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Volumn 9, Issue 10, 2010, Pages 1886-1892

Does interference between replication and transcription contribute to genomic instability in cancer cells?

Author keywords

Cancer; ChIPchip; DNA replication; Genomic instability; Transcription

Indexed keywords

CAMPTOTHECIN; DIOSPYRIN; DNA TOPOISOMERASE; HISTONE H2AX;

EID: 77953634888     PISSN: 15384101     EISSN: 15514005     Source Type: Journal    
DOI: 10.4161/cc.9.10.11539     Document Type: Review
Times cited : (24)

References (44)
  • 1
    • 35848970059 scopus 로고    scopus 로고
    • Chromosomal instability in cancer: Causality and interdependence
    • Venkitaraman AR. Chromosomal instability in cancer: causality and interdependence. Cell Cycle 2007; 6:2341-3.
    • (2007) Cell Cycle , vol.6 , pp. 2341-2343
    • Venkitaraman, A.R.1
  • 2
    • 39449096135 scopus 로고    scopus 로고
    • Genome instability: A mechanistic view of its causes and consequences
    • DOI 10.1038/nrg2268, PII NRG2268
    • Aguilera A, Gomez-Gonzalez B. Genome instability: a mechanistic view of its causes and consequences. Nat Rev Genet 2008; 9:204-17. (Pubitemid 351271797)
    • (2008) Nature Reviews Genetics , vol.9 , Issue.3 , pp. 204-217
    • Aguilera, A.1    Gomez-Gonzalez, B.2
  • 3
    • 0032542364 scopus 로고    scopus 로고
    • Genetic instabilities in human cancers
    • Lengauer C, Kinzler KW, Vogelstein B. Genetic instabilities in human cancers. Nature 1998; 396:643-9.
    • (1998) Nature , vol.396 , pp. 643-649
    • Lengauer, C.1    Kinzler, K.W.2    Vogelstein, B.3
  • 4
    • 34447108090 scopus 로고    scopus 로고
    • Genomic instability: On the birth and death of cancer
    • Murga M, Fernandez-Capetillo O. Genomic instability: on the birth and death of cancer. Clin Transl Oncol 2007; 9:216-20.
    • (2007) Clin Transl Oncol , vol.9 , pp. 216-220
    • Murga, M.1    Fernandez-Capetillo, O.2
  • 5
    • 40449120350 scopus 로고    scopus 로고
    • An Oncogene-Induced DNA Damage Model for Cancer Development
    • Halazonetis TD, Gorgoulis VG, Bartek J. An Oncogene-Induced DNA Damage Model for Cancer Development. Science 2008; 319:1352-5.
    • (2008) Science , vol.319 , pp. 1352-1355
    • Halazonetis, T.D.1    Gorgoulis, V.G.2    Bartek, J.3
  • 6
    • 34548841678 scopus 로고    scopus 로고
    • Replicational stress selects for p53 mutation
    • Marusyk A, DeGregori J. Replicational stress selects for p53 mutation. Cell Cycle 2007; 6:2148-51. (Pubitemid 47450416)
    • (2007) Cell Cycle , vol.6 , Issue.17 , pp. 2148-2151
    • Marusyk, A.1    DeGregori, J.2
  • 7
    • 34249935010 scopus 로고    scopus 로고
    • Maintenance of fork integrity at damaged DNA and natural pause sites
    • DOI 10.1016/j.dnarep.2007.02.004, PII S1568786407000547, Replication Fork Repair Processes
    • Tourriere H, Pasero P. Maintenance of fork integrity at damaged DNA and natural pause sites. DNA Repair 2007; 6:900-13. (Pubitemid 46880471)
    • (2007) DNA Repair , vol.6 , Issue.7 , pp. 900-913
    • Tourriere, H.1    Pasero, P.2
  • 8
    • 0029740114 scopus 로고    scopus 로고
    • DNA replication fork pause sites dependent on transcription
    • Deshpande AM, Newlon CS. DNA replication fork pause sites dependent on transcription. Science 1996; 272:1030-3.
    • (1996) Science , vol.272 , pp. 1030-1033
    • Deshpande, A.M.1    Newlon, C.S.2
  • 9
    • 67449113551 scopus 로고    scopus 로고
    • Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae
    • Azvolinsky A, Giresi PG, Lieb JD, Zakian VA. Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae. Mol Cell 2009; 34:722-34.
    • (2009) Mol Cell , vol.34 , pp. 722-734
    • Azvolinsky, A.1    Giresi, P.G.2    Lieb, J.D.3    Zakian, V.A.4
  • 10
    • 17144426028 scopus 로고    scopus 로고
    • Impairment of replication fork progression mediates RNA polII transcription-associated recombination
    • DOI 10.1038/sj.emboj.7600602
    • Prado F, Aguilera A. Impairment of replication fork progression mediates RNA polII transcription-associated recombination. EMBO J 2005; 24:1267-76. (Pubitemid 40516609)
    • (2005) EMBO Journal , vol.24 , Issue.6 , pp. 1267-1276
    • Prado, F.1    Aguilera, A.2
  • 11
    • 0038046165 scopus 로고    scopus 로고
    • Transcription-dependent recombination and the role of fork collision in yeast rDNA
    • Takeuchi Y, Horiuchi T, Kobayashi T. Transcription-dependent recombination and the role of fork collision in yeast rDNA. Genes Dev 2003; 17:1497-506.
    • (2003) Genes Dev , vol.17 , pp. 1497-1506
    • Takeuchi, Y.1    Horiuchi, T.2    Kobayashi, T.3
  • 12
    • 0036469913 scopus 로고    scopus 로고
    • The connection between transcription and genomic instability
    • Aguilera A. The connection between transcription and genomic instability. EMBO J 2002; 21:195-201.
    • (2002) EMBO J , vol.21 , pp. 195-201
    • Aguilera, A.1
  • 13
    • 37549026516 scopus 로고    scopus 로고
    • Transcription-Associated Recombination Is Dependent on Replication in Mammalian Cells
    • Gottipati P, Cassel TN, Savolainen L, Helleday T. Transcription- Associated Recombination Is Dependent on Replication in Mammalian Cells. Mol Cell Biol 2008; 28:154-64.
    • (2008) Mol Cell Biol , vol.28 , pp. 154-164
    • Gottipati, P.1    Cassel, T.N.2    Savolainen, L.3    Helleday, T.4
  • 14
    • 70449522304 scopus 로고    scopus 로고
    • Topoisomerase 1 suppresses replication stress and genomic instability by preventing interference between replication and transcription
    • Tuduri S, Crabbe L, Conti C, Tourriere H, Holtgreve-Grez H, Jauch A, et al. Topoisomerase 1 suppresses replication stress and genomic instability by preventing interference between replication and transcription. Nat Cell Biol 2009; 11:1315-24.
    • (2009) Nat Cell Biol , vol.11 , pp. 1315-1324
    • Tuduri, S.1    Crabbe, L.2    Conti, C.3    Tourriere, H.4    Holtgreve-Grez, H.5    Jauch, A.6
  • 15
    • 33749034730 scopus 로고    scopus 로고
    • Topoisomerase I inhibitors: Camptothecins and beyond
    • Pommier Y. Topoisomerase I inhibitors: camptothecins and beyond. Nat Rev Cancer 2006; 6:789-802.
    • (2006) Nat Rev Cancer , vol.6 , pp. 789-802
    • Pommier, Y.1
  • 16
    • 15844415445 scopus 로고    scopus 로고
    • Specific phosphorylation of SR proteins by mammalian DNA topoisomerase I
    • Rossi F, Labourier E, Forne T, Divita G, Derancourt J, Riou JF, et al. Specific phosphorylation of SR proteins by mammalian DNA topoisomerase I. Nature 1996; 381:80-2.
    • (1996) Nature , vol.381 , pp. 80-82
    • Rossi, F.1    Labourier, E.2    Forne, T.3    Divita, G.4    Derancourt, J.5    Riou, J.F.6
  • 17
    • 0346365373 scopus 로고    scopus 로고
    • Altered Serine/Arginine-Rich Protein Phosphorylation and Exonic Enhancer-Dependent Splicing in Mammalian Cells Lacking Topoisomerase I
    • Soret J, Gabut M, Dupon C, Kohlhagen G, Stevenin J, Pommier Y, et al. Altered serine/arginine-rich protein phosphorylation and exonic enhancer-dependent splicing in Mammalian cells lacking topoisomerase I. Cancer Res 2003; 63:8203-11. (Pubitemid 37549469)
    • (2003) Cancer Research , vol.63 , Issue.23 , pp. 8203-8211
    • Soret, J.1    Gabut, M.2    Dupon, C.3    Kohlhagen, G.4    Stevenin, J.5    Pommier, Y.6    Tazi, J.7
  • 19
    • 13044316665 scopus 로고    scopus 로고
    • Dynamic molecular combing: Stretching the whole human genome for high-resolution studies
    • Michalet X, Ekong R, Fougerousse F, Rousseaux S, Schurra C, Hornigold N, et al. Dynamic molecular combing: stretching the whole human genome for high-resolution studies. Science 1997; 277:1518-23.
    • (1997) Science , vol.277 , pp. 1518-1523
    • Michalet, X.1    Ekong, R.2    Fougerousse, F.3    Rousseaux, S.4    Schurra, C.5    Hornigold, N.6
  • 20
    • 77649231570 scopus 로고    scopus 로고
    • Defining replication origin efficiency using DNA fiber assays
    • in press
    • Tuduri S, Tourriere H, Pasero P. Defining replication origin efficiency using DNA fiber assays. Chromosome Res 2010; in press.
    • (2010) Chromosome Res
    • Tuduri, S.1    Tourriere, H.2    Pasero, P.3
  • 21
    • 0032861343 scopus 로고    scopus 로고
    • Megabase chromatin domains involved in DNA double-strand breaks in vivo
    • Rogakou EP, Boon C, Redon C, Bonner WM. Megabase chromatin domains involved in DNA double-strand breaks in vivo. J Cell Biol 1999; 146:905-16.
    • (1999) J Cell Biol , vol.146 , pp. 905-916
    • Rogakou, E.P.1    Boon, C.2    Redon, C.3    Bonner, W.M.4
  • 22
    • 34547626213 scopus 로고    scopus 로고
    • Top1- And Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation
    • DOI 10.1101/gad.432107
    • Bermejo R, Doksani Y, Capra T, Katou Y-M, Tanaka H, Shirahige K, et al. Top1- and Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation. Genes Dev 2007; 21:1921-36. (Pubitemid 47204931)
    • (2007) Genes and Development , vol.21 , Issue.15 , pp. 1921-1936
    • Bermejo, R.1    Doksani, Y.2    Capra, T.3    Katou, Y.-M.4    Tanaka, H.5    Shirahige, K.6    Foiani, M.7
  • 23
    • 23744455164 scopus 로고    scopus 로고
    • Inactivation of the SR protein splicing factor ASF/SF2 results in genomic instability
    • DOI 10.1016/j.cell.2005.06.008, PII S0092867405005544
    • Li X, Manley JL. Inactivation of the SR Protein Splicing Factor ASF/SF2 Results in Genomic Instability. Cell 2005; 122:365-78. (Pubitemid 41127139)
    • (2005) Cell , vol.122 , Issue.3 , pp. 365-378
    • Li, X.1    Manley, J.L.2
  • 24
    • 67651119997 scopus 로고    scopus 로고
    • A genome-wide siRNA screen reveals diverse cellular processes and pathways that mediate genome stability
    • Paulsen RD, Soni DV, Wollman R, Hahn AT, Yee MC, Guan A, et al. A genome-wide siRNA screen reveals diverse cellular processes and pathways that mediate genome stability. Mol Cell 2009; 35:228-39.
    • (2009) Mol Cell , vol.35 , pp. 228-239
    • Paulsen, R.D.1    Soni, D.V.2    Wollman, R.3    Hahn, A.T.4    Yee, M.C.5    Guan, A.6
  • 25
    • 33646106590 scopus 로고    scopus 로고
    • GammaH2AX and MDC1: Anchoring the DNA-damage-response machinery to broken chromosomes
    • Amst
    • Stucki M, Jackson SP. GammaH2AX and MDC1: anchoring the DNA-damage-response machinery to broken chromosomes. DNA Repair (Amst) 2006; 5:534-43.
    • (2006) DNA Repair , vol.5 , pp. 534-543
    • Stucki, M.1    Jackson, S.P.2
  • 26
    • 37349109667 scopus 로고    scopus 로고
    • A DNA Replication Mechanism for Generating Nonrecurrent Rearrangements Associated with Genomic Disorders
    • Lee JA, Carvalho CMB, Lupski JR. A DNA Replication Mechanism for Generating Nonrecurrent Rearrangements Associated with Genomic Disorders. Cell 2007; 131:1235-47.
    • (2007) Cell , vol.131 , pp. 1235-1247
    • Lee, J.A.1    Carvalho, C.M.B.2    Lupski, J.R.3
  • 27
    • 52949143512 scopus 로고    scopus 로고
    • Segmental Duplications Arise from Pol32-Dependent Repair of Broken Forks through Two Alternative Replication-Based Mechanisms
    • Payen C, Koszul R, Dujon B, Fischer G. Segmental Duplications Arise from Pol32-Dependent Repair of Broken Forks through Two Alternative Replication-Based Mechanisms. PLoS Genet 2008; 4:1000175.
    • (2008) PLoS Genet , vol.4 , pp. 1000175
    • Payen, C.1    Koszul, R.2    Dujon, B.3    Fischer, G.4
  • 28
    • 59249105978 scopus 로고    scopus 로고
    • A microhomology-mediated break-induced replication model for the origin of human copy number variation
    • Hastings PJ, Ira G, Lupski JR. A microhomology-mediated break-induced replication model for the origin of human copy number variation. PLoS Genet 2009; 5:1000327.
    • (2009) PLoS Genet , vol.5 , pp. 1000327
    • Hastings, P.J.1    Ira, G.2    Lupski, J.R.3
  • 29
    • 72849116104 scopus 로고    scopus 로고
    • Fusion of nearby inverted repeats by a replication-based mechanism leads to formation of dicentric and acentric chromosomes that cause genome instability in budding yeast
    • Paek AL, Kaochar S, Jones H, Elezaby A, Shanks L, Weinert T. Fusion of nearby inverted repeats by a replication-based mechanism leads to formation of dicentric and acentric chromosomes that cause genome instability in budding yeast. Genes Dev 2009; 23:2861-75.
    • (2009) Genes Dev , vol.23 , pp. 2861-2875
    • Paek, A.L.1    Kaochar, S.2    Jones, H.3    Elezaby, A.4    Shanks, L.5    Weinert, T.6
  • 30
    • 72849150228 scopus 로고    scopus 로고
    • Nearby inverted repeats fuse to generate acentric and dicentric palindromic chromosomes by a replication template exchange mechanism
    • Mizuno K, Lambert S, Baldacci G, Murray JM, Carr AM. Nearby inverted repeats fuse to generate acentric and dicentric palindromic chromosomes by a replication template exchange mechanism. Genes Dev 2009; 23:2876-86.
    • (2009) Genes Dev , vol.23 , pp. 2876-2886
    • Mizuno, K.1    Lambert, S.2    Baldacci, G.3    Murray, J.M.4    Carr, A.M.5
  • 31
    • 0036429193 scopus 로고    scopus 로고
    • The human and mouse replication-dependent histone genes
    • DOI 10.1016/S0888-7543(02)96850-3
    • Marzluff WF, Gongidi P, Woods KR, Jin J, Maltais LJ. The human and mouse replication-dependent histone genes. Genomics 2002; 80:487-98. (Pubitemid 35333791)
    • (2002) Genomics , vol.80 , Issue.5 , pp. 487-498
    • Marzluff, W.F.1    Gongidi, P.2    Woods, K.R.3    Jin, J.4    Maltais, L.J.5
  • 32
    • 27844577762 scopus 로고    scopus 로고
    • Coordinate Control and Selective Expression of the Full Complement of Replication-dependent Histone H4 Genes in Normal and Cancer Cells
    • Holmes WF, Braastad CD, Mitra P, Hampe C, Doenecke D, Albig W, et al. Coordinate Control and Selective Expression of the Full Complement of Replication-dependent Histone H4 Genes in Normal and Cancer Cells. J Biol Chem 2005; 280:37400-7.
    • (2005) J Biol Chem , vol.280 , pp. 37400-37407
    • Holmes, W.F.1    Braastad, C.D.2    Mitra, P.3    Hampe, C.4    Doenecke, D.5    Albig, W.6
  • 34
    • 76049125030 scopus 로고    scopus 로고
    • AID-induced decrease in topoisomerase 1 induces DNA structural alteration and DNA cleavage for class switch recombination
    • Kobayashi M, Aida M, Nagaoka H, Begum NA, Kitawaki Y, Nakata M, et al. AID-induced decrease in topoisomerase 1 induces DNA structural alteration and DNA cleavage for class switch recombination. Proc Natl Acad Sci USA 2009.
    • (2009) Proc Natl Acad Sci USA
    • Kobayashi, M.1    Aida, M.2    Nagaoka, H.3    Begum, N.A.4    Kitawaki, Y.5    Nakata, M.6
  • 35
    • 37549036739 scopus 로고    scopus 로고
    • Mechanism of R-loop formation at immunoglobulin class switch sequences
    • Roy D, Yu K, Lieber MR. Mechanism of R-loop formation at immunoglobulin class switch sequences. Mol Cell Biol 2008; 28:50-60.
    • (2008) Mol Cell Biol , vol.28 , pp. 50-60
    • Roy, D.1    Yu, K.2    Lieber, M.R.3
  • 36
    • 71249101060 scopus 로고    scopus 로고
    • Nuclear receptor-induced chromosomal proximity and DNA breaks underlie specific translocations in cancer
    • Lin C, Yang L, Tanasa B, Hutt K, Ju BG, Ohgi K, et al. Nuclear receptor-induced chromosomal proximity and DNA breaks underlie specific translocations in cancer. Cell 2009; 139:1069-83.
    • (2009) Cell , vol.139 , pp. 1069-1083
    • Lin, C.1    Yang, L.2    Tanasa, B.3    Hutt, K.4    Ju, B.G.5    Ohgi, K.6
  • 37
    • 70449641054 scopus 로고    scopus 로고
    • AID produces DNA double-strand breaks in non-Ig genes and mature B cell lymphomas with reciprocal chromosome translocations
    • Robbiani DF, Bunting S, Feldhahn N, Bothmer A, Camps J, Deroubaix S, et al. AID produces DNA double-strand breaks in non-Ig genes and mature B cell lymphomas with reciprocal chromosome translocations. Mol Cell 2009; 36:631-41.
    • (2009) Mol Cell , vol.36 , pp. 631-641
    • Robbiani, D.F.1    Bunting, S.2    Feldhahn, N.3    Bothmer, A.4    Camps, J.5    Deroubaix, S.6
  • 38
    • 0030904279 scopus 로고    scopus 로고
    • Expression of fragile sites triggers intrachromosomal mammalian gene amplification and sets boundaries to early amplicons
    • Coquelle A, Pipiras E, Toledo F, Buttin G, Debatisse M. Expression of fragile sites triggers intrachromosomal mammalian gene amplification and sets boundaries to early amplicons. Cell 1997; 89:215-25. (Pubitemid 27199894)
    • (1997) Cell , vol.89 , Issue.2 , pp. 215-225
    • Coquelle, A.1    Pipiras, E.2    Toledo, F.3    Buttin, G.4    Debatisse, M.5
  • 40
    • 33749384368 scopus 로고    scopus 로고
    • Common fragile sites are conserved features of human and mouse chromosomes and relate to large active genes
    • Helmrich A, Stout-Weider K, Hermann K, Schrock E, Heiden T. Common fragile sites are conserved features of human and mouse chromosomes and relate to large active genes. Genome Res 2006; 16:1222-30.
    • (2006) Genome Res , vol.16 , pp. 1222-1230
    • Helmrich, A.1    Stout-Weider, K.2    Hermann, K.3    Schrock, E.4    Heiden, T.5
  • 41
    • 0036278984 scopus 로고    scopus 로고
    • The yeast CDK inhibitor Sic1 prevents genomic instability by promoting replication origin licensing in late G(1)
    • Lengronne A, Schwob E. The yeast CDK inhibitor Sic1 prevents genomic instability by promoting replication origin licensing in late G(1). Mol Cell 2002; 9:1067-78.
    • (2002) Mol Cell , vol.9 , pp. 1067-1078
    • Lengronne, A.1    Schwob, E.2
  • 43
    • 8844281561 scopus 로고    scopus 로고
    • Separation methods of quinonoid constituents of plants used in Oriental traditional medicines
    • Hazra B, Das Sarma M and Sanyal U. Separation methods of quinonoid constituents of plants used in Oriental traditional medicines. Journal of Chromatography B 2004; 812:259-75.
    • (2004) Journal of Chromatography B , vol.812 , pp. 259-275
    • Hazra, B.1    Das Sarma, M.2    Sanyal, U.3


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