.W.1    Kern, A.D.2
  • 24
    • 0035998736 scopus 로고    scopus 로고
    • Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders
    • Hamosh A, Scott AF, Amberger J, Bocchini C, Valle D, McKusick VA. 2002. Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders. Nucleic Acids Res 30: 52-55.
    • (2002) Nucleic Acids Res , vol.30 , pp. 52-55
    • Hamosh, A.1    Scott, A.F.2    Amberger, J.3    Bocchini, C.4    Valle, D.5    McKusick, V.A.6
  • 26
    • 77951115122 scopus 로고    scopus 로고
    • International network of cancer genome projects
    • The International Cancer Genome Consortium
    • The International Cancer Genome Consortium. 2010. International network of cancer genome projects. Nature 464: 993-998.
    • (2010) Nature , vol.464 , pp. 993-998
  • 31
    • 27744469130 scopus 로고    scopus 로고
    • High-betweenness proteins in the yeast protein interaction network
    • Joy MP, Brock A, Ingber DE, Huang S. 2005. High-betweenness proteins in the yeast protein interaction network. J Biomed Biotechnol 2005: 96-103.
    • (2005) J Biomed Biotechnol , vol.2005 , pp. 96-103
    • Joy, M.P.1    Brock, A.2    Ingber, D.E.3    Huang, S.4
  • 33
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • Kanehisa M, Goto S. 2000. KEGG: Kyoto encyclopedia of genes and genomes. Nucleic Acids Res 28: 27-30. (Pubitemid 30047706)
    • (2000) Nucleic Acids Research , vol.28 , Issue.1 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 36
    • 27744432926 scopus 로고    scopus 로고
    • Revisiting "scale-free" networks
    • Keller EF. 2005. Revisiting "scale-free" networks. Bioessays 27: 1060-1068.
    • (2005) Bioessays , vol.27 , pp. 1060-1068
    • Keller, E.F.1
  • 37
    • 22844450110 scopus 로고    scopus 로고
    • Systematic interpretation of genetic interactions using protein networks
    • DOI 10.1038/nbt1096
    • Kelley R, Ideker T. 2005. Systematic interpretation of genetic interactions using protein networks. Nat Biotechnol 23: 561-566. (Pubitemid 41724894)
    • (2005) Nature Biotechnology , vol.23 , Issue.5 , pp. 561-566
    • Kelley, R.1    Ideker, T.2
  • 41
    • 9444239213 scopus 로고    scopus 로고
    • A probabilistic functional network of yeast genes
    • DOI 10.1126/science.1099511
    • Lee I, Date SV, Adai AT, Marcotte EM. 2004. A probabilistic functional network of yeast genes. Science 306: 1555-1558. (Pubitemid 39564951)
    • (2004) Science , vol.306 , Issue.5701 , pp. 1555-1558
    • Lee, I.1    Date, S.V.2    Adai, A.T.3    Marcotte, E.M.4
  • 42
    • 38649138295 scopus 로고    scopus 로고
    • A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans
    • DOI 10.1038/ng.2007.70, PII NG200770
    • Lee I, Lehner B, Crombie C, Wong W, Fraser AG, Marcotte EM. 2008. A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans. Nat Genet 40: 181-188. (Pubitemid 351171397)
    • (2008) Nature Genetics , vol.40 , Issue.2 , pp. 181-188
    • Lee, I.1    Lehner, B.2    Crombie, C.3    Wong, W.4    Fraser, A.G.5    Marcotte, E.M.6
  • 43
    • 33746525415 scopus 로고    scopus 로고
    • Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways
    • DOI 10.1038/ng1844, PII NG1844
    • Lehner B, Crombie C, Tischler J, Fortunato A, Fraser AG. 2006. Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways. Nat Genet 38: 896-903. (Pubitemid 44141657)
    • (2006) Nature Genetics , vol.38 , Issue.8 , pp. 896-903
    • Lehner, B.1    Crombie, C.2    Tischler, J.3    Fortunato, A.4    Fraser, A.G.5
  • 49
    • 42049117185 scopus 로고    scopus 로고
    • A simple method for combining genetic mapping data from multiple crosses and experimental designs
    • doi: 10.1371/journal.pone.0001036
    • Peirce JL, Broman KW, Lu L, Williams RW. 2007. A simple method for combining genetic mapping data from multiple crosses and experimental designs. PLoS One 2: e1036. doi: 10.1371/journal.pone.0001036.
    • (2007) PLoS One , vol.2
    • Peirce, J.L.1    Broman, K.W.2    Lu, L.3    Williams, R.W.4
  • 51
    • 55449129519 scopus 로고    scopus 로고
    • Evidence of a large-scale functional organization of mammalian chromosomes
    • doi: 10.1371/journal.pgen.0010033
    • Petkov PM, Graber JH, Churchill GA, DiPetrillo K, King BL, Paigen K. 2005. Evidence of a large-scale functional organization of mammalian chromosomes. PLoS Genet 1: e33. doi: 10.1371/journal.pgen.0010033.
    • (2005) PLoS Genet , vol.1
    • Petkov, P.M.1    Graber, J.H.2    Churchill, G.A.3    DiPetrillo, K.4    King, B.L.5    Paigen, K.6
  • 55
    • 8844270180 scopus 로고    scopus 로고
    • RTP family members induce functional expression of mammalian odorant receptors
    • DOI 10.1016/j.cell.2004.11.021, PII S009286740401089X
    • Saito H, Kubota M, Roberts RW, Chi Q, Matsunami H. 2004. RTP family members induce functional expression of mammalian odorant receptors. Cell 119: 679-691. (Pubitemid 39535755)
    • (2004) Cell , vol.119 , Issue.5 , pp. 679-691
    • Saito, H.1    Kubota, M.2    Roberts, R.W.3    Chi, Q.4    Matsunami, H.5
  • 57
    • 0029975669 scopus 로고    scopus 로고
    • Prostaglandin endoperoxide Hsynthases-1 and -2
    • Smith WL, Dewitt DL. 1996. Prostaglandin endoperoxide Hsynthases-1 and -2. Adv Immunol 62: 167-215.
    • (1996) Adv Immunol , vol.62 , pp. 167-215
    • Smith, W.L.1    Dewitt, D.L.2
  • 59
    • 41349102391 scopus 로고    scopus 로고
    • Evolutionary plasticity of genetic interaction networks
    • Tischler J, Lehner B, Fraser AG. 2008. Evolutionary plasticity of genetic interaction networks. Nat Genet 40: 390-391.
    • (2008) Nat Genet , vol.40 , pp. 390-391
    • Tischler, J.1    Lehner, B.2    Fraser, A.G.3
  • 64
    • 70249088327 scopus 로고    scopus 로고
    • Genomic views of distant-acting enhancers
    • Visel A, Rubin EM, Pennacchio LA. 2009. Genomic views of distant-acting enhancers. Nature 461: 199-205.
    • (2009) Nature , vol.461 , pp. 199-205
    • Visel, A.1    Rubin, E.M.2    Pennacchio, L.A.3
  • 66
    • 0032482432 scopus 로고    scopus 로고
    • Collective dynamics of "small-world" networks
    • Watts DJ, Strogatz SH. 1998. Collective dynamics of "small- world" networks. Nature 393: 440-442.
    • (1998) Nature , vol.393 , pp. 440-442
    • Watts, D.J.1    Strogatz, S.H.2
  • 67
    • 2442477788 scopus 로고    scopus 로고
    • Genomic analysis of essentiality within protein networks
    • DOI 10.1016/j.tig.2004.04.008, PII S0168952504001015
    • Yu H, Greenbaum D, Xin Lu H, Zhu X, Gerstein M. 2004. Genomic analysis of essentiality within protein networks. Trends Genet 20: 227-231. (Pubitemid 38625679)
    • (2004) Trends in Genetics , vol.20 , Issue.6 , pp. 227-231
    • Yu, H.1    Greenbaum, D.2    Lu, H.X.3    Zhu, X.4    Gerstein, M.5
  • 68
    • 34247622363 scopus 로고    scopus 로고
    • The importance of bottlenecks in protein networks: Correlation with gene essentiality and expression dynamics
    • doi: 10.1371/journal.pcbi.0030059
    • Yu H, Kim PM, Sprecher E, Trifonov V, Gerstein M. 2007. The importance of bottlenecks in protein networks: Correlation with gene essentiality and expression dynamics. PLoS Comput Biol 3: e59. doi: 10.1371/journal.pcbi.0030059.
    • (2007) PLoS Comput Biol , vol.3
    • Yu, H.1    Kim, P.M.2    Sprecher, E.3    Trifonov, V.4    Gerstein, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.