-
1
-
-
0036212917
-
Molecular mechanism of class switch recombination: Linkage with somatic hypermutation
-
Honjo T, Kinoshita K, Muramatsu M (2002) Molecular mechanism of class switch recombination: Linkage with somatic hypermutation. Annu Rev Immunol 20:165-196.
-
(2002)
Annu Rev Immunol
, vol.20
, pp. 165-196
-
-
Honjo, T.1
Kinoshita, K.2
Muramatsu, M.3
-
3
-
-
34249907843
-
Non-B DNA conformations, mutagenesis and disease
-
Wells RD (2007) Non-B DNA conformations, mutagenesis and disease. Trends Biochem Sci 32:271-278.
-
(2007)
Trends Biochem Sci
, vol.32
, pp. 271-278
-
-
Wells, R.D.1
-
4
-
-
0023020765
-
Secondary genomic rearrangement events in pre-B cells: VHDJH replacement by a LINE-1 sequence and directed class switching
-
Yancopoulos GD, et al. (1986) Secondary genomic rearrangement events in pre-B cells: VHDJH replacement by a LINE-1 sequence and directed class switching. EMBO J 5:3259-3266.
-
(1986)
EMBO J
, vol.5
, pp. 3259-3266
-
-
Yancopoulos, G.D.1
-
5
-
-
0022599997
-
Specificity of immunoglobulin heavy chain switch correlates with activity of germline heavy chain genes prior to switching
-
Stavnezer-Nordgren J, Sirlin S (1986) Specificity of immunoglobulin heavy chain switch correlates with activity of germline heavy chain genes prior to switching.EMBOJ 5:95-102.
-
(1986)
EMBOJ
, vol.5
, pp. 95-102
-
-
Stavnezer-Nordgren, J.1
Sirlin, S.2
-
6
-
-
37549036739
-
Mechanism of R-loop formation at immunoglobulin class switch sequences
-
LieberMR
-
Roy D, Yu K, LieberMR(2008) Mechanism of R-loop formation at immunoglobulin class switch sequences. Mol Cell Biol 28:50-60.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 50-60
-
-
Roy, D.1
Yu, K.2
-
7
-
-
34547873538
-
Sequence dependence of chromosomal R-loops at the immunoglobulin heavy-chain Smu class switch region
-
Huang FT, et al. (2007) Sequence dependence of chromosomal R-loops at the immunoglobulin heavy-chain Smu class switch region. Mol Cell Biol 27:5921-5932.
-
(2007)
Mol Cell Biol
, vol.27
, pp. 5921-5932
-
-
Huang, F.T.1
-
8
-
-
65449166076
-
Conformational variants of duplex DNA correlated with cytosinerich chromosomal fragile sites
-
Tsai AG, et al. (2009) Conformational variants of duplex DNA correlated with cytosinerich chromosomal fragile sites. J Biol Chem 284:7157-7164.
-
(2009)
J Biol Chem
, vol.284
, pp. 7157-7164
-
-
Tsai, A.G.1
-
9
-
-
20744431751
-
Evidence for a triplex DNA conformation at the bcl-2 major breakpoint region of the t(14;18) translocation
-
Raghavan SC, et al. (2005) Evidence for a triplex DNA conformation at the bcl-2 major breakpoint region of the t(14;18) translocation. J Biol Chem 280:22749-22760.
-
(2005)
J Biol Chem
, vol.280
, pp. 22749-22760
-
-
Raghavan, S.C.1
-
10
-
-
0023904210
-
Non-B right-handed DNA conformations of homopurine.homopyrimidine sequences in the murine immunoglobulin C alpha switch region
-
Collier DA, Griffin JA, Wells RD (1988) Non-B right-handed DNA conformations of homopurine.homopyrimidine sequences in the murine immunoglobulin C alpha switch region. J Biol Chem 263:7397-7405.
-
(1988)
J Biol Chem
, vol.263
, pp. 7397-7405
-
-
Collier, D.A.1
Griffin, J.A.2
Wells, R.D.3
-
11
-
-
0035923592
-
Variable deletion and duplication at recombination junction ends: Implication for staggered double-strand cleavage in class-switch recombination
-
Chen X, Kinoshita K, Honjo T (2001) Variable deletion and duplication at recombination junction ends: Implication for staggered double-strand cleavage in class-switch recombination. Proc Natl Acad Sci USA 98:13860-13865.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 13860-13865
-
-
Chen, X.1
Kinoshita, K.2
Honjo, T.3
-
12
-
-
0037108463
-
Immunoglobulin isotype switching is inhibited and somatic hypermutation perturbed in UNG-deficient mice
-
Rada C, et al. (2002) Immunoglobulin isotype switching is inhibited and somatic hypermutation perturbed in UNG-deficient mice. Curr Biol 12:1748-1755.
-
(2002)
Curr Biol
, vol.12
, pp. 1748-1755
-
-
Rada, C.1
-
13
-
-
0037019315
-
AID mutates E. coli suggesting a DNA deamination mechanism for antibody diversification
-
Petersen-Mahrt SK, Harris RS, Neuberger MS (2002) AID mutates E. coli suggesting a DNA deamination mechanism for antibody diversification. Nature 418:99-103.
-
(2002)
Nature
, vol.418
, pp. 99-103
-
-
Petersen-Mahrt, S.K.1
Harris, R.S.2
Neuberger, M.S.3
-
14
-
-
70349483915
-
Apex2 is required for efficient somatic hypermutation but not for class switch recombination of immunoglobulin genes
-
Sabouri Z, et al. (2009) Apex2 is required for efficient somatic hypermutation but not for class switch recombination of immunoglobulin genes. Int Immunol 21:947-955.
-
(2009)
Int Immunol
, vol.21
, pp. 947-955
-
-
Sabouri, Z.1
-
15
-
-
33749034730
-
Topoisomerase I inhibitors: Camptothecins and beyond
-
Pommier Y (2006) Topoisomerase I inhibitors: Camptothecins and beyond. Nat Rev Cancer 6:789-802.
-
(2006)
Nat Rev Cancer
, vol.6
, pp. 789-802
-
-
Pommier, Y.1
-
16
-
-
0035928802
-
A structural model for the ternary cleavable complex formed between human topoisomerase I, DNA, and camptothecin
-
Kerrigan JE, Pilch DS (2001) A structural model for the ternary cleavable complex formed between human topoisomerase I, DNA, and camptothecin. Biochemistry 40:9792-9798.
-
(2001)
Biochemistry
, vol.40
, pp. 9792-9798
-
-
Kerrigan, J.E.1
Pilch, D.S.2
-
17
-
-
34548763143
-
Nonclassic functions of human topoisomerase I: Genome-wide and pharmacologic analyses
-
Miao ZH, et al. (2007) Nonclassic functions of human topoisomerase I: Genome-wide and pharmacologic analyses. Cancer Res 67:8752-8761.
-
(2007)
Cancer Res
, vol.67
, pp. 8752-8761
-
-
Miao, Z.H.1
-
18
-
-
0034268780
-
Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme
-
Muramatsu M, et al. (2000) Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme. Cell 102:553-563.
-
(2000)
Cell
, vol.102
, pp. 553-563
-
-
Muramatsu, M.1
-
19
-
-
0034264851
-
Activation-induced cytidine deaminase (AID) deficiency causes the autosomal recessive form of the Hyper-IgM syndrome (HIGM2)
-
Revy P, et al. (2000) Activation-induced cytidine deaminase (AID) deficiency causes the autosomal recessive form of the Hyper-IgM syndrome (HIGM2). Cell 102:565-575.
-
(2000)
Cell
, vol.102
, pp. 565-575
-
-
Revy, P.1
-
20
-
-
62449089909
-
The C-terminal region of activation-induced cytidine deaminase is responsible for a recombination function other than DNA cleavage in class switch recombination
-
Doi T, et al. (2009) The C-terminal region of activation-induced cytidine deaminase is responsible for a recombination function other than DNA cleavage in class switch recombination. Proc Natl Acad Sci USA 106:2758-2763.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 2758-2763
-
-
Doi, T.1
-
21
-
-
0037881911
-
Constitutive expression of AID leads to tumorigenesis
-
Okazaki IM, et al. (2003) Constitutive expression of AID leads to tumorigenesis. J Exp Med 197:1173-1181.
-
(2003)
J Exp Med
, vol.197
, pp. 1173-1181
-
-
Okazaki, I.M.1
-
22
-
-
39149099085
-
Two levels of protection for the B cell genome during somatic hypermutation
-
Liu M, et al. (2008) Two levels of protection for the B cell genome during somatic hypermutation. Nature 451:841-845.
-
(2008)
Nature
, vol.451
, pp. 841-845
-
-
Liu, M.1
-
23
-
-
33644643189
-
Role of genomic instability and p53 in AID-induced c-myc-Igh translocations
-
Ramiro AR, et al. (2006) Role of genomic instability and p53 in AID-induced c-myc-Igh translocations. Nature 440:105-109.
-
(2006)
Nature
, vol.440
, pp. 105-109
-
-
Ramiro, A.R.1
-
24
-
-
0035940511
-
Ahallmark of active class switch recombination: Transcripts directed by I promoters on looped-out circular DNAs
-
Kinoshita K, Harigai M, Fagarasan S, Muramatsu M, Honjo T (2001)Ahallmark of active class switch recombination: Transcripts directed by I promoters on looped-out circular DNAs. Proc Natl Acad Sci USA 98:12620-12623.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 12620-12623
-
-
Kinoshita, K.1
Harigai, M.2
Fagarasan, S.3
Muramatsu, M.4
Honjo, T.5
-
25
-
-
0037418279
-
De novo protein synthesis is required for the activation-induced cytidine deaminase function in class-switch recombination
-
Doi T, Kinoshita K, Ikegawa M, Muramatsu M, Honjo T (2003) De novo protein synthesis is required for the activation-induced cytidine deaminase function in class-switch recombination. Proc Natl Acad Sci USA 100:2634-2638.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 2634-2638
-
-
Doi, T.1
Kinoshita, K.2
Ikegawa, M.3
Muramatsu, M.4
Honjo, T.5
-
26
-
-
0026636784
-
Quantitation of immunoglobulin mu-gamma 1 heavy chain switch region recombination by a digestion-circularization polymerase chain reaction method
-
ChuCC, Paul WE, Max EE (1992) Quantitation of immunoglobulin mu-gamma 1 heavy chain switch region recombination by a digestion-circularization polymerase chain reaction method. Proc Natl Acad Sci USA 89:6978-6982.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 6978-6982
-
-
Chu, C.C.1
Paul, W.E.2
Max, E.E.3
-
27
-
-
0035818990
-
AID is required to initiate Nbs1/gamma-H2AX focus formation and mutations at sites of class switching
-
Petersen S, et al. (2001) AID is required to initiate Nbs1/gamma-H2AX focus formation and mutations at sites of class switching. Nature 414:660-665.
-
(2001)
Nature
, vol.414
, pp. 660-665
-
-
Petersen, S.1
-
28
-
-
0034820028
-
Directed evolution to increase camptothecin sensitivity of human DNA topoisomerase I
-
Scaldaferro S, Tinelli S, Borgnetto ME, Azzini A, Capranico G (2001) Directed evolution to increase camptothecin sensitivity of human DNA topoisomerase I. Chem Biol 8:871-881.
-
(2001)
Chem Biol
, vol.8
, pp. 871-881
-
-
Scaldaferro, S.1
Tinelli, S.2
Borgnetto, M.E.3
Azzini, A.4
Capranico, G.5
-
29
-
-
2542490127
-
Distinct effects of topoisomerase I and RNA polymerase I inhibitors suggest a dual mechanism of nucleolar/nucleoplasmic partitioning of topoisomerase I
-
Christensen MO, et al. (2004) Distinct effects of topoisomerase I and RNA polymerase I inhibitors suggest a dual mechanism of nucleolar/nucleoplasmic partitioning of topoisomerase I. J Biol Chem 279:21873-21882.
-
(2004)
J Biol Chem
, vol.279
, pp. 21873-21882
-
-
Christensen, M.O.1
-
30
-
-
0022067647
-
Eukaryotic type I topoisomerase is enriched in the nucleolus and catalytically active on ribosomal DNA
-
Muller MT, Pfund WP, Mehta VB, Trask DK (1985) Eukaryotic type I topoisomerase is enriched in the nucleolus and catalytically active on ribosomal DNA. EMBO J 4:1237-1243.
-
(1985)
EMBO J
, vol.4
, pp. 1237-1243
-
-
Muller, M.T.1
Pfund, W.P.2
Mehta, V.B.3
Trask, D.K.4
-
31
-
-
63649100364
-
Cdc2-like kinases and DNA topoisomerase I regulate alternative splicing of tissue factor in human endothelial cells
-
Eisenreich A, et al. (2009) Cdc2-like kinases and DNA topoisomerase I regulate alternative splicing of tissue factor in human endothelial cells. Circ Res 104:589-599.
-
(2009)
Circ Res
, vol.104
, pp. 589-599
-
-
Eisenreich, A.1
-
32
-
-
23744455164
-
Inactivation of the SR protein splicing factor ASF/SF2 results in genomic instability
-
Li X, Manley JL (2005) Inactivation of the SR protein splicing factor ASF/SF2 results in genomic instability. Cell 122:365-378.
-
(2005)
Cell
, vol.122
, pp. 365-378
-
-
Li, X.1
Manley, J.L.2
-
33
-
-
0034671853
-
Interaction of human DNA topoisomerase I with G-quartet structures
-
Arimondo PB, et al. (2000) Interaction of human DNA topoisomerase I with G-quartet structures. Nucleic Acids Res 28:4832-4838.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 4832-4838
-
-
Arimondo, P.B.1
-
34
-
-
0032528003
-
Binding characteristics of Ustilago maydis topoisomerase I to DNA containing secondary structures
-
Thiyagarajan MM, Waldman SA, Noe M, Kmiec EB (1998) Binding characteristics of Ustilago maydis topoisomerase I to DNA containing secondary structures. Eur J Biochem 255:347-355.
-
(1998)
Eur J Biochem
, vol.255
, pp. 347-355
-
-
Thiyagarajan, M.M.1
Waldman, S.A.2
Noe, M.3
Kmiec, E.B.4
|